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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 6:40,754,906...40,766,779
Ensembl chr 6:40,754,993...40,766,891
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:25,620...32,954
Ensembl chr 7:26,316...33,427
JBrowse link
G CHIA chitinase acidic IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:40,754,906...40,766,779
Ensembl chr 6:40,754,993...40,766,891
JBrowse link
G CTBS chitobiase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,308,013...63,342,697
Ensembl chr 6:63,308,420...63,342,266
JBrowse link
G OVGP1 oviductal glycoprotein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:63,955,766...63,985,878
Ensembl chr17:63,957,251...63,983,421
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN3K fructosamine 3 kinase ISO (MGI:1889989|PMID:11016445) MGI PMID:11016445 MGI:1889989
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:36,938,682...36,949,657
Ensembl chr 2:36,939,750...36,948,966
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:41,207,192...41,228,573
Ensembl chr13:41,207,897...41,232,404
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr 8:28,992,173...29,005,511
Ensembl chr 8:28,993,227...29,005,435
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:38,509,793...38,519,711 JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:36,938,682...36,949,657
Ensembl chr 2:36,939,750...36,948,966
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:41,207,192...41,228,573
Ensembl chr13:41,207,897...41,232,404
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IEA InterPro GO_REF:0000002 NCBI chr 6:38,509,793...38,519,711 JBrowse link
G CHST2 carbohydrate sulfotransferase 2 ISO (PMID:9722682) UniProtKB PMID:9722682 NCBI chr23:38,695,627...38,701,216 JBrowse link
G CHST3 carbohydrate sulfotransferase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:22,668,430...22,699,157
Ensembl chr 4:22,691,336...22,694,254
JBrowse link
G CHST4 carbohydrate sulfotransferase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:77,322,779...77,341,017
Ensembl chr 5:77,331,342...77,340,057
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:40,209,884...40,239,077
Ensembl chr  X:40,210,096...40,211,556
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,233,266...49,252,568
Ensembl chr 6:49,232,596...49,250,945
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IEA InterPro GO_REF:0000002 NCBI chr 2:36,938,682...36,949,657
Ensembl chr 2:36,939,750...36,948,966
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IEA InterPro GO_REF:0000002 NCBI chr13:41,207,192...41,228,573
Ensembl chr13:41,207,897...41,232,404
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr 8:28,992,173...29,005,511
Ensembl chr 8:28,993,227...29,005,435
JBrowse link
G HEXB hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417
JBrowse link
G LOC489707 carbohydrate sulfotransferase 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:75,266,932...75,280,790 JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:25,564,825...25,605,787
Ensembl chr10:25,568,053...25,570,413
JBrowse link
G NAGK N-acetylglucosamine kinase ISO (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chr17:51,367,477...51,376,461 JBrowse link
G NPM3 nucleophosmin/nucleoplasmin 3 IEA Ensembl GO_REF:0000107 NCBI chr28:14,373,446...14,375,624
Ensembl chr28:14,373,452...14,404,541
JBrowse link
G OGA O-GlcNAcase IEA Ensembl GO_REF:0000107 NCBI chr28:14,376,824...14,405,409
Ensembl chr28:14,373,452...14,404,541
JBrowse link
G RENBP renin binding protein ISO (MGI:1858659|PMID:10809771) RGD
MGI
PMID:10809771, PMID:11726282 MGI:1858659, RGD:5132613 NCBI chr  X:121,782,411...121,788,928
Ensembl chr  X:121,727,573...121,788,860
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RENBP renin binding protein ISO RGD PMID:11726282 RGD:5132613 NCBI chr  X:121,782,411...121,788,928
Ensembl chr  X:121,727,573...121,788,860
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANP N-acetylneuraminic acid phosphatase ISO PMID:16237198
(PMID:16237198)
UniProt
UniProtKB
PMID:16237198 RGD:8554804 NCBI chr23:1,757,963...1,776,758 JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IEA UniProt GO_REF:0000041 NCBI chr 6:38,509,793...38,519,711 JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:36,938,682...36,949,657
Ensembl chr 2:36,939,750...36,948,966
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:41,207,192...41,228,573
Ensembl chr13:41,207,897...41,232,404
JBrowse link
G RENBP renin binding protein IEA UniProtKB GO_REF:0000041 NCBI chr  X:121,782,411...121,788,928
Ensembl chr  X:121,727,573...121,788,860
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase IEA UniProt GO_REF:0000041 NCBI chr27:25,097,907...25,117,003
Ensembl chr27:25,098,091...25,116,965
JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) UniProt PMID:19820709 NCBI chr13:29,853,182...29,949,004
Ensembl chr13:29,846,834...29,872,918
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr34:19,497,577...19,589,125
Ensembl chr34:19,497,922...19,586,427
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:25,314,845...25,344,644
Ensembl chr 9:25,294,223...25,344,382
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,233,266...49,252,568
Ensembl chr 6:49,232,596...49,250,945
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 IEA UniProt GO_REF:0000041 NCBI chr11:1,378,275...1,419,643
Ensembl chr11:1,378,336...1,419,653
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:36,938,682...36,949,657
Ensembl chr 2:36,939,750...36,948,966
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:41,207,192...41,228,573
Ensembl chr13:41,207,897...41,232,404
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 8:28,992,173...29,005,511
Ensembl chr 8:28,993,227...29,005,435
JBrowse link
G LOC491239 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 IBA (PMID:21873635) GO_Central PMID:21873635
G LOC606974 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:48,528,738...48,532,888 JBrowse link
G LOC607011 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:48,564,889...48,566,999 JBrowse link
G PGM3 phosphoglucomutase 3 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr12:43,582,472...43,611,583
Ensembl chr12:43,584,940...43,611,777
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:20,190,026...20,228,353
Ensembl chr38:20,190,375...20,277,923
JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IEA Ensembl GO_REF:0000107 NCBI chr11:114,587...129,014
Ensembl chr11:115,631...129,091
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:25,314,845...25,344,644
Ensembl chr 9:25,294,223...25,344,382
JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chr 5:14,760,518...14,765,306
Ensembl chr 5:14,760,784...14,764,967
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:1,378,275...1,419,643
Ensembl chr11:1,378,336...1,419,653
JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA InterPro GO_REF:0000002 NCBI chr11:52,688,295...52,731,160
Ensembl chr11:52,689,343...52,731,231
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chr38:20,190,026...20,228,353
Ensembl chr38:20,190,375...20,277,923
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    metabolic process 10657
      organic substance metabolic process 10132
        carbohydrate derivative metabolic process 965
          amino sugar metabolic process 38
            N-acetylneuraminate metabolic process + 8
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 3
            UDP-N-acetylglucosamine metabolic process + 14
            amino sugar biosynthetic process + 11
            amino sugar catabolic process + 9
            fructosamine metabolic process + 1
            glucosamine-containing compound metabolic process + 22
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.