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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 1:111,290,851...111,320,566
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:203,178,931...203,186,704
Ensembl chr 1:203,178,931...203,186,704
JBrowse link
G CHI3L2 chitinase 3 like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:111,227,080...111,243,440
Ensembl chr 1:111,200,771...111,243,440
JBrowse link
G CHIA chitinase acidic IDA
IBA
(PMID:19435888)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19435888, PMID:21873635 NCBI chr 1:111,290,851...111,320,566
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
G CHIT1 chitinase 1 TAS
IBA
IDA
(PMID:9748235)
(PMID:21873635)
(PMID:19725875)
UniProtKB
GO_Central
PMID:9748235, PMID:19725875, PMID:21873635 NCBI chr 1:203,216,079...203,229,673
Ensembl chr 1:203,212,827...203,273,641
JBrowse link
G CTBS chitobiase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:84,549,611...84,574,440
Ensembl chr 1:84,549,611...84,574,480
JBrowse link
G OVGP1 oviductal glycoprotein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:111,414,319...111,427,735
Ensembl chr 1:111,414,319...111,427,735
JBrowse link
chitin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic NAS (PMID:10548734) UniProtKB PMID:10548734 NCBI chr 1:111,290,851...111,320,566
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN3K fructosamine 3 kinase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:82,735,615...82,751,196
Ensembl chr17:82,735,615...82,751,196
JBrowse link
G MDP1 magnesium dependent phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:24,213,943...24,216,066
Ensembl chr14:24,213,943...24,216,070
JBrowse link
fructoselysine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN3K fructosamine 3 kinase NAS (PMID:11016445) UniProtKB PMID:11016445 NCBI chr17:82,735,615...82,751,196
Ensembl chr17:82,735,615...82,751,196
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,769...69,387,254
Ensembl chr 2:69,319,769...69,387,254
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPDA1 glucosamine-6-phosphate deaminase 1 TAS
IBA
IMP
(PMID:21873635)
(PMID:9438414)
Reactome
GO_Central
UniProtKB
PMID:9438414, PMID:21873635 Reactome:R-HSA-6799604 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-6799604 NCBI chr 4:44,701,795...44,726,634
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,104...71,575,892
JBrowse link
G PGM3 phosphoglucomutase 3 NAS (PMID:11004509) UniProtKB PMID:11004509 NCBI chr 6:83,150,728...83,193,900
Ensembl chr 6:83,161,150...83,193,936
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA UniProtKB GO_REF:0000041 NCBI chr 9:36,214,441...36,277,056
Ensembl chr 9:36,214,441...36,277,056
JBrowse link
G NANP N-acetylneuraminic acid phosphatase IEA UniProtKB GO_REF:0000041 NCBI chr20:25,612,935...25,624,014
Ensembl chr20:25,612,935...25,624,014
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC093525.1 novel protein IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr16:2,513,965...2,527,955 JBrowse link
G AMDHD2 amidohydrolase domain containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:2,520,362...2,531,422
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:44,701,795...44,726,634
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IEA InterPro GO_REF:0000002 NCBI chr16:2,520,362...2,531,422
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G CHST1 carbohydrate sulfotransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:45,647,689...45,665,651
Ensembl chr11:45,647,689...45,665,622
JBrowse link
G CHST2 carbohydrate sulfotransferase 2 IDA
IBA
(PMID:9722682)
(PMID:21873635)
UniProtKB
GO_Central
PMID:9722682, PMID:21873635 NCBI chr 3:143,119,771...143,124,014
Ensembl chr 3:143,119,771...143,124,014
JBrowse link
G CHST3 carbohydrate sulfotransferase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:71,964,395...72,013,562
Ensembl chr10:71,964,395...72,013,558
JBrowse link
G CHST4 carbohydrate sulfotransferase 4 IDA
IBA
(PMID:10330415)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10330415, PMID:21873635 NCBI chr16:71,526,120...71,538,748
Ensembl chr16:71,525,233...71,538,748
Ensembl chr16:71,525,233...71,538,748
JBrowse link
G CHST5 carbohydrate sulfotransferase 5 IDA
IBA
(PMID:10491328), (PMID:12218059)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10491328, PMID:12218059, PMID:21873635 NCBI chr16:75,528,530...75,536,108
Ensembl chr16:75,528,535...75,535,247
JBrowse link
G CHST6 carbohydrate sulfotransferase 6 IC
IBA
IDA
(PMID:11181564)
(PMID:21873635)
(PMID:11352640)
UniProtKB
GO_Central
PMID:11181564, PMID:11352640, PMID:21873635 NCBI chr16:75,472,042...75,495,441
Ensembl chr16:75,472,052...75,495,445
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 IDA
IBA
(PMID:10913333)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10913333, PMID:21873635 NCBI chr  X:46,573,765...46,598,496
Ensembl chr  X:46,573,765...46,598,496
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IDA (PMID:10318803) UniProtKB PMID:10318803 NCBI chr 1:100,872,372...100,895,411
Ensembl chr 1:100,872,372...100,895,179
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IEA InterPro GO_REF:0000002 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IEA InterPro GO_REF:0000002 NCBI chr 4:44,701,795...44,726,634
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G HEXB hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 TAS (PMID:9892679) PINC PMID:9892679 NCBI chr22:33,162,237...33,922,824
Ensembl chr22:33,162,226...33,922,841
JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:39,457,012...39,492,194
Ensembl chr22:39,457,012...39,492,194
JBrowse link
G NAGK N-acetylglucosamine kinase TAS (PMID:10824116) PINC PMID:10824116 NCBI chr 2:71,068,278...71,079,808
Ensembl chr 2:71,064,344...71,079,808
JBrowse link
G OGA O-GlcNAcase IDA (PMID:11148210) UniProtKB PMID:11148210 NCBI chr10:101,784,445...101,818,709
Ensembl chr10:101,784,443...101,818,465
JBrowse link
G RENBP renin binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:153,935,263...153,944,643
Ensembl chr  X:153,935,269...153,944,687
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAGK N-acetylglucosamine kinase TAS (PMID:10824116) PINC PMID:10824116 NCBI chr 2:71,068,278...71,079,808
Ensembl chr 2:71,064,344...71,079,808
JBrowse link
G RENBP renin binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:153,935,263...153,944,643
Ensembl chr  X:153,935,269...153,944,687
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANP N-acetylneuraminic acid phosphatase IDA (PMID:16237198) UniProtKB PMID:16237198 NCBI chr20:25,612,935...25,624,014
Ensembl chr20:25,612,935...25,624,014
JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 TAS
IEA
(PMID:22692205) UniProtKB PMID:22692205 GO_REF:0000041 NCBI chr16:2,520,362...2,531,422
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:44,701,795...44,726,634
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
G NAGK N-acetylglucosamine kinase IEA
TAS
(PMID:22692205) UniProtKB PMID:22692205 GO_REF:0000041 NCBI chr 2:71,068,278...71,079,808
Ensembl chr 2:71,064,344...71,079,808
JBrowse link
G NPL N-acetylneuraminate pyruvate lyase IEA
TAS
(PMID:22692205) UniProtKB PMID:22692205 GO_REF:0000041 NCBI chr 1:182,789,773...182,830,384
Ensembl chr 1:182,789,293...182,830,384
JBrowse link
G RENBP renin binding protein TAS
IEA
(PMID:22692205) UniProtKB PMID:22692205 GO_REF:0000041 NCBI chr  X:153,935,263...153,944,643
Ensembl chr  X:153,935,269...153,944,687
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase IEA UniProtKB GO_REF:0000041 NCBI chr12:22,046,218...22,065,668
Ensembl chr12:22,046,218...22,065,674
JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase TAS (PMID:9305888) PINC PMID:9305888 NCBI chr 9:36,214,441...36,277,056
Ensembl chr 9:36,214,441...36,277,056
JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISS UniProtKB GO_REF:0000024 NCBI chr 8:133,454,848...133,572,534
Ensembl chr 8:133,454,848...133,571,940
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 IDA (PMID:23999306) UniProtKB PMID:23999306 NCBI chr 3:186,930,526...187,078,553
Ensembl chr 3:186,930,502...187,078,553
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IDA
IBA
(PMID:12678917), (PMID:14688233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:12678917, PMID:14688233, PMID:21873635 NCBI chr17:49,120,347...49,176,840
Ensembl chr17:49,132,460...49,176,840
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 IDA (PMID:11514575) UniProtKB PMID:11514575 NCBI chr 8:19,404,161...19,757,908
Ensembl chr 8:19,404,161...19,758,029
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IDA (PMID:10318803) UniProtKB PMID:10318803 NCBI chr 1:100,872,372...100,895,411
Ensembl chr 1:100,872,372...100,895,179
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 TAS Reactome Reactome:R-HSA-446210 NCBI chr16:2,520,362...2,531,422
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 TAS
IEA
Reactome
UniProtKB
GO_REF:0000041, Reactome:R-HSA-446210 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,769...69,387,254
Ensembl chr 2:69,319,769...69,387,254
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 TAS
IEA
Reactome
UniProtKB
GO_REF:0000041, Reactome:R-HSA-446210 NCBI chr 5:180,300,698...180,353,336
Ensembl chr 5:180,300,698...180,353,336
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:44,701,795...44,726,634
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 TAS
IBA
IEA
(PMID:21873635) Reactome
GO_Central
UniProtKB
PMID:21873635 GO_REF:0000041, Reactome:R-HSA-446210 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G NAGK N-acetylglucosamine kinase TAS Reactome Reactome:R-HSA-446210 NCBI chr 2:71,068,278...71,079,808
Ensembl chr 2:71,064,344...71,079,808
JBrowse link
G PGM3 phosphoglucomutase 3 TAS
IBA
IMP
IEA
(PMID:21873635)
(PMID:24589341)
Reactome
GO_Central
UniProtKB
PMID:21873635, PMID:24589341 GO_REF:0000041, Reactome:R-HSA-446210 NCBI chr 6:83,150,728...83,193,900
Ensembl chr 6:83,161,150...83,193,936
JBrowse link
G RENBP renin binding protein TAS Reactome Reactome:R-HSA-446210 NCBI chr  X:153,935,263...153,944,643
Ensembl chr  X:153,935,269...153,944,687
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 TAS
IBA
IEA
(PMID:21873635) Reactome
GO_Central
UniProtKB
PMID:21873635 GO_REF:0000041, Reactome:R-HSA-446210 NCBI chr 1:162,561,719...162,599,837
Ensembl chr 1:162,561,506...162,599,842
JBrowse link
G UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:137,077,475...137,084,538
Ensembl chr 9:137,077,517...137,084,539
JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 5:180,784,780...180,815,616
Ensembl chr 5:180,784,780...180,815,652
Ensembl chr 5:180,784,780...180,815,652
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:49,120,347...49,176,840
Ensembl chr17:49,132,460...49,176,840
JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr11:119,096,505...119,101,884
Ensembl chr11:119,096,503...119,108,331
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,769...69,387,254
Ensembl chr 2:69,319,769...69,387,254
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:180,300,698...180,353,336
Ensembl chr 5:180,300,698...180,353,336
JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA InterPro GO_REF:0000002 NCBI chr 9:36,214,441...36,277,056
Ensembl chr 9:36,214,441...36,277,056
JBrowse link
G SLC35A3 solute carrier family 35 member A3 TAS (PMID:10393322) PINC PMID:10393322 NCBI chr 1:99,968,401...100,035,634
Ensembl chr 1:99,969,351...100,035,634
Ensembl chr 1:99,969,351...100,035,634
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chr 1:162,561,719...162,599,837
Ensembl chr 1:162,561,506...162,599,842
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18672
    metabolic process 12302
      organic substance metabolic process 11734
        carbohydrate derivative metabolic process 1191
          amino sugar metabolic process 44
            N-acetylneuraminate metabolic process + 11
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 3
            UDP-N-acetylglucosamine metabolic process + 16
            amino sugar biosynthetic process + 13
            amino sugar catabolic process + 14
            fructosamine metabolic process + 2
            glucosamine-containing compound metabolic process + 30
            lipid X metabolic process 0
            mannosamine metabolic process + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.