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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum lumen
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Accession:GO:0005788 term browser browse the term
Definition:The volume enclosed by the membranes of the endoplasmic reticulum.
Synonyms:exact_synonym: ER cisterna;   ER lumen;   cisternal lumen;   endoplasmic reticulum cisterna
 alt_id: GO:0016022


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endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAM10 ADAM metallopeptidase domain 10 JBrowse link 15 58,588,809 58,749,707 RGD:2290271
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 JBrowse link 9 133,414,339 133,459,403 RGD:2290271
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 JBrowse link 21 26,917,922 26,967,758 RGD:2290271
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 JBrowse link 15 78,759,203 78,811,476 RGD:2290271
G ADAMTSL1 ADAMTS like 1 JBrowse link 9 17,906,515 18,910,950 RGD:2290271
G ADAMTSL4 ADAMTS like 4 JBrowse link 1 150,549,369 150,560,937 RGD:2290271
G AFP alpha fetoprotein JBrowse link 4 73,436,221 73,456,174 RGD:2290271
G AHSG alpha 2-HS glycoprotein JBrowse link 3 186,613,060 186,621,318 RGD:2290271
G ALB albumin JBrowse link 4 73,404,287 73,421,482 RGD:2290271
G ALG12 ALG12 alpha-1,6-mannosyltransferase JBrowse link 22 49,860,163 49,918,469 RGD:2290271
G AMBN ameloblastin JBrowse link 4 70,592,256 70,607,288 RGD:2290271
G AMELX amelogenin X-linked JBrowse link X 11,293,413 11,304,149 RGD:2290271
G AMTN amelotin JBrowse link 4 70,518,569 70,532,743 RGD:2290271
G ANO8 anoctamin 8 JBrowse link 19 17,323,223 17,334,855 RGD:2290271
G APLP2 amyloid beta precursor like protein 2 JBrowse link 11 130,069,894 130,144,811 RGD:2290271
G APOA1 apolipoprotein A1 JBrowse link 11 116,835,751 116,837,950 RGD:2290271
G APOA2 apolipoprotein A2 JBrowse link 1 161,222,292 161,223,628 RGD:2290271
G APOA4 apolipoprotein A4 JBrowse link 11 116,820,700 116,823,304 RGD:2290271
G APOA5 apolipoprotein A5 JBrowse link 11 116,789,367 116,792,420 RGD:2290271
G APOB apolipoprotein B JBrowse link 2 21,001,429 21,044,073 RGD:2290271
G APOE apolipoprotein E JBrowse link 19 44,905,796 44,909,395 RGD:2290271
G APOL1 apolipoprotein L1 JBrowse link 22 36,253,071 36,267,531 RGD:2290271
G APP amyloid beta precursor protein JBrowse link 21 25,880,550 26,171,128 RGD:2290271
G ARSA arylsulfatase A JBrowse link 22 50,622,754 50,628,152 RGD:2290271
G ARSB arylsulfatase B JBrowse link 5 78,777,209 78,986,087 RGD:2290271
G ARSD arylsulfatase D JBrowse link X 2,903,972 2,929,345 RGD:2290271
G ARSF arylsulfatase F JBrowse link X 3,040,234 3,112,729 RGD:2290271
G ARSG arylsulfatase G JBrowse link 17 68,259,170 68,452,019 RGD:2290271
G ARSH arylsulfatase family member H JBrowse link X 3,006,546 3,034,111 RGD:2290271
G ARSI arylsulfatase family member I JBrowse link 5 150,296,343 150,302,905 RGD:2290271
G ARSJ arylsulfatase family member J JBrowse link 4 113,899,929 113,980,464 RGD:2290271
G ARSK arylsulfatase family member K JBrowse link 5 95,555,101 95,605,102 RGD:2290271
G ARSL arylsulfatase L JBrowse link X 2,934,521 2,968,312 RGD:2290271
G B2M beta-2-microglobulin JBrowse link 15 44,711,492 44,718,877 RGD:2290271
G BACE1 beta-secretase 1 JBrowse link 11 117,285,207 117,316,256 RGD:2290271
G BCHE butyrylcholinesterase JBrowse link 3 165,772,904 165,837,451 RGD:2290271
G BGLAP bone gamma-carboxyglutamate protein JBrowse link 1 156,242,184 156,243,317 RGD:2290271
G BMP15 bone morphogenetic protein 15 JBrowse link X 50,910,735 50,916,641 RGD:2290271
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:2290271
G BPIFB2 BPI fold containing family B member 2 JBrowse link 20 33,007,704 33,023,703 RGD:2290271
G C3 complement C3 JBrowse link 19 6,677,704 6,720,650 RGD:2290271
G C4A complement C4A (Rodgers blood group) JBrowse link 6 31,982,057 32,002,681 RGD:2290271
G C4B complement C4B (Chido blood group) JBrowse link 6 32,014,795 32,035,418 RGD:2290271
G CALR calreticulin JBrowse link 19 12,938,609 12,944,489 RGD:2290271
G CALR3 calreticulin 3 JBrowse link 19 16,479,061 16,496,167 RGD:2290271
G CALU calumenin JBrowse link 7 128,739,359 128,773,400 RGD:2290271
G CANX calnexin JBrowse link 5 179,678,646 179,731,641 RGD:2290271
G CCN1 cellular communication network factor 1 JBrowse link 1 85,580,761 85,583,950 RGD:2290271
G CD4 CD4 molecule JBrowse link 12 6,789,528 6,820,810 RGD:2290271
G CDH2 cadherin 2 JBrowse link 18 27,932,878 28,177,130 RGD:2290271
G CERCAM cerebral endothelial cell adhesion molecule JBrowse link 9 128,405,994 128,437,351 RGD:2290271
G CES1 carboxylesterase 1 JBrowse link 16 55,802,851 55,833,127 RGD:2290271
G CES2 carboxylesterase 2 JBrowse link 16 66,934,471 66,945,096 RGD:2290271
G CES3 carboxylesterase 3 JBrowse link 16 66,961,266 66,975,149 RGD:2290271
G CFP complement factor properdin JBrowse link X 47,623,282 47,630,305 RGD:2290271
G CHGB chromogranin B JBrowse link 20 5,911,510 5,925,353 RGD:2290271
G CHRDL1 chordin like 1 JBrowse link X 110,673,856 110,795,817 RGD:2290271
G CKAP4 cytoskeleton associated protein 4 JBrowse link 12 106,237,881 106,248,020 RGD:2290271
G CLN6 CLN6 transmembrane ER protein JBrowse link 15 68,206,992 68,229,728 RGD:2290271
G CNPY3 canopy FGF signaling regulator 3 JBrowse link 6 42,928,002 42,939,294 RGD:2290271
G COL10A1 collagen type X alpha 1 chain JBrowse link 6 116,118,909 116,219,937 RGD:2290271
G COL11A1 collagen type XI alpha 1 chain JBrowse link 1 102,876,467 103,108,580 RGD:2290271
G COL11A2 collagen type XI alpha 2 chain JBrowse link 6 33,162,692 33,193,009 RGD:2290271
G COL12A1 collagen type XII alpha 1 chain JBrowse link 6 75,084,326 75,206,262 RGD:2290271
G COL13A1 collagen type XIII alpha 1 chain JBrowse link 10 69,801,835 69,959,144 RGD:2290271
G COL14A1 collagen type XIV alpha 1 chain JBrowse link 8 120,124,467 120,373,573 RGD:2290271
G COL15A1 collagen type XV alpha 1 chain JBrowse link 9 98,943,392 99,070,787 RGD:2290271
G COL16A1 collagen type XVI alpha 1 chain JBrowse link 1 31,652,263 31,704,162 RGD:2290271
G COL17A1 collagen type XVII alpha 1 chain JBrowse link 10 104,031,286 104,085,880 RGD:2290271
G COL18A1 collagen type XVIII alpha 1 chain JBrowse link 21 45,405,165 45,513,720 RGD:2290271
G COL19A1 collagen type XIX alpha 1 chain JBrowse link 6 69,866,556 70,215,063 RGD:2290271
G COL1A1 collagen type I alpha 1 chain JBrowse link 17 50,184,096 50,201,649 RGD:2290271
G COL1A2 collagen type I alpha 2 chain JBrowse link 7 94,394,895 94,431,227 RGD:2290271
G COL20A1 collagen type XX alpha 1 chain JBrowse link 20 63,293,169 63,334,851 RGD:2290271
G COL21A1 collagen type XXI alpha 1 chain JBrowse link 6 56,056,590 56,394,128 RGD:2290271
G COL22A1 collagen type XXII alpha 1 chain JBrowse link 8 138,588,235 138,914,087 RGD:2290271
G COL23A1 collagen type XXIII alpha 1 chain JBrowse link 5 178,237,616 178,590,393 RGD:2290271
G COL24A1 collagen type XXIV alpha 1 chain JBrowse link 1 85,728,507 86,156,987 RGD:2290271
G COL25A1 collagen type XXV alpha 1 chain JBrowse link 4 108,808,725 109,302,737 RGD:2290271
G COL26A1 collagen type XXVI alpha 1 chain JBrowse link 7 101,362,369 101,559,024 RGD:2290271
G COL27A1 collagen type XXVII alpha 1 chain JBrowse link 9 114,154,271 114,312,511 RGD:2290271
G COL28A1 collagen type XXVIII alpha 1 chain JBrowse link 7 7,338,542 7,542,094 RGD:2290271
G COL2A1 collagen type II alpha 1 chain JBrowse link 12 47,972,967 48,006,212 RGD:2290271
G COL3A1 collagen type III alpha 1 chain JBrowse link 2 188,974,373 189,012,746 RGD:2290271
G COL4A1 collagen type IV alpha 1 chain JBrowse link 13 110,148,963 110,307,157 RGD:2290271
G COL4A2 collagen type IV alpha 2 chain JBrowse link 13 110,307,284 110,513,209 RGD:2290271
G COL4A3 collagen type IV alpha 3 chain JBrowse link 2 227,164,589 227,314,792 RGD:2290271
G COL4A4 collagen type IV alpha 4 chain JBrowse link 2 226,970,293 227,164,482 RGD:2290271
G COL4A5 collagen type IV alpha 5 chain JBrowse link X 108,439,838 108,697,545 RGD:2290271
G COL4A6 collagen type IV alpha 6 chain JBrowse link X 108,155,607 108,439,493 RGD:2290271
G COL5A1 collagen type V alpha 1 chain JBrowse link 9 134,641,789 134,844,843 RGD:2290271
G COL5A2 collagen type V alpha 2 chain JBrowse link 2 189,031,898 189,225,301 RGD:2290271
G COL5A3 collagen type V alpha 3 chain JBrowse link 19 9,959,561 10,010,532 RGD:2290271
G COL6A1 collagen type VI alpha 1 chain JBrowse link 21 45,981,770 46,005,048 RGD:2290271
G COL6A2 collagen type VI alpha 2 chain JBrowse link 21 46,098,071 46,132,849 RGD:2290271
G COL6A3 collagen type VI alpha 3 chain JBrowse link 2 237,324,012 237,434,822 RGD:2290271
G COL7A1 collagen type VII alpha 1 chain JBrowse link 3 48,564,073 48,595,302 RGD:2290271
G COL8A1 collagen type VIII alpha 1 chain JBrowse link 3 99,638,594 99,799,217 RGD:2290271
G COL8A2 collagen type VIII alpha 2 chain JBrowse link 1 36,095,239 36,126,207 RGD:2290271
G COL9A1 collagen type IX alpha 1 chain JBrowse link 6 70,215,061 70,303,084 RGD:2290271
G COL9A2 collagen type IX alpha 2 chain JBrowse link 1 40,300,487 40,317,653 RGD:2290271
G COL9A3 collagen type IX alpha 3 chain JBrowse link 20 62,817,050 62,841,159 RGD:2290271
G COLGALT1 collagen beta(1-O)galactosyltransferase 1 JBrowse link 19 17,555,649 17,583,159 RGD:2290271
G COLGALT2 collagen beta(1-O)galactosyltransferase 2 JBrowse link 1 183,929,662 184,037,728 RGD:2290271
G CP ceruloplasmin JBrowse link 3 149,162,410 149,222,008 RGD:2290271
G CRTAP cartilage associated protein JBrowse link 3 33,114,014 33,147,773 RGD:2290271
G CSF1 colony stimulating factor 1 JBrowse link 1 109,910,506 109,930,992 RGD:2290271
G CST3 cystatin C JBrowse link 20 23,626,706 23,637,955 RGD:2290271
G CTSC cathepsin C JBrowse link 11 88,293,592 88,337,736 RGD:2290271
G CTSZ cathepsin Z JBrowse link 20 58,995,185 59,007,254 RGD:2290271
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 JBrowse link 7 983,155 989,640 RGD:2290271
G DAG1 dystroglycan 1 JBrowse link 3 49,468,703 49,535,618 RGD:2290271
G DBI diazepam binding inhibitor, acyl-CoA binding protein JBrowse link 2 119,366,977 119,372,560 RGD:2290271
G DMP1 dentin matrix acidic phosphoprotein 1 JBrowse link 4 87,650,280 87,664,357 RGD:2290271
G DNAJB11 DnaJ heat shock protein family (Hsp40) member B11 JBrowse link 3 186,570,676 186,585,800 RGD:2290271
G DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link 7 108,569,874 108,574,850 RGD:2290271
G DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 JBrowse link 2 182,716,257 182,794,464 RGD:2290271
G DNAJC3 DnaJ heat shock protein family (Hsp40) member C3 JBrowse link 13 95,677,139 95,794,988 RGD:2290271
G EBI3 Epstein-Barr virus induced 3 JBrowse link 19 4,229,196 4,237,539 RGD:2290271
G EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 20 35,115,364 35,147,336 RGD:2290271
G EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link 1 184,690,237 184,754,907 RGD:2290271
G ENAM enamelin JBrowse link 4 70,627,471 70,646,824 RGD:2290271
G EOGT EGF domain specific O-linked N-acetylglucosamine transferase JBrowse link 3 68,975,220 69,013,961 RGD:2290271
G ERAP1 endoplasmic reticulum aminopeptidase 1 JBrowse link 5 96,760,273 96,935,983 RGD:2290271
G ERAP2 endoplasmic reticulum aminopeptidase 2 JBrowse link 5 96,875,939 96,919,716 RGD:2290271
G ERLEC1 endoplasmic reticulum lectin 1 JBrowse link 2 53,786,931 53,834,524 RGD:2290271
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha JBrowse link 14 52,639,915 52,695,750 RGD:2290271
G ERP27 endoplasmic reticulum protein 27 JBrowse link 12 14,914,027 14,938,537 RGD:2290271
G ERP29 endoplasmic reticulum protein 29 JBrowse link 12 112,013,340 112,023,449 RGD:2290271
G ERP44 endoplasmic reticulum protein 44 JBrowse link 9 99,979,185 100,099,000 RGD:2290271
G ESD esterase D JBrowse link 13 46,771,256 46,797,700 RGD:2290271
G EVA1A eva-1 homolog A, regulator of programmed cell death JBrowse link 2 75,492,318 75,569,719 RGD:2290271
G F10 coagulation factor X JBrowse link 13 113,122,799 113,149,529 RGD:2290271
G F2 coagulation factor II, thrombin JBrowse link 11 46,719,201 46,739,506 RGD:2290271
G F5 coagulation factor V JBrowse link 1 169,511,951 169,586,630 RGD:2290271
G F7 coagulation factor VII JBrowse link 13 113,105,773 113,120,685 RGD:2290271
G F8 coagulation factor VIII JBrowse link X 154,835,788 155,022,723 RGD:2290271
G F9 coagulation factor IX JBrowse link X 139,530,720 139,563,459 RGD:2290271
G FAM20C FAM20C golgi associated secretory pathway kinase JBrowse link 7 192,571 260,772 RGD:2290271
G FBN1 fibrillin 1 JBrowse link 15 48,408,313 48,645,709 RGD:2290271
G FGA fibrinogen alpha chain JBrowse link 4 154,583,126 154,590,742 RGD:2290271
G FGF23 fibroblast growth factor 23 JBrowse link 12 4,368,227 4,379,712 RGD:2290271
G FGG fibrinogen gamma chain JBrowse link 4 154,604,134 154,612,808 RGD:2290271
G FKBP10 FKBP prolyl isomerase 10 JBrowse link 17 41,812,938 41,823,215 RGD:2290271
G FKBP14 FKBP prolyl isomerase 14 JBrowse link 7 30,010,587 30,026,702 RGD:2290271
G FKBP7 FKBP prolyl isomerase 7 JBrowse link 2 178,463,664 178,480,817 RGD:2290271
G FLT3 fms related receptor tyrosine kinase 3 JBrowse link 13 28,003,274 28,100,587 RGD:2290271
G FMO1 flavin containing dimethylaniline monoxygenase 1 JBrowse link 1 171,248,471 171,285,978 RGD:2290271
G FN1 fibronectin 1 JBrowse link 2 215,360,440 215,436,167 RGD:2290271
G FOXRED2 FAD dependent oxidoreductase domain containing 2 JBrowse link 22 36,487,190 36,507,040 RGD:2290271
G FSTL1 follistatin like 1 JBrowse link 3 120,392,293 120,450,993 RGD:2290271
G FSTL3 follistatin like 3 JBrowse link 19 676,392 683,385 RGD:2290271
G FUCA2 alpha-L-fucosidase 2 JBrowse link 6 143,494,812 143,511,720 RGD:2290271
G GANAB glucosidase II alpha subunit JBrowse link 11 62,624,826 62,646,726 RGD:2290271
G GAS6 growth arrest specific 6 JBrowse link 13 113,820,549 113,864,076 RGD:2290271
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 10 102,245,531 102,382,899 RGD:2290271
G GCG glucagon JBrowse link 2 162,142,882 162,152,247 RGD:2290271
G GHRL ghrelin and obestatin prepropeptide JBrowse link 3 10,285,666 10,292,947 RGD:2290271
G GIP gastric inhibitory polypeptide JBrowse link 17 48,958,554 48,968,596 RGD:2290271
G GOLM1 golgi membrane protein 1 JBrowse link 9 86,026,141 86,100,201 RGD:2290271
G GPC3 glypican 3 JBrowse link X 133,535,745 133,985,616 RGD:2290271
G GPX7 glutathione peroxidase 7 JBrowse link 1 52,602,371 52,609,051 RGD:2290271
G GPX8 glutathione peroxidase 8 (putative) JBrowse link 5 55,160,155 55,167,297 RGD:2290271
G H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase JBrowse link 1 9,234,767 9,271,337 RGD:2290271
G HRC histidine rich calcium binding protein JBrowse link 19 49,151,198 49,155,464 RGD:2290271
G HSP90B1 heat shock protein 90 beta family member 1 JBrowse link 12 103,930,410 103,947,926 RGD:2290271
G HSPA5 heat shock protein family A (Hsp70) member 5 JBrowse link 9 125,234,853 125,241,343 RGD:2290271
G HYOU1 hypoxia up-regulated 1 JBrowse link 11 119,044,187 119,057,205 RGD:2290271
G IGFBP1 insulin like growth factor binding protein 1 JBrowse link 7 45,888,488 45,893,660 RGD:2290271
G IGFBP3 insulin like growth factor binding protein 3 JBrowse link 7 45,912,245 45,921,272 RGD:2290271
G IGFBP4 insulin like growth factor binding protein 4 JBrowse link 17 40,443,450 40,457,725 RGD:2290271
G IGFBP5 insulin like growth factor binding protein 5 JBrowse link 2 216,672,105 216,695,549 RGD:2290271
G IGFBP7 insulin like growth factor binding protein 7 JBrowse link 4 57,030,773 57,110,385 RGD:2290271
G IL12A interleukin 12A JBrowse link 3 159,988,835 159,996,019 RGD:2290271
G IL12B interleukin 12B JBrowse link 5 159,314,780 159,330,487 RGD:2290271
G IL23A interleukin 23 subunit alpha JBrowse link 12 56,334,159 56,340,410 RGD:2290271
G IL27 interleukin 27 JBrowse link 16 28,499,362 28,526,730 RGD:2290271
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:2290271
G INS insulin JBrowse link 11 2,159,779 2,161,209 RGD:2290271
G ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 JBrowse link 10 7,703,316 7,749,520 RGD:2290271
G JMJD8 jumonji domain containing 8 JBrowse link 16 681,670 684,334 RGD:2290271
G KNG1 kininogen 1 JBrowse link 3 186,717,359 186,744,410 RGD:2290271
G KTN1 kinectin 1 JBrowse link 14 55,580,207 55,684,584 RGD:2290271
G LAMB1 laminin subunit beta 1 JBrowse link 7 107,923,799 108,003,176 RGD:2290271
G LAMB2 laminin subunit beta 2 JBrowse link 3 49,121,114 49,133,066 RGD:2290271
G LAMC1 laminin subunit gamma 1 JBrowse link 1 183,023,420 183,145,592 RGD:2290271
G LGALS1 galectin 1 JBrowse link 22 37,675,636 37,679,802 RGD:2290271
G LIPC lipase C, hepatic type JBrowse link 15 58,410,457 58,569,844 RGD:2290271
G LTBP1 latent transforming growth factor beta binding protein 1 JBrowse link 2 32,902,129 33,399,509 RGD:2290271
G MANF mesencephalic astrocyte derived neurotrophic factor JBrowse link 3 51,385,291 51,389,397 RGD:2290271
G MATN3 matrilin 3 JBrowse link 2 19,992,052 20,012,668 RGD:2290271
G MBTPS1 membrane bound transcription factor peptidase, site 1 JBrowse link 16 84,053,763 84,116,942 RGD:2290271
G MELTF melanotransferrin JBrowse link 3 197,001,740 197,029,817 RGD:2290271
G MEN1 menin 1 JBrowse link 11 64,803,514 64,811,294 RGD:2290271
G MEPE matrix extracellular phosphoglycoprotein JBrowse link 4 87,821,398 87,846,817 RGD:2290271
G MFGE8 milk fat globule EGF and factor V/VIII domain containing JBrowse link 15 88,898,683 88,913,405 RGD:2290271
G MGAT4A alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A JBrowse link 2 98,619,106 98,731,132 RGD:2290271
G MIA3 MIA SH3 domain ER export factor 3 JBrowse link 1 222,618,097 222,668,012 RGD:2290271
G MINPP1 multiple inositol-polyphosphate phosphatase 1 JBrowse link 10 87,504,466 87,553,461 RGD:2290271
G MSLN mesothelin JBrowse link 16 760,734 768,865 RGD:2290271
G MTTP microsomal triglyceride transfer protein JBrowse link 4 99,564,078 99,623,997 RGD:2290271
G MXRA8 matrix remodeling associated 8 JBrowse link 1 1,352,689 1,363,541 RGD:2290271
G MYDGF myeloid derived growth factor JBrowse link 19 4,657,545 4,670,391 RGD:2290271
G MZB1 marginal zone B and B1 cell specific protein JBrowse link 5 139,387,467 139,389,913 RGD:2290271
G NOTUM notum, palmitoleoyl-protein carboxylesterase JBrowse link 17 81,952,507 81,961,187 RGD:2290271
G NUCB1 nucleobindin 1 JBrowse link 19 48,900,312 48,923,372 RGD:2290271
G OS9 OS9 endoplasmic reticulum lectin JBrowse link 12 57,693,955 57,721,557 RGD:2290271
G P3H1 prolyl 3-hydroxylase 1 JBrowse link 1 42,746,335 42,767,084 RGD:2290271
G P3H2 prolyl 3-hydroxylase 2 JBrowse link 3 189,956,728 190,122,437 RGD:2290271
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 JBrowse link 10 73,007,217 73,096,974 RGD:2290271
G P4HA2 prolyl 4-hydroxylase subunit alpha 2 JBrowse link 5 132,190,147 132,227,853 RGD:2290271
G P4HA3 prolyl 4-hydroxylase subunit alpha 3 JBrowse link 11 74,259,923 74,311,654 RGD:2290271
G P4HB prolyl 4-hydroxylase subunit beta JBrowse link 17 81,843,159 81,860,535 RGD:2290271
G PCSK9 proprotein convertase subtilisin/kexin type 9 JBrowse link 1 55,039,548 55,064,853 RGD:2290271
G PDGFA platelet derived growth factor subunit A JBrowse link 7 497,245 520,668 RGD:2290271
G PDGFB platelet derived growth factor subunit B JBrowse link 22 39,223,359 39,244,982 RGD:2290271
G PDGFC platelet derived growth factor C JBrowse link 4 156,760,454 156,971,799 RGD:2290271
G PDGFD platelet derived growth factor D JBrowse link 11 103,907,189 104,164,147 RGD:2290271
G PDIA2 protein disulfide isomerase family A member 2 JBrowse link 16 283,164 287,215 RGD:2290271
G PDIA3 protein disulfide isomerase family A member 3 JBrowse link 15 43,746,438 43,773,278 RGD:2290271
G PDIA4 protein disulfide isomerase family A member 4 JBrowse link 7 149,003,051 149,028,505 RGD:2290271
G PDIA5 protein disulfide isomerase family A member 5 JBrowse link 3 123,067,025 123,162,104 RGD:2290271
G PDIA6 protein disulfide isomerase family A member 6 JBrowse link 2 10,783,391 10,837,712 RGD:2290271
G PENK proenkephalin JBrowse link 8 56,440,957 56,446,641 RGD:2290271
G PLAUR plasminogen activator, urokinase receptor JBrowse link 19 43,646,095 43,670,346 RGD:2290271
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 JBrowse link 7 101,205,984 101,217,581 RGD:2290271
G PNPLA2 patatin like phospholipase domain containing 2 JBrowse link 11 818,890 825,573 RGD:2290271
G POGLUT1 protein O-glucosyltransferase 1 JBrowse link 3 119,468,955 119,494,708 RGD:2290271
G POGLUT2 protein O-glucosyltransferase 2 JBrowse link 13 102,784,281 102,799,009 RGD:2290271
G POGLUT3 protein O-glucosyltransferase 3 JBrowse link 11 108,472,116 108,498,384 RGD:2290271
G PPIB peptidylprolyl isomerase B JBrowse link 15 64,155,817 64,163,022 RGD:2290271
G PRKCSH protein kinase C substrate 80K-H JBrowse link 19 11,435,257 11,450,968 RGD:2290271
G PROC protein C, inactivator of coagulation factors Va and VIIIa JBrowse link 2 127,418,143 127,429,246 RGD:2290271
G PROZ protein Z, vitamin K dependent plasma glycoprotein JBrowse link 13 113,155,864 113,172,386 RGD:2290271
G PRSS23 serine protease 23 JBrowse link 11 86,791,071 86,952,910 RGD:2290271
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:2290271
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 157,539,052 158,587,823 RGD:2290271
G QSOX1 quiescin sulfhydryl oxidase 1 JBrowse link 1 180,154,833 180,204,030 RGD:2290271
G RCN1 reticulocalbin 1 JBrowse link 11 32,091,074 32,105,722 RGD:2290271
G RCN2 reticulocalbin 2 JBrowse link 15 76,931,749 76,954,393 RGD:2290271
G RCN3 reticulocalbin 3 JBrowse link 19 49,527,579 49,543,638 RGD:2290271
G RDH5 retinol dehydrogenase 5 JBrowse link 12 55,720,393 55,724,742 RGD:2290271
G RNASET2 ribonuclease T2 JBrowse link 6 166,922,113 166,956,580 RGD:2290271
G SCG2 secretogranin II JBrowse link 2 223,596,940 223,602,361 RGD:2290271
G SCG3 secretogranin III JBrowse link 15 51,681,353 51,721,026 RGD:2290271
G SDC2 syndecan 2 JBrowse link 8 96,493,601 96,611,790 RGD:2290271
G SDF2L1 stromal cell derived factor 2 like 1 JBrowse link 22 21,642,302 21,644,299 RGD:2290271
G SELENOF selenoprotein F JBrowse link 1 86,862,445 86,914,577 RGD:2290271
G SELENOM selenoprotein M JBrowse link 22 31,104,777 31,107,568 RGD:2290271
G SERPINA1 serpin family A member 1 JBrowse link 14 94,376,747 94,390,654 RGD:2290271
G SERPINA10 serpin family A member 10 JBrowse link 14 94,280,460 94,293,353 RGD:2290271
G SERPINC1 serpin family C member 1 JBrowse link 1 173,903,519 173,917,378 RGD:2290271
G SERPIND1 serpin family D member 1 JBrowse link 22 20,774,113 20,787,720 RGD:2290271
G SERPINH1 serpin family H member 1 JBrowse link 11 75,562,253 75,572,811 RGD:2290271
G SHH sonic hedgehog signaling molecule JBrowse link 7 155,799,980 155,812,463 RGD:2290271
G SHISA5 shisa family member 5 JBrowse link 3 48,467,798 48,504,826 RGD:2290271
G SIL1 SIL1 nucleotide exchange factor JBrowse link 5 138,946,724 139,198,368 RGD:2290271
G SLC27A2 solute carrier family 27 member 2 JBrowse link 15 50,182,196 50,236,392 RGD:2290271
G SPARCL1 SPARC like 1 JBrowse link 4 87,473,330 87,529,503 RGD:2290271
G SPON1 spondin 1 JBrowse link 11 13,962,723 14,268,133 RGD:2290271
G SPP1 secreted phosphoprotein 1 JBrowse link 4 87,975,650 87,983,411 RGD:2290271
G SPP2 secreted phosphoprotein 2 JBrowse link 2 234,050,667 234,077,134 RGD:2290271
G STC2 stanniocalcin 2 JBrowse link 5 173,314,723 173,329,503 RGD:2290271
G STS steroid sulfatase JBrowse link X 7,147,290 7,354,641 RGD:2290271
G SUMF1 sulfatase modifying factor 1 JBrowse link 3 4,034,714 4,467,282 RGD:2290271
G SUMF2 sulfatase modifying factor 2 JBrowse link 7 56,064,007 56,080,672 RGD:2290271
G TF transferrin JBrowse link 3 133,661,998 133,796,641 RGD:2290271
G TGOLN2 trans-golgi network protein 2 JBrowse link 2 85,318,027 85,327,989 RGD:2290271
G THBS1 thrombospondin 1 JBrowse link 15 39,581,079 39,599,466 RGD:2290271
G TIMP1 TIMP metallopeptidase inhibitor 1 JBrowse link X 47,582,408 47,586,789 RGD:2290271
G TMEM132A transmembrane protein 132A JBrowse link 11 60,924,460 60,937,159 RGD:2290271
G TNC tenascin C JBrowse link 9 115,019,575 115,118,244 RGD:2290271
G TOR1A torsin family 1 member A JBrowse link 9 129,812,942 129,824,136 RGD:2290271
G TOR1B torsin family 1 member B JBrowse link 9 129,803,143 129,811,424 RGD:2290271
G TOR2A torsin family 2 member A JBrowse link 9 127,731,524 127,735,328 RGD:2290271
G TOR3A torsin family 3 member A JBrowse link 1 179,082,070 179,095,996 RGD:2290271
G TOR4A torsin family 4 member A JBrowse link 9 137,277,726 137,282,641 RGD:2290271
G TSPAN14 tetraspanin 14 JBrowse link 10 80,454,265 80,533,124 RGD:2290271
G TSPAN15 tetraspanin 15 JBrowse link 10 69,451,464 69,549,508 RGD:2290271
G TSPAN33 tetraspanin 33 JBrowse link 7 129,144,707 129,169,699 RGD:2290271
G TSPAN5 tetraspanin 5 JBrowse link 4 98,470,367 98,658,661 RGD:2290271
G TXNDC12 thioredoxin domain containing 12 JBrowse link 1 52,020,131 52,056,171 RGD:2290271
G TXNDC16 thioredoxin domain containing 16 JBrowse link 14 52,430,590 52,552,583 RGD:2290271
G TXNDC5 thioredoxin domain containing 5 JBrowse link 6 7,881,514 7,910,788 RGD:2290271
G UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 JBrowse link 2 128,091,184 128,195,677 RGD:2290271
G UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 JBrowse link 13 95,801,580 96,053,437 RGD:2290271
G VCAN versican JBrowse link 5 83,471,674 83,582,303 RGD:2290271
G VCPIP1 valosin containing protein interacting protein 1 JBrowse link 8 66,628,487 66,667,231 RGD:2290271
G VGF VGF nerve growth factor inducible JBrowse link 7 101,162,509 101,169,956 RGD:2290271
G VWA1 von Willebrand factor A domain containing 1 JBrowse link 1 1,435,690 1,442,882 RGD:2290271
G WFS1 wolframin ER transmembrane glycoprotein JBrowse link 4 6,260,368 6,303,265 RGD:2290271
G WNT1 Wnt family member 1 JBrowse link 12 48,978,322 48,982,620 RGD:2290271
G WNT3 Wnt family member 3 JBrowse link 17 46,762,506 46,818,692 RGD:2290271
G WNT3A Wnt family member 3A JBrowse link 1 228,006,998 228,067,113 RGD:2290271
G WNT4 Wnt family member 4 JBrowse link 1 22,117,308 22,143,981 RGD:2290271
G WNT5A Wnt family member 5A JBrowse link 3 55,465,715 55,505,261 RGD:2290271
G WNT5B Wnt family member 5B JBrowse link 12 1,529,856 1,647,213 RGD:2290271
G WNT6 Wnt family member 6 JBrowse link 2 218,859,805 218,874,233 RGD:2290271
G WNT7A Wnt family member 7A JBrowse link 3 13,816,258 13,880,071 RGD:2290271
G WNT7B Wnt family member 7B JBrowse link 22 45,920,362 45,977,162 RGD:2290271
perinuclear endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CLU clusterin JBrowse link 8 27,596,917 27,615,031 RGD:2290271
rough endoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EDN1 endothelin 1 JBrowse link 6 12,256,463 12,297,194 RGD:2290271
G LRPAP1 LDL receptor related protein associated protein 1 JBrowse link 4 3,503,597 3,532,497 RGD:2290271
G VTN vitronectin JBrowse link 17 28,367,284 28,370,307 RGD:2290271
sarcoplasmic reticulum lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASPH aspartate beta-hydroxylase JBrowse link 8 61,500,556 61,714,640 RGD:2290271
G CALR calreticulin JBrowse link 19 12,938,609 12,944,489 RGD:2290271
G CALU calumenin JBrowse link 7 128,739,359 128,773,400 RGD:2290271
G CASQ1 calsequestrin 1 JBrowse link 1 160,190,575 160,201,886 RGD:2290271
G CASQ2 calsequestrin 2 JBrowse link 1 115,700,003 115,768,805 RGD:2290271
G HRC histidine rich calcium binding protein JBrowse link 19 49,151,198 49,155,464 RGD:2290271
G HSP90B1 heat shock protein 90 beta family member 1 JBrowse link 12 103,930,410 103,947,926 RGD:2290271
G MANF mesencephalic astrocyte derived neurotrophic factor JBrowse link 3 51,385,291 51,389,397 RGD:2290271
G SRL sarcalumenin JBrowse link 16 4,189,374 4,242,253 RGD:2290271
G TRDN triadin JBrowse link 6 123,216,339 123,637,093 RGD:2290271
terminal cisterna lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CASQ1 calsequestrin 1 JBrowse link 1 160,190,575 160,201,886 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19009
    intracellular 14644
      cytoplasm 11581
        endoplasmic reticulum 1451
          endoplasmic reticulum lumen 309
            cortical endoplasmic reticulum lumen 0
            luminal surveillance complex 0
            mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
            perinuclear endoplasmic reticulum lumen 1
            rough endoplasmic reticulum lumen 3
            sarcoplasmic reticulum lumen + 10
            smooth endoplasmic reticulum lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 19009
    cellular anatomical entity 18812
      organelle 13891
        intracellular organelle 12846
          intracellular membrane-bounded organelle 11049
            endoplasmic reticulum 1451
              endoplasmic reticulum lumen 309
                cortical endoplasmic reticulum lumen 0
                luminal surveillance complex 0
                mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
                perinuclear endoplasmic reticulum lumen 1
                rough endoplasmic reticulum lumen 3
                sarcoplasmic reticulum lumen + 10
                smooth endoplasmic reticulum lumen 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.