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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum lumen
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Accession:GO:0005788 term browser browse the term
Definition:The volume enclosed by the membranes of the endoplasmic reticulum.
Synonyms:exact_synonym: ER cisterna;   ER lumen;   cisternal lumen;   endoplasmic reticulum cisterna
 alt_id: GO:0016022


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endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam10 ADAM metallopeptidase domain 10 JBrowse link NW_004955450 15,853,372 15,927,966 RGD:9068941
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 JBrowse link NW_004955513 2,761,386 2,786,447 RGD:9068941
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 JBrowse link NW_004955407 26,597,165 26,643,972 RGD:9068941
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 JBrowse link NW_004955450 525,313 581,006 RGD:9068941
G Adamtsl1 ADAMTS like 1 JBrowse link NW_004955434 20,929,569 21,392,319 RGD:9068941
G Adamtsl4 ADAMTS like 4 JBrowse link NW_004955413 258,078 269,324 RGD:9068941
G Ahsg alpha 2-HS glycoprotein JBrowse link NW_004955420 21,071,111 21,078,397 RGD:9068941
G Alb albumin JBrowse link NW_004955447 9,327 21,212 RGD:9068941
G Alg12 ALG12 alpha-1,6-mannosyltransferase JBrowse link NW_004955413 33,030,994 33,039,622 RGD:9068941
G Ambn ameloblastin JBrowse link NW_004955447 2,363,240 2,374,827 RGD:9068941
G Amelx amelogenin X-linked JBrowse link NW_004955544 1,974,889 1,979,063 RGD:9068941
G Amtn amelotin JBrowse link NW_004955447 2,422,189 2,433,633 RGD:9068941
G Ano8 anoctamin 8 JBrowse link NW_004955524 903,750 912,827 RGD:9068941
G Aplp2 amyloid beta precursor like protein 2 JBrowse link NW_004955412 31,043,320 31,075,617 RGD:9068941
G Apoa1 apolipoprotein A1 JBrowse link NW_004955412 18,170,331 18,172,298 RGD:9068941
G Apoa2 apolipoprotein A2 JBrowse link NW_004955468 12,977,956 12,979,282 RGD:9068941
G Apoa4 apolipoprotein A4 JBrowse link NW_004955412 18,158,095 18,160,636 RGD:9068941
G Apoa5 apolipoprotein A5 JBrowse link NW_004955412 18,128,861 18,131,752 RGD:9068941
G Apob apolipoprotein B JBrowse link NW_004955469 3,437,422 3,478,408 RGD:9068941
G Apoe apolipoprotein E JBrowse link NW_004955555 1,998,170 2,002,003 RGD:9068941
G App amyloid beta precursor protein JBrowse link NW_004955407 25,725,259 25,973,582 RGD:9068941
G Arsa arylsulfatase A JBrowse link NW_004955413 33,624,460 33,629,491 RGD:9068941
G Arsb arylsulfatase B JBrowse link NW_004955425 22,120,507 22,281,221 RGD:9068941
G Arsg arylsulfatase G JBrowse link NW_004955478 4,326,669 4,475,559 RGD:9068941
G Arsh arylsulfatase family member H JBrowse link NW_004955499 1,787,356 1,818,206 RGD:9068941
G Arsi arylsulfatase family member I JBrowse link NW_004955415 4,234,491 4,240,970 RGD:9068941
G Arsj arylsulfatase family member J JBrowse link NW_004955428 25,373,664 25,436,251 RGD:9068941
G Arsk arylsulfatase family member K JBrowse link NW_004955418 16,959,736 16,989,293 RGD:9068941
G Arsl arylsulfatase L JBrowse link NW_004955499 1,751,663 1,773,112 RGD:9068941
G B2m beta-2-microglobulin JBrowse link NW_004955416 11,205,503 11,211,325 RGD:9068941
G Bace1 beta-secretase 1 JBrowse link NW_004955412 18,596,643 18,620,089 RGD:9068941
G Bche butyrylcholinesterase JBrowse link NW_004955448 15,327,374 15,396,827 RGD:9068941
G Bglap bone gamma-carboxyglutamate protein JBrowse link NW_004955545 2,381,091 2,382,114 RGD:9068941
G Bmp15 bone morphogenetic protein 15 JBrowse link NW_004955543 2,304,112 2,345,376 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Bpifb2 BPI fold containing family B member 2 JBrowse link NW_004955422 28,233,236 28,251,627 RGD:9068941
G C3 complement C3 JBrowse link NW_004955495 2,796,601 2,824,233 RGD:9068941
G Calr calreticulin JBrowse link NW_004955415 31,985,147 31,989,372 RGD:9068941
G Calr3 calreticulin 3 JBrowse link NW_004955524 1,245,607 1,256,528 RGD:9068941
G Calu calumenin JBrowse link NW_004955479 9,541,574 9,572,189 RGD:9068941
G Canx calnexin JBrowse link NW_004955408 850,773 894,362 RGD:9068941
G Ccn1 cellular communication network factor 1 JBrowse link NW_004955423 8,416,498 8,419,029 RGD:9068941
G Cd4 CD4 molecule JBrowse link NW_004955413 4,400,326 4,422,110 RGD:9068941
G Cdh2 cadherin 2 JBrowse link NW_004955402 15,829,895 16,049,874 RGD:9068941
G Cercam cerebral endothelial cell adhesion molecule JBrowse link NW_004955570 898,157 925,581 RGD:9068941
G Ces3 carboxylesterase 3 JBrowse link NW_004955484 9,602,861 9,620,025 RGD:9068941
G Cfp complement factor properdin JBrowse link NW_004955516 449,993 455,897 RGD:9068941
G Chgb chromogranin B JBrowse link NW_004955415 16,311,769 16,324,962 RGD:9068941
G Chrdl1 chordin like 1 JBrowse link NW_004955490 5,108,308 5,218,679 RGD:9068941
G Ckap4 cytoskeleton associated protein 4 JBrowse link NW_004955405 40,277,082 40,279,486 RGD:9068941
G Cln6 CLN6 transmembrane ER protein JBrowse link NW_004955450 7,876,572 7,885,305 RGD:9068941
G Cnpy3 canopy FGF signaling regulator 3 JBrowse link NW_004955437 8,930,883 8,939,869 RGD:9068941
G Col10a1 collagen type X alpha 1 chain JBrowse link NW_004955526 641,577 679,295 RGD:9068941
G Col11a1 collagen type XI alpha 1 chain JBrowse link NW_004955435 7,352,617 7,545,235 RGD:9068941
G Col11a2 collagen type XI alpha 2 chain JBrowse link NW_004955437 1,739,426 1,767,087 RGD:9068941
G Col12a1 collagen type XII alpha 1 chain JBrowse link NW_004955488 8,128,816 8,240,714 RGD:9068941
G Col13a1 collagen type XIII alpha 1 chain JBrowse link NW_004955437 21,256,410 21,393,385 RGD:9068941
G Col14a1 collagen type XIV alpha 1 chain JBrowse link NW_004955417 25,579,547 25,774,067 RGD:9068941
G Col15a1 collagen type XV alpha 1 chain JBrowse link NW_004955419 26,577,172 26,687,750 RGD:9068941
G Col16a1 collagen type XVI alpha 1 chain JBrowse link NW_004955452 10,062,409 10,111,778 RGD:9068941
G Col17a1 collagen type XVII alpha 1 chain JBrowse link NW_004955485 6,568,178 6,616,972 RGD:9068941
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link NW_004955407 42,091,211 42,131,343 RGD:9068941
G Col19a1 collagen type XIX alpha 1 chain JBrowse link NW_004955488 4,984,140 5,288,530 RGD:9068941
G Col1a1 collagen type I alpha 1 chain JBrowse link NW_004955451 11,468,156 11,484,410 RGD:9068941
G Col1a2 collagen type I alpha 2 chain JBrowse link NW_004955432 11,127,961 11,164,145 RGD:9068941
G Col20a1 collagen type XX alpha 1 chain JBrowse link NW_004955528 847,416 878,741 RGD:9068941
G Col21a1 collagen type XXI alpha 1 chain JBrowse link NW_004955411 68,176 260,521 RGD:9068941
G Col22a1 collagen type XXII alpha 1 chain JBrowse link NW_004955461 12,596,449 12,870,853 RGD:9068941
G Col23a1 collagen type XXIII alpha 1 chain JBrowse link NW_004955408 1,771,547 2,034,458 RGD:9068941
G Col24a1 collagen type XXIV alpha 1 chain JBrowse link NW_004955423 7,990,869 8,292,704 RGD:9068941
G Col25a1 collagen type XXV alpha 1 chain JBrowse link NW_004955496 839,474 1,255,107 RGD:9068941
G Col26a1 collagen type XXVI alpha 1 chain JBrowse link NW_004955456 15,803,342 15,951,349 RGD:9068941
G Col27a1 collagen type XXVII alpha 1 chain JBrowse link NW_004955419 13,289,006 13,411,118 RGD:9068941
G Col28a1 collagen type XXVIII alpha 1 chain JBrowse link NW_004955432 14,462,226 14,634,396 RGD:9068941
G Col2a1 collagen type II alpha 1 chain JBrowse link NW_004955500 6,860,771 6,885,466 RGD:9068941
G Col3a1 collagen type III alpha 1 chain JBrowse link NW_004955403 9,720,831 9,758,019 RGD:9068941
G Col4a1 collagen type IV alpha 1 chain JBrowse link NW_004955404 2,196,193 2,327,324 RGD:9068941
G Col4a2 collagen type IV alpha 2 chain JBrowse link NW_004955404 2,092,184 2,178,079 RGD:9068941
G Col4a3 collagen type IV alpha 3 chain JBrowse link NW_004955453 7,261,278 7,351,414 RGD:9068941
G Col4a4 collagen type IV alpha 4 chain JBrowse link NW_004955453 7,405,167 7,524,038 RGD:9068941
G Col4a5 collagen type IV alpha 5 chain JBrowse link NW_004955490 7,168,725 7,409,655 RGD:9068941
G Col4a6 collagen type IV alpha 6 chain JBrowse link NW_004955490 7,409,687 7,764,300 RGD:9068941
G Col5a1 collagen type V alpha 1 chain JBrowse link NW_004955513 3,533,612 3,660,605 RGD:9068941
G Col5a2 collagen type V alpha 2 chain JBrowse link NW_004955403 9,562,401 9,703,828 RGD:9068941
G Col5a3 collagen type V alpha 3 chain JBrowse link NW_004955495 1,347,171 1,386,683 RGD:9068941
G Col6a1 collagen type VI alpha 1 chain JBrowse link NW_004955407 42,461,837 42,479,048 RGD:9068941
G Col6a2 collagen type VI alpha 2 chain JBrowse link NW_004955407 42,575,677 42,600,967 RGD:9068941
G Col6a3 collagen type VI alpha 3 chain JBrowse link NW_004955542 2,869,183 2,950,569 RGD:9068941
G Col7a1 collagen type VII alpha 1 chain JBrowse link NW_004955532 650,913 681,186 RGD:9068941
G Col8a1 collagen type VIII alpha 1 chain JBrowse link NW_004955427 1,187,550 1,335,794 RGD:9068941
G Col8a2 collagen type VIII alpha 2 chain JBrowse link NW_004955452 14,127,654 14,149,582 RGD:9068941
G Col9a1 collagen type IX alpha 1 chain JBrowse link NW_004955488 5,296,895 5,384,940 RGD:9068941
G Col9a2 collagen type IX alpha 2 chain JBrowse link NW_004955537 139,481 152,866 RGD:9068941
G Col9a3 collagen type IX alpha 3 chain JBrowse link NW_004955528 1,286,314 1,305,863 RGD:9068941
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 JBrowse link NW_004955524 773,997 782,911 RGD:9068941
G Colgalt2 collagen beta(1-O)galactosyltransferase 2 JBrowse link NW_004955406 22,674,692 22,775,079 RGD:9068941
G Cp ceruloplasmin JBrowse link NW_004955448 470,063 522,909 RGD:9068941
G Crtap cartilage associated protein JBrowse link NW_004955421 384,668 408,214 RGD:9068941
G Csf1 colony stimulating factor 1 JBrowse link NW_004955435 13,404,236 13,423,059 RGD:9068941
G Cst3 cystatin C JBrowse link NW_004955415 30,507,972 30,512,109 RGD:9068941
G Ctsc cathepsin C JBrowse link NW_004955414 5,062,355 5,092,631 RGD:9068941
G Ctsz cathepsin Z JBrowse link NW_004955445 586,901 597,753 RGD:9068941
G Dag1 dystroglycan 1 JBrowse link NW_004955532 1,446,553 1,465,310 RGD:9068941
G Dbi diazepam binding inhibitor, acyl-CoA binding protein JBrowse link NW_004955459 10,342,528 10,347,700 RGD:9068941
G Dmp1 dentin matrix acidic phosphoprotein 1 JBrowse link NW_004955474 2,188,090 2,200,284 RGD:9068941
G Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 JBrowse link NW_004955420 21,097,292 21,113,053 RGD:9068941
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link NW_004955410 12,814,993 12,820,852 RGD:9068941
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 JBrowse link NW_004955403 14,681,015 14,717,060 RGD:9068941
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 JBrowse link NW_004955404 14,361,540 14,412,533 RGD:9068941
G Ebi3 Epstein-Barr virus induced 3 JBrowse link NW_004955495 4,609,841 4,615,686 RGD:9068941
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link NW_004955422 26,243,034 26,271,849 RGD:9068941
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link NW_004955406 23,329,400 23,401,282 RGD:9068941
G Enam enamelin JBrowse link NW_004955447 2,331,251 2,345,459 RGD:9068941
G Eogt EGF domain specific O-linked N-acetylglucosamine transferase JBrowse link NW_004955421 18,845,626 18,879,008 RGD:9068941
G Erap1 endoplasmic reticulum aminopeptidase 1 JBrowse link NW_004955418 15,827,560 15,859,720 RGD:9068941
G Erlec1 endoplasmic reticulum lectin 1 JBrowse link NW_004955441 19,535,425 19,557,960 RGD:9068941
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha JBrowse link NW_004955409 10,495,892 10,533,383 RGD:9068941
G Erp27 endoplasmic reticulum protein 27 JBrowse link NW_004955413 11,650,920 11,670,127 RGD:9068941
G Erp29 endoplasmic reticulum protein 29 JBrowse link NW_004955482 8,572,227 8,579,589 RGD:9068941
G Erp44 endoplasmic reticulum protein 44 JBrowse link NW_004955419 25,584,404 25,665,590 RGD:9068941
G Esd esterase D JBrowse link NW_004955431 524,491 551,871 RGD:9068941
G Eva1a eva-1 homolog A, regulator of programmed cell death JBrowse link NW_004955424 10,308,586 10,358,477 RGD:9068941
G F10 coagulation factor X JBrowse link NW_004955404 666,142 682,598 RGD:9068941
G F2 coagulation factor II, thrombin JBrowse link NW_004955422 1,356,675 1,367,788 RGD:9068941
G F5 coagulation factor V JBrowse link NW_004955462 7,695,004 7,757,832 RGD:9068941
G F7 coagulation factor VII JBrowse link NW_004955404 685,170 692,797 RGD:9068941
G F8 coagulation factor VIII JBrowse link NW_004955594 658,686 800,101 RGD:9068941
G F9 coagulation factor IX JBrowse link NW_004955489 5,747,718 5,780,899 RGD:9068941
G Fam20c FAM20C golgi associated secretory pathway kinase JBrowse link NW_004955460 8,142,325 8,192,044 RGD:9068941
G Fbn1 fibrillin 1 JBrowse link NW_004955409 5,281,603 5,502,547 RGD:9068941
G Fga fibrinogen alpha chain JBrowse link NW_004955471 8,806,964 8,814,671 RGD:9068941
G Fgf23 fibroblast growth factor 23 JBrowse link NW_004955413 2,182,459 2,192,279 RGD:9068941
G Fgg fibrinogen gamma chain JBrowse link NW_004955471 8,786,910 8,794,947 RGD:9068941
G Fkbp10 FKBP prolyl isomerase 10 JBrowse link NW_004955451 16,025,008 16,031,950 RGD:9068941
G Fkbp14 FKBP prolyl isomerase 14 JBrowse link NW_004955410 31,313,637 31,325,544 RGD:9068941
G Fkbp7 FKBP prolyl isomerase 7 JBrowse link NW_004955403 18,373,372 18,385,172 RGD:9068941
G Flt3 fms related receptor tyrosine kinase 3 JBrowse link NW_004955497 7,357,533 7,441,215 RGD:9068941
G Fmo1 flavin containing dimethylaniline monoxygenase 1 JBrowse link NW_004955406 11,882,656 11,915,875 RGD:9068941
G Fn1 fibronectin 1 JBrowse link NW_004955457 629,599 694,948 RGD:9068941
G Foxred2 FAD dependent oxidoreductase domain containing 2 JBrowse link NW_004955413 23,070,715 23,091,402 RGD:9068941
G Fstl1 follistatin like 1 JBrowse link NW_004955427 19,952,823 20,003,832 RGD:9068941
G Fstl3 follistatin like 3 JBrowse link NW_004955495 7,077,424 7,082,768 RGD:9068941
G Fuca2 alpha-L-fucosidase 2 JBrowse link NW_004955436 16,896,629 16,912,406 RGD:9068941
G Ganab glucosidase II alpha subunit JBrowse link NW_004955599 556,510 569,891 RGD:9068941
G Gas6 growth arrest specific 6 JBrowse link NW_004955404 276,397 303,864 RGD:9068941
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link NW_004955485 8,006,161 8,126,074 RGD:9068941
G Gcg glucagon JBrowse link NW_004955449 11,708,152 11,716,429 RGD:9068941
G Ghrl ghrelin and obestatin prepropeptide JBrowse link NW_004955561 1,676,475 1,682,205 RGD:9068941
G Gip gastric inhibitory polypeptide JBrowse link NW_004955451 12,390,938 12,396,599 RGD:9068941
G Golm1 golgi membrane protein 1 JBrowse link NW_004955432 1,434,759 1,497,916 RGD:9068941
G Gpc3 glypican 3 JBrowse link NW_004955473 969,627 1,431,706 RGD:9068941
G Gpx7 glutathione peroxidase 7 JBrowse link NW_004955464 6,560,198 6,566,763 RGD:9068941
G Gpx8 glutathione peroxidase 8 (putative) JBrowse link NW_004955446 12,498,276 12,504,890 RGD:9068941
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase JBrowse link NW_004955486 4,088,354 4,115,077 RGD:9068941
G Hrc histidine rich calcium binding protein JBrowse link NW_004955559 1,583,661 1,587,457 RGD:9068941
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link NW_004955405 38,629,691 38,645,202 RGD:9068941
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link NW_004955419 3,055,420 3,060,208 RGD:9068941
G Hyou1 hypoxia up-regulated 1 JBrowse link NW_004955412 20,149,104 20,161,378 RGD:9068941
G Igfbp1 insulin like growth factor binding protein 1 JBrowse link NW_004955456 6,810,461 6,814,944 RGD:9068941
G Igfbp3 insulin like growth factor binding protein 3 JBrowse link NW_004955456 6,795,560 6,802,147 RGD:9068941
G Igfbp4 insulin like growth factor binding protein 4 JBrowse link NW_004955451 15,027,184 15,029,830 RGD:9068941
G Igfbp5 insulin like growth factor binding protein 5 JBrowse link NW_004955453 16,530,110 16,550,733 RGD:9068941
G Igfbp7 insulin like growth factor binding protein 7 JBrowse link NW_004955447 14,048,834 14,110,264 RGD:9068941
G Il12a interleukin 12A JBrowse link NW_004955448 10,611,131 10,617,911 RGD:9068941
G Il12b interleukin 12B JBrowse link NW_004955408 13,302,506 13,316,300 RGD:9068941
G Il23a interleukin 23 subunit alpha JBrowse link NW_004955458 3,946,964 3,949,180 RGD:9068941
G Il27 interleukin 27 JBrowse link NW_004955493 6,712,005 6,717,417 RGD:9068941
G Il6 interleukin 6 JBrowse link NW_004955410 25,079,835 25,084,390 RGD:9068941
G Ins insulin JBrowse link NW_004955422 13,909,408 13,910,419 RGD:9068941
G Itih2 inter-alpha-trypsin inhibitor heavy chain 2 JBrowse link NW_004955421 24,149,081 24,189,810 RGD:9068941
G Jmjd8 jumonji domain containing 8 JBrowse link NW_004955442 16,519,394 16,521,106 RGD:9068941
G Kng1 kininogen 1 JBrowse link NW_004955420 20,989,197 21,016,084 RGD:9068941
G Ktn1 kinectin 1 JBrowse link NW_004955466 13,664,312 13,747,368 RGD:9068941
G Lamb1 laminin subunit beta 1 JBrowse link NW_004955410 12,241,235 12,305,433 RGD:9068941
G Lamb2 laminin subunit beta 2 JBrowse link NW_004955532 1,115,412 1,127,264 RGD:9068941
G Lamc1 laminin subunit gamma 1 JBrowse link NW_004955406 21,863,836 21,990,161 RGD:9068941
G Lgals1 galectin 1 JBrowse link NW_004955413 24,072,086 24,075,452 RGD:9068941
G Lipc lipase C, hepatic type JBrowse link NW_004955450 15,947,869 16,062,449 RGD:9068941
G LOC102016571 cytochrome P450 2W1 JBrowse link NW_004955460 8,705,068 8,711,266 RGD:9068941
G LOC102021597 alpha-1-antiproteinase S-like JBrowse link NW_004955438 17,920,200 17,929,105 RGD:9068941
G Ltbp1 latent transforming growth factor beta binding protein 1 JBrowse link NW_004955441 1,405,340 1,626,668 RGD:9068941
G Manf mesencephalic astrocyte derived neurotrophic factor JBrowse link NW_004955532 3,075,195 3,077,505 RGD:9068941
G Matn3 matrilin 3 JBrowse link NW_004955469 2,548,443 2,568,497 RGD:9068941
G Mbtps1 membrane bound transcription factor peptidase, site 1 JBrowse link NW_004955564 176,230 226,555 RGD:9068941
G Meltf melanotransferrin JBrowse link NW_004955420 13,036,767 13,055,477 RGD:9068941
G Men1 menin 1 JBrowse link NW_004955422 20,356,491 20,363,374 RGD:9068941
G Mepe matrix extracellular phosphoglycoprotein JBrowse link NW_004955474 2,048,883 2,064,515 RGD:9068941
G Mfge8 milk fat globule EGF and factor V/VIII domain containing JBrowse link NW_004955416 16,092,263 16,103,097 RGD:9068941
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A JBrowse link NW_004955470 5,060,457 5,189,021 RGD:9068941
G Mia3 MIA SH3 domain ER export factor 3 JBrowse link NW_004955520 1,853,145 1,890,338 RGD:9068941
G Minpp1 multiple inositol-polyphosphate phosphatase 1 JBrowse link NW_004955425 5,329,968 5,359,634 RGD:9068941
G Mttp microsomal triglyceride transfer protein JBrowse link NW_004955496 7,963,323 8,022,393 RGD:9068941
G Mxra8 matrix remodeling associated 8 JBrowse link NW_004955486 9,452,707 9,456,640 RGD:9068941
G Mydgf myeloid derived growth factor JBrowse link NW_004955495 4,320,532 4,330,921 RGD:9068941
G Mzb1 marginal zone B and B1 cell specific protein JBrowse link NW_004955418 1,170,365 1,172,581 RGD:9068941
G Notum notum, palmitoleoyl-protein carboxylesterase JBrowse link NW_004955506 1,203,309 1,212,938 RGD:9068941
G Nucb1 nucleobindin 1 JBrowse link NW_004955559 1,723,986 1,739,776 RGD:9068941
G Os9 OS9 endoplasmic reticulum lectin JBrowse link NW_004955458 5,407,709 5,432,646 RGD:9068941
G P3h1 prolyl 3-hydroxylase 1 JBrowse link NW_004955537 2,276,080 2,292,303 RGD:9068941
G P3h2 prolyl 3-hydroxylase 2 JBrowse link NW_004955420 17,964,153 18,118,442 RGD:9068941
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 JBrowse link NW_004955437 18,604,525 18,668,800 RGD:9068941
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 JBrowse link NW_004955408 3,574,860 3,607,015 RGD:9068941
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 JBrowse link NW_004955414 17,344,512 17,376,564 RGD:9068941
G P4hb prolyl 4-hydroxylase subunit beta JBrowse link NW_004955506 1,307,932 1,322,011 RGD:9068941
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link NW_004955464 4,424,583 4,439,805 RGD:9068941
G Pdgfa platelet derived growth factor subunit A JBrowse link NW_004955460 8,328,400 8,346,755 RGD:9068941
G Pdgfb platelet derived growth factor subunit B JBrowse link NW_004955413 25,150,702 25,166,987 RGD:9068941
G Pdgfc platelet derived growth factor C JBrowse link NW_004955471 10,318,683 10,500,624 RGD:9068941
G Pdgfd platelet derived growth factor D JBrowse link NW_004955412 6,868,995 7,093,353 RGD:9068941
G Pdia2 protein disulfide isomerase family A member 2 JBrowse link NW_004955442 16,898,563 16,901,867 RGD:9068941
G Pdia3 protein disulfide isomerase family A member 3 JBrowse link NW_004955416 10,197,957 10,221,104 RGD:9068941
G Pdia4 protein disulfide isomerase family A member 4 JBrowse link NW_004955491 4,344,874 4,360,205 RGD:9068941
G Pdia5 protein disulfide isomerase family A member 5 JBrowse link NW_004955427 22,268,730 22,356,123 RGD:9068941
G Pdia6 protein disulfide isomerase family A member 6 JBrowse link NW_004955487 5,735,698 5,744,601 RGD:9068941
G Penk proenkephalin JBrowse link NW_004955454 15,425,712 15,426,685 RGD:9068941
G Plaur plasminogen activator, urokinase receptor JBrowse link NW_004955555 1,378,505 1,393,395 RGD:9068941
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 JBrowse link NW_004955456 16,082,424 16,090,773 RGD:9068941
G Pnpla2 patatin like phospholipase domain containing 2 JBrowse link NW_004955476 11,304,660 11,309,755 RGD:9068941
G Poglut1 protein O-glucosyltransferase 1 JBrowse link NW_004955427 19,188,512 19,206,050 RGD:9068941
G Poglut2 protein O-glucosyltransferase 2 JBrowse link NW_004955404 8,358,542 8,374,216 RGD:9068941
G Poglut3 protein O-glucosyltransferase 3 JBrowse link NW_004955412 10,582,169 10,598,153 RGD:9068941
G Ppib peptidylprolyl isomerase B JBrowse link NW_004955450 11,241,279 11,246,628 RGD:9068941
G Prkcsh protein kinase C substrate 80K-H JBrowse link NW_004955495 2,331,075 2,338,479 RGD:9068941
G Proc protein C, inactivator of coagulation factors Va and VIIIa JBrowse link NW_004955459 3,097,229 3,105,566 RGD:9068941
G Proz protein Z, vitamin K dependent plasma glycoprotein JBrowse link NW_004955404 647,217 657,256 RGD:9068941
G Prss23 serine protease 23 JBrowse link NW_004955414 6,202,383 6,213,521 RGD:9068941
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link NW_004955406 25,077,988 25,086,259 RGD:9068941
G Ptprn2 protein tyrosine phosphatase receptor type N2 JBrowse link NW_004955579 366,441 862,837 RGD:9068941
G Qsox1 quiescin sulfhydryl oxidase 1 JBrowse link NW_004955406 19,363,938 19,402,134 RGD:9068941
G Rcn1 reticulocalbin 1 JBrowse link NW_004955476 10,280,669 10,289,668 RGD:9068941
G Rcn2 reticulocalbin 2 JBrowse link NW_004955450 1,838,836 1,854,045 RGD:9068941
G Rcn3 reticulocalbin 3 JBrowse link NW_004955559 1,309,621 1,319,925 RGD:9068941
G Rdh5 retinol dehydrogenase 5 JBrowse link NW_004955458 3,356,324 3,361,701 RGD:9068941
G Rnaset2 ribonuclease T2 JBrowse link NW_004955439 15,098,210 15,122,015 RGD:9068941
G Scg2 secretogranin II JBrowse link NW_004955453 10,361,440 10,366,956 RGD:9068941
G Scg3 secretogranin III JBrowse link NW_004955409 2,876,355 2,907,363 RGD:9068941
G Sdc2 syndecan 2 JBrowse link NW_004955417 12,462,354 12,563,374 RGD:9068941
G Sdf2l1 stromal cell derived factor 2 like 1 JBrowse link NW_004955442 17,468,302 17,470,296 RGD:9068941
G Selenof selenoprotein F JBrowse link NW_004955423 7,253,980 7,285,442 RGD:9068941
G Selenom selenoprotein M JBrowse link NW_004955455 5,294,317 5,303,621 RGD:9068941
G Serpina10 serpin family A member 10 JBrowse link NW_004955438 16,335,201 16,345,093 RGD:9068941
G Serpinc1 serpin family C member 1 JBrowse link NW_004955406 14,024,183 14,036,206 RGD:9068941
G Serpind1 serpin family D member 1 JBrowse link NW_004955442 19,525,411 19,537,986 RGD:9068941
G Serpinh1 serpin family H member 1 JBrowse link NW_004955414 16,284,845 16,292,828 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Shisa5 shisa family member 5 JBrowse link NW_004955532 535,992 544,542 RGD:9068941
G Sil1 SIL1 nucleotide exchange factor JBrowse link NW_004955418 1,322,644 1,583,352 RGD:9068941
G Slc27a2 solute carrier family 27 member 2 JBrowse link NW_004955409 4,077,685 4,112,828 RGD:9068941
G Sparcl1 SPARC like 1 JBrowse link NW_004955474 2,352,662 2,387,237 RGD:9068941
G Spon1 spondin 1 JBrowse link NW_004955414 29,180,246 29,475,547 RGD:9068941
G Spp1 secreted phosphoprotein 1 JBrowse link NW_004955474 1,914,477 1,922,025 RGD:9068941
G Spp2 secreted phosphoprotein 2 JBrowse link NW_004955453 2,130,606 2,158,603 RGD:9068941
G Stc2 stanniocalcin 2 JBrowse link NW_004955408 25,937,174 25,950,221 RGD:9068941
G Sts steroid sulfatase JBrowse link NW_004955499 5,180,451 5,347,862 RGD:9068941
G Sumf1 sulfatase modifying factor 1 JBrowse link NW_004955421 8,982,059 9,050,936 RGD:9068941
G Sumf2 sulfatase modifying factor 2 JBrowse link NW_004955456 8,238,301 8,251,682 RGD:9068941
G Tgoln2 trans-golgi network protein 2 JBrowse link NW_004955424 2,122,410 2,131,734 RGD:9068941
G Thbs1 thrombospondin 1 JBrowse link NW_004955416 6,490,034 6,506,419 RGD:9068941
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link NW_004955516 507,113 511,360 RGD:9068941
G Tmem132a transmembrane protein 132A JBrowse link NW_004955511 5,567,413 5,574,759 RGD:9068941
G Tnc tenascin C JBrowse link NW_004955419 12,569,620 12,662,897 RGD:9068941
G Tor1a torsin family 1 member A JBrowse link NW_004955513 30,655 36,299 RGD:9068941
G Tor1b torsin family 1 member B JBrowse link NW_004955513 23,118 29,401 RGD:9068941
G Tor2a torsin family 2 member A JBrowse link NW_004955419 922,901 926,624 RGD:9068941
G Tor3a torsin family 3 member A JBrowse link NW_004955406 18,408,095 18,422,098 RGD:9068941
G Tor4a torsin family 4 member A JBrowse link NW_004955513 5,263,299 5,265,622 RGD:9068941
G Tspan14 tetraspanin 14 JBrowse link NW_004955510 463,548 490,635 RGD:9068941
G Tspan15 tetraspanin 15 JBrowse link NW_004955437 21,643,018 21,687,355 RGD:9068941
G Tspan33 tetraspanin 33 JBrowse link NW_004955479 9,920,192 9,941,395 RGD:9068941
G Tspan5 tetraspanin 5 JBrowse link NW_004955405 8,725,761 8,759,784 RGD:9068941
G Txndc12 thioredoxin domain containing 12 JBrowse link NW_004955464 7,070,555 7,094,991 RGD:9068941
G Txndc16 thioredoxin domain containing 16 JBrowse link NW_004955409 10,593,693 10,680,381 RGD:9068941
G Txndc5 thioredoxin domain containing 5 JBrowse link NW_004955465 6,034,006 6,053,779 RGD:9068941
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 JBrowse link NW_004955459 2,347,946 2,461,174 RGD:9068941
G Uggt2 UDP-glucose glycoprotein glucosyltransferase 2 JBrowse link NW_004955404 14,165,686 14,354,207 RGD:9068941
G Vcan versican JBrowse link NW_004955418 26,967,595 27,078,430 RGD:9068941
G Vcpip1 valosin containing protein interacting protein 1 JBrowse link NW_004955444 12,542,479 12,567,971 RGD:9068941
G Vgf VGF nerve growth factor inducible JBrowse link NW_004955456 16,119,073 16,126,968 RGD:9068941
G Vwa1 von Willebrand factor A domain containing 1 JBrowse link NW_004955486 9,365,920 9,369,117 RGD:9068941
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link NW_004955514 3,902,508 3,924,281 RGD:9068941
G Wnt1 Wnt family member 1 JBrowse link NW_004955500 7,797,063 7,811,142 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
G Wnt4 Wnt family member 4 JBrowse link NW_004955452 2,319,446 2,344,740 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004955430 5,304,817 5,325,684 RGD:9068941
G Wnt5b Wnt family member 5B JBrowse link NW_004955454 4,158,648 4,192,709 RGD:9068941
G Wnt6 Wnt family member 6 JBrowse link NW_004955453 14,547,427 14,560,001 RGD:9068941
G Wnt7a Wnt family member 7A JBrowse link NW_004955429 12,647,993 12,693,998 RGD:9068941
G Wnt7b Wnt family member 7B JBrowse link NW_004955413 30,146,185 30,185,693 RGD:9068941
perinuclear endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clu clusterin JBrowse link NW_004955403 50,160,598 50,175,876 RGD:9068941
rough endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase (Cartwright blood group) JBrowse link NW_004955573 79,606 85,799 RGD:11560526
G Edn1 endothelin 1 JBrowse link NW_004955465 2,287,906 2,314,945 RGD:9068941
G Lrpap1 LDL receptor related protein associated protein 1 JBrowse link NW_004955514 2,195,228 2,208,258 RGD:9068941
G Vtn vitronectin JBrowse link NW_004955481 4,765,078 4,768,027 RGD:9068941
sarcoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asph aspartate beta-hydroxylase JBrowse link NW_004955444 17,116,060 17,320,966 RGD:9068941
G Calr calreticulin JBrowse link NW_004955415 31,985,147 31,989,372 RGD:9068941
G Calu calumenin JBrowse link NW_004955479 9,541,574 9,572,189 RGD:9068941
G Casq1 calsequestrin 1 JBrowse link NW_004955468 11,967,678 11,978,836 RGD:9068941
G Casq2 calsequestrin 2 JBrowse link NW_004955435 18,941,975 18,996,027 RGD:9068941
G Hrc histidine rich calcium binding protein JBrowse link NW_004955559 1,583,661 1,587,457 RGD:9068941
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link NW_004955405 38,629,691 38,645,202 RGD:9068941
G Manf mesencephalic astrocyte derived neurotrophic factor JBrowse link NW_004955532 3,075,195 3,077,505 RGD:9068941
G Srl sarcalumenin JBrowse link NW_004955442 13,200,237 13,242,816 RGD:9068941
G Trdn triadin JBrowse link NW_004955436 4,963,945 5,266,727 RGD:9068941
terminal cisterna lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casq1 calsequestrin 1 JBrowse link NW_004955468 11,967,678 11,978,836 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15283
    intracellular 12521
      cytoplasm 10257
        endoplasmic reticulum 1311
          endoplasmic reticulum lumen 298
            cortical endoplasmic reticulum lumen 0
            luminal surveillance complex 0
            mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
            perinuclear endoplasmic reticulum lumen 1
            rough endoplasmic reticulum lumen 4
            sarcoplasmic reticulum lumen + 10
            smooth endoplasmic reticulum lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 15283
    cellular anatomical entity 15156
      organelle 11927
        intracellular organelle 11039
          intracellular membrane-bounded organelle 9516
            endoplasmic reticulum 1311
              endoplasmic reticulum lumen 298
                cortical endoplasmic reticulum lumen 0
                luminal surveillance complex 0
                mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
                perinuclear endoplasmic reticulum lumen 1
                rough endoplasmic reticulum lumen 4
                sarcoplasmic reticulum lumen + 10
                smooth endoplasmic reticulum lumen 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.