Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
go back to main search page
Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


GViewer not supported for chinchilla.
show annotations for term's descendants           Sort by:
 
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chit1 chitinase 1 ISO (PMID:19725875) UniProtKB PMID:19725875 NCBI chrNW_004955406:39,229,161...39,253,328
Ensembl chrNW_004955406:39,229,356...39,241,540
JBrowse link
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004955423:9,327,945...9,343,923
Ensembl chrNW_004955423:9,327,945...9,343,923
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn3k fructosamine 3 kinase ISO (MGI:1889989|PMID:11016445) MGI PMID:11016445 MGI:1889989 NCBI chrNW_004955506:434,613...451,063
Ensembl chrNW_004955506:434,613...448,894
JBrowse link
G Mdp1 magnesium dependent phosphatase 1 ISO RGD PMID:16670083 RGD:2326017 NCBI chrNW_004955409:36,183,114...36,185,184
Ensembl chrNW_004955409:36,183,119...36,185,178
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chrNW_004955424:15,692,088...15,739,894
Ensembl chrNW_004955424:15,692,088...15,739,894
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO (PMID:9438414) UniProtKB PMID:9438414 NCBI chrNW_004955415:11,770,111...11,783,430
Ensembl chrNW_004955415:11,770,063...11,784,188
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chrNW_004955409:10,406,248...10,424,431
Ensembl chrNW_004955409:10,406,723...10,424,431
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst2 carbohydrate sulfotransferase 2 ISO (PMID:9722682) UniProtKB PMID:9722682 NCBI chrNW_004955508:2,821,724...2,824,926
Ensembl chrNW_004955508:2,823,399...2,824,925
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 ISO (PMID:10330415) UniProtKB PMID:10330415 NCBI chrNW_004955484:4,234,677...4,245,092
Ensembl chrNW_004955484:4,243,148...4,244,293
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO (PMID:10913333) UniProtKB PMID:10913333 NCBI chrNW_004955516:1,435,972...1,466,249
Ensembl chrNW_004955516:1,461,789...1,466,249
JBrowse link
G Extl2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chrNW_004955435:5,509,648...5,527,751
Ensembl chrNW_004955435:5,509,648...5,531,458
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chrNW_004955409:10,406,248...10,424,431
Ensembl chrNW_004955409:10,406,723...10,424,431
JBrowse link
G Hexb hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:5613435|PMID:24619415) MGI PMID:24619415 MGI:5613435 NCBI chrNW_004955413:25,346,135...25,367,782
Ensembl chrNW_004955413:25,360,806...25,367,782
JBrowse link
G Nagk N-acetylglucosamine kinase ISO (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chrNW_004955424:14,205,689...14,215,201
Ensembl chrNW_004955424:14,205,813...14,215,156
JBrowse link
G Oga O-GlcNAcase ISO (PMID:11148210) UniProtKB
RGD
PMID:11148210, PMID:19139380 RGD:2305938 NCBI chrNW_004955485:8,477,615...8,509,386
Ensembl chrNW_004955485:8,478,060...8,507,420
JBrowse link
G Renbp renin binding protein ISO (MGI:1858659|PMID:10809771) RGD
MGI
PMID:10809771, PMID:11726282 MGI:1858659, RGD:5132613 NCBI chrNW_004955580:610,112...615,019
Ensembl chrNW_004955580:609,964...615,027
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Renbp renin binding protein ISO RGD PMID:11726282 RGD:5132613 NCBI chrNW_004955580:610,112...615,019
Ensembl chrNW_004955580:609,964...615,027
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanp N-acetylneuraminic acid phosphatase ISO PMID:16237198
(PMID:16237198)
UniProt
UniProtKB
PMID:16237198 RGD:8554804 NCBI chrNW_004955415:31,453,393...31,460,147
Ensembl chrNW_004955415:31,453,393...31,460,386
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) UniProt PMID:19820709 NCBI chrNW_004955461:7,960,901...8,036,221
Ensembl chrNW_004955461:7,960,690...7,976,183
JBrowse link
G St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ISO (PMID:23999306) UniProtKB PMID:23999306 NCBI chrNW_004955420:20,708,890...20,801,167
Ensembl chrNW_004955420:20,709,301...20,801,167
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (PMID:12678917), (PMID:14688233) UniProtKB PMID:12678917, PMID:14688233 NCBI chrNW_004955451:12,260,885...12,281,301
Ensembl chrNW_004955451:12,259,949...12,279,815
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (PMID:11514575) UniProtKB PMID:11514575 NCBI chrNW_004955403:43,178,520...43,347,121
Ensembl chrNW_004955403:43,178,520...43,478,885
JBrowse link
G Extl2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chrNW_004955435:5,509,648...5,527,751
Ensembl chrNW_004955435:5,509,648...5,531,458
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgm3 phosphoglucomutase 3 ISO (PMID:24589341)
(MGI:3723540|PMID:17548465)
UniProtKB
MGI
PMID:17548465, PMID:24589341 MGI:3723540 NCBI chrNW_004955411:10,904,022...10,925,613
Ensembl chrNW_004955411:10,904,022...10,924,216
JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:51667 NCBI chrNW_004955530:436,518...452,296
Ensembl chrNW_004955530:437,008...452,289
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (MGI:65525|PMID:8137279)
(MGI:56455|PMID:4031755)
MGI PMID:4031755, PMID:8137279 MGI:56455, MGI:65525 NCBI chrNW_004955451:12,260,885...12,281,301
Ensembl chrNW_004955451:12,259,949...12,279,815
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chrNW_004955412:20,205,381...20,217,874
Ensembl chrNW_004955412:20,205,381...20,217,871
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chrNW_004955424:15,692,088...15,739,894
Ensembl chrNW_004955424:15,692,088...15,739,894
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chrNW_004955462:13,765,197...13,799,937
Ensembl chrNW_004955462:13,760,693...13,800,417
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    metabolic process 7608
      organic substance metabolic process 7317
        carbohydrate derivative metabolic process 698
          amino sugar metabolic process 26
            N-acetylneuraminate metabolic process + 3
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 3
            UDP-N-acetylglucosamine metabolic process + 6
            amino sugar biosynthetic process + 3
            amino sugar catabolic process + 4
            fructosamine metabolic process + 2
            glucosamine-containing compound metabolic process + 15
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.