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ONTOLOGY REPORT - ANNOTATIONS


Term:autophagosome
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Accession:GO:0005776 term browser browse the term
Definition:A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy.
Synonyms:exact_synonym: autophagic vacuole
 related_synonym: initial autophagic vacuole
 xref: NIF_Subcellular:sao8663416959


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autophagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADPRHL1 ADP-ribosylhydrolase like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:78,662,293...78,677,945 JBrowse link
G ATG12 autophagy related 12 IEA Ensembl GO_REF:0000107 NCBI chr 2:119,948,443...119,965,702
Ensembl chr 2:119,941,997...119,965,510
JBrowse link
G ATG14 autophagy related 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:184,701,020...184,743,752
Ensembl chr 1:184,686,142...184,743,753
JBrowse link
G ATG16L1 autophagy related 16 like 1 ISO (MGI:2661260|PMID:12665549) MGI PMID:12665549 MGI:2661260 NCBI chr15:133,651,294...133,693,472
Ensembl chr15:133,651,286...133,706,038
JBrowse link
G ATG16L2 autophagy related 16 like 2 NOT ISO (MGI:6436405|PMID:22082872) UniProt PMID:22082872 MGI:6436405 NCBI chr 9:7,346,973...7,360,189
Ensembl chr 9:7,347,001...7,365,627
JBrowse link
G ATG5 autophagy related 5 IEA Ensembl GO_REF:0000107 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,453
JBrowse link
G ATG9A autophagy related 9A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:121,254,355...121,265,564
Ensembl chr15:121,254,355...121,282,516
JBrowse link
G ATG9B autophagy related 9B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:6,200,246...6,208,988
Ensembl chr18:6,200,639...6,208,286
JBrowse link
G ATP13A2 ATPase cation transporting 13A2 IEA Ensembl GO_REF:0000107 NCBI chr 6:75,618,317...75,638,591
Ensembl chr 6:75,618,416...75,638,591
JBrowse link
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor IEA Ensembl GO_REF:0000107 NCBI chr 3:68,520,048...68,523,076
Ensembl chr 3:68,519,969...68,523,076
JBrowse link
G BECN1 beclin 1 IEA UniProt GO_REF:0000044 NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373
JBrowse link
G C10H9orf72 chromosome 10 C9orf72 homolog IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr10:38,389,366...38,415,903
Ensembl chr10:38,389,331...38,415,903
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:25,050,008...25,080,230
Ensembl chr12:24,867,138...25,088,925
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:3690270|PMID:16714284) MGI PMID:16714284 MGI:3690270 NCBI chr 3:18,433,564...18,450,296 JBrowse link
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:29,068,107...29,146,792
Ensembl chr13:29,066,986...29,146,755
JBrowse link
G GABARAP GABA type A receptor-associated protein ISO (PMID:19056683) UniProtKB PMID:19056683 NCBI chr12:52,596,130...52,598,166
Ensembl chr12:52,597,083...52,598,194
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,757,488...61,767,593
JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:12,122,219...12,132,986
Ensembl chr 6:12,105,658...12,132,990
JBrowse link
G HAP1 huntingtin associated protein 1 IEA Ensembl GO_REF:0000107 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G HTT huntingtin IEA Ensembl GO_REF:0000107 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G IL1B interleukin 1 beta IEA UniProt GO_REF:0000044 NCBI chr 3:43,670,126...43,677,125 JBrowse link
G IL1B2 interleukin 1, beta 2 IEA UniProt GO_REF:0000044
G LOC102158581 gamma-aminobutyric acid receptor-associated protein pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,675,741...76,676,338 JBrowse link
G LOC110255300 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G LOC110258125 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G LOC110258578 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G LOC110258579 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G LOC110258582 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G LOC110259156 interleukin-1 beta-like IEA UniProt GO_REF:0000044
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,957,830...37,959,505
Ensembl chr17:37,957,507...37,959,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:1,919,879...1,941,069
Ensembl chr 6:1,915,387...1,941,077
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:15,371,182...15,379,067
Ensembl chr10:15,372,879...15,382,939
JBrowse link
G MAPK15 mitogen-activated protein kinase 15 IEA Ensembl GO_REF:0000107 NCBI chr 4:909,266...915,537
Ensembl chr 4:902,439...915,475
JBrowse link
G NBR1 NBR1 autophagy cargo receptor colocalizes_with IEA
ISO
(MGI:4818844|PMID:20616007) UniProt
BHF-UCL
PMID:20616007 GO_REF:0000044, MGI:4818844 NCBI chr12:19,755,733...19,789,014
Ensembl chr12:19,755,737...19,788,952
JBrowse link
G OPTN optineurin IEA UniProt GO_REF:0000044 NCBI chr10:48,532,029...48,582,952
Ensembl chr10:48,530,844...48,582,910
JBrowse link
G OSBPL7 oxysterol binding protein like 7 IEA Ensembl GO_REF:0000107 NCBI chr12:24,059,128...24,075,102
Ensembl chr12:24,059,932...24,083,036
JBrowse link
G PEG3 paternally expressed 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:61,281,931...61,307,788
Ensembl chr 6:61,285,456...61,292,885
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 IEA UniProt GO_REF:0000044 NCBI chr 6:125,890,598...126,038,753
Ensembl chr 6:125,890,708...126,043,161
JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha IEA Ensembl GO_REF:0000107 NCBI chr10:52,224,367...52,408,928
Ensembl chr10:52,223,425...52,408,922
JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta IEA Ensembl GO_REF:0000107 NCBI chr12:23,317,113...23,345,661
Ensembl chr12:23,317,185...23,346,424
JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma IEA Ensembl GO_REF:0000107 NCBI chr 5:22,854,142...22,867,032
Ensembl chr 5:22,854,137...22,867,037
JBrowse link
G RAB12 RAB12, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 6:99,216,225...99,244,627
Ensembl chr 6:99,216,228...99,244,868
JBrowse link
G RAB23 RAB23, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 7:28,632,065...28,658,958
Ensembl chr 7:28,632,082...28,658,953
JBrowse link
G RAB24 RAB24, member RAS oncogene family IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:80,646,426...80,651,498 JBrowse link
G RUFY4 RUN and FYVE domain containing 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:120,193,657...120,213,625
Ensembl chr15:120,192,235...120,213,462
JBrowse link
G SNAP29 synaptosome associated protein 29 IEA Ensembl GO_REF:0000107 NCBI chr14:50,492,187...50,511,475
Ensembl chr14:50,492,154...50,511,456
JBrowse link
G SQSTM1 sequestosome 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:78,752,768...78,763,998
Ensembl chr 2:78,752,768...78,784,256
JBrowse link
G SRPX sushi repeat containing protein X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:34,075,577...34,198,462
Ensembl chr  X:34,075,577...34,198,467
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:141,359,402...141,367,222
Ensembl chr 2:141,358,993...141,367,198
JBrowse link
G STX17 syntaxin 17 ISO (PMID:25686604)
(MGI:5805578|PMID:27628032)
GO_Central
UniProt
PMID:25686604, PMID:27628032 MGI:5805578 NCBI chr 1:241,657,463...241,785,270
Ensembl chr 1:241,657,506...241,765,783
JBrowse link
G TBC1D12 TBC1 domain family member 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:105,806,384...105,919,986
Ensembl chr14:105,829,857...105,920,924
JBrowse link
G TBC1D14 TBC1 domain family member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:3,833,314...3,918,783 JBrowse link
G TBC1D25 TBC1 domain family member 25 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:42,682,267...42,696,579
Ensembl chr  X:42,682,268...42,696,579
JBrowse link
G TBC1D5 TBC1 domain family member 5 IEA Ensembl GO_REF:0000107 NCBI chr13:4,191,544...4,738,448
Ensembl chr13:4,035,026...4,738,397
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 IEA UniProt GO_REF:0000044 NCBI chr 2:74,004,566...74,021,100
Ensembl chr 2:74,004,550...74,021,094
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr 4:41,747,654...41,766,688
Ensembl chr 4:41,747,726...41,766,684
JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:38,104,189...38,113,167
Ensembl chr17:38,104,200...38,113,165
JBrowse link
G UBQLN1 ubiquilin 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr10:31,275,916...31,317,521
Ensembl chr10:31,275,868...31,412,935
JBrowse link
G UBQLN4 ubiquilin 4 IEA Ensembl GO_REF:0000107 NCBI chr 4:93,976,386...93,994,830
Ensembl chr 4:93,976,431...93,994,830
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO (PMID:17595159), (PMID:22456507) UniProtKB PMID:17595159, PMID:22456507 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,696...23,448,138
JBrowse link
G VPS11 VPS11 core subunit of CORVET and HOPS complexes IEA UniProt GO_REF:0000044 NCBI chr 9:46,285,718...46,297,465
Ensembl chr 9:46,285,729...46,297,465
JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes IEA Ensembl GO_REF:0000107 NCBI chr14:30,469,003...30,496,626 JBrowse link
G VTI1A vesicle transport through interaction with t-SNAREs 1A IEA Ensembl GO_REF:0000107 NCBI chr14:122,848,727...123,217,568
Ensembl chr14:122,849,004...123,215,942
JBrowse link
G WASHC1 WASH complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:67,395,737...67,412,408
Ensembl chr 5:67,391,277...67,412,434
JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 colocalizes_with ISO (PMID:20168092)
(PMID:15292400)
UniProtKB
MGI
PMID:15292400, PMID:20168092 NCBI chr 8:133,665,585...133,939,860
Ensembl chr 8:133,665,520...133,937,221
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 NOT|colocalizes_with IEA
ISO
(PMID:20505359) Ensembl
UniProtKB
PMID:20505359 GO_REF:0000107 NCBI chr 3:3,800,170...3,830,973
Ensembl chr 3:3,800,180...3,834,413
JBrowse link
G ZFYVE1 zinc finger FYVE-type containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:96,323,256...96,380,286
Ensembl chr 7:96,323,262...96,380,271
JBrowse link
amphisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G SQSTM1 sequestosome 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 2:78,752,768...78,763,998
Ensembl chr 2:78,752,768...78,784,256
JBrowse link
autolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin IEA Ensembl GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296 JBrowse link
G FTH1 ferritin heavy chain 1 ISO (PMID:25327288) MGI PMID:25327288 NCBI chr 2:9,535,051...9,537,979 JBrowse link
G FTL ferritin light chain ISO (PMID:25327288) MGI PMID:25327288 NCBI chr 6:54,231,121...54,232,756
Ensembl chr 6:54,227,164...54,232,752
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 IEA Ensembl GO_REF:0000107 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
JBrowse link
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha IEA Ensembl GO_REF:0000107 NCBI chr17:37,957,830...37,959,505
Ensembl chr17:37,957,507...37,959,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta IEA Ensembl GO_REF:0000107 NCBI chr 6:1,919,879...1,941,069
Ensembl chr 6:1,915,387...1,941,077
JBrowse link
G NCOA4 nuclear receptor coactivator 4 IEA Ensembl GO_REF:0000107 NCBI chr14:90,505,614...90,531,302
Ensembl chr14:90,503,746...90,536,009
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:125,890,598...126,038,753
Ensembl chr 6:125,890,708...126,043,161
JBrowse link
G SQSTM1 sequestosome 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:78,752,768...78,763,998
Ensembl chr 2:78,752,768...78,784,256
JBrowse link
autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:133,651,294...133,693,472
Ensembl chr15:133,651,286...133,706,038
JBrowse link
G ATG16L2 autophagy related 16 like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:7,346,973...7,360,189
Ensembl chr 9:7,347,001...7,365,627
JBrowse link
G ATG9A autophagy related 9A NOT ISO
IEA
(PMID:22456507) MGI
UniProt
PMID:22456507 GO_REF:0000044 NCBI chr15:121,254,355...121,265,564
Ensembl chr15:121,254,355...121,282,516
JBrowse link
G ATG9B autophagy related 9B IEA UniProt GO_REF:0000044 NCBI chr18:6,200,246...6,208,988
Ensembl chr18:6,200,639...6,208,286
JBrowse link
G ATP6AP2 ATPase H+ transporting accessory protein 2 IEA UniProt GO_REF:0000044 NCBI chr  X:36,271,154...36,300,240
Ensembl chr  X:36,271,223...36,304,183
JBrowse link
G GABARAP GABA type A receptor-associated protein ISO (PMID:15169837) UniProtKB PMID:15169837 NCBI chr12:52,596,130...52,598,166
Ensembl chr12:52,597,083...52,598,194
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,757,488...61,767,593
JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:12,122,219...12,132,986
Ensembl chr 6:12,105,658...12,132,990
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 ISO (MGI:6323456|PMID:31006538) MGI PMID:31006538 MGI:6323456 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615
JBrowse link
G LOC102158581 gamma-aminobutyric acid receptor-associated protein pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,675,741...76,676,338 JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,957,830...37,959,505
Ensembl chr17:37,957,507...37,959,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:1,919,879...1,941,069
Ensembl chr 6:1,915,387...1,941,077
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:15,371,182...15,379,067
Ensembl chr10:15,372,879...15,382,939
JBrowse link
G PRKD1 protein kinase D1 ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chr 7:69,527,743...69,872,374
Ensembl chr 7:69,527,910...69,872,865
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 ISO (MGI:6323456|PMID:31006538) MGI PMID:31006538 MGI:6323456 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,338...77,649,550
JBrowse link
G RPN2 ribophorin II ISO RGD PMID:2351689 RGD:2325969 NCBI chr17:40,322,364...40,378,866
Ensembl chr17:40,322,394...40,378,857
JBrowse link
G RUBCNL rubicon like autophagy enhancer IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:20,995,439...21,036,429
Ensembl chr11:20,995,898...21,036,417
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 IEA UniProt GO_REF:0000044 NCBI chr 4:129,361,596...129,395,790
Ensembl chr 4:129,357,548...129,395,583
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 IEA UniProt GO_REF:0000044 NCBI chr 2:141,359,402...141,367,222
Ensembl chr 2:141,358,993...141,367,198
JBrowse link
G STX17 syntaxin 17 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:241,657,463...241,785,270
Ensembl chr 1:241,657,506...241,765,783
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 IEA UniProt GO_REF:0000044 NCBI chr 3:5,414,071...5,442,953
Ensembl chr 3:5,414,073...5,442,943
JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor IEA Ensembl GO_REF:0000107 NCBI chr13:33,892,557...33,924,175
Ensembl chr13:33,771,816...33,926,156
JBrowse link
G UVRAG UV radiation resistance associated IEA Ensembl GO_REF:0000107 NCBI chr 9:10,088,779...10,370,857
Ensembl chr 9:10,088,798...10,369,037
JBrowse link
G WDR81 WD repeat domain 81 IEA Ensembl GO_REF:0000107 NCBI chr12:47,921,818...47,933,782
Ensembl chr12:47,922,002...47,933,780
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 IEA Ensembl GO_REF:0000107 NCBI chr12:11,715,332...11,752,009
Ensembl chr12:11,715,318...11,752,021
JBrowse link
extrinsic component of autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ULK1 unc-51 like autophagy activating kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,696...23,448,138
JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 8:133,665,585...133,939,860
Ensembl chr 8:133,665,520...133,937,221
JBrowse link
integral component of autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IEA Ensembl GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
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Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16944
    cellular anatomical entity 16805
      cytoplasm 9729
        vacuole 506
          autophagosome 86
            amphisome + 2
            autolysosome + 11
            autophagosome lumen 0
            autophagosome membrane + 29
Path 2
Term Annotations click to browse term
  cellular_component 16944
    cellular anatomical entity 16805
      intracellular anatomical structure 12592
        intracellular organelle 10646
          intracellular membrane-bounded organelle 9418
            vacuole 506
              autophagosome 86
                amphisome + 2
                autolysosome + 11
                autophagosome lumen 0
                autophagosome membrane + 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.