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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia1 chitinase, acidic 1 IDA (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 3:106,113,382...106,132,118
Ensembl chr 3:106,113,229...106,132,120
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia1 chitinase, acidic 1 ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:1931335|PMID:11085997)
MGI
GO_Central
UniProt
PMID:11085997, PMID:21873635 GO_REF:0000096, MGI:1931335, MGI:4417868, MGI:4834177, MGI:6201960 NCBI chr 3:106,113,382...106,132,118
Ensembl chr 3:106,113,229...106,132,120
JBrowse link
G Chil1 chitinase-like 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:134,182,156...134,190,031
Ensembl chr 1:134,182,176...134,190,181
JBrowse link
G Chil3 chitinase-like 3 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:106,147,554...106,167,564
Ensembl chr 3:106,147,554...106,167,564
JBrowse link
G Chil4 chitinase-like 4 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:106,201,491...106,219,479
Ensembl chr 3:106,201,490...106,219,507
JBrowse link
G Chil5 chitinase-like 5 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:106,016,919...106,032,949
Ensembl chr 3:106,016,919...106,032,814
JBrowse link
G Chil6 chitinase-like 6 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:106,387,384...106,406,201
Ensembl chr 3:106,387,384...106,406,182
JBrowse link
G Chit1 chitinase 1 (chitotriosidase) ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:4834177, MGI:6201960 NCBI chr 1:134,111,242...134,151,541
Ensembl chr 1:134,111,242...134,151,540
JBrowse link
G Ctbs chitobiase IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:4417868, MGI:6201960 NCBI chr 3:146,450,449...146,465,849
Ensembl chr 3:146,449,795...146,465,849
JBrowse link
G Ovgp1 oviductal glycoprotein 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:105,973,802...105,987,423
Ensembl chr 3:105,973,711...105,987,423
JBrowse link
chitin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia1 chitinase, acidic 1 IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 3:106,113,382...106,132,118
Ensembl chr 3:106,113,229...106,132,120
JBrowse link
G Chit1 chitinase 1 (chitotriosidase) IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 1:134,111,242...134,151,541
Ensembl chr 1:134,111,242...134,151,540
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn3k fructosamine 3 kinase IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:1889989|PMID:11016445)
GO_Central
MGI
PMID:11016445, PMID:21873635 MGI:1889989, MGI:6201960 NCBI chr11:121,434,953...121,450,490
Ensembl chr11:121,434,913...121,450,491
JBrowse link
G Mdp1 magnesium-dependent phosphatase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr14:55,657,889...55,660,451
Ensembl chr14:55,657,879...55,660,508
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 6:87,042,846...87,092,207
Ensembl chr 6:87,042,846...87,092,197
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:4834177, MGI:6201960 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:69,574,998...69,592,332
Ensembl chr 5:69,573,108...69,592,340
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO (MGI:2675147|PMID:12965206) MGI PMID:12965206 MGI:2675147 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr14:45,376,421...45,388,987
Ensembl chr14:45,376,334...45,404,913
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr  X:101,640,011...101,684,351
Ensembl chr  X:101,640,060...101,684,351
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:24,155,833...24,163,733
Ensembl chr17:24,155,833...24,163,766
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:69,574,998...69,592,332
Ensembl chr 5:69,573,108...69,592,340
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr17:24,155,833...24,163,733
Ensembl chr17:24,155,833...24,163,766
JBrowse link
G Chst1 carbohydrate sulfotransferase 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:92,599,632...92,615,252
Ensembl chr 2:92,599,707...92,615,250
JBrowse link
G Chst2 carbohydrate sulfotransferase 2 IBA
TAS
ISO
(MGI:6201960|PMID:21873635)
(MGI:1277713|PMID:9712885)
GO_Central
MGI
PMID:9712885, PMID:21873635 GO_REF:0000096, MGI:1277713, MGI:4834177, MGI:6201960 NCBI chr 9:95,400,926...95,407,270
Ensembl chr 9:95,399,292...95,406,722
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:60,181,527...60,222,114
Ensembl chr10:60,181,532...60,219,260
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:4834177, MGI:6201960 NCBI chr 8:110,029,075...110,039,401
Ensembl chr 8:110,029,153...110,039,740
JBrowse link
G Chst5 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 IBA
ISO
IDA
(MGI:6201960|PMID:21873635)
(MGI:1934540|PMID:11278593), (MGI:3687902|PMID:12218059)
GO_Central
MGI
UniProt
PMID:11278593, PMID:12218059, PMID:21873635 GO_REF:0000096, MGI:1934540, MGI:3687902, MGI:4834177, MGI:6201960 NCBI chr 8:111,889,135...111,910,199
Ensembl chr 8:111,889,136...111,910,447
JBrowse link
G Chst7 carbohydrate (N-acetylglucosamino) sulfotransferase 7 IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:4834177, MGI:6201960 NCBI chr  X:20,058,963...20,099,991
Ensembl chr  X:20,059,560...20,097,521
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 ISO
IMP
(MGI:5882911|PMID:12562774) MGI
CAFA
PMID:12562774 GO_REF:0000096, MGI:4834177, MGI:5882911 NCBI chr 3:116,007,449...116,029,017
Ensembl chr 3:116,007,462...116,029,017
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 5:69,574,998...69,592,332
Ensembl chr 5:69,573,108...69,592,340
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr14:45,376,421...45,388,987
Ensembl chr14:45,376,334...45,404,913
JBrowse link
G Hexb hexosaminidase B ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr13:97,176,331...97,198,357
Ensembl chr13:97,176,331...97,198,357
JBrowse link
G Mgat3 mannoside acetylglucosaminyltransferase 3 IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:5613435|PMID:24619415)
GO_Central
MGI
PMID:21873635, PMID:24619415 MGI:5613435, MGI:6201960 NCBI chr15:80,173,651...80,215,519
Ensembl chr15:80,173,721...80,215,519
JBrowse link
G Nagk N-acetylglucosamine kinase IDA (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chr 6:83,794,983...83,802,556
Ensembl chr 6:83,794,982...83,804,018
JBrowse link
G Oga O-GlcNAcase ISO MGI GO_REF:0000096, MGI:4417868, MGI:4834177 NCBI chr19:45,750,255...45,783,644
Ensembl chr19:45,750,259...45,783,837
JBrowse link
G Renbp renin binding protein IMP
ISO
IBA
(MGI:1858659|PMID:10809771)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:10809771, PMID:21873635 GO_REF:0000096, MGI:1858659, MGI:4417868, MGI:6201960 NCBI chr  X:73,922,121...73,930,850
Ensembl chr  X:73,922,121...73,930,850
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Renbp renin binding protein IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:4417868, MGI:6201960 NCBI chr  X:73,922,121...73,930,850
Ensembl chr  X:73,922,121...73,930,850
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanp N-acetylneuraminic acid phosphatase ISO MGI GO_REF:0000096, MGI:4417868, MGI:4834177 NCBI chr 2:151,029,685...151,039,379
Ensembl chr 2:151,029,685...151,039,398
JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 TAS (MGI:5442449|PMID:22692205) UniProt PMID:22692205 MGI:5442449 NCBI chr17:24,155,833...24,163,733
Ensembl chr17:24,155,833...24,163,766
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:69,574,998...69,592,332
Ensembl chr 5:69,573,108...69,592,340
JBrowse link
G Nagk N-acetylglucosamine kinase TAS (MGI:5442449|PMID:22692205) UniProt PMID:22692205 MGI:5442449 NCBI chr 6:83,794,983...83,802,556
Ensembl chr 6:83,794,982...83,804,018
JBrowse link
G Npl N-acetylneuraminate pyruvate lyase TAS (MGI:5442449|PMID:22692205) UniProt PMID:22692205 MGI:5442449 NCBI chr 1:153,503,016...153,549,714
Ensembl chr 1:153,503,015...153,550,045
JBrowse link
G Renbp renin binding protein TAS (MGI:5442449|PMID:22692205) UniProt PMID:22692205 MGI:5442449 NCBI chr  X:73,922,121...73,930,850
Ensembl chr  X:73,922,121...73,930,850
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase TAS (MGI:1333609|PMID:10103025) MGI PMID:10103025 MGI:1333609 NCBI chr 4:44,034,075...44,084,177
Ensembl chr 4:44,034,075...44,084,177
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) UniProt PMID:19820709 NCBI chr15:67,102,875...67,176,946
Ensembl chr15:67,102,875...67,176,830
JBrowse link
G St6gal1 beta galactoside alpha 2,6 sialyltransferase 1 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr16:23,224,729...23,360,350
Ensembl chr16:23,224,740...23,360,350
JBrowse link
G St6gal2 beta galactoside alpha 2,6 sialyltransferase 2 IC (MGI:2651796|PMID:12603328) MGI PMID:12603328 MGI:2651796 NCBI chr17:55,445,118...55,514,581
Ensembl chr17:55,445,382...55,514,581
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galnt2 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 ISO (MGI:3038589|PMID:14724282) MGI PMID:14724282 MGI:3038589 NCBI chr13:13,954,474...13,999,103
Ensembl chr13:13,954,469...13,999,103
JBrowse link
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 IBA
ISO
ISS
(MGI:6201960|PMID:21873635)
(MGI:3703850|PMID:14688233)
GO_Central
MGI
UniProt
PMID:14688233, PMID:21873635 GO_REF:0000096, MGI:3703850, MGI:4834177, MGI:6201960 NCBI chr11:95,863,559...95,914,960
Ensembl chr11:95,865,943...95,914,891
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 8:68,356,781...68,735,621
Ensembl chr 8:68,356,781...68,735,146
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 ISO
IMP
(MGI:5882911|PMID:12562774) MGI
CAFA
PMID:12562774 GO_REF:0000096, MGI:4834177, MGI:5882911 NCBI chr 3:116,007,449...116,029,017
Ensembl chr 3:116,007,462...116,029,017
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:38,327,537...38,338,993
Ensembl chr18:38,327,535...38,339,003
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:69,574,998...69,592,332
Ensembl chr 5:69,573,108...69,592,340
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 TAS
IBA
(MGI:1355569|PMID:10777580)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:10777580, PMID:21873635 MGI:1355569, MGI:6201960 NCBI chr14:45,376,421...45,388,987
Ensembl chr14:45,376,334...45,404,913
JBrowse link
G Pgm3 phosphoglucomutase 3 IMP
ISO
IBA
(MGI:3723540|PMID:17548465)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:17548465, PMID:21873635 GO_REF:0000096, MGI:3723540, MGI:4834177, MGI:6201960 NCBI chr 9:86,552,476...86,571,878
Ensembl chr 9:86,554,377...86,571,842
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:170,141,223...170,174,964
Ensembl chr 1:170,141,938...170,174,957
JBrowse link
G Uap1l1 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:25,361,489...25,365,682
Ensembl chr 2:25,359,889...25,365,682
JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 mannoside acetylglucosaminyltransferase 1 IDA (MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:51667 NCBI chr11:49,244,191...49,263,027
Ensembl chr11:49,244,191...49,263,030
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 IMP
IBA
(MGI:56455|PMID:4031755)
(MGI:6201960|PMID:21873635)
(MGI:65525|PMID:8137279)
MGI
GO_Central
PMID:4031755, PMID:8137279, PMID:21873635 MGI:56455, MGI:6201960, MGI:65525 NCBI chr11:95,863,559...95,914,960
Ensembl chr11:95,865,943...95,914,891
JBrowse link
G Dpagt1 dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 9:44,325,857...44,333,895
Ensembl chr 9:44,326,019...44,333,900
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:4417868, MGI:6201960 NCBI chr 6:87,042,846...87,092,207
Ensembl chr 6:87,042,846...87,092,197
JBrowse link
G Gfpt2 glutamine fructose-6-phosphate transaminase 2 IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:49,794,155...49,838,620
Ensembl chr11:49,794,178...49,838,613
JBrowse link
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 4:44,034,075...44,084,177
Ensembl chr 4:44,034,075...44,084,177
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:170,141,223...170,174,964
Ensembl chr 1:170,141,938...170,174,957
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11305
      organic substance metabolic process 10760
        carbohydrate derivative metabolic process 945
          amino sugar metabolic process 44
            N-acetylneuraminate metabolic process + 11
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 4
            UDP-N-acetylglucosamine metabolic process + 12
            amino sugar biosynthetic process + 8
            amino sugar catabolic process + 16
            fructosamine metabolic process + 2
            glucosamine-containing compound metabolic process + 27
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.