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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of glycogen biosynthetic process
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Accession:GO:0005979 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.
Synonyms:exact_synonym: regulation of glycogen anabolism;   regulation of glycogen biosynthesis;   regulation of glycogen formation;   regulation of glycogen synthesis


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regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:8940145) BHF-UCL PMID:8940145 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO (MGI:MGI:5294535|PMID:19250614) UniProtKB PMID:19250614 MGI:MGI:5294535 NCBI chrNW_004936538:7,641,485...7,662,033 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B ISO RGD PMID:7720853, PMID:11716774 RGD:2304267, RGD:2306167 NCBI chrNW_004936573:1,351,207...1,363,639 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936514:8,350,275...8,353,782 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link
G Ppp1r3f protein phosphatase 1 regulatory subunit 3F ISO (PMID:21668450) MGI PMID:21668450 NCBI chrNW_004936721:1,137,998...1,153,243 JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chrNW_004936491:13,603,256...13,665,298 JBrowse link
G Grb10 growth factor receptor bound protein 10 ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chrNW_004936686:1,102,706...1,279,594 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO (MGI:MGI:5294535|PMID:19250614)
(PMID:12556481)
UniProtKB PMID:12556481, PMID:19250614 MGI:MGI:5294535 NCBI chrNW_004936538:7,641,485...7,662,033 JBrowse link
G Insr insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G LOC101964456 ectonucleotide pyrophosphatase/phosphodiesterase family member 1 ISO (PMID:11289049) BHF-UCL PMID:11289049 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Pask PAS domain containing serine/threonine kinase ISO (PMID:16275910) UniProtKB PMID:16275910 NCBI chrNW_004936745:664,062...704,027 JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936661:2,652,568...2,694,039 JBrowse link
G C1qtnf2 C1q and TNF related 2 ISO (MGI:MGI:3055459|PMID:15231994) MGI PMID:15231994 MGI:MGI:3055459 NCBI chrNW_004936515:3,208,042...3,227,970 JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ISO (PMID:11311121) UniProtKB PMID:11311121 NCBI chrNW_004936545:5,542,873...5,555,469 JBrowse link
G Epm2aip1 EPM2A interacting protein 1 ISO (MGI:MGI:5543825|PMID:24142699) MGI PMID:24142699 MGI:MGI:5543825 NCBI chrNW_004936473:26,548,847...26,556,334 JBrowse link
G Esrrb estrogen related receptor beta ISO (MGI:MGI:5905261|PMID:24481529) BHF-UCL PMID:24481529 MGI:MGI:5905261, RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366 JBrowse link
G Gck glucokinase ISO (PMID:8878425) UniProtKB PMID:8878425 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Igf1 insulin like growth factor 1 ISO (PMID:21076856) UniProtKB PMID:21076856 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Igf2 insulin like growth factor 2 ISO (MGI:MGI:4438697|PMID:20032056) BHF-UCL PMID:20032056 MGI:MGI:4438697 NCBI chrNW_004936816:972,902...981,232 JBrowse link
G Ins insulin ISO (PMID:17925406) BHF-UCL PMID:17925406 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Insr insulin receptor ISO (PMID:17925406)
(MGI:MGI:4438697|PMID:20032056)
BHF-UCL PMID:17925406, PMID:20032056 MGI:MGI:4438697 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Irs1 insulin receptor substrate 1 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936525:9,064,442...9,125,972 JBrowse link
G Irs2 insulin receptor substrate 2 ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936472:2,772,187...2,796,398 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link
G Ppp1r3g protein phosphatase 1 regulatory subunit 3G ISO (MGI:MGI:5000151|PMID:21471512) MGI PMID:21471512 MGI:MGI:5000151 NCBI chrNW_004936534:7,379,443...7,382,752 JBrowse link
G Pth parathyroid hormone ISO (PMID:21076856) UniProtKB PMID:21076856 NCBI chrNW_004936528:5,081,569...5,084,030 JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 ISO (MGI:MGI:3690172|PMID:11001060) BHF-UCL PMID:11001060 MGI:MGI:3690172 NCBI chrNW_004936636:3,834,887...4,066,293 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11966
    metabolic process 7654
      regulation of metabolic process 5090
        regulation of cellular metabolic process 4556
          regulation of cellular carbohydrate metabolic process 152
            regulation of glucan biosynthetic process 29
              regulation of glycogen biosynthetic process 29
                negative regulation of glycogen biosynthetic process 6
                positive regulation of glycogen biosynthetic process 17
Path 2
Term Annotations click to browse term
  biological_process 11966
    metabolic process 7654
      organic substance metabolic process 7354
        carbohydrate metabolic process 382
          carbohydrate biosynthetic process 166
            cellular carbohydrate biosynthetic process 63
              cellular polysaccharide biosynthetic process 57
                glucan biosynthetic process 42
                  regulation of glucan biosynthetic process 29
                    regulation of glycogen biosynthetic process 29
                      negative regulation of glycogen biosynthetic process 6
                      positive regulation of glycogen biosynthetic process 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.