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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA replication
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Accession:GO:0006260 term browser browse the term
Definition:The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
Comment:DNA biosynthesis is only part of this process. See also the biological process terms 'DNA-dependent DNA replication ; GO:0006261' and 'RNA-dependent DNA replication ; GO:0006278'.
Synonyms:alt_id: GO:0055133
 xref: MIPS_funcat:10.01.03;   Wikipedia:DNA_replication


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DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AL117350.1 Protein SPHAR RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G ATR ATR serine/threonine kinase JBrowse link 3 142,449,235 142,578,793 RGD:2290271
G ATRIP ATR interacting protein JBrowse link 3 48,446,710 48,467,645 RGD:2290271
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2 214,725,645 214,809,683 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G CCDC88A coiled-coil domain containing 88A JBrowse link 2 55,287,817 55,419,856 RGD:2290271
G CDC45 cell division cycle 45 JBrowse link 22 19,479,294 19,520,612 RGD:2290271
G CDC6 cell division cycle 6 JBrowse link 17 40,287,878 40,304,657 RGD:2290271
G CDC7 cell division cycle 7 JBrowse link 1 91,498,968 91,525,764 RGD:2290271
G CDK1 cyclin dependent kinase 1 JBrowse link 10 60,778,331 60,794,852 RGD:2290271
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:2290271
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
G CHAF1A chromatin assembly factor 1 subunit A JBrowse link 19 4,402,596 4,448,322 RGD:2290271
G CHAF1B chromatin assembly factor 1 subunit B JBrowse link 21 36,380,145 36,419,015 RGD:2290271
G CHEK1 checkpoint kinase 1 JBrowse link 11 125,624,910 125,676,256 RGD:2290271
G CHTF18 chromosome transmission fidelity factor 18 JBrowse link 16 788,620 798,074 RGD:2290271
G CHTF8 chromosome transmission fidelity factor 8 JBrowse link 16 69,118,010 69,132,588 RGD:2290271
G CINP cyclin dependent kinase 2 interacting protein JBrowse link 14 102,348,282 102,362,916 RGD:2290271
G CLSPN claspin JBrowse link 1 35,720,213 35,769,985 RGD:2290271
G DBF4 DBF4 zinc finger JBrowse link 7 87,876,493 87,909,553 RGD:2290271
G DHX9 DExH-box helicase 9 JBrowse link 1 182,839,347 182,887,982 RGD:2290271
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G DNAJC2 DnaJ heat shock protein family (Hsp40) member C2 JBrowse link 7 103,312,289 103,344,873 RGD:2290271
G DONSON DNA replication fork stabilization factor DONSON JBrowse link 21 33,577,551 33,588,684 RGD:2290271
G DSCC1 DNA replication and sister chromatid cohesion 1 JBrowse link 8 119,833,960 119,855,920 RGD:2290271
G DTD1 D-aminoacyl-tRNA deacylase 1 JBrowse link 20 18,588,054 18,766,644 RGD:2290271
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 212,035,553 212,105,013 RGD:2290271
G DUT deoxyuridine triphosphatase JBrowse link 15 48,329,991 48,343,373 RGD:2290271
G E4F1 E4F transcription factor 1 JBrowse link 16 2,223,488 2,235,742 RGD:2290271
G EXO1 exonuclease 1 JBrowse link 1 241,847,967 241,889,939 RGD:2290271
G FAM111A family with sequence similarity 111 member A JBrowse link 11 59,142,856 59,155,039 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G GINS2 GINS complex subunit 2 JBrowse link 16 85,676,198 85,688,954 RGD:2290271
G GRWD1 glutamate rich WD repeat containing 1 JBrowse link 19 48,445,983 48,457,022 RGD:2290271
G HELB DNA helicase B JBrowse link 12 66,302,493 66,343,643 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G IGHMBP2 immunoglobulin mu DNA binding protein 2 JBrowse link 11 68,903,855 68,940,601 RGD:2290271
G ING4 inhibitor of growth family member 4 JBrowse link 12 6,650,301 6,663,143 RGD:2290271
G ING5 inhibitor of growth family member 5 JBrowse link 2 241,687,017 241,729,481 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G KAT7 lysine acetyltransferase 7 JBrowse link 17 49,788,681 49,835,026 RGD:2290271
G KCTD13 potassium channel tetramerization domain containing 13 JBrowse link 16 29,906,335 29,926,226 RGD:2290271
G KIN Kin17 DNA and RNA binding protein JBrowse link 10 7,750,962 7,787,993 RGD:2290271
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:2290271
G MCM10 minichromosome maintenance 10 replication initiation factor JBrowse link 10 13,161,558 13,211,110 RGD:2290271
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM5 minichromosome maintenance complex component 5 JBrowse link 22 35,400,133 35,454,942 RGD:2290271
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G MCM8 minichromosome maintenance 8 homologous recombination repair factor JBrowse link 20 5,950,652 6,000,941 RGD:2290271
G MCM9 minichromosome maintenance 9 homologous recombination repair factor JBrowse link 6 118,813,449 118,935,162 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G NAP1L1 nucleosome assembly protein 1 like 1 JBrowse link 12 76,036,585 76,084,687 RGD:2290271
G NASP nuclear autoantigenic sperm protein JBrowse link 1 45,583,988 45,618,906 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G NFIA nuclear factor I A JBrowse link 1 61,077,227 61,462,788 RGD:2290271
G NFIB nuclear factor I B JBrowse link 9 14,081,843 14,532,077 RGD:2290271
G NFIC nuclear factor I C JBrowse link 19 3,359,630 3,469,217 RGD:2290271
G NFIX nuclear factor I X JBrowse link 19 12,995,475 13,098,796 RGD:2290271
G NT5M 5',3'-nucleotidase, mitochondrial JBrowse link 17 17,303,373 17,347,663 RGD:2290271
G ORC1 origin recognition complex subunit 1 JBrowse link 1 52,372,829 52,404,471 RGD:2290271
G ORC2 origin recognition complex subunit 2 JBrowse link 2 200,908,977 200,963,701 RGD:2290271
G ORC3 origin recognition complex subunit 3 JBrowse link 6 87,590,067 87,677,824 RGD:2290271
G ORC4 origin recognition complex subunit 4 JBrowse link 2 147,930,396 148,021,604 RGD:2290271
G ORC5 origin recognition complex subunit 5 JBrowse link 7 104,126,341 104,208,047 RGD:2290271
G ORC6 origin recognition complex subunit 6 JBrowse link 16 46,689,656 46,698,394 RGD:2290271
G PCLAF PCNA clamp associated factor JBrowse link 15 64,364,304 64,387,687 RGD:2290271
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 15 64,815,632 64,827,173 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLA2 DNA polymerase alpha 2, accessory subunit JBrowse link 11 65,261,917 65,306,269 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLD2 DNA polymerase delta 2, accessory subunit JBrowse link 7 44,114,680 44,123,668 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 11 67,350,765 67,353,596 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLE2 DNA polymerase epsilon 2, accessory subunit JBrowse link 14 49,643,552 49,688,417 RGD:2290271
G POLE3 DNA polymerase epsilon 3, accessory subunit JBrowse link 9 113,407,235 113,410,749 RGD:2290271
G POLG DNA polymerase gamma, catalytic subunit JBrowse link 15 89,316,305 89,334,824 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G POLH DNA polymerase eta JBrowse link 6 43,576,147 43,620,523 RGD:2290271
G POLI DNA polymerase iota JBrowse link 18 54,269,479 54,321,266 RGD:2290271
G POLK DNA polymerase kappa JBrowse link 5 75,511,308 75,605,820 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
G PTMS parathymosin JBrowse link 12 6,766,363 6,770,952 RGD:2290271
G RAD1 RAD1 checkpoint DNA exonuclease JBrowse link 5 34,905,260 34,915,504 RGD:2290271
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 5 69,369,297 69,414,801 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD9A RAD9 checkpoint clamp component A JBrowse link 11 67,391,976 67,398,412 RGD:2290271
G RAD9B RAD9 checkpoint clamp component B JBrowse link 12 110,501,651 110,534,632 RGD:2290271
G RBBP4 RB binding protein 4, chromatin remodeling factor JBrowse link 1 32,651,208 32,686,211 RGD:2290271
G RBBP6 RB binding protein 6, ubiquitin ligase JBrowse link 16 24,539,566 24,572,863 RGD:2290271
G RBBP7 RB binding protein 7, chromatin remodeling factor JBrowse link X 16,844,341 16,870,362 RGD:2290271
G RBBP8 RB binding protein 8, endonuclease JBrowse link 18 22,914,121 23,026,486 RGD:2290271
G RBMS1 RNA binding motif single stranded interacting protein 1 JBrowse link 2 160,272,151 160,493,983 RGD:2290271
G RECQL4 RecQ like helicase 4 JBrowse link 8 144,511,288 144,517,833 RGD:2290271
G RECQL5 RecQ like helicase 5 JBrowse link 17 75,626,845 75,667,202 RGD:2290271
G REPIN1 replication initiator 1 JBrowse link 7 150,368,096 150,374,044 RGD:2290271
G REV1 REV1 DNA directed polymerase JBrowse link 2 99,400,477 99,490,123 RGD:2290271
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 JBrowse link 12 2,876,265 2,889,525 RGD:2290271
G RMI1 RecQ mediated genome instability 1 JBrowse link 9 83,980,359 84,004,074 RGD:2290271
G RMI2 RecQ mediated genome instability 2 JBrowse link 16 11,345,438 11,351,763 RGD:2290271
G RNASEH2A ribonuclease H2 subunit A JBrowse link 19 12,802,054 12,813,645 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G RRM1 ribonucleotide reductase catalytic subunit M1 JBrowse link 11 4,094,685 4,138,932 RGD:2290271
G RRM2 ribonucleotide reductase regulatory subunit M2 JBrowse link 2 10,122,568 10,211,010 RGD:2290271
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) JBrowse link 20 63,657,810 63,698,698 RGD:2290271
G SDE2 SDE2 telomere maintenance homolog JBrowse link 1 225,982,702 225,999,343 RGD:2290271
G SET SET nuclear proto-oncogene JBrowse link 9 128,683,424 128,696,396 RGD:2290271
G SIN3A SIN3 transcription regulator family member A JBrowse link 15 75,369,379 75,455,819 RGD:2290271
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 3,579,653 3,611,639 RGD:2290271
G SSBP1 single stranded DNA binding protein 1 JBrowse link 7 141,738,321 141,750,488 RGD:2290271
G SSRP1 structure specific recognition protein 1 JBrowse link 11 57,325,986 57,335,892 RGD:2290271
G STN1 STN1 subunit of CST complex JBrowse link 10 103,877,569 103,918,184 RGD:2290271
G STRA8 stimulated by retinoic acid 8 JBrowse link 7 135,231,408 135,258,663 RGD:2290271
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit JBrowse link 14 21,351,472 21,384,019 RGD:2290271
G TBRG1 transforming growth factor beta regulator 1 JBrowse link 11 124,622,846 124,635,926 RGD:2290271
G TICRR TOPBP1 interacting checkpoint and replication regulator JBrowse link 15 89,575,469 89,628,023 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:2290271
G TIPIN TIMELESS interacting protein JBrowse link 15 66,334,974 66,387,273 RGD:2290271
G TNFAIP1 TNF alpha induced protein 1 JBrowse link 17 28,335,671 28,347,009 RGD:2290271
G TOP1 DNA topoisomerase I JBrowse link 20 41,028,822 41,124,487 RGD:2290271
G TOP1MT DNA topoisomerase I mitochondrial JBrowse link 8 143,309,324 143,359,977 RGD:2290271
G TOP3A DNA topoisomerase III alpha JBrowse link 17 18,269,958 18,314,996 RGD:2290271
G TOPBP1 DNA topoisomerase II binding protein 1 JBrowse link 3 133,600,238 133,661,968 RGD:2290271
G TREX1 three prime repair exonuclease 1 JBrowse link 3 48,465,830 48,467,645 RGD:2290271
G TWNK twinkle mtDNA helicase JBrowse link 10 100,987,543 100,994,403 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZPR1 ZPR1 zinc finger JBrowse link 11 116,773,799 116,789,272 RGD:2290271
DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AL035461.4 novel protein RGD:2290271
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:2290271
G CCNE2 cyclin E2 JBrowse link 8 94,880,224 94,896,671 RGD:2290271
G CDC34 cell division cycle 34 JBrowse link 19 531,720 542,088 RGD:2290271
G CDC45 cell division cycle 45 JBrowse link 22 19,479,294 19,520,612 RGD:2290271
G CDC6 cell division cycle 6 JBrowse link 17 40,287,878 40,304,657 RGD:2290271
G GMNC geminin coiled-coil domain containing JBrowse link 3 190,843,271 190,864,200 RGD:2290271
G LRWD1 leucine rich repeats and WD repeat domain containing 1 JBrowse link 7 102,464,883 102,473,168 RGD:2290271
G MCM10 minichromosome maintenance 10 replication initiation factor JBrowse link 10 13,161,558 13,211,110 RGD:2290271
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM5 minichromosome maintenance complex component 5 JBrowse link 22 35,400,133 35,454,942 RGD:2290271
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G MCM9 minichromosome maintenance 9 homologous recombination repair factor JBrowse link 6 118,813,449 118,935,162 RGD:2290271
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 66,870,757 66,926,436 RGD:2290271
G ORC1 origin recognition complex subunit 1 JBrowse link 1 52,372,829 52,404,471 RGD:2290271
G ORC2 origin recognition complex subunit 2 JBrowse link 2 200,908,977 200,963,701 RGD:2290271
G ORC3 origin recognition complex subunit 3 JBrowse link 6 87,590,067 87,677,824 RGD:2290271
G ORC4 origin recognition complex subunit 4 JBrowse link 2 147,930,396 148,021,604 RGD:2290271
G ORC5 origin recognition complex subunit 5 JBrowse link 7 104,126,341 104,208,047 RGD:2290271
G ORC6 origin recognition complex subunit 6 JBrowse link 16 46,689,656 46,698,394 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLA2 DNA polymerase alpha 2, accessory subunit JBrowse link 11 65,261,917 65,306,269 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLE2 DNA polymerase epsilon 2, accessory subunit JBrowse link 14 49,643,552 49,688,417 RGD:2290271
G POLE3 DNA polymerase epsilon 3, accessory subunit JBrowse link 9 113,407,235 113,410,749 RGD:2290271
G POLE4 DNA polymerase epsilon 4, accessory subunit JBrowse link 2 74,958,643 74,970,128 RGD:2290271
G PRIM1 DNA primase subunit 1 JBrowse link 12 56,731,580 56,752,323 RGD:2290271
G PRIM2 DNA primase subunit 2 JBrowse link 6 57,314,805 57,646,852 RGD:2290271
G PURA purine rich element binding protein A JBrowse link 5 140,114,109 140,125,619 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G TOPBP1 DNA topoisomerase II binding protein 1 JBrowse link 3 133,600,238 133,661,968 RGD:2290271
DNA replication preinitiation complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
G GMNN geminin DNA replication inhibitor JBrowse link 6 24,774,937 24,786,099 RGD:2290271
DNA replication proofreading term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
DNA replication, Okazaki fragment processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
DNA replication, synthesis of RNA primer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC117378.1 novel protein RGD:2290271
G HELB DNA helicase B JBrowse link 12 66,302,493 66,343,643 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G PRIM1 DNA primase subunit 1 JBrowse link 12 56,731,580 56,752,323 RGD:2290271
G PRIM2 DNA primase subunit 2 JBrowse link 6 57,314,805 57,646,852 RGD:2290271
G PRIMPOL primase and DNA directed polymerase JBrowse link 4 184,649,672 184,694,952 RGD:2290271
DNA strand elongation involved in DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GINS1 GINS complex subunit 1 JBrowse link 20 25,407,470 25,448,568 RGD:2290271
G GINS2 GINS complex subunit 2 JBrowse link 16 85,676,198 85,688,954 RGD:2290271
G GINS3 GINS complex subunit 3 JBrowse link 16 58,392,471 58,406,147 RGD:2290271
G GINS4 GINS complex subunit 4 JBrowse link 8 41,529,205 41,545,030 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLD2 DNA polymerase delta 2, accessory subunit JBrowse link 7 44,114,680 44,123,668 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GINS1 GINS complex subunit 1 JBrowse link 20 25,407,470 25,448,568 RGD:2290271
DNA strand resection involved in replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 20 36,889,773 36,951,708 RGD:2290271
DNA unwinding involved in DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G HMGA1 high mobility group AT-hook 1 JBrowse link 6 34,236,873 34,246,231 RGD:2290271
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G PURA purine rich element binding protein A JBrowse link 5 140,114,109 140,125,619 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RECQL RecQ like helicase JBrowse link 12 21,468,910 21,501,669 RGD:2290271
G RECQL4 RecQ like helicase 4 JBrowse link 8 144,511,288 144,517,833 RGD:2290271
G RECQL5 RecQ like helicase 5 JBrowse link 17 75,626,845 75,667,202 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G SSBP1 single stranded DNA binding protein 1 JBrowse link 7 141,738,321 141,750,488 RGD:2290271
G TWNK twinkle mtDNA helicase JBrowse link 10 100,987,543 100,994,403 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
DNA-dependent DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP003419.1 novel protein RGD:2290271
G BAZ1A bromodomain adjacent to zinc finger domain 1A JBrowse link 14 34,752,731 34,875,360 RGD:2290271
G CDK2AP1 cyclin dependent kinase 2 associated protein 1 JBrowse link 12 123,260,970 123,272,240 RGD:2290271
G GINS4 GINS complex subunit 4 JBrowse link 8 41,529,205 41,545,030 RGD:2290271
G MCMBP minichromosome maintenance complex binding protein JBrowse link 10 119,829,404 119,873,628 RGD:2290271
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 49,861,204 49,867,576 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLD2 DNA polymerase delta 2, accessory subunit JBrowse link 7 44,114,680 44,123,668 RGD:2290271
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 11 67,350,765 67,353,596 RGD:2290271
G POLE2 DNA polymerase epsilon 2, accessory subunit JBrowse link 14 49,643,552 49,688,417 RGD:2290271
G POLG DNA polymerase gamma, catalytic subunit JBrowse link 15 89,316,305 89,334,824 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G POLN DNA polymerase nu JBrowse link 4 2,071,918 2,242,121 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit JBrowse link 6 111,299,031 111,483,715 RGD:2290271
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPAIN RPA interacting protein JBrowse link 17 5,419,641 5,433,020 RGD:2290271
G WDHD1 WD repeat and HMG-box DNA binding protein 1 JBrowse link 14 54,938,949 55,027,106 RGD:2290271
G WRNIP1 WRN helicase interacting protein 1 JBrowse link 6 2,765,341 2,786,952 RGD:2290271
lagging strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
leading strand elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLE3 DNA polymerase epsilon 3, accessory subunit JBrowse link 9 113,407,235 113,410,749 RGD:2290271
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MCM9 minichromosome maintenance 9 homologous recombination repair factor JBrowse link 6 118,813,449 118,935,162 RGD:2290271
mitochondrial DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 JBrowse link 16 4,425,805 4,456,775 RGD:2290271
G MGME1 mitochondrial genome maintenance exonuclease 1 JBrowse link 20 17,968,594 17,991,122 RGD:2290271
G POLG DNA polymerase gamma, catalytic subunit JBrowse link 15 89,316,305 89,334,824 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G PRIMPOL primase and DNA directed polymerase JBrowse link 4 184,649,672 184,694,952 RGD:2290271
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B JBrowse link 8 102,204,501 102,238,961 RGD:2290271
G SSBP1 single stranded DNA binding protein 1 JBrowse link 7 141,738,321 141,750,488 RGD:2290271
G TEFM transcription elongation factor, mitochondrial JBrowse link 17 30,898,983 30,907,629 RGD:2290271
G TWNK twinkle mtDNA helicase JBrowse link 10 100,987,543 100,994,403 RGD:2290271
mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
mitotic DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
mitotic DNA replication preinitiation complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDC45 cell division cycle 45 JBrowse link 22 19,479,294 19,520,612 RGD:2290271
mitotic DNA replication termination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTF2 replication termination factor 2 JBrowse link 20 56,468,585 56,518,886 RGD:2290271
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,480 32,399,672 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 20 63,657,810 63,696,253 RGD:2290271
negative regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FBXO5 F-box protein 5 JBrowse link 6 152,970,535 152,983,579 RGD:2290271
negative regulation of DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATR ATR serine/threonine kinase JBrowse link 3 142,449,235 142,578,793 RGD:2290271
G CDAN1 codanin 1 JBrowse link 15 42,723,544 42,737,133 RGD:2290271
G CDC6 cell division cycle 6 JBrowse link 17 40,287,878 40,304,657 RGD:2290271
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 JBrowse link 17 79,730,919 79,742,926 RGD:2290271
G GDF2 growth differentiation factor 2 JBrowse link 10 47,322,454 47,327,588 RGD:2290271
G GMNN geminin DNA replication inhibitor JBrowse link 6 24,774,937 24,786,099 RGD:2290271
G GTPBP4 GTP binding protein 4 JBrowse link 10 988,434 1,019,932 RGD:2290271
G HCRT hypocretin neuropeptide precursor JBrowse link 17 42,184,060 42,185,452 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G PDS5A PDS5 cohesin associated factor A JBrowse link 4 39,822,863 39,977,956 RGD:2290271
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 5 69,369,297 69,414,801 RGD:2290271
G S100A11 S100 calcium binding protein A11 JBrowse link 1 152,032,506 152,037,004 RGD:2290271
G SLFN11 schlafen family member 11 JBrowse link 17 35,350,305 35,373,914 RGD:2290271
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 73,008,856 73,048,123 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
G TSPYL2 TSPY like 2 JBrowse link X 53,082,367 53,088,540 RGD:2290271
G TTF1 transcription termination factor 1 JBrowse link 9 132,375,548 132,406,851 RGD:2290271
G WAPL WAPL cohesin release factor JBrowse link 10 86,435,256 86,521,816 RGD:2290271
negative regulation of DNA-dependent DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GMNN geminin DNA replication inhibitor JBrowse link 6 24,774,937 24,786,099 RGD:2290271
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATG7 autophagy related 7 JBrowse link 3 11,272,348 11,564,652 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
negative regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCL6 BCL6 transcription repressor JBrowse link 3 187,721,377 187,745,472 RGD:2290271
negative regulation of telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 73,008,856 73,048,123 RGD:2290271
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 69,355,567 69,386,007 RGD:2290271
nuclear DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATAD5 ATPase family AAA domain containing 5 JBrowse link 17 30,830,830 30,895,869 RGD:2290271
G DONSON DNA replication fork stabilization factor DONSON JBrowse link 21 33,577,551 33,588,684 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G ZNF830 zinc finger protein 830 JBrowse link 17 34,961,540 34,963,777 RGD:2290271
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
positive regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G E2F7 E2F transcription factor 7 JBrowse link 12 77,021,251 77,065,580 RGD:2290271
G E2F8 E2F transcription factor 8 JBrowse link 11 19,224,063 19,241,655 RGD:2290271
positive regulation of DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATAD5 ATPase family AAA domain containing 5 JBrowse link 17 30,830,830 30,895,869 RGD:2290271
G ATF1 activating transcription factor 1 JBrowse link 12 50,763,682 50,821,162 RGD:2290271
G BCAR3 BCAR3 adaptor protein, NSP family member JBrowse link 1 93,561,741 93,847,219 RGD:2290271
G CACYBP calcyclin binding protein JBrowse link 1 174,999,435 175,012,027 RGD:2290271
G CDC42 cell division cycle 42 JBrowse link 1 22,052,709 22,101,360 RGD:2290271
G CDK1 cyclin dependent kinase 1 JBrowse link 10 60,778,331 60,794,852 RGD:2290271
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
G CST3 cystatin C JBrowse link 20 23,626,706 23,637,955 RGD:2290271
G CTC1 CST telomere replication complex component 1 JBrowse link 17 8,224,815 8,248,079 RGD:2290271
G DHX9 DExH-box helicase 9 JBrowse link 1 182,839,347 182,887,982 RGD:2290271
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G EGF epidermal growth factor JBrowse link 4 109,912,883 110,013,766 RGD:2290271
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:2290271
G EREG epiregulin JBrowse link 4 74,365,145 74,388,749 RGD:2290271
G FAF1 Fas associated factor 1 JBrowse link 1 50,437,028 50,960,267 RGD:2290271
G GLI1 GLI family zinc finger 1 JBrowse link 12 57,459,785 57,472,451 RGD:2290271
G GLI2 GLI family zinc finger 2 JBrowse link 2 120,735,868 120,992,653 RGD:2290271
G HRAS HRas proto-oncogene, GTPase JBrowse link 11 532,242 535,576 RGD:2290271
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:2290271
G KCTD13 potassium channel tetramerization domain containing 13 JBrowse link 16 29,906,335 29,926,226 RGD:2290271
G MAP2K4 mitogen-activated protein kinase kinase 4 JBrowse link 17 12,020,822 12,143,828 RGD:2290271
G NPM2 nucleophosmin/nucleoplasmin 2 JBrowse link 8 22,023,308 22,036,908 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G RAC1 Rac family small GTPase 1 JBrowse link 7 6,374,527 6,403,967 RGD:2290271
G STN1 STN1 subunit of CST complex JBrowse link 10 103,877,569 103,918,184 RGD:2290271
G TNFAIP1 TNF alpha induced protein 1 JBrowse link 17 28,335,671 28,347,009 RGD:2290271
G UCN urocortin JBrowse link 2 27,307,400 27,308,445 RGD:2290271
positive regulation of DNA-dependent DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
positive regulation of DNA-dependent DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:2290271
G CIZ1 CDKN1A interacting zinc finger protein 1 JBrowse link 9 128,166,065 128,204,222 RGD:2290271
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHTF18 chromosome transmission fidelity factor 18 JBrowse link 16 788,620 798,074 RGD:2290271
G CHTF8 chromosome transmission fidelity factor 8 JBrowse link 16 69,118,010 69,132,588 RGD:2290271
G DSCC1 DNA replication and sister chromatid cohesion 1 JBrowse link 8 119,833,960 119,855,920 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STOML2 stomatin like 2 JBrowse link 9 35,099,776 35,103,195 RGD:2290271
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 8 38,411,138 38,468,834 RGD:2290271
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATRX ATRX chromatin remodeler JBrowse link X 77,504,878 77,786,235 RGD:2290271
G CDC7 cell division cycle 7 JBrowse link 1 91,498,968 91,525,764 RGD:2290271
G DBF4 DBF4 zinc finger JBrowse link 7 87,876,493 87,909,553 RGD:2290271
G DBF4B DBF4 zinc finger B JBrowse link 17 44,708,581 44,752,732 RGD:2290271
G INO80 INO80 complex ATPase subunit JBrowse link 15 40,978,880 41,117,778 RGD:2290271
G WIZ WIZ zinc finger JBrowse link 19 15,419,978 15,449,956 RGD:2290271
pre-replicative complex assembly involved in nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM5 minichromosome maintenance complex component 5 JBrowse link 22 35,400,133 35,454,942 RGD:2290271
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G ORC3 origin recognition complex subunit 3 JBrowse link 6 87,590,067 87,677,824 RGD:2290271
regulation of DNA endoreduplication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SENP2 SUMO specific peptidase 2 JBrowse link 3 185,586,295 185,633,551 RGD:2290271
regulation of DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVRL1 activin A receptor like type 1 JBrowse link 12 51,906,913 51,923,361 RGD:2290271
G ANKRD17 ankyrin repeat domain 17 JBrowse link 4 73,073,376 73,259,766 RGD:2290271
G CCDC88A coiled-coil domain containing 88A JBrowse link 2 55,287,817 55,419,856 RGD:2290271
G CCNA2 cyclin A2 JBrowse link 4 121,816,444 121,823,883 RGD:2290271
G DSCC1 DNA replication and sister chromatid cohesion 1 JBrowse link 8 119,833,960 119,855,920 RGD:2290271
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,879,759 31,897,698 RGD:2290271
G ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 JBrowse link 18 21,529,281 21,600,736 RGD:2290271
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 JBrowse link 8 27,771,949 27,812,430 RGD:2290271
G FBXO5 F-box protein 5 JBrowse link 6 152,970,535 152,983,579 RGD:2290271
G GMNN geminin DNA replication inhibitor JBrowse link 6 24,774,937 24,786,099 RGD:2290271
G ID3 inhibitor of DNA binding 3, HLH protein JBrowse link 1 23,557,926 23,559,501 RGD:2290271
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein JBrowse link 5 55,218,791 55,227,315 RGD:2290271
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 1 205,712,822 205,750,220 RGD:2290271
G OBI1 ORC ubiquitin ligase 1 JBrowse link 13 78,614,286 78,659,165 RGD:2290271
G ORC3 origin recognition complex subunit 3 JBrowse link 6 87,590,067 87,677,824 RGD:2290271
G ORC5 origin recognition complex subunit 5 JBrowse link 7 104,126,341 104,208,047 RGD:2290271
G PPP2CA protein phosphatase 2 catalytic subunit alpha JBrowse link 5 134,194,332 134,226,073 RGD:2290271
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 52,190,052 52,229,518 RGD:2290271
G RBBP6 RB binding protein 6, ubiquitin ligase JBrowse link 16 24,539,566 24,572,863 RGD:2290271
G SMC3 structural maintenance of chromosomes 3 JBrowse link 10 110,567,695 110,606,048 RGD:2290271
G USP37 ubiquitin specific peptidase 37 JBrowse link 2 218,450,251 218,568,393 RGD:2290271
G ZBTB38 zinc finger and BTB domain containing 38 JBrowse link 3 141,324,186 141,449,792 RGD:2290271
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZNF365 zinc finger protein 365 JBrowse link 10 62,374,157 62,672,011 RGD:2290271
regulation of DNA-dependent DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
regulation of DNA-dependent DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G TICRR TOPBP1 interacting checkpoint and replication regulator JBrowse link 15 89,575,469 89,628,023 RGD:2290271
G WDR18 WD repeat domain 18 JBrowse link 19 982,928 994,557 RGD:2290271
G WRNIP1 WRN helicase interacting protein 1 JBrowse link 6 2,765,341 2,786,952 RGD:2290271
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZMPSTE24 zinc metallopeptidase STE24 JBrowse link 1 40,258,078 40,294,180 RGD:2290271
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AICDA activation induced cytidine deaminase JBrowse link 12 8,602,170 8,612,970 RGD:2290271
G CDT1 chromatin licensing and DNA replication factor 1 JBrowse link 16 88,803,789 88,809,258 RGD:2290271
G DACH1 dachshund family transcription factor 1 JBrowse link 13 71,437,966 71,868,068 RGD:2290271
G NUGGC nuclear GTPase, germinal center associated JBrowse link 8 28,021,964 28,084,068 RGD:2290271
G TIPIN TIMELESS interacting protein JBrowse link 15 66,334,974 66,387,273 RGD:2290271
replication fork arrest term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MSH3 mutS homolog 3 JBrowse link 5 80,654,652 80,876,815 RGD:2290271
G SLFN11 schlafen family member 11 JBrowse link 17 35,350,305 35,373,914 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:2290271
G TIPIN TIMELESS interacting protein JBrowse link 15 66,334,974 66,387,273 RGD:2290271
replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALYREF Aly/REF export factor JBrowse link 17 81,887,835 81,891,587 RGD:2290271
G ATRX ATRX chromatin remodeler JBrowse link X 77,504,878 77,786,235 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 JBrowse link 4 13,568,738 13,627,725 RGD:2290271
G CDK9 cyclin dependent kinase 9 JBrowse link 9 127,786,034 127,790,792 RGD:2290271
G CENPS centromere protein S JBrowse link 1 10,430,433 10,442,808 RGD:2290271
G CENPS-CORT CENPS-CORT readthrough JBrowse link 1 10,430,433 10,452,153 RGD:2290271
G CENPX centromere protein X JBrowse link 17 82,018,703 82,022,930 RGD:2290271
G DDX11 DEAD/H-box helicase 11 JBrowse link 12 31,073,860 31,104,799 RGD:2290271
G EME1 essential meiotic structure-specific endonuclease 1 JBrowse link 17 50,373,220 50,381,479 RGD:2290271
G EME2 essential meiotic structure-specific endonuclease subunit 2 JBrowse link 16 1,773,222 1,776,714 RGD:2290271
G ETAA1 ETAA1 activator of ATR kinase JBrowse link 2 67,397,317 67,412,089 RGD:2290271
G EXD2 exonuclease 3'-5' domain containing 2 JBrowse link 14 69,191,477 69,244,020 RGD:2290271
G FANCM FA complementation group M JBrowse link 14 45,135,930 45,200,890 RGD:2290271
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,889,572 5,937,595 RGD:2290271
G GEN1 GEN1 Holliday junction 5' flap endonuclease JBrowse link 2 17,753,687 17,788,946 RGD:2290271
G MMS22L MMS22 like, DNA repair protein JBrowse link 6 97,142,161 97,283,437 RGD:2290271
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 1 205,712,822 205,750,220 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G PRIMPOL primase and DNA directed polymerase JBrowse link 4 184,649,672 184,694,952 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RFWD3 ring finger and WD repeat domain 3 JBrowse link 16 74,621,396 74,666,892 RGD:2290271
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 20 63,657,810 63,696,253 RGD:2290271
G SETMAR SET domain and mariner transposase fusion gene JBrowse link 3 4,303,304 4,320,649 RGD:2290271
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 JBrowse link 2 216,412,484 216,483,053 RGD:2290271
G THOC1 THO complex 1 JBrowse link 18 214,348 268,047 RGD:2290271
G TONSL tonsoku like, DNA repair protein JBrowse link 8 144,428,775 144,444,488 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G ZRANB3 zinc finger RANBP2-type containing 3 JBrowse link 2 135,164,218 135,531,218 RGD:2290271
replication fork protection term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,480 32,399,672 RGD:2290271
G DONSON DNA replication fork stabilization factor DONSON JBrowse link 21 33,577,551 33,588,684 RGD:2290271
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,889,572 5,937,595 RGD:2290271
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 JBrowse link 2 216,412,484 216,483,053 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:2290271
G TIPIN TIMELESS interacting protein JBrowse link 15 66,334,974 66,387,273 RGD:2290271
G ZNF830 zinc finger protein 830 JBrowse link 17 34,961,540 34,963,777 RGD:2290271
G ZRANB3 zinc finger RANBP2-type containing 3 JBrowse link 2 135,164,218 135,531,218 RGD:2290271
replication fork reversal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G FANCM FA complementation group M JBrowse link 14 45,135,930 45,200,890 RGD:2290271
signal transduction involved in intra-S DNA damage checkpoint term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
site-specific DNA replication termination at RTS1 barrier term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTF2 replication termination factor 2 JBrowse link 20 56,468,585 56,518,886 RGD:2290271
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLA2 DNA polymerase alpha 2, accessory subunit JBrowse link 11 65,261,917 65,306,269 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLD2 DNA polymerase delta 2, accessory subunit JBrowse link 7 44,114,680 44,123,668 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 11 67,350,765 67,353,596 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLE2 DNA polymerase epsilon 2, accessory subunit JBrowse link 14 49,643,552 49,688,417 RGD:2290271
G POLE3 DNA polymerase epsilon 3, accessory subunit JBrowse link 9 113,407,235 113,410,749 RGD:2290271
G POLE4 DNA polymerase epsilon 4, accessory subunit JBrowse link 2 74,958,643 74,970,128 RGD:2290271
G PRIM1 DNA primase subunit 1 JBrowse link 12 56,731,580 56,752,323 RGD:2290271
G PRIM2 DNA primase subunit 2 JBrowse link 6 57,314,805 57,646,852 RGD:2290271
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17988
    metabolic process 11592
      cellular metabolic process 10880
        cellular biosynthetic process 6168
          cellular macromolecule biosynthetic process 4994
            DNA replication 276
              DNA synthesis involved in DNA replication + 0
              DNA-dependent DNA replication + 153
              negative regulation of DNA replication + 34
              positive regulation of DNA replication + 39
              regulation of DNA replication + 110
              replication of extrachromosomal circular DNA + 0
Path 2
Term Annotations click to browse term
  biological_process 17988
    metabolic process 11592
      organic substance metabolic process 11012
        macromolecule metabolic process 9482
          macromolecule biosynthetic process 5148
            cellular macromolecule biosynthetic process 4994
              DNA replication 276
                DNA synthesis involved in DNA replication + 0
                DNA-dependent DNA replication + 153
                negative regulation of DNA replication + 34
                positive regulation of DNA replication + 39
                regulation of DNA replication + 110
                replication of extrachromosomal circular DNA + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.