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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar metabolic process
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Accession:GO:0006040 term browser browse the term
Definition:The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar metabolism;   aminosaccharide metabolic process;   aminosaccharide metabolism


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chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chit1 chitinase 1 ISO (PMID:19725875) UniProtKB PMID:19725875 NCBI chrNW_004936567:1,373,727...1,385,694 JBrowse link
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004936608:1,048,696...1,064,383 JBrowse link
fructosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn3k fructosamine 3 kinase ISO (MGI:1889989|PMID:11016445) MGI PMID:11016445 MGI:1889989 NCBI chrNW_004936923:223,632...235,176 JBrowse link
G LOC101963005 magnesium-dependent phosphatase 1 ISO RGD PMID:16670083 RGD:2326017 NCBI chrNW_004936722:339,510...344,928 JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chrNW_004936491:13,603,256...13,665,298 JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO (PMID:9438414) UniProtKB PMID:9438414 NCBI chrNW_004936504:12,181,544...12,192,596 JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chrNW_004936697:2,079,396...2,087,602 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chrNW_004936762:99,335...137,833 JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst2 carbohydrate sulfotransferase 2 ISO (PMID:9722682) UniProtKB PMID:9722682 NCBI chrNW_004936540:4,692,450...4,696,347 JBrowse link
G Chst4 carbohydrate sulfotransferase 4 ISO (PMID:10330415) UniProtKB PMID:10330415 NCBI chrNW_004936475:22,227,702...22,229,022 JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO (PMID:10913333) UniProtKB PMID:10913333 NCBI chrNW_004936502:12,426,821...12,446,127 JBrowse link
G Extl2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chrNW_004936748:890,821...910,208 JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chrNW_004936697:2,079,396...2,087,602 JBrowse link
G Hexb hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chrNW_004936549:1,918,482...1,943,665 JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:5613435|PMID:24619415) MGI PMID:24619415 MGI:5613435 NCBI chrNW_004936492:2,144,775...2,149,344 JBrowse link
G Nagk N-acetylglucosamine kinase ISO (MGI:1859071|PMID:10824116) MGI PMID:10824116 MGI:1859071 NCBI chrNW_004936491:15,183,493...15,193,069 JBrowse link
G Oga O-GlcNAcase ISO (PMID:11148210) UniProtKB
RGD
PMID:11148210, PMID:19139380 RGD:2305938 NCBI chrNW_004936600:3,983,983...3,996,360 JBrowse link
G Renbp renin binding protein ISO (MGI:1858659|PMID:10809771) RGD
MGI
PMID:10809771, PMID:11726282 MGI:1858659, RGD:5132613 NCBI chrNW_004936809:817,392...823,926 JBrowse link
N-acetylmannosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Renbp renin binding protein ISO RGD PMID:11726282 RGD:5132613 NCBI chrNW_004936809:817,392...823,926 JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanp N-acetylneuraminic acid phosphatase ISO (PMID:16237198) UniProtKB
UniProt
PMID:16237198 RGD:8554804 NCBI chrNW_004936620:235,013...245,138 JBrowse link
N-acetylneuraminate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:19820709) UniProt PMID:19820709 NCBI chrNW_004936470:15,860,669...15,934,500 JBrowse link
G St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ISO (PMID:23999306) UniProtKB PMID:23999306 NCBI chrNW_004936578:2,966,690...3,107,237 JBrowse link
UDP-N-acetylgalactosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (PMID:12678917), (PMID:14688233) UniProtKB PMID:12678917, PMID:14688233 NCBI chrNW_004936490:12,317,483...12,342,934 JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (PMID:11514575) UniProtKB PMID:11514575 NCBI chrNW_004936555:3,639,459...3,807,483 JBrowse link
G Extl2 exostosin like glycosyltransferase 2 ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
UniProtKB
CAFA
PMID:10318803, PMID:12562774 MGI:5882911 NCBI chrNW_004936748:890,821...910,208 JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgm3 phosphoglucomutase 3 ISO (PMID:24589341)
(MGI:3723540|PMID:17548465)
UniProtKB
MGI
PMID:17548465, PMID:24589341 MGI:3723540 NCBI chrNW_004936510:7,586,817...7,622,586 JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:51667 NCBI chrNW_004936826:344,452...364,929 JBrowse link
UDP-N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 ISO (MGI:56455|PMID:4031755)
(MGI:65525|PMID:8137279)
MGI PMID:4031755, PMID:8137279 MGI:56455, MGI:65525 NCBI chrNW_004936490:12,317,483...12,342,934 JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chrNW_004936542:4,049,107...4,054,100 JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chrNW_004936491:13,603,256...13,665,298 JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO RGD PMID:6303311 RGD:1625549 NCBI chrNW_004936831:733,072...770,495 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12003
    metabolic process 7586
      organic substance metabolic process 7279
        carbohydrate derivative metabolic process 698
          amino sugar metabolic process 26
            N-acetylneuraminate metabolic process + 3
            UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process + 0
            UDP-N-acetylgalactosamine metabolic process + 3
            UDP-N-acetylglucosamine metabolic process + 6
            amino sugar biosynthetic process + 3
            amino sugar catabolic process + 4
            fructosamine metabolic process + 2
            glucosamine-containing compound metabolic process + 15
            lipid X metabolic process 0
            mannosamine metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.