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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:113,885,541...113,895,033
Ensembl chr 9:113,885,542...113,895,510
JBrowse link
G CHI3L2 chitinase 3 like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:109,081,543...109,099,172
Ensembl chr 4:109,081,437...109,099,098
JBrowse link
G CHIA chitinase acidic IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
JBrowse link
G CHIT1 chitinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,716...113,941,433
JBrowse link
G CTBS chitobiase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:129,173,399...129,207,868
Ensembl chr 6:129,173,444...129,207,863
JBrowse link
G OVGP1 oviductal glycoprotein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:108,929,034...108,941,040
Ensembl chr 4:108,917,549...108,941,042
JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN3K fructosamine 3 kinase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:450,427...463,756
Ensembl chr12:450,428...473,394
JBrowse link
G MDP1 magnesium dependent phosphatase 1 ISO RGD PMID:16670083 RGD:2326017 NCBI chr 7:75,087,443...75,088,944
Ensembl chr 7:75,087,468...75,093,762
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,991
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr 1:182,404,460...182,423,453
Ensembl chr 1:182,407,215...182,423,443
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,097...57,558,519
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:39,523,076...39,532,590 JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,991
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IEA InterPro GO_REF:0000002 NCBI chr 3:39,523,076...39,532,590 JBrowse link
G CHST1 carbohydrate sulfotransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:16,772,210...16,789,031
Ensembl chr 2:16,772,208...16,789,031
JBrowse link
G CHST2 carbohydrate sulfotransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:83,818,652...83,822,135
Ensembl chr13:83,819,416...83,821,780
JBrowse link
G CHST4 carbohydrate sulfotransferase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:14,532,379...14,544,502
Ensembl chr 6:14,535,863...14,549,890
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:41,192,993...41,234,654
Ensembl chr  X:41,193,018...41,232,589
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:117,396,601...117,420,707
Ensembl chr 4:117,396,615...117,420,714
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IEA InterPro GO_REF:0000002 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr 1:182,404,460...182,423,453
Ensembl chr 1:182,407,215...182,423,443
JBrowse link
G HEXB hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
JBrowse link
G LOC100522551 carbohydrate sulfotransferase 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:12,166,178...12,188,165 JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,964...8,807,970
JBrowse link
G NAGK N-acetylglucosamine kinase ISO (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chr 3:71,496,191...71,513,020
Ensembl chr 3:71,500,337...71,512,998
JBrowse link
G OGA O-GlcNAcase IEA Ensembl GO_REF:0000107 NCBI chr14:112,822,494...112,851,215
Ensembl chr14:112,822,498...112,851,204
JBrowse link
G PSAP prosaposin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763
JBrowse link
G RENBP renin binding protein IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr  X:124,662,957...124,670,522
Ensembl chr  X:124,657,675...124,672,235
JBrowse link
G YIPF7 Yip1 domain family member 7 IEA InterPro GO_REF:0000002 NCBI chr 8:35,135,338...35,161,003
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RENBP renin binding protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,662,957...124,670,522
Ensembl chr  X:124,657,675...124,672,235
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANP N-acetylneuraminic acid phosphatase ISO PMID:16237198
(PMID:16237198)
UniProt
UniProtKB
PMID:16237198 RGD:8554804 NCBI chr17:31,206,265...31,217,366 JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 IEA UniProt GO_REF:0000041 NCBI chr 3:39,523,076...39,532,590 JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,991
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
G RENBP renin binding protein IEA UniProt GO_REF:0000041 NCBI chr  X:124,662,957...124,670,522
Ensembl chr  X:124,657,675...124,672,235
JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMAH cytidine monophosphate-N-acetylneuraminic acid hydroxylase IEA UniProt GO_REF:0000041 NCBI chr 7:19,879,367...19,917,761
Ensembl chr 7:19,870,956...20,002,956
JBrowse link
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase IEA UniProt GO_REF:0000041 NCBI chr 5:51,438,175...51,458,531
Ensembl chr 5:51,438,019...51,459,338
JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 IDA (PMID:19820709) UniProt PMID:19820709 NCBI chr 4:7,814,492...7,911,053
Ensembl chr 4:7,814,694...7,909,528
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:124,699,622...124,837,847
Ensembl chr13:124,700,133...124,837,843
JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:25,368,234...25,410,021 JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (PMID:11514575) UniProtKB PMID:11514575 NCBI chr17:12,145,141...12,498,777 JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:117,396,601...117,420,707
Ensembl chr 4:117,396,615...117,420,714
JBrowse link
G LOC110255214 beta-1,4 N-acetylgalactosaminyltransferase 2-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:25,270,162...25,303,023 JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IEA UniProt GO_REF:0000041 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 IEA UniProt GO_REF:0000041 NCBI chr 2:78,285,208...78,328,288
Ensembl chr 2:78,285,203...78,329,002
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,991
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 1:182,404,460...182,423,453
Ensembl chr 1:182,407,215...182,423,443
JBrowse link
G PGM3 phosphoglucomutase 3 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 1:83,003,622...83,029,392
Ensembl chr 1:83,003,655...83,029,899
JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:87,960,056...87,994,032
Ensembl chr 4:87,955,938...87,993,973
JBrowse link
G UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 IBA (PMID:21873635) GO_Central PMID:21873635
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 2:57,849,185...57,920,410
Ensembl chr 2:57,900,216...57,920,977
JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:25,368,234...25,410,021 JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chr 9:46,308,824...46,316,905
Ensembl chr 9:46,310,870...46,316,848
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:78,285,208...78,328,288
Ensembl chr 2:78,285,203...78,329,002
JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA InterPro GO_REF:0000002 NCBI chr 1:236,998,754...237,065,819
Ensembl chr 1:236,998,757...237,065,767
JBrowse link
G LOC110255214 beta-1,4 N-acetylgalactosaminyltransferase 2-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:25,270,162...25,303,023 JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chr 4:87,960,056...87,994,032
Ensembl chr 4:87,955,938...87,993,973
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16552
    metabolic process 10502
      organic substance metabolic process 9939
        carbohydrate derivative metabolic process 927
          amino sugar metabolic process 42
            N-acetylneuraminate metabolic process + 9
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 4
            UDP-N-acetylglucosamine metabolic process + 13
            amino sugar biosynthetic process + 9
            amino sugar catabolic process + 11
            fructosamine metabolic process + 2
            glucosamine-containing compound metabolic process + 25
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.