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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 1:113,935,888...113,965,541
Ensembl chr 1:126,381,724...126,391,909
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997)
(PMID:19435888)
RGD
UniProt
UniProtKB
PMID:11085997, PMID:19435888 MGI:1931335, RGD:5000759 NCBI chr 1:113,935,888...113,965,541
Ensembl chr 1:126,381,724...126,391,909
JBrowse link
G CHIT1 chitinase 1 ISO (PMID:19725875) UniProtKB PMID:19725875 NCBI chr 1:178,816,396...178,875,895 JBrowse link
G CTBS chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chr 1:117,102,555...117,169,745
Ensembl chr 1:85,962,647...85,982,907
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN3K fructosamine 3 kinase ISO (MGI:1889989|PMID:11016445) MGI PMID:11016445 MGI:1889989 NCBI chr17:77,154,014...77,169,903
Ensembl chr17:82,950,967...82,966,161
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPDA1 glucosamine-6-phosphate deaminase 1 ISO (PMID:9438414) UniProtKB PMID:9438414 NCBI chr 5:137,362,575...137,375,079
Ensembl chr 5:143,464,056...143,484,857
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr14:33,371,603...33,388,098
Ensembl chr14:51,655,182...51,671,619
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST2 carbohydrate sulfotransferase 2 ISO (PMID:9722682) UniProtKB PMID:9722682 NCBI chr 3:140,149,509...140,153,162 JBrowse link
G CHST4 carbohydrate sulfotransferase 4 ISO (PMID:10330415) UniProtKB PMID:10330415 NCBI chr16:53,472,432...53,485,605
Ensembl chr16:71,373,703...71,374,863
JBrowse link
G CHST5 carbohydrate sulfotransferase 5 ISO (PMID:10491328), (PMID:12218059) UniProtKB PMID:10491328, PMID:12218059 NCBI chr16:56,097,770...56,105,546
Ensembl chr16:75,446,349...75,447,584
JBrowse link
G CHST6 carbohydrate sulfotransferase 6 ISO (PMID:11352640)
(MGI:1934540|PMID:11278593), (MGI:3687902|PMID:12218059)
UniProtKB
UniProt
PMID:11278593, PMID:11352640, PMID:12218059 MGI:1934540, MGI:3687902 NCBI chr16:56,041,518...56,062,463
Ensembl chr16:75,394,187...75,395,374
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 ISO (PMID:10913333) UniProtKB PMID:10913333 NCBI chr  X:39,012,011...39,036,655
Ensembl chr  X:46,873,942...46,875,436
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chr 1:103,528,962...103,552,575
Ensembl chr 1:102,242,291...102,265,898
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr14:33,371,603...33,388,098
Ensembl chr14:51,655,182...51,671,619
JBrowse link
G HEXB hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:5613435|PMID:24619415) MGI PMID:24619415 MGI:5613435 NCBI chr22:20,363,244...20,398,471
Ensembl chr22:38,214,029...38,215,630
JBrowse link
G NAGK N-acetylglucosamine kinase ISO (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chr2A:71,114,832...71,125,182
Ensembl chr2A:72,616,077...72,626,435
JBrowse link
G OGA O-GlcNAcase ISO (PMID:11148210) UniProtKB
RGD
PMID:11148210, PMID:19139380 RGD:2305938 NCBI chr10:98,387,144...98,421,105
Ensembl chr10:101,858,879...101,892,479
JBrowse link
G RENBP renin binding protein ISO (MGI:1858659|PMID:10809771) RGD
MGI
PMID:10809771, PMID:11726282 MGI:1858659, RGD:5132613 NCBI chr  X:143,490,103...143,499,487
Ensembl chr  X:153,376,847...153,386,214
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RENBP renin binding protein ISO RGD PMID:11726282 RGD:5132613 NCBI chr  X:143,490,103...143,499,487
Ensembl chr  X:153,376,847...153,386,214
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANP N-acetylneuraminic acid phosphatase ISO (PMID:16237198) UniProtKB
UniProt
PMID:16237198 RGD:8554804 NCBI chr20:25,566,464...25,576,960
Ensembl chr20:25,970,274...25,981,685
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) UniProt PMID:19820709 NCBI chr 8:130,111,085...130,227,195
Ensembl chr 8:133,084,835...133,119,791
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ISO (PMID:23999306) UniProtKB PMID:23999306 NCBI chr 3:183,955,462...184,104,537
Ensembl chr 3:192,488,087...192,569,970
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (PMID:12678917), (PMID:14688233) UniProtKB PMID:12678917, PMID:14688233 NCBI chr17:8,432,636...8,460,533
Ensembl chr17:8,414,549...8,442,036
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (PMID:11514575) UniProtKB PMID:11514575 NCBI chr 8:18,626,998...18,980,416
Ensembl chr 8:15,576,416...15,904,123
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chr 1:103,528,962...103,552,575
Ensembl chr 1:102,242,291...102,265,898
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGM3 phosphoglucomutase 3 ISO (PMID:24589341)
(MGI:3723540|PMID:17548465)
UniProtKB
MGI
PMID:17548465, PMID:24589341 MGI:3723540 NCBI chr 6:81,062,356...81,090,215
Ensembl chr 6:84,336,092...84,364,515
JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:51667 NCBI chr 5:175,978,425...176,003,620
Ensembl chr 5:183,293,237...183,294,574
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (MGI:65525|PMID:8137279)
(MGI:56455|PMID:4031755)
MGI PMID:4031755, PMID:8137279 MGI:56455, MGI:65525 NCBI chr17:8,432,636...8,460,533
Ensembl chr17:8,414,549...8,442,036
JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chr11:113,934,705...113,940,535
Ensembl chr11:117,863,866...117,870,204
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chr 1:137,978,615...138,016,098
Ensembl chr 1:141,775,920...141,812,852
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    metabolic process 7977
      organic substance metabolic process 7668
        carbohydrate derivative metabolic process 723
          amino sugar metabolic process 28
            N-acetylneuraminate metabolic process + 3
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 3
            UDP-N-acetylglucosamine metabolic process + 6
            amino sugar biosynthetic process + 3
            amino sugar catabolic process + 5
            fructosamine metabolic process + 1
            glucosamine-containing compound metabolic process + 18
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.