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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine nucleoside metabolic process
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Accession:GO:0006213 term browser browse the term
Definition:The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine nucleoside metabolism
 broad_synonym: pyrimidine metabolic process;   pyrimidine metabolism


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pyrimidine nucleoside metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:1624291
cytidine deamination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:1624291
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:1600115
G Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 JBrowse link 9 14,529,218 14,542,731 RGD:1600115
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1600115
G Cda cytidine deaminase JBrowse link 5 156,703,579 156,734,541 RGD:2316616
RGD:13792537
RGD:1624291
G Cdadc1 cytidine and dCMP deaminase domain containing 1 JBrowse link 15 39,865,094 39,894,122 RGD:1624291
G LOC100909857 cytidine deaminase-like JBrowse link 5 156,756,678 156,781,306 RGD:13792537
cytidine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:8553657
deoxycytidine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:2300395
RGD:2300398
RGD:2300399
G Tk2 thymidine kinase 2 JBrowse link 19 917,203 939,236 RGD:5134349
pyrimidine nucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upb1 beta-ureidopropionase 1 JBrowse link 20 14,167,383 14,193,724 RGD:1600115
RGD:1624291
thymidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1624291
RGD:1600115
thymidine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tk1 thymidine kinase 1 JBrowse link 10 106,817,556 106,828,888 RGD:2317232
RGD:13792537
G Tk2 thymidine kinase 2 JBrowse link 19 917,203 939,236 RGD:5134349
uridine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1624291
G Upp2 uridine phosphorylase 2 JBrowse link 3 44,806,106 44,846,464 RGD:1624291
uridine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      nitrogen compound metabolic process 10058
        organonitrogen compound metabolic process 6978
          nucleoside metabolic process 93
            pyrimidine nucleoside metabolic process 15
              blasticidin S metabolic process + 0
              pyrimidine deoxyribonucleoside metabolic process + 4
              pyrimidine nucleoside biosynthetic process + 0
              pyrimidine nucleoside catabolic process + 11
              pyrimidine nucleoside interconversion + 0
              pyrimidine ribonucleoside metabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      nitrogen compound metabolic process 10058
        cellular nitrogen compound metabolic process 6417
          nucleobase-containing compound metabolic process 5310
            nucleobase-containing small molecule metabolic process 577
              nucleoside metabolic process 93
                pyrimidine nucleoside metabolic process 15
                  blasticidin S metabolic process + 0
                  pyrimidine deoxyribonucleoside metabolic process + 4
                  pyrimidine nucleoside biosynthetic process + 0
                  pyrimidine nucleoside catabolic process + 11
                  pyrimidine nucleoside interconversion + 0
                  pyrimidine ribonucleoside metabolic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.