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ONTOLOGY REPORT - ANNOTATIONS


Term:generation of precursor metabolites and energy
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Accession:GO:0006091 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
Synonyms:broad_synonym: energy pathways
 related_synonym: intermediary metabolism;   metabolic energy generation
 xref: MIPS_funcat:02.45.15


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generation of precursor metabolites and energy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:1600115
RGD:1624291
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Crot carnitine O-octanoyltransferase JBrowse link 4 22,079,837 22,116,265 RGD:1600115
RGD:8553665
RGD:1624291
G Cyb5r4 cytochrome b5 reductase 4 JBrowse link 8 94,693,273 94,757,989 RGD:1600115
RGD:13792537
RGD:1624291
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 JBrowse link 17 76,306,585 76,358,058 RGD:1624291
RGD:1600115
G Dio1 iodothyronine deiodinase 1 JBrowse link 5 126,894,837 126,911,532 RGD:727335
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:1624291
RGD:1600115
G Gnpda1 glucosamine-6-phosphate deaminase 1 JBrowse link 18 31,479,117 31,489,154 RGD:1624291
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:631242
G LOC103693780 2-oxoglutarate dehydrogenase, mitochondrial-like JBrowse link 14 86,599,906 86,614,963 RGD:1600115
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:1600115
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:1600115
RGD:1624291
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:1624291
G Ucp1 uncoupling protein 1 JBrowse link 19 24,456,976 24,464,808 RGD:70670
G Vgf VGF nerve growth factor inducible JBrowse link 12 22,677,302 22,680,630 RGD:1624291
acetoacetic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
aerobic respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1598765
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:1600115
RGD:1624291
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 JBrowse link 7 3,342,630 3,346,238 RGD:1624291
RGD:1600115
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:1624291
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:1624291
G Cox6a1 cytochrome c oxidase subunit 6A1 JBrowse link 12 47,024,442 47,027,495 RGD:13792537
G Cox6a2 cytochrome c oxidase subunit 6A2 JBrowse link 1 199,624,037 199,626,255 RGD:13792537
G Fxn frataxin JBrowse link 1 242,123,975 242,152,834 RGD:1600115
RGD:1624291
G LOC100362172 LRRGT00112-like JBrowse link 17 22,655,291 22,678,983 RGD:13792537
G LOC259246 alpha-2u globulin PGCL1 RGD:1600115
G Mdh2 malate dehydrogenase 2 JBrowse link 12 23,941,451 23,954,406 RGD:1624291
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:13792537
G Mt-co3 mitochondrially encoded cytochrome c oxidase III JBrowse link MT 8,599 9,382 RGD:13792537
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:13792537
G Mt-nd4 mitochondrially encoded NADH dehydrogenase 4 JBrowse link MT 10,160 11,537 RGD:13792537
G Mtfr1 mitochondrial fission regulator 1 JBrowse link 2 104,005,696 104,040,914 RGD:1624291
RGD:13792537
RGD:1600115
G Mtfr1l mitochondrial fission regulator 1-like JBrowse link 5 152,736,580 152,746,683 RGD:13792537
G Mtfr2 mitochondrial fission regulator 2 JBrowse link 1 15,834,779 15,850,424 RGD:1624291
RGD:13792537
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 JBrowse link 7 12,318,776 12,326,403 RGD:13792537
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 JBrowse link 1 219,141,289 219,144,610 RGD:13792537
G Oxa1l OXA1L, mitochondrial inner membrane protein JBrowse link 15 33,004,957 33,012,584 RGD:1624291
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:1624291
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:13792537
G Sirt3 sirtuin 3 JBrowse link 1 213,613,502 213,636,061 RGD:1624291
G Ucn urocortin JBrowse link 6 26,602,144 26,602,974 RGD:5508185
G Uqcr10 ubiquinol-cytochrome c reductase, complex III subunit X JBrowse link 14 84,935,480 84,937,741 RGD:13792537
G Uqcrb ubiquinol-cytochrome c reductase binding protein JBrowse link 7 71,264,501 71,269,869 RGD:13792537
G Uqcrh ubiquinol-cytochrome c reductase hinge protein JBrowse link 5 134,919,040 134,927,235 RGD:13792537
ATP generation from ADP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07046778.1 RGD:1600115
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:13792537
G Mt-nd4l mitochondrially encoded NADH 4L dehydrogenase JBrowse link MT 9,870 10,166 RGD:1600115
G Mt-nd5 mitochondrially encoded NADH dehydrogenase 5 JBrowse link MT 11,736 13,565 RGD:1600115
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link 9 69,919,863 69,953,182 RGD:1600115
canonical glycolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:2302788
RGD:1624291
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302788
G Foxk1 forkhead box K1 JBrowse link 12 14,183,436 14,244,634 RGD:1624291
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
G LOC100911625 gamma-enolase-like JBrowse link 9 20,251,564 20,260,465 RGD:2302788
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:13792537
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:13792537
RGD:1600115
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:13792537
cellular respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:628373
G Coq10a coenzyme Q10A JBrowse link 7 2,780,930 2,788,189 RGD:13792537
G Coq10b coenzyme Q10B JBrowse link 9 61,655,963 61,675,880 RGD:13792537
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:1624291
RGD:13792537
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:1624291
G Lyrm7 LYR motif containing 7 JBrowse link 10 40,183,061 40,201,992 RGD:1624291
G Ndufaf2 NADH:ubiquinone oxidoreductase complex assembly factor 2 JBrowse link 2 39,322,145 39,434,535 RGD:1624291
RGD:13792537
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link 9 69,919,863 69,953,182 RGD:1600115
RGD:1624291
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:1624291
G Nfatc3 nuclear factor of activated T-cells 3 JBrowse link 19 38,039,542 38,114,003 RGD:1624291
G Nfatc4 nuclear factor of activated T-cells 4 JBrowse link 15 34,493,163 34,502,238 RGD:1624291
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1624291
RGD:1600115
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 JBrowse link 9 30,243,261 30,251,478 RGD:1624291
G Slc25a13 solute carrier family 25 member 13 JBrowse link 4 31,134,165 31,757,006 RGD:1624291
G Slc25a25 solute carrier family 25 member 25 JBrowse link 3 11,442,396 11,476,186 RGD:1624291
electron transport chain term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07031937.1 RGD:1600115
G AABR07057237.1 RGD:1600115
G AABR07060996.1 RGD:1600115
G AC114204.1 RGD:1600115
G AC128290.1 RGD:1600115
G Acadsb acyl-CoA dehydrogenase, short/branched chain JBrowse link 1 201,981,362 202,022,771 RGD:1600115
G Aox1 aldehyde oxidase 1 JBrowse link 9 64,929,682 65,007,872 RGD:1600115
G Aox2 aldehyde oxidase 2 JBrowse link 9 65,175,455 65,265,149 RGD:1600115
G Aox3 aldehyde oxidase 3 JBrowse link 9 65,013,831 65,099,433 RGD:1600115
G Aox4 aldehyde oxidase 4 JBrowse link 9 65,110,330 65,167,188 RGD:1600115
G Ciapin1 cytokine induced apoptosis inhibitor 1 JBrowse link 19 10,596,923 10,612,414 RGD:1600115
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:1600115
G Cox6a2 cytochrome c oxidase subunit 6A2 JBrowse link 1 199,624,037 199,626,255 RGD:1600115
G Cox6c cytochrome c oxidase subunit 6C JBrowse link 7 74,723,177 74,735,650 RGD:1600115
G Cox7a1 cytochrome c oxidase subunit 7A1 JBrowse link 1 88,619,619 88,650,672 RGD:1600115
G Cox7a2 cytochrome c oxidase subunit 7A2 JBrowse link 8 87,209,529 87,213,627 RGD:1600115
G Cox7a2l cytochrome c oxidase subunit 7A2 like JBrowse link 6 6,695,807 6,709,790 RGD:1600115
G Cox7a2l2 cytochrome c oxidase subunit VIIa polypeptide 2-like 2 JBrowse link 14 52,661,933 52,662,375 RGD:1600115
G Cox7b cytochrome c oxidase subunit 7B JBrowse link X 77,065,427 77,071,676 RGD:1600115
G Cox7b2 cytochrome c oxidase subunit 7B2 JBrowse link 14 39,256,685 39,368,886 RGD:1600115
G Cox8a cytochrome c oxidase subunit 8A JBrowse link 1 222,466,575 222,468,896 RGD:1600115
G Cox8c cytochrome c oxidase subunit 8C JBrowse link 6 126,766,967 126,768,290 RGD:1600115
G Cyb561 cytochrome b-561 JBrowse link 10 94,136,993 94,147,567 RGD:1600115
G Cyb5a cytochrome b5 type A JBrowse link 18 81,694,818 81,726,821 RGD:1600115
G Cyb5b cytochrome b5 type B JBrowse link 19 39,357,814 39,391,680 RGD:1600115
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:1600115
G Cybb cytochrome b-245 beta chain JBrowse link X 14,578,330 14,610,049 RGD:1600115
G Etfa electron transfer flavoprotein subunit alpha JBrowse link 8 60,028,786 60,086,352 RGD:1600115
G Etfb electron transfer flavoprotein subunit beta JBrowse link 1 98,472,776 98,486,940 RGD:1600115
G Etfdh electron transfer flavoprotein dehydrogenase JBrowse link 2 178,367,547 178,389,641 RGD:1624291
G Fdx1 ferredoxin 1 JBrowse link 8 56,373,729 56,393,199 RGD:1600115
G Fdx2 ferredoxin 2 JBrowse link 8 22,086,534 22,091,450 RGD:1600115
G Glrx glutaredoxin JBrowse link 2 2,606,032 2,615,944 RGD:1600115
G Glrx2 glutaredoxin 2 JBrowse link 13 60,529,057 60,552,115 RGD:1600115
G Glrx3 glutaredoxin 3 JBrowse link 1 209,768,696 209,799,912 RGD:1600115
G Glrx5 glutaredoxin 5 JBrowse link 6 128,750,503 128,760,880 RGD:1600115
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 JBrowse link 14 41,663,688 41,787,331 RGD:1600115
G LOC100912008 uncharacterized LOC100912008 JBrowse link 3 4,869,790 4,872,633 RGD:1600115
G LOC305806 similar to glutaredoxin 1 (thioltransferase); glutaredoxin JBrowse link 15 5,791,045 5,792,106 RGD:1600115
G LOC687508 similar to Cytochrome c oxidase polypeptide VIIa-heart, mitochondrial precursor (Cytochrome c oxidase subunit VIIa-H) (COX VIIa-M) JBrowse link 1 91,070,593 91,096,190 RGD:1600115
G MGC105649 hypothetical LOC302884 JBrowse link 3 114,772,603 114,776,156 RGD:1600115
G Ndufa4 NDUFA4, mitochondrial complex associated JBrowse link 4 38,233,680 38,240,848 RGD:1600115
G Ndufa4l2 NDUFA4, mitochondrial complex associated like 2 JBrowse link 7 70,821,904 70,824,085 RGD:1600115
G Ndufb3 NADH:ubiquinone oxidoreductase subunit B3 JBrowse link 9 65,478,496 65,488,708 RGD:1600115
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:1600115
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:1600115
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link 17 32,131,847 32,158,559 RGD:1600115
G Por cytochrome p450 oxidoreductase JBrowse link 12 23,998,411 24,017,063 RGD:1600115
G Ptges2 prostaglandin E synthase 2 JBrowse link 3 11,424,195 11,431,379 RGD:1600115
G Sh3bgrl3 SH3 domain binding glutamate-rich protein like 3 JBrowse link 5 152,357,270 152,358,643 RGD:1600115
G Steap4 STEAP4 metalloreductase JBrowse link 4 23,112,682 23,135,354 RGD:1600115
G Surf1 SURF1, cytochrome c oxidase assembly factor JBrowse link 3 5,461,717 5,464,560 RGD:1600115
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:1600115
G Txnrd2 thioredoxin reductase 2 JBrowse link 11 86,667,994 86,716,063 RGD:1600115
G Txnrd3 thioredoxin reductase 3 JBrowse link 4 121,612,332 121,650,543 RGD:1600115
G Uqcr11 ubiquinol-cytochrome c reductase, complex III subunit XI JBrowse link 7 12,171,146 12,175,838 RGD:1600115
G Wdr93 WD repeat domain 93 JBrowse link 1 141,481,353 141,531,254 RGD:1600115
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:1600115
energy reserve metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrf5 adhesion G protein-coupled receptor F5 JBrowse link 9 20,091,121 20,195,706 RGD:1624291
RGD:1600115
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:1624291
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:1624291
RGD:1600115
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:625499
RGD:13792537
G LOC259246 alpha-2u globulin PGCL1 RGD:1600115
G Mc4r melanocortin 4 receptor JBrowse link 18 62,612,838 62,614,725 RGD:1600780
G Mrap2 melanocortin 2 receptor accessory protein 2 JBrowse link 8 94,801,336 94,858,192 RGD:1624291
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:1624291
RGD:1600115
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1624291
G Prlh prolactin releasing hormone JBrowse link 9 98,111,391 98,114,831 RGD:1624291
ethanol oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:1642948
RGD:13792537
RGD:1624291
RGD:1642949
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:1358222
RGD:1624291
RGD:1600115
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:1600115
G Adh6 alcohol dehydrogenase 6 (class V) JBrowse link 2 243,656,568 243,687,857 RGD:1624291
RGD:13792537
G Adh6a alcohol dehydrogenase 6A (class V) JBrowse link 2 243,577,086 243,599,357 RGD:13792537
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:1600115
RGD:13792537
RGD:1624291
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldha lactate dehydrogenase A JBrowse link 1 102,900,288 102,909,713 RGD:1624291
glycerophosphate shuttle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpd1 glycerol-3-phosphate dehydrogenase 1 JBrowse link 7 141,368,928 141,377,931 RGD:1624291
glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
RGD:1600115
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase JBrowse link 2 219,788,234 219,843,189 RGD:1600115
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8553850
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1600115
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
G Gbe1 1,4-alpha-glucan branching enzyme 1 JBrowse link 11 7,210,169 7,485,895 RGD:1642743
RGD:1600115
RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1581879
G Gyg1 glycogenin 1 JBrowse link 2 104,916,734 104,958,219 RGD:2303736
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2304070
G Gys1 glycogen synthase 1 JBrowse link 1 101,427,195 101,447,092 RGD:2303748
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1642743
G Gys2 glycogen synthase 2 JBrowse link 4 176,638,632 176,679,805 RGD:1582633
RGD:13792537
RGD:1624291
RGD:8554840
RGD:8554625
RGD:1600115
RGD:1642743
RGD:2304128
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 17 18,059,382 18,060,572 RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:1624291
RGD:1600115
G Pgm1 phosphoglucomutase 1 JBrowse link 5 118,743,632 118,803,055 RGD:13792537
G Phkg1 phosphorylase kinase catalytic subunit gamma 1 JBrowse link 12 30,450,431 30,464,314 RGD:1600115
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 JBrowse link 1 199,019,298 199,032,053 RGD:1600115
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:1624291
RGD:1600115
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 JBrowse link 9 81,999,368 82,008,620 RGD:1624291
G Ptges3 prostaglandin E synthase 3 JBrowse link 7 2,479,267 2,497,024 RGD:1624291
glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb1 adrenoceptor beta 1 JBrowse link 1 277,537,585 277,538,985 RGD:5129142
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase JBrowse link 2 219,788,234 219,843,189 RGD:1598779
RGD:13792537
RGD:1642743
RGD:2304191
RGD:1642741
G G6pc glucose-6-phosphatase, catalytic subunit JBrowse link 10 89,286,009 89,296,213 RGD:1624291
G Gaa glucosidase, alpha, acid JBrowse link 10 108,395,873 108,412,999 RGD:1599504
RGD:1624291
RGD:1600115
RGD:1599506
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:1600115
G Pygb glycogen phosphorylase B JBrowse link 3 146,581,063 146,629,504 RGD:1642804
RGD:13792537
RGD:2304126
RGD:1642809
G Pygl glycogen phosphorylase L JBrowse link 6 92,597,759 92,643,734 RGD:1642805
RGD:13792537
RGD:1642743
RGD:2304128
G Pygm glycogen phosphorylase, muscle associated JBrowse link 1 221,756,325 221,771,142 RGD:1599986
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1642743
RGD:1599897
RGD:2304126
RGD:1642811
G Stbd1 starch binding domain 1 JBrowse link 14 16,976,355 16,979,760 RGD:1624291
RGD:1600115
glycogen metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07037995.1 RGD:1600115
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase JBrowse link 2 219,788,234 219,843,189 RGD:1624291
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link 1 5,448,958 5,571,512 RGD:1624291
RGD:1600115
G G6pc glucose-6-phosphatase, catalytic subunit JBrowse link 10 89,286,009 89,296,213 RGD:1624291
G Gaa glucosidase, alpha, acid JBrowse link 10 108,395,873 108,412,999 RGD:1624291
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1624291
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1600115
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
RGD:1600115
G Gys1 glycogen synthase 1 JBrowse link 1 101,427,195 101,447,092 RGD:1642811
RGD:2304186
G Gys2 glycogen synthase 2 JBrowse link 4 176,638,632 176,679,805 RGD:2304113
RGD:2304117
G Il6st interleukin 6 signal transducer JBrowse link 2 44,279,199 44,319,427 RGD:1624291
RGD:1600115
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:1624291
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 17 18,059,382 18,060,572 RGD:1624291
G Pcdh12 protocadherin 12 JBrowse link 18 31,415,533 31,431,108 RGD:1624291
G Phka1 phosphorylase kinase regulatory subunit alpha 1 JBrowse link X 72,377,020 72,515,385 RGD:1600115
G Phkb phosphorylase kinase regulatory subunit beta JBrowse link 19 22,031,684 22,281,788 RGD:1600115
G Phkg1 phosphorylase kinase catalytic subunit gamma 1 JBrowse link 12 30,450,431 30,464,314 RGD:729579
RGD:2305955
RGD:2304176
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 JBrowse link 1 199,019,298 199,032,053 RGD:727546
RGD:2304176
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:1600115
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:1600115
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:1600115
G Ppp1r1a protein phosphatase 1, regulatory (inhibitor) subunit 1A JBrowse link 7 145,146,480 145,154,131 RGD:1600115
G Ppp1r2 protein phosphatase 1, regulatory (inhibitor) subunit 2 JBrowse link 11 72,748,789 73,034,683 RGD:1600115
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B JBrowse link 16 60,415,192 60,427,498 RGD:1600115
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:1600115
RGD:1624291
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D JBrowse link 3 173,950,613 173,953,684 RGD:1600115
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:1600115
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 JBrowse link 4 6,559,153 6,799,888 RGD:1624291
G Pygb glycogen phosphorylase B JBrowse link 3 146,581,063 146,629,504 RGD:2304136
G Pygl glycogen phosphorylase L JBrowse link 6 92,597,759 92,643,734 RGD:1601233
RGD:1624291
RGD:2304136
RGD:2304119
RGD:2304117
RGD:2304115
RGD:2304113
G Pygm glycogen phosphorylase, muscle associated JBrowse link 1 221,756,325 221,771,142 RGD:2304119
RGD:2304186
RGD:1642811
G Slc37a4 solute carrier family 37 member 4 JBrowse link 8 48,716,914 48,723,024 RGD:61591
RGD:1624291
G Stk40 serine/threonine kinase 40 JBrowse link 5 144,112,612 144,150,653 RGD:1624291
RGD:1600115
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
G Ugp2 UDP-glucose pyrophosphorylase 2 JBrowse link 14 106,208,174 106,249,322 RGD:13792537
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:1600115
glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005667.1 RGD:13792537
G AABR07006451.1 RGD:13792537
G AABR07013200.1 RGD:13792537
G AABR07021086.1 RGD:13792537
G AABR07022022.1 RGD:13792537
G AABR07024795.1 RGD:13792537
G AABR07025010.1 RGD:1600115
G AABR07028748.1 RGD:13792537
G AABR07029675.1 RGD:1600115
G AABR07030729.1 RGD:1600115
RGD:13792537
G AABR07032392.1 RGD:1600115
G AABR07034445.1 RGD:1600115
RGD:13792537
G AABR07040494.1 RGD:1600115
G AABR07040565.1 RGD:13792537
G AABR07041179.1 RGD:13792537
G AABR07045032.1 RGD:1600115
RGD:13792537
G AABR07052523.1 RGD:1600115
G AABR07053879.1 RGD:1600115
RGD:13792537
G AABR07066994.1 RGD:13792537
G AABR07067976.1 RGD:1600115
G AABR07068417.1 RGD:13792537
G AABR07070043.1 RGD:1600115
RGD:13792537
G AABR07071101.1 RGD:13792537
G AC094212.1 RGD:1600115
RGD:13792537
G AC107446.2 RGD:13792537
G AC110474.1 RGD:1600115
G AC110981.1 RGD:13792537
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:1600115
RGD:13792537
RGD:1624291
G Aldoart2 aldolase 1 A retrogene 2 JBrowse link 6 76,349,362 76,351,052 RGD:1600115
RGD:13792537
G Aldob aldolase, fructose-bisphosphate B JBrowse link 5 64,805,772 64,818,813 RGD:2302804
RGD:13792537
RGD:1600115
RGD:1624291
G Aldoc aldolase, fructose-bisphosphate C JBrowse link 10 65,586,504 65,590,093 RGD:1600115
RGD:13792537
G Bpgm bisphosphoglycerate mutase JBrowse link 4 61,912,210 61,940,697 RGD:1600115
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 JBrowse link 17 76,306,585 76,358,058 RGD:1600115
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:12792993
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302804
G Eno3 enolase 3 JBrowse link 10 57,278,271 57,283,661 RGD:1600115
G Eno4 enolase 4 JBrowse link 1 280,097,061 280,129,750 RGD:1624291
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:2302804
RGD:13792537
RGD:13792662
RGD:1600115
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 1 89,180,063 89,195,347 RGD:1303349
RGD:13792537
RGD:1624291
RGD:1600115
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:2302790
RGD:1600115
RGD:13792537
RGD:2302851
G Gpi glucose-6-phosphate isomerase JBrowse link 1 90,063,411 90,091,287 RGD:1600115
RGD:13792537
RGD:1624291
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:1358232
RGD:1600115
RGD:13792537
RGD:2302851
RGD:2302804
G Hk2 hexokinase 2 JBrowse link 4 113,559,396 113,609,897 RGD:13792537
RGD:1600115
G Hk3 hexokinase 3 JBrowse link 17 10,134,726 10,152,976 RGD:13792537
RGD:1600115
G LOC100362738 M2 pyruvate kinase-like JBrowse link 20 18,058,221 18,060,409 RGD:1600115
RGD:13792537
G LOC100911515 triosephosphate isomerase-like JBrowse link 9 20,213,596 20,217,279 RGD:1600115
G LOC103693780 2-oxoglutarate dehydrogenase, mitochondrial-like JBrowse link 14 86,599,906 86,614,963 RGD:1600115
G LOC108351137 glyceraldehyde-3-phosphate dehydrogenase JBrowse link 5 115,649,077 115,650,141 RGD:1600115
RGD:13792537
G LOC303448 similar to glyceraldehyde-3-phosphate dehydrogenase JBrowse link 10 78,687,653 78,696,097 RGD:13792537
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:1600115
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link 13 47,413,453 47,440,682 RGD:1624291
RGD:1600115
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:2301239
RGD:1624291
RGD:2302851
RGD:2302790
RGD:2302736
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1599363
RGD:1624291
RGD:2302736
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:2302736
RGD:2302804
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:1624291
G Pgam2 phosphoglycerate mutase 2 JBrowse link 14 86,045,005 86,047,116 RGD:1624291
G Pgk1 phosphoglycerate kinase 1 JBrowse link X 77,263,399 77,279,373 RGD:2302859
RGD:13792537
RGD:1600115
RGD:1624291
RGD:2302860
G Pgk2 phosphoglycerate kinase 2 JBrowse link 9 24,095,774 24,097,340 RGD:1624291
RGD:13792537
RGD:1600115
G Pklr pyruvate kinase L/R JBrowse link 2 188,449,158 188,458,034 RGD:2302790
RGD:13792537
RGD:1600115
RGD:2302851
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:2302790
RGD:13792537
RGD:1624291
RGD:12793012
RGD:1600115
RGD:2302804
G Pkm_v1 pyruvate kinase M1/2, variant 1 RGD:1600115
RGD:13792537
RGD:12793012
G Pkm_v2 pyruvate kinase M1/2, variant 2 RGD:1600115
RGD:13792537
RGD:12793012
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 JBrowse link 9 81,999,368 82,008,620 RGD:1624291
G RGD1560402 similar to Phosphoglycerate kinase 1 JBrowse link 2 42,726,747 42,728,100 RGD:1600115
RGD:13792537
G Tpi1 triosephosphate isomerase 1 JBrowse link 4 157,328,375 157,331,905 RGD:1599585
RGD:13792537
RGD:1600115
glycolytic process from galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galk1 galactokinase 1 JBrowse link 10 104,560,322 104,564,499 RGD:1624291
G Galt galactose-1-phosphate uridylyltransferase JBrowse link 5 58,144,679 58,147,946 RGD:1624291
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:1624291
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1600115
RGD:1624291
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:1600115
glycophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:13792537
G Stbd1 starch binding domain 1 JBrowse link 14 16,976,355 16,979,760 RGD:1624291
RGD:1600115
ketone body biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase JBrowse link 5 154,294,841 154,308,582 RGD:1599519
RGD:13792537
RGD:1624291
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 JBrowse link 8 83,069,837 83,204,778 RGD:1600115
RGD:13792537
RGD:1624291
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 JBrowse link 2 200,452,623 200,480,785 RGD:728598
RGD:2326121
G Slc27a5 solute carrier family 27 member 5 JBrowse link 1 65,576,599 65,587,192 RGD:1624291
RGD:13792537
ketone body catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link 1 47,972,399 47,992,654 RGD:2326095
G Oxct1 3-oxoacid CoA transferase 1 JBrowse link 2 53,859,738 54,007,733 RGD:1624291
G Oxct2b 3-oxoacid CoA transferase 2B JBrowse link 5 140,813,957 140,815,711 RGD:1600115
ketone body metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgat1 diacylglycerol O-acyltransferase 1 JBrowse link 7 117,566,363 117,576,735 RGD:10400846
malate-aspartate shuttle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100911440 mitochondrial glutamate carrier 1-like JBrowse link 1 213,973,482 213,979,016 RGD:13792537
G Slc1a3 solute carrier family 1 member 3 JBrowse link 2 57,860,881 57,935,363 RGD:1642939
G Slc25a12 solute carrier family 25 member 12 JBrowse link 3 57,881,951 57,998,214 RGD:1624291
RGD:13792537
RGD:13628741
G Slc25a13 solute carrier family 25 member 13 JBrowse link 4 31,134,165 31,757,006 RGD:1624291
RGD:13792537
G Slc25a18 solute carrier family 25 member 18 JBrowse link 4 153,330,069 153,350,447 RGD:13792537
G Slc25a22 solute carrier family 25 member 22 JBrowse link 1 214,410,388 214,418,236 RGD:13792537
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bid BH3 interacting domain death agonist JBrowse link 4 153,439,812 153,465,247 RGD:1624291
G Coq7 coenzyme Q7, hydroxylase JBrowse link 1 188,176,060 188,190,874 RGD:1624291
G Dguok deoxyguanosine kinase JBrowse link 4 115,180,433 115,208,061 RGD:15039296
G Mtch2 mitochondrial carrier 2 JBrowse link 3 79,678,141 79,695,356 RGD:1624291
G Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 JBrowse link 7 35,125,516 35,163,182 RGD:1624291
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 JBrowse link 5 56,567,109 56,576,676 RGD:1624291
RGD:13792537
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 JBrowse link 13 89,606,848 89,623,506 RGD:1624291
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 JBrowse link 1 219,254,293 219,259,328 RGD:1624291
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 JBrowse link 20 10,265,826 10,275,298 RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Taz tafazzin JBrowse link X 156,421,006 156,429,461 RGD:1624291
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC096404.1 RGD:13792537
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link 18 74,156,553 74,164,490 RGD:1624291
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:13792537
RGD:1624291
RGD:1600115
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link 17 72,209,321 72,231,562 RGD:1624291
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:1600115
RGD:1624291
G Atp5f1e ATP synthase F1 subunit epsilon JBrowse link 3 172,563,105 172,566,007 RGD:1624291
G Atp5me ATP synthase membrane subunit e JBrowse link 14 2,325,308 2,326,436 RGD:1600115
RGD:1624291
G Atp5mf ATP synthase membrane subunit f JBrowse link 12 11,191,799 11,198,369 RGD:1600115
RGD:1624291
G Atp5mg ATP synthase membrane subunit g JBrowse link 8 49,220,441 49,227,273 RGD:1624291
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link 2 208,566,385 208,577,147 RGD:1624291
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link 10 103,967,340 103,972,552 RGD:1624291
G Atp5pf ATP synthase peripheral stalk subunit F6 JBrowse link 11 24,286,806 24,294,419 RGD:1600115
RGD:1624291
G Atp5po ATP synthase peripheral stalk subunit OSCP JBrowse link 11 32,081,606 32,087,918 RGD:1624291
G Cox5b cytochrome c oxidase subunit 5B JBrowse link 9 43,259,706 43,262,039 RGD:13792537
G Cyc1 cytochrome c-1 JBrowse link 7 117,409,576 117,411,953 RGD:13792537
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:1600115
RGD:1624291
G Mt-atp8 mitochondrially encoded ATP synthase 8 JBrowse link MT 7,758 7,961 RGD:1624291
G Stoml2 stomatin like 2 JBrowse link 5 58,472,561 58,476,158 RGD:1624291
RGD:1600115
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07071968.1 RGD:13792537
G AC096404.1 RGD:13792537
G Afg1l AFG1 like ATPase JBrowse link 20 47,038,824 47,208,812 RGD:1624291
G Cox4i1 cytochrome c oxidase subunit 4i1 JBrowse link 19 54,245,958 54,252,198 RGD:13792537
G Cox4i2 cytochrome c oxidase subunit 4i2 JBrowse link 3 148,234,546 148,245,424 RGD:13792537
G Cox5a cytochrome c oxidase subunit 5A JBrowse link 8 62,298,358 62,309,765 RGD:13792537
G Cox5b cytochrome c oxidase subunit 5B JBrowse link 9 43,259,706 43,262,039 RGD:13792537
G Cox6a1 cytochrome c oxidase subunit 6A1 JBrowse link 12 47,024,442 47,027,495 RGD:13792537
G Cox6a2 cytochrome c oxidase subunit 6A2 JBrowse link 1 199,624,037 199,626,255 RGD:13792537
G Cox7c cytochrome c oxidase subunit 7C JBrowse link 2 14,699,878 14,701,903 RGD:13792537
G Cox8b cytochrome c oxidase, subunit VIIIb JBrowse link 1 213,648,787 213,650,247 RGD:727764
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:2300408
RGD:13792537
G Cyct cytochrome c, testis JBrowse link 3 63,204,779 63,211,847 RGD:13792537
G LOC100363502 cytochrome c, somatic-like JBrowse link 18 62,475,574 62,476,771 RGD:13792537
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:13792537
G Mt-co3 mitochondrially encoded cytochrome c oxidase III JBrowse link MT 8,599 9,382 RGD:13792537
G Proca1 protein interacting with cyclin A1 JBrowse link 10 65,454,451 65,469,491 RGD:1600115
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1358393
G Coq9 coenzyme Q9 JBrowse link 19 10,583,855 10,596,848 RGD:1624291
G Dld dihydrolipoamide dehydrogenase JBrowse link 6 50,597,677 50,618,694 RGD:1624291
G LOC100912599 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like JBrowse link 1 31,264,731 31,273,163 RGD:13792537
G LOC679739 NADH dehydrogenase (ubiquinone) Fe-S protein 6 JBrowse link 1 32,573,204 32,581,785 RGD:13792537
G Mt-nd2 mitochondrially encoded NADH dehydrogenase 2 JBrowse link MT 3,904 4,942 RGD:1600115
G Mt-nd4 mitochondrially encoded NADH dehydrogenase 4 JBrowse link MT 10,160 11,537 RGD:1600115
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 JBrowse link 9 99,617,051 99,651,827 RGD:1624291
RGD:13792537
G Ndufa10l1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 1 JBrowse link 6 62,796,951 62,798,384 RGD:13792537
G Ndufa7 NADH:ubiquinone oxidoreductase subunit A7 JBrowse link 7 18,683,553 18,696,332 RGD:13792537
G Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 JBrowse link 3 15,362,888 15,379,386 RGD:1600115
G Ndufaf1 NADH:ubiquinone oxidoreductase complex assembly factor 1 JBrowse link 3 111,458,227 111,469,239 RGD:13792537
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 JBrowse link 5 56,567,109 56,576,676 RGD:1600115
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 JBrowse link 1 264,298,671 264,303,712 RGD:1600115
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 JBrowse link 7 98,813,062 98,819,408 RGD:1600115
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 JBrowse link 1 162,369,801 162,376,024 RGD:1600115
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 JBrowse link 2 26,471,173 26,471,587 RGD:13792537
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 JBrowse link 1 219,141,289 219,144,610 RGD:13792537
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 JBrowse link 1 219,254,293 219,259,328 RGD:13792537
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:1624291
RGD:13792537
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:13792537
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 JBrowse link 1 226,543,671 226,572,414 RGD:1624291
RGD:13792537
RGD:1600115
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:13792537
G Sdhd succinate dehydrogenase complex subunit D JBrowse link 8 55,028,125 55,037,604 RGD:13792537
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07071968.1 RGD:13792537
G Cyc1 cytochrome c-1 JBrowse link 7 117,409,576 117,411,953 RGD:13792537
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:13792537
G Cyct cytochrome c, testis JBrowse link 3 63,204,779 63,211,847 RGD:13792537
G LOC100362172 LRRGT00112-like JBrowse link 17 22,655,291 22,678,983 RGD:13792537
G LOC100363502 cytochrome c, somatic-like JBrowse link 18 62,475,574 62,476,771 RGD:13792537
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor RGD:1600115
RGD:13792537
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1624291
RGD:1600115
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:1624291
RGD:1600115
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 JBrowse link 1 225,076,301 225,077,079 RGD:1624291
RGD:13792537
RGD:1600115
G Uqcr10 ubiquinol-cytochrome c reductase, complex III subunit X JBrowse link 14 84,935,480 84,937,741 RGD:13792537
G Uqcrb ubiquinol-cytochrome c reductase binding protein JBrowse link 7 71,264,501 71,269,869 RGD:13792537
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 JBrowse link 8 117,679,328 117,691,073 RGD:1624291
RGD:13792537
G Uqcrfs1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 JBrowse link 17 35,677,984 35,682,262 RGD:13792537
G Uqcrh ubiquinol-cytochrome c reductase hinge protein JBrowse link 5 134,919,040 134,927,235 RGD:1299349
RGD:13792537
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII JBrowse link 10 38,779,132 38,782,489 RGD:13792537
NADPH regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1624291
G Nnt nicotinamide nucleotide transhydrogenase JBrowse link 2 52,189,523 52,283,095 RGD:13513982
RGD:13792537
negative regulation of cellular respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:1624291
G Trap1 TNF receptor-associated protein 1 JBrowse link 10 11,724,032 11,757,682 RGD:1624291
RGD:1600115
negative regulation of electron transfer activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase JBrowse link 4 183,655,968 183,665,757 RGD:1624291
RGD:1600115
negative regulation of fermentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cavin3 caveolae associated protein 3 JBrowse link 1 170,317,099 170,318,688 RGD:1624291
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a12 solute carrier family 25 member 12 JBrowse link 3 57,881,951 57,998,214 RGD:13628741
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:1624291
RGD:1600115
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 JBrowse link 4 118,852,046 118,901,583 RGD:1625425
G Grb10 growth factor receptor bound protein 10 JBrowse link 14 92,021,851 92,122,249 RGD:8553640
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
RGD:13792537
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11529553
G Pask PAS domain containing serine/threonine kinase JBrowse link 9 100,450,595 100,479,719 RGD:1624291
RGD:13792537
negative regulation of glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adra1b adrenoceptor alpha 1B JBrowse link 10 29,392,762 29,450,644 RGD:1624291
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
negative regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 19 55,438,409 55,510,652 RGD:1624291
G Ddit4 DNA-damage-inducible transcript 4 JBrowse link 20 29,509,283 29,511,382 RGD:1624291
RGD:1600115
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:1600115
RGD:1624291
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:1624291
G Ier3 immediate early response 3 JBrowse link 20 3,438,798 3,440,002 RGD:1624291
G Mtch2 mitochondrial carrier 2 JBrowse link 3 79,678,141 79,695,356 RGD:1624291
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:9686132
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1600115
RGD:1624291
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
RGD:1600115
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:7242186
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:1624291
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:1624291
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
RGD:13792537
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) JBrowse link 10 90,296,144 90,312,401 RGD:1624291
RGD:1600115
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 JBrowse link 15 59,990,131 60,056,710 RGD:1624291
negative regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1599177
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
RGD:1624291
G Pde2a phosphodiesterase 2A JBrowse link 1 166,534,643 166,626,158 RGD:1624291
G Ppif peptidylprolyl isomerase F JBrowse link 16 1,979,191 1,985,912 RGD:1624291
RGD:1600115
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:14995471
negative regulation of pentose-phosphate shunt term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:5147997
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 JBrowse link 20 13,665,046 13,666,845 RGD:1624291
G Fxn frataxin JBrowse link 1 242,123,975 242,152,834 RGD:1600115
RGD:1624291
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:1624291
RGD:1600115
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:1624291
G Nipsnap2 nipsnap homolog 2 JBrowse link 12 30,527,540 30,566,090 RGD:1624291
G Surf1 SURF1, cytochrome c oxidase assembly factor JBrowse link 3 5,461,717 5,464,560 RGD:1624291
G Tefm transcription elongation factor, mitochondrial JBrowse link 10 67,476,006 67,478,830 RGD:1600115
RGD:1624291
pentose-phosphate shunt term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1599574
RGD:1624291
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) JBrowse link 5 166,994,683 167,030,441 RGD:1624291
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:1600115
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:1599574
RGD:1600115
G Pgls 6-phosphogluconolactonase JBrowse link 16 20,020,444 20,025,930 RGD:1624291
RGD:1600115
G Rpe ribulose-5-phosphate-3-epimerase JBrowse link 9 73,687,684 73,713,643 RGD:1599574
RGD:1624291
G Rpia ribose 5-phosphate isomerase A JBrowse link 4 98,568,028 98,593,664 RGD:1599574
G Taldo1 transaldolase 1 JBrowse link 1 214,375,555 214,385,886 RGD:1599574
G Tkt transketolase JBrowse link 16 6,609,670 6,634,608 RGD:1599574
pentose-phosphate shunt, non-oxidative branch term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpe ribulose-5-phosphate-3-epimerase JBrowse link 9 73,687,684 73,713,643 RGD:1641816
RGD:13792537
G Rpia ribose 5-phosphate isomerase A JBrowse link 4 98,568,028 98,593,664 RGD:1641816
RGD:13792537
G Shpk sedoheptulokinase JBrowse link 10 59,765,328 59,789,676 RGD:1624291
G Taldo1 transaldolase 1 JBrowse link 1 214,375,555 214,385,886 RGD:1641803
RGD:13792537
RGD:1641816
G Tkt transketolase JBrowse link 16 6,609,670 6,634,608 RGD:1580394
RGD:1641816
pentose-phosphate shunt, oxidative branch term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1641793
RGD:1624291
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) JBrowse link 5 166,994,683 167,030,441 RGD:1624291
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:1641793
RGD:13792537
RGD:1624291
G Pgls 6-phosphogluconolactonase JBrowse link 16 20,020,444 20,025,930 RGD:2311501
RGD:13792537
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coa6 cytochrome c oxidase assembly factor 6 JBrowse link 19 59,327,328 59,333,706 RGD:1624291
positive regulation of cellular respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 4 123,108,924 123,118,186 RGD:1624291
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:7349317
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:1624291
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204807
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7207891
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:1624291
G Prelid1 PRELI domain containing 1 JBrowse link 17 9,834,245 9,837,285 RGD:1624291
positive regulation of cytochrome-c oxidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:1578311
G Coa8 cytochrome c oxidase assembly factor 8 JBrowse link 6
6
136,185,772
136,279,476
136,210,936
136,304,317
RGD:1624291
RGD:1600115
G Cox17 cytochrome c oxidase copper chaperone COX17 JBrowse link 11 64,962,663 64,968,437 RGD:1624291
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1624291
RGD:1600115
G C1qtnf2 C1q and TNF related 2 JBrowse link 10 29,067,102 29,084,035 RGD:1624291
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 7 61,785,423 61,816,775 RGD:1624291
G Epm2aip1 EPM2A interacting protein 1 JBrowse link 8 119,524,039 119,531,387 RGD:1624291
RGD:13792537
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:12910990
RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:1600115
RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:1624291
RGD:1600115
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Irs1 insulin receptor substrate 1 JBrowse link 9 88,033,668 88,086,488 RGD:1624291
RGD:1600115
G Irs2 insulin receptor substrate 2 JBrowse link 16 83,824,515 83,848,569 RGD:1624291
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G JBrowse link 17 29,566,032 29,570,294 RGD:1624291
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:1624291
RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
positive regulation of glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adra1b adrenoceptor alpha 1B JBrowse link 10 29,392,762 29,450,644 RGD:1624291
G Avpr1a arginine vasopressin receptor 1A JBrowse link 7 67,341,366 67,345,290 RGD:1298691
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:1624291
positive regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 JBrowse link 6 108,087,677 108,123,811 RGD:1624291
RGD:1600115
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:12910990
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:2301905
G Gpd1 glycerol-3-phosphate dehydrogenase 1 JBrowse link 7 141,368,928 141,377,931 RGD:1624291
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:1624291
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642010
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7207891
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
RGD:1600115
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:8554193
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 5 124,568,845 124,642,569 RGD:8554193
G Prxl2c peroxiredoxin like 2C JBrowse link 17 1,798,224 1,830,011 RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
G Slc4a4 solute carrier family 4 member 4 JBrowse link 14 20,476,258 20,817,042 RGD:1624291
RGD:1600115
G Zbtb20 zinc finger and BTB domain containing 20 JBrowse link 11 62,014,925 62,561,113 RGD:1624291
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1624291
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:1624291
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Iscu iron-sulfur cluster assembly enzyme JBrowse link 12 48,621,454 48,627,297 RGD:1624291
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
positive regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gadd45gip1 GADD45G interacting protein 1 JBrowse link 19 25,946,979 25,949,528 RGD:1624291
G Lexm lymphocyte expansion molecule JBrowse link 5 126,196,071 126,221,916 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:10059611
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:9686132
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1600115
RGD:1624291
G Pgk1 phosphoglycerate kinase 1 JBrowse link X 77,263,399 77,279,373 RGD:13792537
G Pgk2 phosphoglycerate kinase 2 JBrowse link 9 24,095,774 24,097,340 RGD:13792537
G RGD1560402 similar to Phosphoglycerate kinase 1 JBrowse link 2 42,726,747 42,728,100 RGD:13792537
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
regulation of aerobic respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:1624291
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 19 55,438,409 55,510,652 RGD:1624291
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Ide insulin degrading enzyme JBrowse link 1 255,914,465 256,014,168 RGD:1624291
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
regulation of cellular respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cisd1 CDGSH iron sulfur domain 1 JBrowse link 20 18,493,538 18,506,923 RGD:1624291
G Noa1 nitric oxide associated 1 JBrowse link 14 33,107,868 33,124,172 RGD:1624291
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:1624291
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 14 113,530,470 113,561,645 RGD:1624291
G Prdm16 PR/SET domain 16 JBrowse link 5 171,662,277 171,711,561 RGD:1624291
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1580676
G Slc25a23 solute carrier family 25 member 23 JBrowse link 9 9,987,988 10,003,599 RGD:1624291
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:1624291
regulation of cytochrome-c oxidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:11341663
G Phb2 prohibitin 2 JBrowse link 4 157,230,769 157,235,375 RGD:1600115
RGD:1624291
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
regulation of generation of precursor metabolites and energy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx1-1 NK1 homeobox 1 JBrowse link 14 82,603,538 82,607,031 RGD:1624291
regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1624291
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1625611
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:2304267
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:2304267
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B JBrowse link 16 60,415,192 60,427,498 RGD:2304267
RGD:2306167
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:2306167
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D JBrowse link 3 173,950,613 173,953,684 RGD:2306167
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F JBrowse link X 15,774,091 15,784,711 RGD:1624291
regulation of glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:2304267
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:2304267
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B JBrowse link 16 60,415,192 60,427,498 RGD:2304267
RGD:1624291
RGD:2306167
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C JBrowse link 1 255,371,830 255,376,833 RGD:2306167
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D JBrowse link 3 173,950,613 173,953,684 RGD:2306167
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E JBrowse link 15 33,535,986 33,537,146 RGD:2306166
regulation of glycogen metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gcgr glucagon receptor JBrowse link 10 109,707,863 109,716,253 RGD:1624291
RGD:1600115
G Khk ketohexokinase JBrowse link 6 26,810,577 26,821,013 RGD:1624291
RGD:13792537
G Phlda2 pleckstrin homology-like domain, family A, member 2 JBrowse link 1 216,701,345 216,704,479 RGD:1624291
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:1624291
RGD:1600115
G Rubcnl rubicon like autophagy enhancer JBrowse link 15 57,065,512 57,109,197 RGD:1624291
regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 3 151,356,867 151,363,201 RGD:1600115
RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Il3 interleukin 3 JBrowse link 10 39,620,535 39,622,973 RGD:1624291
G Jmjd8 jumonji domain containing 8 JBrowse link 10 15,195,954 15,198,870 RGD:1600115
RGD:1624291
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:634534
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1600115
RGD:1624291
G Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 JBrowse link 17 70,632,778 70,713,736 RGD:729510
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:1624291
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 JBrowse link 4 6,559,153 6,799,888 RGD:1624291
G Slc2a6 solute carrier family 2 member 6 JBrowse link 3 5,567,729 5,575,144 RGD:1624291
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:1624291
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 7 11,429,266 11,446,119 RGD:1600115
RGD:1624291
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase JBrowse link 2 84,678,892 84,694,152 RGD:1600115
RGD:1624291
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 JBrowse link 12 24,668,398 24,669,464 RGD:1624291
regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1624291
RGD:1600115
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Cox7a1 cytochrome c oxidase subunit 7A1 JBrowse link 1 88,619,619 88,650,672 RGD:13792537
G Cox7a2 cytochrome c oxidase subunit 7A2 JBrowse link 8 87,209,529 87,213,627 RGD:13792537
G Cox7a2l cytochrome c oxidase subunit 7A2 like JBrowse link 6 6,695,807 6,709,790 RGD:1624291
RGD:13792537
G Cox7a2l2 cytochrome c oxidase subunit VIIa polypeptide 2-like 2 JBrowse link 14 52,661,933 52,662,375 RGD:13792537
G LOC687508 similar to Cytochrome c oxidase polypeptide VIIa-heart, mitochondrial precursor (Cytochrome c oxidase subunit VIIa-H) (COX VIIa-M) JBrowse link 1 91,070,593 91,096,190 RGD:13792537
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7240532
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
RGD:13792537
G Slc25a23 solute carrier family 25 member 23 JBrowse link 9 9,987,988 10,003,599 RGD:1624291
G Slc25a33 solute carrier family 25 member 33 JBrowse link 5 166,701,463 166,726,794 RGD:1624291
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
regulation of pentose-phosphate shunt term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 JBrowse link 13 111,946,626 111,996,536 RGD:1625062
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:1624291
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
RGD:13792537
regulation of pyruvate kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jmjd8 jumonji domain containing 8 JBrowse link 10 15,195,954 15,198,870 RGD:1600115
RGD:1624291
respiratory electron transport chain term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aifm2 apoptosis inducing factor, mitochondria associated 2 JBrowse link 20 31,329,047 31,353,548 RGD:1600115
G Coq7 coenzyme Q7, hydroxylase JBrowse link 1 188,176,060 188,190,874 RGD:1624291
G Etfdh electron transfer flavoprotein dehydrogenase JBrowse link 2 178,367,547 178,389,641 RGD:1600115
RGD:13792537
G Etfrf1 electron transfer flavoprotein regulatory factor 1 JBrowse link 4 179,476,996 179,482,398 RGD:1624291
G Immp2l inner mitochondrial membrane peptidase subunit 2 JBrowse link 6 60,958,351 61,859,457 RGD:1624291
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:13792537
G Mybbp1a MYB binding protein 1a JBrowse link 10 59,000,400 59,010,794 RGD:1624291
G Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 JBrowse link 4 51,590,413 51,598,771 RGD:1624291
RGD:13792537
G Ndufaf2 NADH:ubiquinone oxidoreductase complex assembly factor 2 JBrowse link 2 39,322,145 39,434,535 RGD:1624291
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 JBrowse link 2 26,471,173 26,471,587 RGD:1624291
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:13792537
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
G Polg2 DNA polymerase gamma 2, accessory subunit JBrowse link 10 94,968,836 94,979,259 RGD:1624291
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:1624291
RGD:1600115
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:2306906
RGD:1600115
RGD:1624291
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:2306906
RGD:13792537
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1624291
signal transduction involved in regulation of aerobic respiration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:1624291
tricarboxylic acid cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC141220.4 RGD:1600115
G Aco1 aconitase 1 JBrowse link 5 56,425,076 56,481,218 RGD:13792537
G Aco2 aconitase 2 JBrowse link 7 123,102,493 123,145,608 RGD:2306877
RGD:13792537
RGD:1600115
RGD:1624291
G Cs citrate synthase JBrowse link 7 2,752,680 2,778,963 RGD:2306828
RGD:13792537
RGD:1600115
RGD:2306877
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 JBrowse link 17 76,306,585 76,358,058 RGD:13792537
G Dlat dihydrolipoamide S-acetyltransferase JBrowse link 8 55,062,549 55,087,832 RGD:1600115
G Dlst dihydrolipoamide S-succinyltransferase JBrowse link 6 108,936,534 108,961,322 RGD:1359804
RGD:1600115
RGD:1624291
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:2306828
RGD:13792537
RGD:1600115
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 9 71,882,108 71,911,645 RGD:1600115
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 1 141,874,354 141,893,674 RGD:1600115
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha JBrowse link 8 59,164,601 59,183,899 RGD:2306828
RGD:13792537
RGD:1624291
RGD:1600115
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta JBrowse link 3 122,808,564 122,813,638 RGD:2306828
RGD:13792537
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma JBrowse link X 156,999,803 157,008,735 RGD:633073
RGD:13792537
RGD:1600115
RGD:2306828
G Ireb2 iron responsive element binding protein 2 JBrowse link 8 59,450,974 59,503,634 RGD:13792537
G LOC100125384 hypothetical protein LOC100125384 JBrowse link 1 105,935,449 105,936,919 RGD:13792537
G LOC103690168 probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial JBrowse link 1 106,404,925 106,410,154 RGD:13792537
G LOC103693780 2-oxoglutarate dehydrogenase, mitochondrial-like JBrowse link 14 86,599,906 86,614,963 RGD:13792537
G Mdh1 malate dehydrogenase 1 JBrowse link 14 106,378,349 106,393,642 RGD:13792537
G Mdh1b malate dehydrogenase 1B JBrowse link 9 70,403,612 70,450,204 RGD:13792537
G Mdh2 malate dehydrogenase 2 JBrowse link 12 23,941,451 23,954,406 RGD:2306828
RGD:13792537
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:2306877
RGD:13792537
G Ogdhl oxoglutarate dehydrogenase-like JBrowse link 16 8,497,495 8,523,552 RGD:13792537
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 JBrowse link X 37,329,779 37,343,410 RGD:1600115
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 JBrowse link 2 246,736,449 246,737,997 RGD:1600115
G Pdhb pyruvate dehydrogenase E1 subunit beta JBrowse link 15 18,540,826 18,546,855 RGD:1600115
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:1600115
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 JBrowse link 1 226,543,671 226,572,414 RGD:13792537
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:1600115
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:1600115
G Sdhd succinate dehydrogenase complex subunit D JBrowse link 8 55,028,125 55,037,604 RGD:1600115
RGD:13792537
RGD:1624291
G Sucla2 succinate-CoA ligase ADP-forming subunit beta JBrowse link 15 55,461,695 55,516,954 RGD:2306915
RGD:13792537
RGD:1600115
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha JBrowse link 4 101,181,315 101,210,692 RGD:2306915
RGD:13792537
RGD:1600115
G Suclg2 succinate-CoA ligase GDP-forming subunit beta JBrowse link 4 127,552,100 127,824,970 RGD:2306915
RGD:13792537
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  biological_process 19336
    cellular process 17241
      cellular metabolic process 10567
        generation of precursor metabolites and energy 489
          ATP generation from ADP + 117
          NADPH regeneration + 15
          electron transport chain + 148
          energy derivation by oxidation of organic compounds + 262
          energy derivation by oxidation of reduced inorganic compounds + 0
          ethanol oxidation 6
          glucose catabolic process to pyruvate utilizing ADP 0
          ketone body metabolic process + 10
          oxidative phosphorylation + 128
          pentose-phosphate shunt, non-oxidative branch 5
          photosynthesis, light harvesting + 0
          photosynthesis, light reaction + 0
          regulation of generation of precursor metabolites and energy + 140
          sulphoglycolysis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.