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ONTOLOGY REPORT - ANNOTATIONS


Term:5-methylcytosine catabolic process
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Accession:GO:0006211 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of 5-methylcytosine, a methylated base of DNA.
Synonyms:exact_synonym: 5-methylcytosine breakdown;   5-methylcytosine catabolism;   5-methylcytosine degradation


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5-methylcytosine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 IEA InterPro GO_REF:0000002 NCBI chr10:68,560,337...68,700,794
Ensembl chr10:68,560,337...68,694,487
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 IDA
IEA
(PMID:24315485) UniProtKB
UniProt
PMID:24315485 GO_REF:0000104 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000104 NCBI chr 2:73,982,036...74,135,394
Ensembl chr 2:73,986,404...74,108,176
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18651
    cellular process 17669
      cellular metabolic process 11268
        cellular catabolic process 2454
          aromatic compound catabolic process 651
            5-methylcytosine catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 18651
    cellular process 17669
      cellular metabolic process 11268
        cellular catabolic process 2454
          cellular nitrogen compound catabolic process 636
            pyrimidine-containing compound catabolic process 45
              5-methylcytosine catabolic process 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.