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ONTOLOGY REPORT - ANNOTATIONS


Term:vacuolar membrane
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Accession:GO:0005774 term browser browse the term
Definition:The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.


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vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB6 ATP binding cassette subfamily B member 6 (Langereis blood group) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:121,246,180...121,254,350
Ensembl chr15:121,246,186...121,254,332
JBrowse link
G ARL8A ADP ribosylation factor like GTPase 8A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,314,929...24,324,225
Ensembl chr10:24,314,932...24,324,229
JBrowse link
G ARL8B ADP ribosylation factor like GTPase 8B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,659...61,720,719
JBrowse link
G ATP6V0C ATPase H+ transporting V0 subunit c IEA UniProt GO_REF:0000044 NCBI chr 3:39,532,707...39,538,704 JBrowse link
G ATP6V1A ATPase H+ transporting V1 subunit A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:146,128,664...146,165,269
Ensembl chr13:146,121,759...146,192,442
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,208
JBrowse link
G MAN2B1 mannosidase alpha class 2B member 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:66,329,051...66,347,051 JBrowse link
G MAN2B2 mannosidase alpha class 2B member 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:4,123,151...4,181,196
Ensembl chr 8:4,129,643...4,181,212
JBrowse link
G MTMR2 myotubularin related protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:27,864,335...27,974,448
Ensembl chr 9:27,854,491...27,974,423
JBrowse link
G NAPA NSF attachment protein alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:53,249,330...53,275,304
Ensembl chr 6:53,238,678...53,275,230
JBrowse link
G NAPB NSF attachment protein beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:30,361,439...30,396,105
Ensembl chr17:30,359,420...30,396,078
JBrowse link
G NAPG NSF attachment protein gamma IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:97,961,307...97,974,974
Ensembl chr 6:97,961,308...97,974,636
JBrowse link
G SBF2 SET binding factor 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:49,242,739...49,691,807
Ensembl chr 2:49,242,734...49,705,387
JBrowse link
G SLC3A1 solute carrier family 3 member 1 ISO RGD PMID:9987991 RGD:1600019 NCBI chr 3:96,157,387...96,201,057
Ensembl chr 3:96,157,380...96,215,454
JBrowse link
G THBD thrombomodulin ISO RGD PMID:9272431 RGD:11038714 NCBI chr17:30,219,870...30,223,499
Ensembl chr17:30,221,819...30,230,177
JBrowse link
G TMEM138 transmembrane protein 138 IEA UniProt GO_REF:0000044 NCBI chr 2:10,134,866...10,143,049
Ensembl chr 2:10,131,633...10,143,038
JBrowse link
G VAC14 VAC14 component of PIKFYVE complex IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,683,800...13,791,246
Ensembl chr 6:13,683,799...13,791,241
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A ISO (PMID:10637304) UniProtKB PMID:10637304 NCBI chr 6:17,657,792...17,669,560 JBrowse link
autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:133,651,294...133,693,472
Ensembl chr15:133,651,286...133,706,038
JBrowse link
G ATG16L2 autophagy related 16 like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:7,346,973...7,360,189
Ensembl chr 9:7,347,001...7,365,627
JBrowse link
G ATG9A autophagy related 9A NOT ISO
IEA
(PMID:22456507) MGI
UniProt
PMID:22456507 GO_REF:0000044 NCBI chr15:121,254,355...121,265,564
Ensembl chr15:121,254,355...121,282,516
JBrowse link
G ATG9B autophagy related 9B IEA UniProt GO_REF:0000044 NCBI chr18:6,200,246...6,208,988
Ensembl chr18:6,200,639...6,208,286
JBrowse link
G ATP6AP2 ATPase H+ transporting accessory protein 2 IEA UniProt GO_REF:0000044 NCBI chr  X:36,271,154...36,300,240
Ensembl chr  X:36,271,223...36,304,183
JBrowse link
G GABARAP GABA type A receptor-associated protein ISO (PMID:15169837) UniProtKB PMID:15169837 NCBI chr12:52,596,130...52,598,166
Ensembl chr12:52,597,083...52,598,194
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,757,488...61,767,593
JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:12,122,219...12,132,986
Ensembl chr 6:12,105,658...12,132,990
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 ISO (MGI:MGI:6323456|PMID:31006538) MGI PMID:31006538 MGI:MGI:6323456 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615
JBrowse link
G LOC102158581 gamma-aminobutyric acid receptor-associated protein pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,675,741...76,676,338 JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,957,830...37,959,505
Ensembl chr17:37,957,507...37,959,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:1,919,879...1,941,069
Ensembl chr 6:1,915,387...1,941,077
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:15,371,182...15,379,067
Ensembl chr10:15,372,879...15,382,939
JBrowse link
G PRKD1 protein kinase D1 ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chr 7:69,527,743...69,872,374
Ensembl chr 7:69,527,910...69,872,865
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 ISO (MGI:MGI:6323456|PMID:31006538) MGI PMID:31006538 MGI:MGI:6323456 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,338...77,649,550
JBrowse link
G RPN2 ribophorin II ISO RGD PMID:2351689 RGD:2325969 NCBI chr17:40,322,364...40,378,866
Ensembl chr17:40,322,394...40,378,857
JBrowse link
G RUBCNL rubicon like autophagy enhancer IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:20,995,439...21,036,429
Ensembl chr11:20,995,898...21,036,417
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 IEA UniProt GO_REF:0000044 NCBI chr 4:129,361,596...129,395,790
Ensembl chr 4:129,357,548...129,395,583
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 IEA UniProt GO_REF:0000044 NCBI chr 2:141,359,402...141,367,222
Ensembl chr 2:141,358,993...141,367,198
JBrowse link
G STX17 syntaxin 17 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:241,657,463...241,785,270
Ensembl chr 1:241,657,506...241,765,783
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 IEA UniProt GO_REF:0000044 NCBI chr 3:5,414,071...5,442,953
Ensembl chr 3:5,414,073...5,442,943
JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor IEA Ensembl GO_REF:0000107 NCBI chr13:33,892,557...33,924,175
Ensembl chr13:33,771,816...33,926,156
JBrowse link
G UVRAG UV radiation resistance associated IEA Ensembl GO_REF:0000107 NCBI chr 9:10,088,779...10,370,857
Ensembl chr 9:10,088,798...10,369,037
JBrowse link
G WDR81 WD repeat domain 81 IEA Ensembl GO_REF:0000107 NCBI chr12:47,921,818...47,933,782
Ensembl chr12:47,922,002...47,933,780
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 IEA Ensembl GO_REF:0000107 NCBI chr12:11,715,332...11,752,009
Ensembl chr12:11,715,318...11,752,021
JBrowse link
azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZU1 azurocidin 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,530,692...77,533,880
Ensembl chr 2:77,530,695...77,533,643
JBrowse link
G VAMP1 vesicle associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chr 5:64,181,496...64,188,275 JBrowse link
G VAMP7 vesicle associated membrane protein 7 IEA Ensembl GO_REF:0000107 NCBI chr  X:125,863,266...125,917,232
Ensembl chr  X:125,863,291...125,917,227
JBrowse link
G VAMP8 vesicle associated membrane protein 8 IEA Ensembl GO_REF:0000107 NCBI chr 3:59,187,900...59,193,165 JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP2 lysosomal associated membrane protein 2 ISO (PMID:8662539) ParkinsonsUK-UCL PMID:8662539 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:59,969,806...60,072,976
Ensembl chr 5:59,970,260...60,072,940
JBrowse link
G CDIP1 cell death inducing p53 target 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:37,815,259...37,839,266
Ensembl chr 3:37,815,370...37,844,608
JBrowse link
G GFAP glial fibrillary acidic protein ISO PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,468,898
JBrowse link
G LITAF lipopolysaccharide induced TNF factor IEA Ensembl GO_REF:0000107 NCBI chr 3:31,482,605...31,576,211
Ensembl chr 3:31,482,353...31,579,082
JBrowse link
EGO complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYCBP MYC binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:94,805,649...94,814,443
Ensembl chr 6:94,785,910...94,814,537
JBrowse link
G RRAGA Ras related GTP binding A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:203,772,063...203,774,580
Ensembl chr 1:203,772,759...203,774,577
JBrowse link
G RRAGB Ras related GTP binding B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:48,286,584...48,330,196
Ensembl chr  X:48,286,592...48,330,195
JBrowse link
G RRAGC Ras related GTP binding C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:94,785,906...94,803,017
Ensembl chr 6:94,785,910...94,814,537
JBrowse link
G RRAGD Ras related GTP binding D IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:57,374,047...57,424,058
Ensembl chr 1:57,374,051...57,424,061
JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 3:31,938,133...32,158,343
Ensembl chr 3:31,938,135...32,158,558
JBrowse link
G SLC15A4 solute carrier family 15 member 4 IEA Ensembl GO_REF:0000107 NCBI chr14:26,122,362...26,154,414
Ensembl chr14:26,122,363...26,154,786
JBrowse link
G TASL TLR adaptor interacting with endolysosomal SLC15A4 IEA Ensembl GO_REF:0000107 NCBI chr  X:26,363,808...26,384,933
Ensembl chr  X:26,363,810...26,393,041
JBrowse link
extrinsic component of autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ULK1 unc-51 like autophagy activating kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,696...23,448,138
JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 8:133,665,585...133,939,860
Ensembl chr 8:133,665,520...133,937,221
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,420...71,886,581
JBrowse link
extrinsic component of vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAC14 VAC14 component of PIKFYVE complex IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,683,800...13,791,246
Ensembl chr 6:13,683,799...13,791,241
JBrowse link
integral component of autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IEA Ensembl GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP13A2 ATPase cation transporting 13A2 IEA Ensembl GO_REF:0000107 NCBI chr 6:75,618,317...75,638,591
Ensembl chr 6:75,618,416...75,638,591
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 6:108,403,126...108,450,486
Ensembl chr 6:108,402,877...108,450,990
JBrowse link
G SLC15A4 solute carrier family 15 member 4 IEA Ensembl GO_REF:0000107 NCBI chr14:26,122,362...26,154,414
Ensembl chr14:26,122,363...26,154,786
JBrowse link
G SLC38A9 solute carrier family 38 member 9 IEA Ensembl GO_REF:0000107 NCBI chr16:34,639,575...34,858,827
Ensembl chr16:34,738,194...34,858,735
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr14:29,895,752...29,935,571
Ensembl chr14:29,895,770...29,935,563
JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ABCD4 ATP binding cassette subfamily D member 4 IEA Ensembl GO_REF:0000107 NCBI chr 7:97,568,193...97,585,693
Ensembl chr 7:97,567,712...97,585,679
JBrowse link
G ABHD6 abhydrolase domain containing 6, acylglycerol lipase IEA Ensembl GO_REF:0000107 NCBI chr13:39,982,536...40,055,467
Ensembl chr13:40,009,737...40,055,490
JBrowse link
G ANXA2 annexin A2 IEA Ensembl GO_REF:0000107 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,064
JBrowse link
G ANXA6 annexin A6 IEA Ensembl GO_REF:0000107 NCBI chr16:71,857,229...71,913,723
Ensembl chr16:71,857,258...71,913,723
JBrowse link
G AP5M1 adaptor related protein complex 5 subunit mu 1 IEA UniProt GO_REF:0000044 NCBI chr 1:186,430,154...186,464,347
Ensembl chr 1:186,430,227...186,461,319
JBrowse link
G ARL8A ADP ribosylation factor like GTPase 8A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,314,929...24,324,225
Ensembl chr10:24,314,932...24,324,229
JBrowse link
G ARL8B ADP ribosylation factor like GTPase 8B colocalizes_with IBA
ISO
(PMID:21873635)
(PMID:25898167)
GO_Central
UniProtKB
PMID:21873635, PMID:25898167 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,659...61,720,719
JBrowse link
G ATP13A2 ATPase cation transporting 13A2 ISO (PMID:23499937) ParkinsonsUK-UCL PMID:23499937 NCBI chr 6:75,618,317...75,638,591
Ensembl chr 6:75,618,416...75,638,591
JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:28,090,180...28,132,080
Ensembl chr 6:28,090,181...28,131,985
JBrowse link
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:50,694,188...50,749,373
Ensembl chr 4:50,694,189...50,749,378
JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 ISO (MGI:MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:MGI:2387737 NCBI chr 1:255,151,909...255,159,299
Ensembl chr 1:255,151,913...255,195,278
JBrowse link
G ATRAID all-trans retinoic acid induced differentiation factor IEA Ensembl GO_REF:0000107 NCBI chr 3:111,914,710...111,919,766 JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 IEA UniProt GO_REF:0000044 NCBI chr 5:21,156,460...21,160,738
Ensembl chr 5:21,147,767...21,160,738
JBrowse link
G BORCS8 BLOC-1 related complex subunit 8 IEA UniProt GO_REF:0000044 NCBI chr 2:58,684,508...58,696,586 JBrowse link
G BRI3 brain protein I3 IEA UniProt GO_REF:0000044 NCBI chr 3:5,463,609...5,471,398
Ensembl chr 3:5,463,675...5,471,391
JBrowse link
G CCZ1 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated IEA UniProt GO_REF:0000044 NCBI chr 3:5,201,228...5,228,594 JBrowse link
G CD63 CD63 molecule IEA UniProt GO_REF:0000044 NCBI chr 5:21,172,275...21,176,225
Ensembl chr 5:21,171,678...21,176,232
JBrowse link
G CD68 CD68 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:52,874,754...52,877,256
Ensembl chr12:52,874,785...52,877,695
JBrowse link
G CDIP1 cell death inducing p53 target 1 IEA UniProt GO_REF:0000044 NCBI chr 3:37,815,259...37,839,266
Ensembl chr 3:37,815,370...37,844,608
JBrowse link
G CEP192 centrosomal protein 192 IEA UniProt GO_REF:0000044 NCBI chr 6:96,611,560...96,733,800
Ensembl chr 6:96,611,564...96,733,799
JBrowse link
G CLCN3 chloride voltage-gated channel 3 ISO (MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074) UniProt PMID:26342074, PMID:28972156 MGI:MGI:6414690, MGI:MGI:6414716 NCBI chr14:20,037,628...20,127,160
Ensembl chr14:20,026,929...20,127,155
JBrowse link
G CLCN4 chloride voltage-gated channel 4 IEA Ensembl GO_REF:0000107 NCBI chr  X:6,939,637...7,019,745
Ensembl chr  X:6,939,387...7,019,738
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin IEA UniProt GO_REF:0000044 NCBI chr 3:18,433,564...18,450,296 JBrowse link
G CLN5 CLN5 intracellular trafficking protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:49,105,822...49,128,425 JBrowse link
G COPS3 COP9 signalosome subunit 3 IEA Ensembl GO_REF:0000107 NCBI chr12:61,000,562...61,023,920
Ensembl chr12:60,994,310...61,045,396
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,208
JBrowse link
G CTSA cathepsin A ISO PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chr17:48,082,480...48,089,971
Ensembl chr17:48,082,458...48,089,971
JBrowse link
G CTSD cathepsin D IEA Ensembl GO_REF:0000107 NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,635
JBrowse link
G CUBN cubilin IEA UniProt GO_REF:0000044 NCBI chr10:43,102,931...43,414,692
Ensembl chr10:43,102,946...43,414,613
JBrowse link
G CYB561 cytochrome b561 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:15,435,973...15,447,104
Ensembl chr12:15,435,964...15,447,101
JBrowse link
G CYB561A3 cytochrome b561 family member A3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:10,142,102...10,159,160
Ensembl chr 2:10,142,170...10,161,891
JBrowse link
G CYBRD1 cytochrome b reductase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:77,649,124...77,695,141
Ensembl chr15:77,649,040...77,695,138
JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:48,421,788...48,523,530 JBrowse link
G FFAR4 free fatty acid receptor 4 ISO (PMID:22282525) UniProt PMID:22282525 Ensembl chr14:105,011,922...105,037,498 JBrowse link
G FLCN folliculin IEA UniProt GO_REF:0000044 NCBI chr12:61,029,186...61,045,400 JBrowse link
G FNIP1 folliculin interacting protein 1 IEA UniProt GO_REF:0000044 NCBI chr 2:133,958,112...134,093,408
Ensembl chr 2:133,958,114...134,093,413
JBrowse link
G FNIP2 folliculin interacting protein 2 IEA UniProt GO_REF:0000044 NCBI chr 8:47,702,877...47,838,541
Ensembl chr 8:47,702,578...47,838,521
JBrowse link
G GAA glucosidase alpha, acid IEA UniProt GO_REF:0000044 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
JBrowse link
G GBA glucosylceramidase beta ISS
IEA
UniProt GO_REF:0000024, GO_REF:0000044 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,196...94,609,745
JBrowse link
G GLMP glycosylated lysosomal membrane protein IEA UniProt GO_REF:0000044 NCBI chr 4:93,758,939...93,763,517
Ensembl chr 4:93,758,958...93,763,912
JBrowse link
G GPR137 G protein-coupled receptor 137 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 2:7,826,454...7,831,010
Ensembl chr 2:7,826,454...7,830,969
JBrowse link
G GPR137B G protein-coupled receptor 137B IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr14:55,125,405...55,181,688
Ensembl chr14:55,125,409...55,181,687
JBrowse link
G GPR137C G protein-coupled receptor 137C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:182,203,185...182,263,753
Ensembl chr 1:182,202,767...182,261,517
JBrowse link
G GPR143 G protein-coupled receptor 143 ISO (PMID:16621890) UniProtKB PMID:16621890 NCBI chr  X:6,242,296...6,276,654
NCBI chr  Y:4,669,764...4,704,304
JBrowse link
G GRN granulin precursor IEA Ensembl GO_REF:0000107 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446
JBrowse link
G HGSNAT heparan-alpha-glucosaminide N-acetyltransferase IEA InterPro GO_REF:0000002 NCBI chr17:11,989,871...12,035,819 JBrowse link
G HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:44,041,684...44,073,661
Ensembl chr14:44,049,707...44,073,622
JBrowse link
G HPS6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ISO (PMID:25189619) UniProtKB PMID:25189619 NCBI chr14:113,081,981...113,084,534
Ensembl chr14:113,081,981...113,084,534
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,254,002
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 RGD
ParkinsonsUK-UCL
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:67,292,901...67,306,208
Ensembl chr 5:67,291,771...67,305,758
JBrowse link
G ITM2C integral membrane protein 2C IEA UniProt GO_REF:0000044 NCBI chr15:131,614,887...131,627,428
Ensembl chr15:131,614,740...131,628,619
JBrowse link
G KXD1 KxDL motif containing 1 IEA UniProt GO_REF:0000044 NCBI chr 2:59,242,301...59,250,893 JBrowse link
G LAMP1 lysosomal associated membrane protein 1 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 IEA UniProt GO_REF:0000044 NCBI chr13:121,081,717...121,117,660 JBrowse link
G LAMP5 lysosomal associated membrane protein family member 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:18,434,106...18,452,689
Ensembl chr17:18,434,658...18,453,553
JBrowse link
G LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 IEA UniProt GO_REF:0000044 NCBI chr 9:6,674,045...6,680,067
Ensembl chr 9:6,672,475...6,680,053
JBrowse link
G LAMTOR2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 IEA UniProt GO_REF:0000044 NCBI chr 4:93,972,112...93,975,561
Ensembl chr 4:93,968,960...93,976,304
JBrowse link
G LAPTM4A lysosomal protein transmembrane 4 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:118,151,866...118,170,279
Ensembl chr 3:118,152,586...118,170,279
JBrowse link
G LAPTM4B lysosomal protein transmembrane 4 beta IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 4:38,932,735...39,015,219
Ensembl chr 4:38,932,736...39,023,925
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:87,363,911...87,390,371
Ensembl chr 6:87,363,911...87,390,288
JBrowse link
G LITAF lipopolysaccharide induced TNF factor IEA UniProt GO_REF:0000044 NCBI chr 3:31,482,605...31,576,211
Ensembl chr 3:31,482,353...31,579,082
JBrowse link
G LOC100154844 heparan-alpha-glucosaminide N-acetyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:8,644,388...8,665,004 JBrowse link
G LOC100520753 macrosialin IEA UniProt GO_REF:0000044 NCBI chr 8:28,306,225...28,310,187 JBrowse link
G MARCHF1 membrane associated ring-CH-type finger 1 ISO (MGI:MGI:4430128|PMID:19880452) UniProtKB PMID:19880452 MGI:MGI:4430128 NCBI chr 8:52,375,510...52,951,031 JBrowse link
G MCOLN1 mucolipin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:71,602,888...71,613,331
Ensembl chr 2:71,577,168...71,613,291
JBrowse link
G MCOLN2 mucolipin 2 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:128,772,904...128,836,958
Ensembl chr 6:128,776,430...128,836,951
JBrowse link
G MCOLN3 mucolipin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:130,835,295...130,866,525
Ensembl chr 4:130,835,410...130,864,903
JBrowse link
G MEAK7 MTOR associated protein, eak-7 homolog IEA Ensembl GO_REF:0000107 NCBI chr 6:4,169,840...4,226,798
Ensembl chr 6:4,204,078...4,228,590
JBrowse link
G MGAM2 maltase-glucoamylase 2 (putative) IEA UniProt GO_REF:0000044 NCBI chr18:7,767,831...7,863,717
Ensembl chr18:7,767,698...7,858,337
JBrowse link
G MIOS meiosis regulator for oocyte development IEA Ensembl GO_REF:0000107 NCBI chr 9:77,851,764...77,892,417
Ensembl chr 9:77,851,763...77,893,964
JBrowse link
G MTOR mechanistic target of rapamycin kinase IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G MYO7A myosin VIIA IEA Ensembl GO_REF:0000107 NCBI chr 9:11,251,187...11,337,618
Ensembl chr 9:11,249,075...11,666,296
JBrowse link
G NCSTN nicastrin ISO RGD PMID:12736250 RGD:724403 NCBI chr 4:90,121,209...90,142,934
Ensembl chr 4:90,118,998...90,142,890
JBrowse link
G NEU3 neuraminidase 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:9,315,263...9,333,878
Ensembl chr 9:9,315,301...9,334,918
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr13:32,830,895...32,834,205 JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit IEA Ensembl GO_REF:0000107 NCBI chr 3:41,478,465...41,540,719
Ensembl chr 3:41,479,193...41,545,023
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) UniProtKB PMID:19116314 NCBI chr15:56,657,648...56,869,920 JBrowse link
G OCLN occludin IEA Ensembl GO_REF:0000107 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,498...47,654,033
JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 IEA UniProt GO_REF:0000044 NCBI chr 7:78,447,323...78,451,761
Ensembl chr 7:78,447,369...78,451,846
JBrowse link
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 IEA UniProt GO_REF:0000044 NCBI chr 4:45,825,415...45,891,192
Ensembl chr 4:45,826,326...45,892,417
JBrowse link
G PLA2G4E phospholipase A2 group IVE IEA Ensembl GO_REF:0000107 NCBI chr 1:129,288,727...129,364,034
Ensembl chr 1:129,289,112...129,364,026
JBrowse link
G PLD3 phospholipase D family member 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:48,645,347...48,667,394
Ensembl chr 6:48,645,437...48,669,430
JBrowse link
G PSEN1 presenilin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,181...96,569,132
JBrowse link
G RNF13 ring finger protein 13 IEA Ensembl GO_REF:0000107 NCBI chr13:90,034,584...90,178,525
Ensembl chr13:90,034,344...90,178,129
JBrowse link
G RNF152 ring finger protein 152 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,529,879...159,606,031
Ensembl chr 1:159,530,623...159,601,981
JBrowse link
G RNF183 ring finger protein 183 IEA Ensembl GO_REF:0000107 NCBI chr 1:253,924,122...253,966,702
Ensembl chr 1:253,925,677...253,966,703
JBrowse link
G SCARB2 scavenger receptor class B member 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:71,838,395...71,910,461
Ensembl chr 8:71,838,788...71,940,607
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component IEA UniProt GO_REF:0000044 NCBI chr13:66,483,620...66,524,411
Ensembl chr13:66,480,151...66,524,344
JBrowse link
G SIDT2 SID1 transmembrane family member 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:44,543,648...44,559,717
Ensembl chr 9:44,543,701...44,559,716
JBrowse link
G SLA-8 MHC class I antigen 8 ISO (PMID:23851683) UniProt PMID:23851683 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G SLA-DMA SLA-DM alpha chain ISO (MGI:MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:MGI:3033762 NCBI chr 7:25,133,494...25,137,928
Ensembl chr 7:25,133,214...25,138,348
JBrowse link
G SLA-DMB MHC class II, DM beta ISO (MGI:MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:MGI:3033877 NCBI chr 7:25,119,278...25,125,089
Ensembl chr 7:25,117,685...25,125,847
JBrowse link
G SLA-DRA MHC class II DR-alpha IEA Ensembl GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,053...24,835,160
JBrowse link
G SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1 ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chr 7:24,901,386...24,914,016
Ensembl chr 7:24,881,775...24,914,053
JBrowse link
G SLC11A2 solute carrier family 11 member 2 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107
G SLC15A3 solute carrier family 15 member 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:10,799,927...10,814,363
Ensembl chr 2:10,800,547...10,816,519
JBrowse link
G SLC15A4 solute carrier family 15 member 4 ISO (MGI:MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:MGI:5571205 NCBI chr14:26,122,362...26,154,414
Ensembl chr14:26,122,363...26,154,786
JBrowse link
G SLC17A5 solute carrier family 17 member 5 IEA Ensembl GO_REF:0000107 NCBI chr 1:92,286,821...92,342,788
Ensembl chr 1:92,286,841...92,342,786
JBrowse link
G SLC26A11 solute carrier family 26 member 11 IEA Ensembl GO_REF:0000107 NCBI chr12:2,220,679...2,241,802
Ensembl chr12:2,220,683...2,242,290
JBrowse link
G SLC29A3 solute carrier family 29 member 3 IEA InterPro GO_REF:0000002 NCBI chr14:74,222,988...74,267,527
Ensembl chr14:74,222,658...74,274,660
JBrowse link
G SLC2A6 solute carrier family 2 member 6 IEA Ensembl GO_REF:0000107 NCBI chr 1:273,063,261...273,075,455
Ensembl chr 1:273,063,270...273,075,391
JBrowse link
G SLC35F6 solute carrier family 35 member F6 IEA Ensembl GO_REF:0000107 NCBI chr 3:112,280,654...112,296,874
Ensembl chr 3:112,280,658...112,296,866
JBrowse link
G SLC38A9 solute carrier family 38 member 9 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chr16:34,639,575...34,858,827
Ensembl chr16:34,738,194...34,858,735
JBrowse link
G SLC39A14 solute carrier family 39 member 14 IEA Ensembl GO_REF:0000107 NCBI chr14:6,639,485...6,687,929
Ensembl chr14:6,639,206...6,803,670
JBrowse link
G SLC39A8 solute carrier family 39 member 8 IEA Ensembl GO_REF:0000107 NCBI chr 8:118,604,852...118,678,115
Ensembl chr 8:118,605,293...118,684,039
JBrowse link
G SLC48A1 solute carrier family 48 member 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:78,141,220...78,150,584
Ensembl chr 5:78,141,255...78,150,584
JBrowse link
G SLC66A1 solute carrier family 66 member 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:77,761,861...77,778,570
Ensembl chr 6:77,761,892...77,782,641
JBrowse link
G SPAG9 sperm associated antigen 9 IEA Ensembl GO_REF:0000107 NCBI chr12:27,225,377...27,370,337
Ensembl chr12:27,198,946...27,425,463
JBrowse link
G SPPL2A signal peptide peptidase like 2A IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 1:121,067,638...121,134,896
Ensembl chr 1:121,066,674...121,134,891
JBrowse link
G SPPL2B signal peptide peptidase like 2B IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 2:76,230,060...76,247,067
Ensembl chr 2:76,230,060...76,247,052
JBrowse link
G SPPL2C signal peptide peptidase like 2C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:17,238,339...17,245,060
Ensembl chr12:17,240,736...17,242,823
JBrowse link
G STX17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chr 1:241,657,463...241,785,270
Ensembl chr 1:241,657,506...241,765,783
JBrowse link
G STX7 syntaxin 7 ISO RGD PMID:15133481 RGD:4892614 NCBI chr 1:31,184,905...31,237,052
Ensembl chr 1:31,184,947...31,243,071
JBrowse link
G STX8 syntaxin 8 ISO RGD PMID:15133481 RGD:4892614 NCBI chr12:54,296,988...54,544,668
Ensembl chr12:54,292,084...54,544,918
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex IEA Ensembl GO_REF:0000107 NCBI chr 6:167,811,589...167,861,321
Ensembl chr 6:167,811,594...167,861,307
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 IEA UniProt GO_REF:0000044 NCBI chr 3:5,414,071...5,442,953
Ensembl chr 3:5,414,073...5,442,943
JBrowse link
G TFEB transcription factor EB ISO (PMID:22343943), (PMID:22692423) UniProt PMID:22343943, PMID:22692423 NCBI chr 7:36,870,240...36,920,887
Ensembl chr 7:36,869,565...36,920,875
JBrowse link
G TM4SF5 transmembrane 4 L six family member 5 IEA Ensembl GO_REF:0000107 NCBI chr12:52,110,732...52,117,921
Ensembl chr12:52,110,718...52,117,783
JBrowse link
G TM6SF1 transmembrane 6 superfamily member 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:51,815,109...51,844,938
Ensembl chr 7:51,815,530...51,845,163
JBrowse link
G TMBIM1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) UniProtKB PMID:16607040 NCBI chr15:120,348,740...120,365,055
Ensembl chr15:120,348,735...120,365,007
JBrowse link
G TMEM106B transmembrane protein 106B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:81,837,654...81,864,215
Ensembl chr 9:81,837,688...81,864,193
JBrowse link
G TMEM165 transmembrane protein 165 IEA Ensembl GO_REF:0000107 NCBI chr 8:54,751,570...54,796,352
Ensembl chr 8:54,751,572...54,788,426
JBrowse link
G TMEM192 transmembrane protein 192 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 8:43,960,670...43,994,286
Ensembl chr 8:43,960,724...43,990,093
JBrowse link
G TMEM59 transmembrane protein 59 IEA UniProt GO_REF:0000044 NCBI chr 6:158,261,936...158,290,465
Ensembl chr 6:158,261,993...158,290,483
JBrowse link
G TMEM63A transmembrane protein 63A IEA Ensembl GO_REF:0000107 NCBI chr10:13,771,795...13,814,442
Ensembl chr10:13,769,603...13,814,020
JBrowse link
G TMEM79 transmembrane protein 79 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:93,762,176...93,768,840
Ensembl chr 4:93,762,177...93,768,633
JBrowse link
G TMEM9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chr10:23,586,487...23,600,042
Ensembl chr10:23,586,488...23,610,716
JBrowse link
G TPCN1 two pore segment channel 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,698,680...38,773,189
Ensembl chr14:38,668,138...38,773,186
JBrowse link
G TPCN2 two pore segment channel 2 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr 2:4,069,267...4,105,065 JBrowse link
G TRIM23 tripartite motif containing 23 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:44,103,339...44,146,291
Ensembl chr16:44,103,787...44,146,281
JBrowse link
G TRPM2 transient receptor potential cation channel subfamily M member 2 IEA Ensembl GO_REF:0000107 NCBI chr13:207,212,339...207,263,313
Ensembl chr13:207,211,952...207,264,982
JBrowse link
G UBA1 ubiquitin like modifier activating enzyme 1 colocalizes_with ISO
IEA
(PMID:1376922) UniProtKB
Ensembl
PMID:1376922 GO_REF:0000107 NCBI chr  X:41,810,726...41,832,818
Ensembl chr  X:41,814,101...41,832,812
JBrowse link
G UBXN6 UBX domain protein 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:74,357,522...74,378,600
Ensembl chr 2:74,340,838...74,378,595
JBrowse link
G VAMP7 vesicle associated membrane protein 7 ISO PMID:10459012 UniProt
RGD
PMID:10459012, PMID:15133481 RGD:4892614, RGD:8554473 NCBI chr  X:125,863,266...125,917,232
Ensembl chr  X:125,863,291...125,917,227
JBrowse link
G VAMP8 vesicle associated membrane protein 8 ISO (PMID:23217709) UniProtKB
RGD
PMID:15133481, PMID:23217709 RGD:4892614 NCBI chr 3:59,187,900...59,193,165 JBrowse link
G VPS11 VPS11 core subunit of CORVET and HOPS complexes IEA UniProt GO_REF:0000044 NCBI chr 9:46,285,718...46,297,465
Ensembl chr 9:46,285,729...46,297,465
JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A IEA Ensembl GO_REF:0000107 NCBI chr 1:230,069,339...230,331,343
Ensembl chr 1:230,069,337...230,331,200
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes IEA UniProt GO_REF:0000044 NCBI chr17:32,803,596...32,825,974
Ensembl chr17:32,803,412...32,825,950
JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes IEA UniProt GO_REF:0000044 NCBI chr14:30,469,003...30,496,626 JBrowse link
G VPS33B VPS33B late endosome and lysosome associated IEA UniProt GO_REF:0000044 NCBI chr 7:55,840,612...55,865,045 JBrowse link
G VPS39 VPS39 subunit of HOPS complex IEA Ensembl GO_REF:0000107 NCBI chr 1:129,144,338...129,198,760
Ensembl chr 1:129,144,344...129,198,764
JBrowse link
G VPS41 VPS41 subunit of HOPS complex IEA Ensembl GO_REF:0000107 NCBI chr18:55,293,655...55,466,628
Ensembl chr18:55,301,619...55,466,628
JBrowse link
G VTI1B vesicle transport through interaction with t-SNAREs 1B IEA Ensembl GO_REF:0000107 NCBI chr 7:91,386,020...91,413,480
Ensembl chr 7:91,374,625...91,413,607
JBrowse link
G WDR24 WD repeat domain 24 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,085,415...41,090,628
Ensembl chr 3:41,085,442...41,090,631
JBrowse link
G WDR59 WD repeat domain 59 IEA Ensembl GO_REF:0000107 NCBI chr 6:12,682,166...12,769,339
Ensembl chr 6:12,681,898...12,771,481
JBrowse link
G WDR81 WD repeat domain 81 IEA Ensembl GO_REF:0000107 NCBI chr12:47,921,818...47,933,782
Ensembl chr12:47,922,002...47,933,780
JBrowse link
PAS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAC14 VAC14 component of PIKFYVE complex IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,683,800...13,791,246
Ensembl chr 6:13,683,799...13,791,241
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HRG histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chr13:124,505,305...124,516,387
Ensembl chr13:124,505,303...124,516,384
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 IEA Ensembl GO_REF:0000107 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615
JBrowse link
vacuolar proton-transporting V-type ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:36,271,154...36,300,240
Ensembl chr  X:36,271,223...36,304,183
JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:20,288,409...20,344,142
Ensembl chr12:20,288,409...20,344,128
JBrowse link
G ATP6V0A2 ATPase H+ transporting V0 subunit a2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:29,250,400...29,297,697
Ensembl chr14:29,250,404...29,297,663
JBrowse link
G ATP6V0A4 ATPase H+ transporting V0 subunit a4 colocalizes_with IBA
ISO
(PMID:21873635)
(PMID:10973252)
GO_Central
HGNC
PMID:10973252, PMID:21873635 NCBI chr18:10,868,208...10,966,801
Ensembl chr18:10,901,568...10,966,410
JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:28,090,180...28,132,080
Ensembl chr 6:28,090,181...28,131,985
JBrowse link
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:50,694,188...50,749,373
Ensembl chr 4:50,694,189...50,749,378
JBrowse link
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 IEA Ensembl GO_REF:0000107 NCBI chr 3:71,560,102...71,591,885
Ensembl chr 3:71,560,738...71,591,856
JBrowse link
G ATP6V1F ATPase H+ transporting V1 subunit F IEA Ensembl GO_REF:0000107 NCBI chr18:19,753,761...19,756,706
Ensembl chr18:19,753,763...19,756,648
JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 1:255,151,909...255,159,299
Ensembl chr 1:255,151,913...255,195,278
JBrowse link
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:23,670,970...23,673,860
Ensembl chr 7:23,670,965...23,673,260
JBrowse link
G ATP6V1G3 ATPase H+ transporting V1 subunit G3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:21,371,302...21,394,817
Ensembl chr10:21,371,303...21,394,453
JBrowse link
G CCDC115 coiled-coil domain containing 115 IEA Ensembl GO_REF:0000107 NCBI chr15:31,974,715...31,979,062
Ensembl chr15:31,974,724...31,979,059
JBrowse link
G LOC102165256 V-type proton ATPase subunit G 1 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:19,272,032...19,272,926 JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,630...4,867,215
JBrowse link
G TMEM199 transmembrane protein 199 IEA Ensembl GO_REF:0000107 NCBI chr12:44,636,379...44,641,536
Ensembl chr12:44,636,378...44,641,530
JBrowse link
G TMEM268 transmembrane protein 268 IEA InterPro GO_REF:0000002 NCBI chr 1:255,168,666...255,195,980
Ensembl chr 1:255,151,913...255,195,278
JBrowse link
vacuolar proton-transporting V-type ATPase, V1 domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6V1C1 ATPase H+ transporting V1 subunit C1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:34,033,943...34,084,990
Ensembl chr 4:34,026,192...34,222,405
JBrowse link
G ATP6V1C2 ATPase H+ transporting V1 subunit C2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:125,774,259...125,825,752
Ensembl chr 3:125,775,100...125,825,244
JBrowse link
G ATP6V1H ATPase H+ transporting V1 subunit H IEA UniProt
InterPro
GO_REF:0000002, GO_REF:0000104 NCBI chr 4:77,211,493...77,269,757
Ensembl chr 4:77,211,526...77,302,162
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16933
    cellular anatomical entity 16845
      cytoplasm 9718
        vacuole 506
          vacuolar membrane 218
            EGO complex 5
            PAS complex 1
            autophagosome membrane + 29
            contractile vacuolar membrane + 0
            extrinsic component of vacuolar membrane + 4
            high-affinity iron exporter complex 0
            intrinsic component of vacuolar membrane + 6
            lytic vacuole membrane + 159
            plant-type vacuole membrane + 0
            vacuolar HOPS complex + 0
            vacuolar proton-transporting V-type ATPase complex + 19
Path 2
Term Annotations click to browse term
  cellular_component 16933
    cellular anatomical entity 16845
      intracellular anatomical structure 12642
        intracellular organelle 11093
          intracellular membrane-bounded organelle 9518
            vacuole 506
              vacuolar membrane 218
                EGO complex 5
                PAS complex 1
                autophagosome membrane + 29
                contractile vacuolar membrane + 0
                extrinsic component of vacuolar membrane + 4
                high-affinity iron exporter complex 0
                intrinsic component of vacuolar membrane + 6
                lytic vacuole membrane + 159
                plant-type vacuole membrane + 0
                vacuolar HOPS complex + 0
                vacuolar proton-transporting V-type ATPase complex + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.