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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA repair
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Accession:GO:0006281 term browser browse the term
Definition:The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Synonyms:xref: Wikipedia:DNA_repair


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DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit IEA UniProt GO_REF:0000043 NCBI chr 4:83,459,517...83,485,137
Ensembl chr 4:83,459,517...83,523,348
JBrowse link
G AC004223.3 RAD51L3-RFFL readthrough IEA InterPro GO_REF:0000002 Ensembl chr17:35,011,349...35,121,493 JBrowse link
G AC116366.2 novel protein IEA InterPro GO_REF:0000002 Ensembl chr 5:132,410,832...132,646,079 JBrowse link
G ACTL6A actin like 6A IEA UniProt GO_REF:0000043 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407
JBrowse link
G ACTR8 actin related protein 8 IEA UniProt GO_REF:0000043 NCBI chr 3:53,858,992...53,882,160
Ensembl chr 3:53,867,066...53,882,152
JBrowse link
G ADPRS ADP-ribosylserine hydrolase IMP (PMID:30045870) UniProt PMID:30045870 NCBI chr 1:36,088,885...36,093,932
Ensembl chr 1:36,088,892...36,093,932
JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase IDA (PMID:18603530), (PMID:19959401) UniProtKB PMID:18603530, PMID:19959401 NCBI chr14:77,672,404...77,708,038
Ensembl chr14:77,672,404...77,708,023
JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase IDA (PMID:16858410) UniProtKB PMID:16858410 NCBI chr11:43,880,831...43,920,274
Ensembl chr11:43,880,811...43,920,274
JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT IEA
ISO
(MGI:MGI:5800654|PMID:27010503) UniProt
UniProtKB
PMID:27010503 GO_REF:0000043, MGI:MGI:5800654 NCBI chr19:17,281,901...17,287,646
Ensembl chr19:17,281,645...17,287,646
JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 IEA
IDA
(PMID:9560228) InterPro
UniProt
UniProtKB
PMID:9560228 GO_REF:0000002, GO_REF:0000043 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772
JBrowse link
G APTX aprataxin IEA UniProt GO_REF:0000043 NCBI chr 9:32,883,872...33,025,120
Ensembl chr 9:32,886,601...33,025,130
JBrowse link
G ASF1A anti-silencing function 1A histone chaperone IDA (PMID:11897662) MGI PMID:11897662 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171
JBrowse link
G ATM ATM serine/threonine kinase IEA InterPro GO_REF:0000002 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
JBrowse link
G ATR ATR serine/threonine kinase TAS (PMID:8610130) PINC PMID:8610130 NCBI chr 3:142,449,235...142,578,793
Ensembl chr 3:142,449,007...142,578,733
JBrowse link
G ATRIP ATR interacting protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:48,446,737...48,467,645
Ensembl chr 3:48,446,710...48,467,645
JBrowse link
G ATRX ATRX chromatin remodeler IEA UniProt GO_REF:0000043 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BACH1 BTB domain and CNC homolog 1 IMP (PMID:11301010) CACAO PMID:11301010 NCBI chr21:29,298,922...29,361,894
Ensembl chr21:29,194,071...29,630,751
JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein IEA UniProt GO_REF:0000043 NCBI chr10:125,823,546...125,853,695
Ensembl chr10:125,823,546...125,853,695
JBrowse link
G BLM BLM RecQ like helicase NAS
IBA
IEA
(PMID:7585968)
(PMID:21873635)
UniProtKB
GO_Central
InterPro
PMID:7585968, PMID:21873635 GO_REF:0000002 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 IEA UniProt GO_REF:0000043 NCBI chr 4:13,568,738...13,627,725
Ensembl chr 4:13,568,738...13,627,725
JBrowse link
G BRCA1 BRCA1 DNA repair associated IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000043 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr  X:155,071,403...155,126,766
Ensembl chr  X:155,071,420...155,123,074
JBrowse link
G BTG2 BTG anti-proliferation factor 2 TAS (PMID:8944033) PINC PMID:8944033 NCBI chr 1:203,305,519...203,309,602
Ensembl chr 1:203,305,491...203,309,602
JBrowse link
G CDC14B cell division cycle 14B IEA UniProt GO_REF:0000043 NCBI chr 9:96,492,743...96,619,843
Ensembl chr 9:96,490,241...96,619,843
JBrowse link
G CDC5L cell division cycle 5 like IEA UniProt GO_REF:0000043 NCBI chr 6:44,387,706...44,450,425
Ensembl chr 6:44,387,706...44,450,425
JBrowse link
G CDK1 cyclin dependent kinase 1 TAS (PMID:21655336) UniProtKB PMID:21655336 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G CDK2 cyclin dependent kinase 2 IEA UniProt GO_REF:0000043 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789
JBrowse link
G CDK9 cyclin dependent kinase 9 IEA UniProt GO_REF:0000043 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792
JBrowse link
G CENPS centromere protein S IDA (PMID:20347429) UniProtKB PMID:20347429 NCBI chr 1:10,430,433...10,442,808
Ensembl chr 1:10,430,433...10,442,808
JBrowse link
G CENPS-CORT CENPS-CORT readthrough IDA
IEA
(PMID:20347429) UniProtKB
UniProt
PMID:20347429 GO_REF:0000043 NCBI chr 1:10,430,433...10,452,153
Ensembl chr 1:10,430,102...10,452,153
JBrowse link
G CENPX centromere protein X IEA UniProt GO_REF:0000043 NCBI chr17:82,018,703...82,022,930
Ensembl chr17:82,018,702...82,024,107
JBrowse link
G CEP164 centrosomal protein 164 IEA UniProt GO_REF:0000043 NCBI chr11:117,316,346...117,413,266
Ensembl chr11:117,314,557...117,413,266
JBrowse link
G CGAS cyclic GMP-AMP synthase IEA UniProt GO_REF:0000043 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297
JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A IEA UniProt GO_REF:0000043 NCBI chr19:4,402,596...4,448,322
Ensembl chr19:4,402,640...4,445,018
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B IEA UniProt GO_REF:0000043 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like IEA
TAS
(PMID:19661379) InterPro
UniProtKB
PMID:19661379 GO_REF:0000002 NCBI chr 1:147,172,747...147,295,762
Ensembl chr 1:147,242,654...147,295,765
JBrowse link
G CHEK1 checkpoint kinase 1 IEA
IMP
(PMID:19716789) Ensembl
UniProtKB
PMID:19716789 GO_REF:0000107 NCBI chr11:125,624,910...125,676,256
Ensembl chr11:125,625,665...125,676,255
JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit IMP (PMID:16332175) UniProtKB PMID:16332175 NCBI chr20:63,343,223...63,375,471
Ensembl chr20:63,343,223...63,378,401
JBrowse link
G CINP cyclin dependent kinase 2 interacting protein IEA UniProt GO_REF:0000043 NCBI chr14:102,348,282...102,362,890
Ensembl chr14:102,341,102...102,362,916
JBrowse link
G CLSPN claspin IEA UniProt GO_REF:0000043 NCBI chr 1:35,720,213...35,769,985
Ensembl chr 1:35,720,218...35,769,978
JBrowse link
G CSNK1E casein kinase 1 epsilon TAS (PMID:7797465) PINC PMID:7797465 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084
JBrowse link
G DDB1 damage specific DNA binding protein 1 TAS
IEA
(PMID:8798680) PINC
InterPro
PMID:8798680 GO_REF:0000002 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DDB2 damage specific DNA binding protein 2 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr11:47,214,969...47,239,218
Ensembl chr11:47,214,465...47,239,240
Ensembl chr11:47,214,465...47,239,240
JBrowse link
G DDX11 DEAD/H-box helicase 11 IEA UniProt GO_REF:0000043 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799
JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 IEA InterPro GO_REF:0000002 NCBI chr 1:44,213,471...44,220,673
Ensembl chr 1:44,213,455...44,220,681
JBrowse link
G DMC1 DNA meiotic recombinase 1 IEA InterPro GO_REF:0000002 NCBI chr22:38,509,154...38,570,286
Ensembl chr22:38,518,948...38,570,204
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 IEA UniProt GO_REF:0000043 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578
JBrowse link
G EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 IEA InterPro GO_REF:0000002 NCBI chr 7:36,153,252...36,301,538
Ensembl chr 7:36,153,254...36,301,538
JBrowse link
G EID3 EP300 interacting inhibitor of differentiation 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:104,303,739...104,305,205
Ensembl chr12:104,303,739...104,305,205
JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 IEA InterPro GO_REF:0000002 NCBI chr17:50,373,224...50,381,483
Ensembl chr17:50,373,220...50,381,483
JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 IEA InterPro GO_REF:0000002 NCBI chr16:1,773,222...1,776,714
Ensembl chr16:1,772,810...1,781,708
JBrowse link
G EMSY EMSY transcriptional repressor, BRCA2 interacting IEA UniProt GO_REF:0000043 NCBI chr11:76,444,928...76,553,031
Ensembl chr11:76,444,923...76,553,025
JBrowse link
G ENDOV endonuclease V IEA
ISS
InterPro
UniProtKB
GO_REF:0000002, GO_REF:0000024 NCBI chr17:80,415,117...80,438,086
Ensembl chr17:80,415,165...80,438,086
JBrowse link
G EPC2 enhancer of polycomb homolog 2 IEA UniProt GO_REF:0000043 NCBI chr 2:148,644,751...148,788,491
Ensembl chr 2:148,644,440...148,787,569
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit IMP
IEA
(PMID:25538220) MGI
UniProt
PMID:25538220 GO_REF:0000043 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,333...45,478,828
Ensembl chr19:45,407,333...45,478,828
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO (MGI:MGI:2179786|PMID:11950998) MGI PMID:11950998 MGI:MGI:2179786 NCBI chr19:45,349,837...45,370,647
Ensembl chr19:45,349,837...45,370,918
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit IMP (PMID:2167179) UniProtKB PMID:2167179 NCBI chr 2:127,257,290...127,294,166
Ensembl chr 2:127,257,290...127,294,166
Ensembl chr 2:127,257,290...127,294,166
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit IGI
IMP
(PMID:17055345)
(PMID:19596235)
BHF-UCL
UniProtKB
PMID:17055345, PMID:19596235 NCBI chr16:13,920,137...13,952,348
Ensembl chr16:13,920,154...13,952,348
Ensembl chr16:13,920,154...13,952,348
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease ISO (MGI:MGI:3041918|PMID:15082767) MGI PMID:15082767 MGI:MGI:3041918 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995
Ensembl chr13:102,845,831...102,875,995
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor IMP (PMID:26218421) UniProt PMID:26218421 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,470...49,539,538
JBrowse link
G ETAA1 ETAA1 activator of ATR kinase IEA UniProt GO_REF:0000043 NCBI chr 2:67,397,317...67,412,089
Ensembl chr 2:67,397,322...67,412,089
JBrowse link
G EXO1 exonuclease 1 TAS
IEA
(PMID:10364235) PINC
UniProt
PMID:10364235 GO_REF:0000043 NCBI chr 1:241,847,967...241,889,939
Ensembl chr 1:241,847,967...241,895,148
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA UniProt GO_REF:0000043 NCBI chr 8:71,197,433...71,548,104
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 IEA UniProt GO_REF:0000043 NCBI chr20:46,894,843...47,188,844
Ensembl chr20:46,894,624...47,188,844
JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 IEA UniProt GO_REF:0000043 NCBI chr 1:27,970,344...28,088,671
Ensembl chr 1:27,970,344...28,088,637
JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 IEA UniProt GO_REF:0000043 NCBI chr 6:133,240,340...133,532,128
Ensembl chr 6:133,240,598...133,532,128
JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 IMP (PMID:20603073) UniProtKB PMID:20603073 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108
JBrowse link
G FANCA FA complementation group A TAS (PMID:8896564) PINC PMID:8896564 NCBI chr16:89,737,549...89,816,647
Ensembl chr16:89,737,549...89,816,657
JBrowse link
G FANCC FA complementation group C TAS (PMID:1574115) PINC PMID:1574115 NCBI chr 9:95,099,054...95,317,730
Ensembl chr 9:95,099,054...95,426,796
JBrowse link
G FANCD2 FA complementation group D2 IEA InterPro GO_REF:0000002 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,414...10,101,932
Ensembl chr 3:10,026,414...10,101,932
JBrowse link
G FANCG FA complementation group G TAS (PMID:9256465) PINC PMID:9256465 NCBI chr 9:35,073,839...35,079,942
Ensembl chr 9:35,073,835...35,080,016
Ensembl chr 9:35,073,835...35,080,016
JBrowse link
G FANCI FA complementation group I IEA InterPro GO_REF:0000002 NCBI chr15:89,243,973...89,317,259
Ensembl chr15:89,243,945...89,317,261
Ensembl chr15:89,243,945...89,317,261
JBrowse link
G FANCL FA complementation group L IMP
IBA
(PMID:16916645)
(PMID:21873635)
UniProtKB
GO_Central
PMID:16916645, PMID:21873635 NCBI chr 2:58,159,243...58,241,681
Ensembl chr 2:58,159,243...58,241,372
JBrowse link
G FBH1 F-box DNA helicase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594
JBrowse link
G FBXO6 F-box protein 6 TAS (PMID:19716789) UniProtKB PMID:19716789 NCBI chr 1:11,664,200...11,674,354
Ensembl chr 1:11,664,200...11,674,354
JBrowse link
G FEN1 flap structure-specific endonuclease 1 TAS
IEA
(PMID:8007985) PINC
UniProt
PMID:8007985 GO_REF:0000043 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238
JBrowse link
G FH fumarate hydratase IEA UniProt GO_REF:0000043 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,603...241,519,761
Ensembl chr 1:241,497,603...241,519,761
JBrowse link
G FOXM1 forkhead box M1 IEA UniProt GO_REF:0000043 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,681...2,877,155
Ensembl chr12:2,857,681...2,877,155
JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 IEA UniProt GO_REF:0000043 NCBI chr19:3,506,263...3,538,334
Ensembl chr19:3,506,273...3,538,330
JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha TAS (PMID:7973727) PINC PMID:7973727 NCBI chr 1:67,685,201...67,688,334
Ensembl chr 1:67,685,201...67,688,334
JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:18,322,567...18,367,045
Ensembl chr11:18,322,295...18,367,045
JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 TAS (PMID:8194529) PINC PMID:8194529 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604
JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 TAS (PMID:9118947) PINC PMID:9118947 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106
JBrowse link
G H2AX H2A.X variant histone ISO (MGI:MGI:3053255|PMID:15364958)
(MGI:MGI:2179182|PMID:11934988)
MGI PMID:11934988, PMID:15364958 MGI:MGI:2179182, MGI:MGI:3053255 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G HDAC10 histone deacetylase 10 IEA UniProt GO_REF:0000043 NCBI chr22:50,245,183...50,251,265
Ensembl chr22:50,245,183...50,251,405
JBrowse link
G HDAC9 histone deacetylase 9 ISO (MGI:MGI:5139938|PMID:21746928) MGI PMID:21746928 MGI:MGI:5139938 NCBI chr 7:18,086,825...19,002,416
Ensembl chr 7:18,086,949...19,002,416
JBrowse link
G HELB DNA helicase B IEA UniProt GO_REF:0000043 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,545...66,347,645
Ensembl chr12:66,302,545...66,347,645
JBrowse link
G HINFP histone H4 transcription factor IMP (PMID:17974976) UniProtKB PMID:17974976 NCBI chr11:119,121,577...119,136,059
Ensembl chr11:119,121,580...119,136,059
JBrowse link
G HSF1 heat shock transcription factor 1 IEA UniProt GO_REF:0000043 NCBI chr 8:144,291,603...144,314,720
Ensembl chr 8:144,291,591...144,314,720
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A ISO (MGI:MGI:3027215|PMID:14701760) MGI PMID:14701760 MGI:MGI:3027215 NCBI chr 6:31,815,543...31,817,942
Ensembl chr 6:31,815,543...31,817,946
JBrowse link
G HUS1 HUS1 checkpoint clamp component TAS (PMID:9872989) PINC PMID:9872989 NCBI chr 7:47,962,980...47,979,619
Ensembl chr 7:47,963,288...47,979,615
JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 TAS (PMID:8493094) PINC PMID:8493094 NCBI chr11:68,903,855...68,940,601
Ensembl chr11:68,903,863...68,940,602
Ensembl chr11:68,903,863...68,940,602
Ensembl chr11:68,903,863...68,940,602
JBrowse link
G INIP INTS3 and NABP interacting protein IEA
IBA
IMP
(PMID:21873635)
(PMID:19605351)
InterPro
GO_Central
UniProtKB
PMID:19605351, PMID:21873635 GO_REF:0000002 NCBI chr 9:112,683,926...112,718,117
Ensembl chr 9:112,683,926...112,718,149
JBrowse link
G INO80 INO80 complex ATPase subunit IEA
IBA
(PMID:21873635) InterPro
UniProt
GO_Central
PMID:21873635 GO_REF:0000002, GO_REF:0000043 NCBI chr15:40,978,880...41,117,778
Ensembl chr15:40,978,880...41,116,280
JBrowse link
G INO80B INO80 complex subunit B IEA UniProt GO_REF:0000043 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944
JBrowse link
G INO80C INO80 complex subunit C IEA UniProt GO_REF:0000043 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979
Ensembl chr18:35,452,230...35,497,979
JBrowse link
G INO80D INO80 complex subunit D IEA UniProt GO_REF:0000043 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303
JBrowse link
G INO80E INO80 complex subunit E IEA UniProt GO_REF:0000043 NCBI chr16:29,995,690...30,005,791
Ensembl chr16:29,995,715...30,005,793
JBrowse link
G INTS3 integrator complex subunit 3 IMP (PMID:19605351), (PMID:19683501) UniProtKB PMID:19605351, PMID:19683501 NCBI chr 1:153,728,050...153,774,808
Ensembl chr 1:153,728,050...153,774,808
JBrowse link
G JMY junction mediating and regulatory protein, p53 cofactor IEA UniProt GO_REF:0000043 NCBI chr 5:79,236,131...79,327,215
Ensembl chr 5:79,236,131...79,327,211
JBrowse link
G KAT7 lysine acetyltransferase 7 IEA UniProt GO_REF:0000043 NCBI chr17:49,788,681...49,835,026
Ensembl chr17:49,788,648...49,835,026
Ensembl chr17:49,788,648...49,835,026
JBrowse link
G KIF22 kinesin family member 22 IEA InterPro GO_REF:0000002 NCBI chr16:29,790,734...29,805,543
Ensembl chr16:29,790,719...29,805,385
Ensembl chr16:29,790,719...29,805,385
JBrowse link
G KIN Kin17 DNA and RNA binding protein IEA UniProt GO_REF:0000043 NCBI chr10:7,750,962...7,787,993
Ensembl chr10:7,750,962...7,787,993
JBrowse link
G KMT5B lysine methyltransferase 5B IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr11:68,154,863...68,213,899
Ensembl chr11:68,154,863...68,213,828
JBrowse link
G KMT5C lysine methyltransferase 5C IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr19:55,339,876...55,348,121
Ensembl chr19:55,339,853...55,348,121
JBrowse link
G LIG1 DNA ligase 1 NOT IEA
ISO
TAS
(MGI:MGI:2178155|PMID:11896201)
(PMID:8696349)
InterPro
MGI
PINC
PMID:8696349, PMID:11896201 GO_REF:0000002, MGI:MGI:2178155 NCBI chr19:48,115,445...48,170,595
Ensembl chr19:48,115,445...48,170,603
JBrowse link
G LIG3 DNA ligase 3 IEA InterPro GO_REF:0000002 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G LIG4 DNA ligase 4 ISO (MGI:MGI:4943978|PMID:21390131)
(MGI:MGI:3037169|PMID:11779495)
MGI PMID:11779495, PMID:21390131 MGI:MGI:3037169, MGI:MGI:4943978 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase TAS (PMID:10097147) PINC PMID:10097147 NCBI chr 3:129,430,947...129,440,029
Ensembl chr 3:129,430,944...129,440,179
JBrowse link
G MCRS1 microspherule protein 1 IEA UniProt GO_REF:0000043 NCBI chr12:49,558,299...49,568,233
Ensembl chr12:49,556,544...49,568,145
JBrowse link
G MEN1 menin 1 NAS (PMID:12874027) UniProtKB PMID:12874027 NCBI chr11:64,803,514...64,811,294
Ensembl chr11:64,803,510...64,811,294
JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983
JBrowse link
G MLH1 mutL homolog 1 ISO (MGI:MGI:2677087|PMID:13679151)
(MGI:MGI:3513725|PMID:15480418)
MGI PMID:13679151, PMID:15480418 MGI:MGI:2677087, MGI:MGI:3513725 NCBI chr 3:36,993,487...37,050,846
Ensembl chr 3:36,993,350...37,050,846
Ensembl chr 3:36,993,350...37,050,846
JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component IMP
IEA
(PMID:22678362) UniProtKB
UniProt
PMID:22678362 GO_REF:0000104 NCBI chr10:97,458,324...97,498,794
Ensembl chr10:97,458,324...97,498,794
JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:60,734,735...60,969,965
Ensembl chr14:60,734,742...60,969,965
JBrowse link
G MORF4L2 mortality factor 4 like 2 IEA UniProt GO_REF:0000043 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease TAS (PMID:9705271), (PMID:9931460) PINC PMID:9705271, PMID:9931460 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G MRNIP MRN complex interacting protein IEA UniProt GO_REF:0000043 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173
JBrowse link
G MSH2 mutS homolog 2 IDA (PMID:8942985) BHF-UCL PMID:8942985 NCBI chr 2:47,403,067...47,634,501
Ensembl chr 2:47,403,067...47,663,146
Ensembl chr 2:47,403,067...47,663,146
JBrowse link
G MSH3 mutS homolog 3 IDA (PMID:8942985) BHF-UCL PMID:8942985 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815
JBrowse link
G MSH6 mutS homolog 6 IDA (PMID:8942985) BHF-UCL PMID:8942985 NCBI chr 2:47,783,145...47,806,954
Ensembl chr 2:47,695,530...47,810,101
Ensembl chr 2:47,695,530...47,810,101
JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit IMP (PMID:19596235) UniProtKB PMID:19596235 NCBI chr11:65,860,244...65,867,653
Ensembl chr11:65,857,126...65,867,653
JBrowse link
G MUTYH mutY DNA glycosylase IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G NABP1 nucleic acid binding protein 1 IMP (PMID:19683501) UniProtKB PMID:19683501 NCBI chr 2:191,678,136...191,686,943
Ensembl chr 2:191,678,068...191,696,664
Ensembl chr 2:191,678,068...191,696,664
JBrowse link
G NABP2 nucleic acid binding protein 2 ISS
IMP
(PMID:18449195), (PMID:19683501) BHF-UCL
UniProtKB
PMID:18449195, PMID:19683501 GO_REF:0000024 NCBI chr12:56,222,012...56,229,858
Ensembl chr12:56,222,015...56,229,854
JBrowse link
G NEIL1 nei like DNA glycosylase 1 ISO (MGI:MGI:2389521|PMID:12200441) MGI PMID:12200441 MGI:MGI:2389521 NCBI chr15:75,346,638...75,357,115
Ensembl chr15:75,346,955...75,357,115
JBrowse link
G NFRKB nuclear factor related to kappaB binding protein IEA UniProt GO_REF:0000043 NCBI chr11:129,863,636...129,895,596
Ensembl chr11:129,863,636...129,895,590
JBrowse link
G NONO non-POU domain containing octamer binding IEA UniProt GO_REF:0000043 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,283,192...71,301,168
JBrowse link
G NOP53 NOP53 ribosome biogenesis factor IMP (PMID:21741933) UniProtKB PMID:21741933 NCBI chr19:47,745,546...47,757,058
Ensembl chr19:47,745,546...47,757,058
JBrowse link
G NPM1 nucleophosmin 1 IDA (PMID:19188445) UniProtKB PMID:19188445 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,137
JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component IEA InterPro GO_REF:0000002 NCBI chr16:27,224,994...27,268,772
Ensembl chr16:27,224,994...27,268,772
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component IMP (PMID:27427983) UniProtKB PMID:27427983 NCBI chr15:29,264,989...29,269,822
Ensembl chr15:29,264,989...29,269,822
JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:121,957,088...121,975,228
Ensembl chr10:121,957,091...121,975,217
JBrowse link
G NUDT1 nudix hydrolase 1 IEA
IC
(PMID:10373420) InterPro
UniProtKB
PMID:10373420 GO_REF:0000002 NCBI chr 7:2,242,226...2,251,145
Ensembl chr 7:2,242,222...2,251,146
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase IEA InterPro GO_REF:0000002 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IEA UniProt GO_REF:0000043 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811
JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 IEA UniProt GO_REF:0000043 NCBI chr16:29,816,152...29,822,489
Ensembl chr16:29,816,152...29,822,489
JBrowse link
G PARK7 Parkinsonism associated deglycase IDA (PMID:28596309) UniProtKB PMID:28596309 NCBI chr 1:7,961,711...7,985,505
Ensembl chr 1:7,954,291...7,985,505
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 TAS (PMID:17396150) UniProtKB PMID:17396150 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,691...226,408,093
JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 TAS
IEA
(PMID:7260241) PINC
UniProt
PMID:7260241 GO_REF:0000043 NCBI chr14:20,343,041...20,357,904
Ensembl chr14:20,343,582...20,357,905
JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 TAS (PMID:7260241) PINC PMID:7260241 NCBI chr 3:51,942,290...51,948,867
Ensembl chr 3:51,942,345...51,948,867
JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 NAS (PMID:12101391) UniProtKB PMID:12101391 NCBI chr13:24,420,930...24,512,993
Ensembl chr13:24,420,931...24,512,778
JBrowse link
G PARPBP PARP1 binding protein IEA UniProt GO_REF:0000043 NCBI chr12:102,120,183...102,197,520
Ensembl chr12:102,120,185...102,197,520
JBrowse link
G PDS5A PDS5 cohesin associated factor A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:39,822,863...39,977,911
Ensembl chr 4:39,822,863...39,977,956
JBrowse link
G PDS5B PDS5 cohesin associated factor B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:32,586,432...32,778,019
Ensembl chr13:32,586,452...32,778,019
JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase IEA UniProtKB GO_REF:0000104 NCBI chr15:64,815,632...64,827,173
Ensembl chr15:64,815,632...64,825,668
JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component ISO (MGI:MGI:3513725|PMID:15480418) MGI PMID:15480418 MGI:MGI:3513725 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,106
JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase IGI
IBA
IEA
(PMID:10446192)
(PMID:21873635)
UniProt
GO_Central
InterPro
PMID:10446192, PMID:21873635 GO_REF:0000002 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351
JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT IDA
IMP
(PMID:3335506)
(PMID:11470886)
UniProtKB PMID:3335506, PMID:11470886 NCBI chr  X:24,693,877...24,996,986
Ensembl chr  X:24,693,909...24,996,986
JBrowse link
G POLB DNA polymerase beta IEA
TAS
(PMID:8168825) InterPro
UniProt
PINC
PMID:8168825 GO_REF:0000002, GO_REF:0000043 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit TAS (PMID:3146346) PINC PMID:3146346 NCBI chr19:50,384,291...50,418,018
Ensembl chr19:50,384,204...50,418,018
JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit IEA UniProt GO_REF:0000043 NCBI chr 7:44,114,680...44,123,668
Ensembl chr 7:44,114,681...44,124,358
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IEA InterPro GO_REF:0000002 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit TAS (PMID:9405441) PINC PMID:9405441 NCBI chr14:49,643,555...49,688,417
Ensembl chr14:49,643,555...49,688,422
JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit IEA InterPro GO_REF:0000002 NCBI chr17:64,477,785...64,497,054
Ensembl chr17:64,477,785...64,497,054
JBrowse link
G POLH DNA polymerase eta IEA
TAS
(PMID:10871396) InterPro
PINC
PMID:10871396 GO_REF:0000002 NCBI chr 6:43,576,147...43,620,523
Ensembl chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523
JBrowse link
G POLI DNA polymerase iota IEA
TAS
(PMID:10458907) InterPro
PINC
PMID:10458907 GO_REF:0000002 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,404...54,321,266
JBrowse link
G POLK DNA polymerase kappa IEA
IDA
TAS
(PMID:28297716)
(PMID:10620008)
InterPro
UniProtKB
PMID:10620008, PMID:28297716 GO_REF:0000002 NCBI chr 5:75,511,308...75,605,820
Ensembl chr 5:75,511,756...75,601,144
JBrowse link
G POLL DNA polymerase lambda IEA UniProt GO_REF:0000043 NCBI chr10:101,578,882...101,588,319
Ensembl chr10:101,578,882...101,588,270
JBrowse link
G POLM DNA polymerase mu IEA InterPro GO_REF:0000002 NCBI chr 7:44,072,062...44,082,530
Ensembl chr 7:44,072,062...44,082,530
JBrowse link
G POLQ DNA polymerase theta TAS (PMID:10395804) PINC PMID:10395804 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,427...121,546,641
JBrowse link
G PPP5C protein phosphatase 5 catalytic subunit IEA UniProt GO_REF:0000043 NCBI chr19:46,347,069...46,390,975
Ensembl chr19:46,347,087...46,392,981
JBrowse link
G PRPF19 pre-mRNA processing factor 19 IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000043 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585
JBrowse link
G PSME4 proteasome activator subunit 4 ISS
IEA
UniProtKB
UniProt
GO_REF:0000024, GO_REF:0000043 NCBI chr 2:53,864,069...53,970,993
Ensembl chr 2:53,864,069...53,970,993
JBrowse link
G PTTG1 PTTG1 regulator of sister chromatid separation, securin IEA UniProt GO_REF:0000043 NCBI chr 5:160,421,855...160,428,744
Ensembl chr 5:160,421,855...160,428,739
JBrowse link
G PWWP3A PWWP domain containing 3A, DNA repair factor IEA
IBA
IMP
(PMID:21873635)
(PMID:20347427)
InterPro
GO_Central
UniProtKB
PMID:20347427, PMID:21873635 GO_REF:0000002 NCBI chr19:1,354,959...1,378,429
Ensembl chr19:1,354,711...1,378,431
JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 5:34,905,260...34,915,504
Ensembl chr 5:34,905,260...34,918,989
JBrowse link
G RAD17 RAD17 checkpoint clamp loader component IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:69,369,293...69,414,801
Ensembl chr 5:69,369,293...69,414,801
JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase NAS (PMID:10884424) UniProtKB PMID:10884424 NCBI chr 3:8,877,075...8,969,249
Ensembl chr 3:8,775,402...8,963,773
JBrowse link
G RAD50 RAD50 double strand break repair protein IEA
IDA
(PMID:9705271) InterPro
UniProt
UniProtKB
PMID:9705271 GO_REF:0000002, GO_REF:0000043 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD51 RAD51 recombinase IEA
TAS
(PMID:8358431) InterPro
PINC
PMID:8358431 GO_REF:0000002 NCBI chr15:40,694,774...40,732,340
Ensembl chr15:40,694,774...40,732,340
JBrowse link
G RAD51AP1 RAD51 associated protein 1 NAS (PMID:9396801) UniProtKB PMID:9396801 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,048
JBrowse link
G RAD51B RAD51 paralog B TAS (PMID:9512535) PINC PMID:9512535 NCBI chr14:67,819,779...68,683,096
Ensembl chr14:67,819,779...68,730,218
JBrowse link
G RAD51C RAD51 paralog C IEA
IBA
IDA
(PMID:21873635)
(PMID:19451272)
InterPro
GO_Central
UniProtKB
PMID:19451272, PMID:21873635 GO_REF:0000002 NCBI chr17:58,692,140...58,735,611
Ensembl chr17:58,692,573...58,735,611
JBrowse link
G RAD51D RAD51 paralog D IEA
TAS
(PMID:9570954) InterPro
PINC
PMID:9570954 GO_REF:0000002 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,208...35,121,522
JBrowse link
G RAD52 RAD52 homolog, DNA repair protein IEA UniProt GO_REF:0000043 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
G RAD54L RAD54 like TAS (PMID:8805304) PINC PMID:8805304 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G RAD9A RAD9 checkpoint clamp component A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:67,391,976...67,398,412
Ensembl chr11:67,317,871...67,398,410
JBrowse link
G RAD9B RAD9 checkpoint clamp component B IEA
IBA
(PMID:21873635) InterPro
GO_Central
UniProtKB
PMID:21873635 GO_REF:0000002, GO_REF:0000104 NCBI chr12:110,501,651...110,534,632
Ensembl chr12:110,501,655...110,533,556
Ensembl chr12:110,501,655...110,533,556
JBrowse link
G RBBP8 RB binding protein 8, endonuclease TAS (PMID:10764811) PINC PMID:10764811 NCBI chr18:22,914,121...23,026,486
Ensembl chr18:22,798,261...23,026,488
JBrowse link
G RBM17 RNA binding motif protein 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:6,089,034...6,117,447
Ensembl chr10:6,089,034...6,117,457
JBrowse link
G RECQL RecQ like helicase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669
JBrowse link
G RECQL4 RecQ like helicase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845
JBrowse link
G RECQL5 RecQ like helicase 5 IMP
IBA
(PMID:22973052)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:22973052 NCBI chr17:75,626,845...75,667,202
Ensembl chr17:75,626,845...75,667,189
JBrowse link
G REV1 REV1 DNA directed polymerase IEA InterPro GO_REF:0000002 NCBI chr 2:99,400,477...99,490,123
Ensembl chr 2:99,400,475...99,490,035
JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit ISO (MGI:MGI:2176643|PMID:11884603) MGI PMID:11884603 MGI:MGI:2176643 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715
JBrowse link
G RFC2 replication factor C subunit 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:74,231,502...74,254,452
Ensembl chr 7:74,231,499...74,254,458
JBrowse link
G RFC3 replication factor C subunit 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:33,818,075...33,973,946
Ensembl chr13:33,818,069...33,966,558
JBrowse link
G RFC4 replication factor C subunit 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:186,789,900...186,806,482
Ensembl chr 3:186,789,880...186,807,058
JBrowse link
G RFC5 replication factor C subunit 5 NAS
IBA
(PMID:8999859)
(PMID:21873635)
UniProtKB
GO_Central
PMID:8999859, PMID:21873635 NCBI chr12:118,016,661...118,033,564
Ensembl chr12:118,013,588...118,033,130
JBrowse link
G RMI2 RecQ mediated genome instability 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:11,345,459...11,351,760
Ensembl chr16:11,249,619...11,381,662
JBrowse link
G RNF113A ring finger protein 113A IEA UniProt GO_REF:0000043 NCBI chr  X:119,870,475...119,871,733
Ensembl chr  X:119,870,475...119,871,733
JBrowse link
G RPA1 replication protein A1 IMP
IBA
(PMID:18469000)
(PMID:21873635)
CACAO
GO_Central
PMID:18469000, PMID:21873635 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G RPA2 replication protein A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746
JBrowse link
G RPA3 replication protein A3 IEA InterPro GO_REF:0000002 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607
JBrowse link
G RPA4 replication protein A4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467
JBrowse link
G RPAIN RPA interacting protein IPI (PMID:16135809) MGI PMID:16135809 NCBI chr17:5,420,167...5,432,879
Ensembl chr17:5,419,641...5,432,876
JBrowse link
G RPS3 ribosomal protein S3 IEA UniProt GO_REF:0000043 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280
JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B IEA Ensembl GO_REF:0000107 NCBI chr 8:102,204,501...102,238,961
Ensembl chr 8:102,204,502...102,238,961
Ensembl chr 8:102,204,502...102,238,961
JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 IEA UniProtKB GO_REF:0000104 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253
JBrowse link
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) IEA UniProtKB GO_REF:0000104 NCBI chr20:63,657,810...63,698,698
Ensembl chr20:63,659,300...63,698,684
JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 IEA UniProt GO_REF:0000043 NCBI chr 3:128,064,611...128,153,914
Ensembl chr 3:128,064,778...128,153,914
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 IEA UniProt GO_REF:0000043 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IEA UniProt GO_REF:0000043 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
JBrowse link
G SHLD1 shieldin complex subunit 1 IEA UniProt GO_REF:0000043 NCBI chr20:5,750,286...5,864,395
Ensembl chr20:5,750,393...5,864,395
JBrowse link
G SHLD2 shieldin complex subunit 2 IEA UniProt GO_REF:0000043 NCBI chr10:87,094,478...87,191,468
Ensembl chr10:87,094,161...87,191,468
JBrowse link
G SHLD3 shieldin complex subunit 3 IEA UniProt GO_REF:0000043 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928
JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase IEA UniProt GO_REF:0000043 NCBI chr 6:145,857,838...145,964,358
Ensembl chr 6:145,864,245...145,964,423
JBrowse link
G SIRT7 sirtuin 7 IEA UniProt GO_REF:0000043 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323
JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 IEA UniProt GO_REF:0000043 NCBI chr 5:94,613,476...94,714,918
Ensembl chr 5:94,618,669...94,739,436
JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 IEA UniProt GO_REF:0000043 NCBI chr10:100,909,416...100,965,134
Ensembl chr10:100,912,963...100,965,134
JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit IMP (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) UniProtKB PMID:19595721, PMID:19595722, PMID:19596235, PMID:19596236 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,887...30,197,561
Ensembl chr16:30,193,887...30,197,561
JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit IMP (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) UniProtKB PMID:19595721, PMID:19595722, PMID:19596235, PMID:19596236 NCBI chr16:29,454,501...29,458,219
Ensembl chr16:29,454,501...29,458,219
JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit IMP (PMID:19595722) UniProtKB PMID:19595722 NCBI chr16:3,579,653...3,611,639
Ensembl chr16:3,581,181...3,611,606
JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,414...216,483,053
JBrowse link
G SMC1A structural maintenance of chromosomes 1A IEA
TAS
(PMID:11877377) InterPro
UniProtKB
PMID:11877377 GO_REF:0000002 NCBI chr  X:53,374,149...53,422,728
Ensembl chr  X:53,374,149...53,422,728
JBrowse link
G SMC3 structural maintenance of chromosomes 3 IEA UniProt GO_REF:0000043 NCBI chr10:110,567,695...110,606,048
Ensembl chr10:110,567,691...110,604,636
Ensembl chr10:110,567,691...110,604,636
JBrowse link
G SMC6 structural maintenance of chromosomes 6 IEA UniProt GO_REF:0000043 NCBI chr 2:17,663,812...17,753,833
Ensembl chr 2:17,663,812...17,800,242
JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase IEA UniProt GO_REF:0000043 NCBI chr16:18,804,858...18,926,428
Ensembl chr16:18,804,853...18,926,454
Ensembl chr16:18,804,853...18,926,454
JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ISO RGD PMID:12718542 RGD:2317001 NCBI chr12:54,121,274...54,188,985
Ensembl chr12:54,121,277...54,189,008
JBrowse link
G SSRP1 structure specific recognition protein 1 IEA UniProt GO_REF:0000043 NCBI chr11:57,325,986...57,335,892
Ensembl chr11:57,325,986...57,335,892
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 IEA UniProt GO_REF:0000043 NCBI chr16:680,410...682,801
Ensembl chr16:680,224...682,870
JBrowse link
G SUMO1 small ubiquitin like modifier 1 TAS (PMID:8812453) PINC PMID:8812453 NCBI chr 2:202,206,171...202,238,597
Ensembl chr 2:202,206,180...202,238,608
Ensembl chr 2:202,206,180...202,238,608
JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit IEA UniProt GO_REF:0000043, GO_REF:0000104 NCBI chr14:21,351,472...21,384,019
Ensembl chr14:21,351,476...21,384,019
JBrowse link
G SWI5 SWI5 homologous recombination repair protein IEA UniProt GO_REF:0000043 NCBI chr 9:128,275,356...128,288,989
Ensembl chr 9:128,275,379...128,316,123
JBrowse link
G TAOK1 TAO kinase 1 IEA UniProt GO_REF:0000043 NCBI chr17:29,390,363...29,551,903
Ensembl chr17:29,390,464...29,551,904
JBrowse link
G TAOK3 TAO kinase 3 IEA UniProt GO_REF:0000043 NCBI chr12:118,149,801...118,372,950
Ensembl chr12:118,149,801...118,372,907
JBrowse link
G TDG thymine DNA glycosylase IEA InterPro GO_REF:0000002 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 IEA
IDA
(PMID:17948061) InterPro
UniProt
UniProtKB
PMID:17948061 GO_REF:0000002, GO_REF:0000043 NCBI chr14:89,954,923...90,044,768
Ensembl chr14:89,954,939...90,044,764
JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated IEA UniProt GO_REF:0000043 NCBI chr 8:30,831,544...30,913,008
Ensembl chr 8:30,831,544...30,913,008
Ensembl chr 8:30,831,544...30,913,008
JBrowse link
G TFPT TCF3 fusion partner IEA UniProt GO_REF:0000043 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,013...54,115,675
JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator ISS UniProtKB GO_REF:0000024 NCBI chr15:89,575,469...89,628,023
Ensembl chr15:89,575,469...89,631,056
JBrowse link
G TIMELESS timeless circadian regulator IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 NAS (PMID:12773567) UniProtKB PMID:12773567 NCBI chr 3:133,600,238...133,661,968
Ensembl chr 3:133,598,175...133,662,380
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO (MGI:MGI:3053255|PMID:15364958) MGI PMID:15364958 MGI:MGI:3053255 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728
JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough TAS (PMID:7797465) PINC PMID:7797465 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522
JBrowse link
G TREX1 three prime repair exonuclease 1 TAS (PMID:10393201) PINC PMID:10393201 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
G TREX2 three prime repair exonuclease 2 IEA UniProt GO_REF:0000043 NCBI chr  X:153,444,720...153,446,487
Ensembl chr  X:153,444,720...153,470,587
JBrowse link
G TRIM28 tripartite motif containing 28 IDA (PMID:17178852) UniProtKB PMID:17178852 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 IEA UniProt GO_REF:0000043 NCBI chr 2:229,763,837...229,923,234
Ensembl chr 2:229,763,837...229,923,239
Ensembl chr 2:229,763,837...229,923,239
JBrowse link
G TRRAP transformation/transcription domain associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831
JBrowse link
G TTC5 tetratricopeptide repeat domain 5 IEA UniProt GO_REF:0000043 NCBI chr14:20,286,227...20,305,951
Ensembl chr14:20,256,558...20,305,960
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A IGI
IBA
(PMID:1717990)
(PMID:21873635)
UniProtKB
GO_Central
PMID:1717990, PMID:21873635 NCBI chr  X:119,574,563...119,584,423
Ensembl chr  X:119,574,536...119,591,083
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IGI
IBA
(PMID:1717990)
(PMID:21873635)
UniProtKB
GO_Central
PMID:1717990, PMID:21873635 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,469...134,392,108
JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 IEA UniProt GO_REF:0000043 NCBI chr 4:102,794,383...102,868,895
Ensembl chr 4:102,794,383...102,868,896
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IMP (PMID:16916645) UniProtKB PMID:16916645 NCBI chr 1:202,331,657...202,341,936
Ensembl chr 1:202,331,657...202,341,980
JBrowse link
G UBE2U ubiquitin conjugating enzyme E2 U IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:64,202,802...64,267,381
Ensembl chr 1:64,203,627...64,267,368
JBrowse link
G UBE2W ubiquitin conjugating enzyme E2 W IEA UniProt GO_REF:0000043 NCBI chr 8:73,780,096...73,878,862
Ensembl chr 8:73,780,097...73,878,910
JBrowse link
G UBQLN4 ubiquilin 4 IEA UniProt GO_REF:0000043 NCBI chr 1:156,033,129...156,053,798
Ensembl chr 1:156,035,299...156,053,798
JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 IEA UniProt GO_REF:0000043 NCBI chr 8:102,252,273...102,412,700
Ensembl chr 8:102,252,273...102,412,759
JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 IEA UniProt GO_REF:0000043 NCBI chr 1:193,012,254...193,060,140
Ensembl chr 1:193,012,250...193,060,080
JBrowse link
G UFL1 UFM1 specific ligase 1 IEA UniProt GO_REF:0000043 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276
JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 IEA UniProt GO_REF:0000043 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154
JBrowse link
G UNG uracil DNA glycosylase TAS (PMID:1923798) PINC PMID:1923798 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase IDA (PMID:16488880) HGNC PMID:16488880 NCBI chr19:18,831,405...18,868,230
Ensembl chr19:18,831,938...18,868,236
Ensembl chr19:18,831,938...18,868,236
JBrowse link
G USP28 ubiquitin specific peptidase 28 IEA UniProt GO_REF:0000043 NCBI chr11:113,797,875...113,875,572
Ensembl chr11:113,797,874...113,875,570
JBrowse link
G USP3 ubiquitin specific peptidase 3 IMP (PMID:17980597) UniProtKB PMID:17980597 NCBI chr15:63,504,593...63,594,633
Ensembl chr15:63,504,511...63,594,640
JBrowse link
G USP45 ubiquitin specific peptidase 45 IMP (PMID:25538220) MGI PMID:25538220 NCBI chr 6:99,432,325...99,515,770
Ensembl chr 6:99,432,325...99,521,728
Ensembl chr 6:99,432,325...99,521,728
JBrowse link
G USP51 ubiquitin specific peptidase 51 IEA UniProt GO_REF:0000043 NCBI chr  X:55,484,524...55,489,875
Ensembl chr  X:55,484,616...55,489,202
JBrowse link
G UVRAG UV radiation resistance associated IMP (PMID:22542840) UniProtKB PMID:22542840 NCBI chr11:75,815,189...76,144,232
Ensembl chr11:75,815,210...76,144,232
JBrowse link
G VCP valosin containing protein NAS (PMID:16140914) UniProtKB PMID:16140914 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,056,064...35,072,627
JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:54,938,949...55,027,106
Ensembl chr14:54,938,949...55,027,105
JBrowse link
G WRAP53 WD repeat containing antisense to TP53 IEA UniProt GO_REF:0000043 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502
JBrowse link
G WRN WRN RecQ like helicase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G XPA XPA, DNA damage recognition and repair factor IDA
IMP
(PMID:1601884) CAFA PMID:1601884 NCBI chr 9:97,654,398...97,697,403
Ensembl chr 9:97,674,909...97,697,357
Ensembl chr 9:97,674,909...97,697,357
JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor TAS (PMID:1522891) PINC PMID:1522891 NCBI chr 3:14,145,145...14,178,601
Ensembl chr 3:14,145,147...14,178,783
Ensembl chr 3:14,145,147...14,178,783
JBrowse link
G XRCC1 X-ray repair cross complementing 1 ISO (MGI:MGI:4359093|PMID:19633665) MGI PMID:19633665 MGI:MGI:4359093 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,040...43,580,473
Ensembl chr19:43,543,040...43,580,473
JBrowse link
G XRCC2 X-ray repair cross complementing 2 IGI (PMID:10422536) BHF-UCL PMID:10422536 NCBI chr 7:152,644,776...152,676,141
Ensembl chr 7:152,644,776...152,676,141
JBrowse link
G XRCC3 X-ray repair cross complementing 3 IGI
IEA
(PMID:10422536) BHF-UCL
InterPro
PMID:10422536 GO_REF:0000002 NCBI chr14:103,697,611...103,715,486
Ensembl chr14:103,697,609...103,715,504
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 IMP (PMID:24657165) UniProtKB PMID:24657165 NCBI chr14:64,504,726...64,533,693
Ensembl chr14:64,503,712...64,533,690
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 IEA Ensembl GO_REF:0000107 NCBI chr 1:40,258,078...40,294,180
Ensembl chr 1:40,258,041...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 IDA
IBA
(PMID:22759634)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:22759634 NCBI chr 2:135,164,218...135,531,218
Ensembl chr 2:135,136,916...135,531,218
JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL451136.1 novel protein IEA InterPro GO_REF:0000002 Ensembl chr 1:45,329,262...45,491,155 JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 TAS
IBA
IDA
(PMID:21873635)
(PMID:8932386)
Reactome
GO_Central
CAFA
PMID:8932386, PMID:21873635 Reactome:R-HSA-73884 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772
JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:55,000,363...55,009,057
Ensembl chr  X:55,000,363...55,009,057
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 IDA (PMID:18995831) UniProtKB PMID:18995831 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor IMP (PMID:9973627) UniProtKB PMID:9973627 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,470...49,539,538
JBrowse link
G FEN1 flap structure-specific endonuclease 1 IEA UniProtKB GO_REF:0000104 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238
JBrowse link
G HMGA1 high mobility group AT-hook 1 IDA
IBA
(PMID:19465398)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19465398, PMID:21873635 NCBI chr 6:34,236,873...34,246,231
Ensembl chr 6:34,236,873...34,246,231
JBrowse link
G HMGA2 high mobility group AT-hook 2 IDA
IBA
(PMID:19465398)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19465398, PMID:21873635 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HMGB1 high mobility group box 1 IEA Ensembl GO_REF:0000107 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IMP
IBA
(PMID:19713937)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19713937, PMID:21873635 NCBI chr  X:53,532,096...53,686,723
Ensembl chr  X:53,532,096...53,686,728
JBrowse link
G L34079.1 novel protein IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr19:43,554,692...43,593,036 JBrowse link
G LIG1 DNA ligase 1 IDA (PMID:19589734) BHF-UCL PMID:19589734 NCBI chr19:48,115,445...48,170,595
Ensembl chr19:48,115,445...48,170,603
JBrowse link
G MPG N-methylpurine DNA glycosylase IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,853
Ensembl chr16:77,007...85,853
JBrowse link
G MUTYH mutY DNA glycosylase IEA
IBA
(PMID:21873635) InterPro
GO_Central
UniProt
PMID:21873635 GO_REF:0000002, GO_REF:0000104 NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G NEIL1 nei like DNA glycosylase 1 IEA
IBA
IDA
(PMID:21873635)
(PMID:17611195)
InterPro
GO_Central
UniProtKB
PMID:17611195, PMID:21873635 GO_REF:0000002 NCBI chr15:75,346,638...75,357,115
Ensembl chr15:75,346,955...75,357,115
JBrowse link
G NEIL2 nei like DNA glycosylase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345
JBrowse link
G NEIL3 nei like DNA glycosylase 3 IDA
IBA
ISS
(PMID:23755964)
(PMID:21873635)
HGNC
GO_Central
UniProtKB
PMID:21873635, PMID:23755964 GO_REF:0000024 NCBI chr 4:177,309,871...177,362,936
Ensembl chr 4:177,309,874...177,362,936
JBrowse link
G NTHL1 nth like DNA glycosylase 1 IEA InterPro GO_REF:0000002 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase IEA
TAS
(PMID:9190902) InterPro
PINC
PMID:9190902 GO_REF:0000002 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO (MGI:MGI:2181257|PMID:11948190) MGI PMID:11948190 MGI:MGI:2181257 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,691...226,408,093
JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 IEA Ensembl GO_REF:0000107 NCBI chr14:20,343,041...20,357,904
Ensembl chr14:20,343,582...20,357,905
JBrowse link
G POLB DNA polymerase beta IDA
IBA
IMP
(PMID:16600869)
(PMID:21873635)
(PMID:21362556)
UniProtKB
GO_Central
PMID:16600869, PMID:21362556, PMID:21873635 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
G POLQ DNA polymerase theta IDA (PMID:19188258) UniProtKB PMID:19188258 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,427...121,546,641
JBrowse link
G PRMT6 protein arginine methyltransferase 6 TAS (PMID:16600869) UniProtKB PMID:16600869 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636
JBrowse link
G RPA1 replication protein A1 IDA (PMID:9765279) UniProtKB PMID:9765279 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G RPA2 replication protein A2 IDA (PMID:9765279) UniProtKB PMID:9765279 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746
JBrowse link
G RPA3 replication protein A3 IDA
IBA
(PMID:9765279)
(PMID:21873635)
UniProtKB
GO_Central
PMID:9765279, PMID:21873635 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607
JBrowse link
G SIRT6 sirtuin 6 IEA Ensembl GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 IDA
IEA
(PMID:12161446) HGNC
InterPro
PMID:12161446 GO_REF:0000002 NCBI chr12:54,121,274...54,188,985
Ensembl chr12:54,121,277...54,189,008
JBrowse link
G TDG thymine DNA glycosylase IDA (PMID:21862836), (PMID:22327402) UniProtKB PMID:21862836, PMID:22327402 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G UNG uracil DNA glycosylase IEA
IDA
TAS
(PMID:12161446)
(PMID:10805771)
InterPro
HGNC
UniProtKB
PINC
PMID:10805771, PMID:12161446 GO_REF:0000002, GO_REF:0000104 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
G USP47 ubiquitin specific peptidase 47 IMP (PMID:21362556) UniProtKB PMID:21362556 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887
JBrowse link
G WRN WRN RecQ like helicase IDA (PMID:17611195) UniProtKB PMID:17611195 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G XPA XPA, DNA damage recognition and repair factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:97,654,398...97,697,403
Ensembl chr 9:97,674,909...97,697,357
Ensembl chr 9:97,674,909...97,697,357
JBrowse link
G XRCC1 X-ray repair cross complementing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,040...43,580,473
Ensembl chr19:43,543,040...43,580,473
JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTHL1 nth like DNA glycosylase 1 IDA
IBA
IEA
(PMID:15358233)
(PMID:21873635)
UniProtKB
GO_Central
InterPro
PMID:15358233, PMID:21873635 GO_REF:0000002 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G TDG thymine DNA glycosylase IDA
IBA
IMP
(PMID:11889051)
(PMID:21873635)
(PMID:18512959)
CAFA
GO_Central
PMID:11889051, PMID:18512959, PMID:21873635 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UNG uracil DNA glycosylase IDA
IBA
(PMID:18973764)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18973764, PMID:21873635 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
base-excision repair, base-free sugar-phosphate removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 TAS Reactome Reactome:R-HSA-110375 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772
JBrowse link
G POLB DNA polymerase beta TAS Reactome Reactome:R-HSA-110375 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG3 DNA ligase 3 IDA
IBA
TAS
IMP
(PMID:19589734)
(PMID:21873635)
(PMID:24674627)
BHF-UCL
GO_Central
Reactome
PMID:19589734, PMID:21873635, PMID:24674627 Reactome:R-HSA-73931 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G POLB DNA polymerase beta TAS Reactome Reactome:R-HSA-73931 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
G XRCC1 X-ray repair cross complementing 1 TAS Reactome Reactome:R-HSA-73931 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,040...43,580,473
Ensembl chr19:43,543,040...43,580,473
JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen IEA Ensembl GO_REF:0000107 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G POLB DNA polymerase beta IEA Ensembl GO_REF:0000107 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit IEA
IBA
IDA
(PMID:21873635)
(PMID:10559260), (PMID:10559261)
Ensembl
GO_Central
UniProtKB
PMID:10559260, PMID:10559261, PMID:21873635 GO_REF:0000107 NCBI chr19:50,384,291...50,418,018
Ensembl chr19:50,384,204...50,418,018
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IDA
IBA
(PMID:10559260)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10559260, PMID:21873635 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
G POLG DNA polymerase gamma, catalytic subunit IDA (PMID:15177179) MGI PMID:15177179 NCBI chr15:89,316,320...89,334,824
Ensembl chr15:89,305,198...89,334,861
JBrowse link
G POLL DNA polymerase lambda IDA (PMID:19806195) UniProtKB PMID:19806195 NCBI chr10:101,578,882...101,588,319
Ensembl chr10:101,578,882...101,588,270
JBrowse link
depurination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPG N-methylpurine DNA glycosylase TAS Reactome Reactome:R-HSA-110330, Reactome:R-HSA-110331 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,853
Ensembl chr16:77,007...85,853
JBrowse link
G MUTYH mutY DNA glycosylase TAS Reactome Reactome:R-HSA-110330, Reactome:R-HSA-110331 NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase TAS Reactome Reactome:R-HSA-110330, Reactome:R-HSA-110331 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
depyrimidination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 3:129,430,947...129,440,029
Ensembl chr 3:129,430,944...129,440,179
JBrowse link
G NEIL1 nei like DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr15:75,346,638...75,357,115
Ensembl chr15:75,346,955...75,357,115
JBrowse link
G NEIL2 nei like DNA glycosylase 2 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345
JBrowse link
G NTHL1 nth like DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:54,121,274...54,188,985
Ensembl chr12:54,121,277...54,189,008
JBrowse link
G TDG thymine DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G UNG uracil DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
DNA dealkylation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH1 alkB homolog 1, histone H2A dioxygenase IDA (PMID:18603530) UniProtKB PMID:18603530 NCBI chr14:77,672,404...77,708,038
Ensembl chr14:77,672,404...77,708,023
JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase IDA
IBA
TAS
(PMID:18432238)
(PMID:21873635)
(PMID:18775698)
UniProtKB
GO_Central
BHF-UCL
PMID:18432238, PMID:18775698, PMID:21873635 Reactome:R-HSA-112122 NCBI chr12:109,088,189...109,093,631
Ensembl chr12:109,088,188...109,093,631
JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase IEA
IDA
TAS
(PMID:16858410), (PMID:22055184) InterPro
UniProtKB
Reactome
PMID:16858410, PMID:22055184 GO_REF:0000002, Reactome:R-HSA-112126, Reactome:R-HSA-5657637 NCBI chr11:43,880,831...43,920,274
Ensembl chr11:43,880,811...43,920,274
JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase TAS Reactome Reactome:R-HSA-73943 NCBI chr17:18,183,828...18,209,954
Ensembl chr17:18,183,078...18,209,954
JBrowse link
G ASCC1 activating signal cointegrator 1 complex subunit 1 TAS Reactome Reactome:R-HSA-112126, Reactome:R-HSA-5657637 NCBI chr10:72,096,032...72,218,777
Ensembl chr10:72,096,032...72,217,134
JBrowse link
G ASCC2 activating signal cointegrator 1 complex subunit 2 TAS Reactome Reactome:R-HSA-112126, Reactome:R-HSA-5657637 NCBI chr22:29,788,608...29,838,282
Ensembl chr22:29,788,609...29,838,304
JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 IDA
TAS
(PMID:22055184) UniProtKB
Reactome
PMID:22055184 Reactome:R-HSA-112126, Reactome:R-HSA-5657637 NCBI chr 6:100,508,194...100,884,455
Ensembl chr 6:100,508,194...100,881,372
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase IEA
IDA
TAS
(PMID:18775698), (PMID:20376003) InterPro
UniProtKB
Reactome
PMID:18775698, PMID:20376003 GO_REF:0000002, Reactome:R-HSA-73943 NCBI chr16:53,703,963...54,121,941
Ensembl chr16:53,701,692...54,158,512
JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase TAS
IEA
Reactome
Ensembl
GO_REF:0000107, Reactome:R-HSA-5657651, Reactome:R-HSA-73892 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983
JBrowse link
G MPG N-methylpurine DNA glycosylase TAS (PMID:1645538) PINC PMID:1645538 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,853
Ensembl chr16:77,007...85,853
JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase TAS Reactome Reactome:R-HSA-5693608 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
JBrowse link
G BARD1 BRCA1 associated RING domain 1 TAS Reactome Reactome:R-HSA-5693608 NCBI chr 2:214,725,645...214,809,683
Ensembl chr 2:214,725,646...214,809,683
JBrowse link
G BLM BLM RecQ like helicase IDA (PMID:21325134) UniProtKB PMID:21325134 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G BRCA1 BRCA1 DNA repair associated TAS Reactome Reactome:R-HSA-5693608 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 IDA (PMID:21325134) UniProtKB PMID:21325134 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 IDA (PMID:26807646) UniProtKB PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,511...69,244,020
JBrowse link
G KAT5 lysine acetyltransferase 5 TAS Reactome Reactome:R-HSA-5693608 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease TAS Reactome Reactome:R-HSA-5693608 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G NBN nibrin TAS Reactome Reactome:R-HSA-5693608 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G RAD50 RAD50 double strand break repair protein TAS Reactome Reactome:R-HSA-5693608 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RBBP8 RB binding protein 8, endonuclease TAS Reactome Reactome:R-HSA-5693608 NCBI chr18:22,914,121...23,026,486
Ensembl chr18:22,798,261...23,026,488
JBrowse link
G SETMAR SET domain and mariner transposase fusion gene IDA (PMID:21491884) UniProtKB PMID:21491884 NCBI chr 3:4,303,304...4,320,649
Ensembl chr 3:4,303,304...4,317,567
JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 IMP (PMID:22960744) UniProtKB PMID:22960744 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292
JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N IMP (PMID:17349954) HGNC PMID:17349954 NCBI chr12:93,405,684...93,442,336
Ensembl chr12:93,405,673...93,441,947
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 IMP (PMID:17349954) HGNC PMID:17349954 NCBI chr 8:47,997,527...48,064,708
Ensembl chr 8:48,008,415...48,064,708
JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD52 RAD52 homolog, DNA repair protein IDA (PMID:19506022) MGI PMID:19506022 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
G RBBP8 RB binding protein 8, endonuclease IEA
IBA
IMP
(PMID:21873635)
(PMID:18716619), (PMID:19202191)
InterPro
GO_Central
UniProtKB
PMID:18716619, PMID:19202191, PMID:21873635 GO_REF:0000002 NCBI chr18:22,914,121...23,026,486
Ensembl chr18:22,798,261...23,026,488
JBrowse link
G RNF138 ring finger protein 138 IMP
IBA
(PMID:26502057)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:26502057 NCBI chr18:32,091,858...32,131,561
Ensembl chr18:32,091,874...32,131,561
JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit IMP (PMID:19595721) UniProtKB PMID:19595721 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,887...30,197,561
Ensembl chr16:30,193,887...30,197,561
JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit IMP (PMID:19595721) UniProtKB PMID:19595721 NCBI chr16:29,454,501...29,458,219
Ensembl chr16:29,454,501...29,458,219
JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit IMP (PMID:19595721) UniProtKB PMID:19595721 NCBI chr16:3,579,653...3,611,639
Ensembl chr16:3,581,181...3,611,606
JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 ISS UniProtKB GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 ISS UniProtKB GO_REF:0000024 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G LIG1 DNA ligase 1 NOT IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr19:48,115,445...48,170,595
Ensembl chr19:48,115,445...48,170,603
JBrowse link
G LIG3 DNA ligase 3 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G LIG4 DNA ligase 4 IEA
IBA
ISS
IDA
(PMID:21873635)
(PMID:12517771)
InterPro
GO_Central
UniProtKB
PMID:12517771, PMID:21873635 GO_REF:0000002, GO_REF:0000024 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G PAXX PAXX non-homologous end joining factor IMP
IBA
(PMID:25574025)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:25574025 NCBI chr 9:136,992,422...136,993,976
Ensembl chr 9:136,992,422...136,993,984
JBrowse link
G XRCC4 X-ray repair cross complementing 4 IDA
IBA
(PMID:12517771)
(PMID:21873635)
UniProtKB
GO_Central
PMID:12517771, PMID:21873635 NCBI chr 5:83,077,534...83,370,333
Ensembl chr 5:83,077,498...83,353,787
JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMC1 DNA meiotic recombinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,509,154...38,570,286
Ensembl chr22:38,518,948...38,570,204
JBrowse link
G RAD51 RAD51 recombinase IMP
IBA
(PMID:26681308)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:26681308 NCBI chr15:40,694,774...40,732,340
Ensembl chr15:40,694,774...40,732,340
JBrowse link
G RAD52 RAD52 homolog, DNA repair protein IEA InterPro GO_REF:0000002 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
G SWI5 SWI5 homologous recombination repair protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:128,275,356...128,288,989
Ensembl chr 9:128,275,379...128,316,123
JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr19:50,384,291...50,418,018
Ensembl chr19:50,384,204...50,418,018
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2D cyclin dependent kinase inhibitor 2D IMP (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,566,460...10,568,979
Ensembl chr19:10,566,460...10,569,059
JBrowse link
G HROB homologous recombination factor with OB-fold IMP (PMID:31467087) UniProt PMID:31467087 NCBI chr17:44,141,930...44,162,477
Ensembl chr17:44,141,906...44,162,476
JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit IMP (PMID:11470886) UniProtKB PMID:11470886 NCBI chr  X:24,693,877...24,996,986
Ensembl chr  X:24,693,909...24,996,986
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit IMP
IDA
(PMID:1730053)
(PMID:24191025), (PMID:3335506)
UniProtKB
UniProt
PMID:1730053, PMID:3335506, PMID:24191025 NCBI chr19:50,384,291...50,418,018
Ensembl chr19:50,384,204...50,418,018
JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit NAS (PMID:7910606) UniProtKB PMID:7910606 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117
JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:67,350,765...67,353,596
Ensembl chr11:67,350,772...67,356,972
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IMP (PMID:1730053) UniProtKB PMID:1730053 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
G POLH DNA polymerase eta IDA (PMID:17563354) UniProtKB PMID:17563354 NCBI chr 6:43,576,147...43,620,523
Ensembl chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523
JBrowse link
G RFC3 replication factor C subunit 3 TAS (PMID:9488738) UniProtKB PMID:9488738 NCBI chr13:33,818,075...33,973,946
Ensembl chr13:33,818,069...33,966,558
JBrowse link
G SIRT1 sirtuin 1 ISS UniProtKB GO_REF:0000024 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G WRN WRN RecQ like helicase IDA (PMID:17563354) UniProtKB PMID:17563354 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G WRNIP1 WRN helicase interacting protein 1 IDA (PMID:15670210) UniProtKB PMID:15670210 NCBI chr 6:2,765,341...2,786,952
Ensembl chr 6:2,765,393...2,786,952
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT IMP (PMID:1730053) UniProtKB PMID:1730053 NCBI chr  X:24,693,877...24,996,986
Ensembl chr  X:24,693,909...24,996,986
JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117
JBrowse link
G TREX1 three prime repair exonuclease 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit IMP (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProtKB PMID:17525340, PMID:17643121, PMID:19261748 NCBI chr 4:83,459,517...83,485,137
Ensembl chr 4:83,459,517...83,523,348
JBrowse link
G ACTR5 actin related protein 5 IMP
IBA
(PMID:19014934)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19014934, PMID:21873635 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520
JBrowse link
G ACTR8 actin related protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:53,858,992...53,882,160
Ensembl chr 3:53,867,066...53,882,152
JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 IEA Ensembl GO_REF:0000107 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,124...6,419,414
JBrowse link
G APLF aprataxin and PNKP like factor IMP
IEA
IBA
(PMID:17396150)
(PMID:21873635)
UniProtKB
InterPro
GO_Central
PMID:17396150, PMID:21873635 GO_REF:0000002 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862
JBrowse link
G APTX aprataxin IDA
IBA
(PMID:17519253)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17519253, PMID:21873635 NCBI chr 9:32,883,872...33,025,120
Ensembl chr 9:32,886,601...33,025,130
JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 IMP (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProtKB PMID:19261746, PMID:19261748, PMID:19261749 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,418...17,282,966
Ensembl chr19:17,267,418...17,282,966
JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 IMP (PMID:19261748) UniProtKB PMID:19261748 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901
JBrowse link
G BRCA1 BRCA1 DNA repair associated IDA
IMP
(PMID:22186889)
(PMID:17525340), (PMID:17643121), (PMID:19261748)
CACAO
UniProtKB
PMID:17525340, PMID:17643121, PMID:19261748, PMID:22186889 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BRCA2 BRCA2 DNA repair associated IMP (PMID:16845393) UniProtKB PMID:16845393 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 IMP
IBA
(PMID:17525341), (PMID:19261746), (PMID:19261748)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17525341, PMID:19261746, PMID:19261748, PMID:21873635 NCBI chr  X:155,071,403...155,126,766
Ensembl chr  X:155,071,420...155,123,074
JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 NAS (PMID:11301010) UniProtKB PMID:11301010 NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,528
JBrowse link
G CDCA5 cell division cycle associated 5 IMP
IBA
(PMID:17349791)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17349791, PMID:21873635 NCBI chr11:65,061,009...65,084,129
Ensembl chr11:65,066,300...65,084,164
JBrowse link
G CHEK2 checkpoint kinase 2 IMP (PMID:18317453) UniProtKB PMID:18317453 NCBI chr22:28,687,743...28,741,866
Ensembl chr22:28,687,743...28,742,422
JBrowse link
G CIB1 calcium and integrin binding 1 TAS (PMID:9372844) PINC PMID:9372844 NCBI chr15:90,229,975...90,265,759
Ensembl chr15:90,229,975...90,234,047
JBrowse link
G DCLRE1C DNA cross-link repair 1C ISO (MGI:MGI:3514096|PMID:12615897) MGI PMID:12615897 MGI:MGI:3514096 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432
JBrowse link
G DDX1 DEAD-box helicase 1 IDA (PMID:18710941) UniProtKB PMID:18710941 NCBI chr 2:15,591,868...15,631,101
Ensembl chr 2:15,591,178...15,631,111
JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L IMP (PMID:23230272) UniProtKB PMID:23230272 NCBI chr 3:122,564,338...122,575,203
Ensembl chr 3:122,564,338...122,575,203
JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:50,373,224...50,381,483
Ensembl chr17:50,373,220...50,381,483
JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:1,773,222...1,776,714
Ensembl chr16:1,772,810...1,781,708
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit NOT ISO (MGI:MGI:2153690|PMID:11707424)
(MGI:MGI:3047512|PMID:15199134)
(MGI:MGI:3770581|PMID:17912366)
MGI PMID:11707424, PMID:15199134, PMID:17912366 MGI:MGI:2153690, MGI:MGI:3047512, MGI:MGI:3770581 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,333...45,478,828
Ensembl chr19:45,407,333...45,478,828
JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:27,771,949...27,812,430
Ensembl chr 8:27,771,949...27,812,640
JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 IDA (PMID:26807646) UniProtKB PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,511...69,244,020
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IMP (PMID:19234442) UniProtKB PMID:19234442 NCBI chr 8:71,197,433...71,548,104
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 IMP (PMID:19234442) UniProtKB PMID:19234442 NCBI chr 1:27,970,344...28,088,671
Ensembl chr 1:27,970,344...28,088,637
JBrowse link
G FEN1 flap structure-specific endonuclease 1 TAS (PMID:8131753) PINC PMID:8131753 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238
JBrowse link
G GGN gametogenetin IEA InterPro GO_REF:0000002 NCBI chr19:38,384,267...38,388,603
Ensembl chr19:38,384,267...38,388,082
JBrowse link
G H2AX H2A.X variant histone NAS (PMID:19234442) UniProtKB PMID:19234442 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G INO80 INO80 complex ATPase subunit IMP (PMID:20687897) UniProtKB PMID:20687897 NCBI chr15:40,978,880...41,117,778
Ensembl chr15:40,978,880...41,116,280
JBrowse link
G KAT5 lysine acetyltransferase 5 IMP (PMID:10966108) UniProtKB PMID:10966108 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G LIG3 DNA ligase 3 IDA (PMID:19589734) BHF-UCL PMID:19589734 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G LIG4 DNA ligase 4 ISS
IDA
(PMID:19589734), (PMID:9242410) UniProtKB
BHF-UCL
PMID:9242410, PMID:19589734 GO_REF:0000024 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 IGI (PMID:15988022) UniProtKB PMID:15988022 NCBI chr 1:11,674,480...11,691,559
Ensembl chr 1:11,674,480...11,691,650
JBrowse link
G MARF1 meiosis regulator and mRNA stability factor 1 IEA Ensembl GO_REF:0000107 NCBI chr16:15,594,387...15,643,166
Ensembl chr16:15,594,387...15,643,154
JBrowse link
G MEIOC meiosis specific with coiled-coil domain IEA Ensembl GO_REF:0000107 NCBI chr17:44,656,417...44,677,086
Ensembl chr17:44,656,404...44,690,308
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease TAS
IEA
(PMID:10612394) PINC
UniProt
PMID:10612394 GO_REF:0000104 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G MSH2 mutS homolog 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:47,403,067...47,634,501
Ensembl chr 2:47,403,067...47,663,146
Ensembl chr 2:47,403,067...47,663,146
JBrowse link
G MTA1 metastasis associated 1 IMP
IBA
(PMID:19805145)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19805145, PMID:21873635 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729
JBrowse link
G NBN nibrin IDA
IEA
(PMID:9590181) UniProtKB
InterPro
PMID:9590181 GO_REF:0000002 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G NHEJ1 non-homologous end joining factor 1 IEA InterPro GO_REF:0000002 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,357...219,160,865
Ensembl chr 2:219,069,357...219,160,865
JBrowse link
G NIPBL NIPBL cohesin loading factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 IMP
IBA
(PMID:23230272)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23230272 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,691...226,408,093
JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:20,343,041...20,357,904
Ensembl chr14:20,343,582...20,357,905
JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 IMP
IBA
IEA
IDA
(PMID:21211721)
(PMID:21873635)
(PMID:21270334)
MGI
GO_Central
InterPro
PMID:21211721, PMID:21270334, PMID:21873635 GO_REF:0000002 NCBI chr 3:51,942,290...51,948,867
Ensembl chr 3:51,942,345...51,948,867
JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 IMP (PMID:23230272) UniProtKB PMID:23230272 NCBI chr 3:122,527,924...122,564,784
Ensembl chr 3:122,527,924...122,564,577
JBrowse link
G POLQ DNA polymerase theta IDA (PMID:22135286) UniProtKB PMID:22135286 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,427...121,546,641
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit IMP
IBA
(PMID:18710952)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:18710952, PMID:21873635 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
G RAD21 RAD21 cohesin complex component TAS (PMID:8812457) PINC PMID:8812457 NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5288570|PMID:21743440) MGI PMID:21743440 MGI:MGI:5288570 NCBI chr20:1,226,043...1,255,876
Ensembl chr20:1,226,056...1,296,421
JBrowse link
G RAD50 RAD50 double strand break repair protein IMP (PMID:9590181) UniProtKB PMID:9590181 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD52 RAD52 homolog, DNA repair protein TAS (PMID:7774919) PINC PMID:7774919 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
G RAD54L RAD54 like ISO (MGI:MGI:3043875|PMID:15175260) MGI PMID:15175260 MGI:MGI:3043875 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G RNF168 ring finger protein 168 IDA (PMID:19203578), (PMID:19203579), (PMID:22980979) UniProtKB PMID:19203578, PMID:19203579, PMID:22980979 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768
JBrowse link
G RNF8 ring finger protein 8 IDA
IBA
(PMID:18001824), (PMID:18001825), (PMID:22980979)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18001824, PMID:18001825, PMID:21873635, PMID:22980979 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734
JBrowse link
G SETX senataxin IDA (PMID:17562789) UniProtKB PMID:17562789 NCBI chr 9:132,261,356...132,356,726
Ensembl chr 9:132,261,356...132,354,986
JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 IEA InterPro GO_REF:0000002 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,738...2,805,017
Ensembl chr18:2,655,738...2,805,017
JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 IDA
IBA
(PMID:12023295)
(PMID:21873635)
UniProtKB
GO_Central
PMID:12023295, PMID:21873635 NCBI chr14:89,954,923...90,044,768
Ensembl chr14:89,954,939...90,044,764
JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 IDA
IBA
IMP
(PMID:19794497)
(PMID:21873635)
(PMID:21030584)
UniProtKB
GO_Central
PMID:19794497, PMID:21030584, PMID:21873635 NCBI chr 6:24,649,979...24,666,899
Ensembl chr 6:24,649,979...24,666,930
JBrowse link
G TENT4A terminal nucleotidyltransferase 4A NAS (PMID:10066793) UniProtKB PMID:10066793 NCBI chr 5:6,713,432...6,757,045
Ensembl chr 5:6,713,432...6,757,044
JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 IMP (PMID:25749521) BHF-UCL PMID:25749521 NCBI chr11:57,299,631...57,324,952
Ensembl chr11:57,299,638...57,324,952
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr17:7,668,402...7,687,550
Ensembl chr17:7,661,779...7,687,538
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 ISS UniProtKB GO_REF:0000024 NCBI chr 5:892,884...919,348
Ensembl chr 5:892,884...919,357
JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 IMP
IBA
IEA
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
(PMID:21873635)
UniProtKB
GO_Central
InterPro
PMID:17525340, PMID:17525341, PMID:17525342, PMID:17643121, PMID:19261748, PMID:21873635 GO_REF:0000002 NCBI chr 5:176,905,005...177,022,640
Ensembl chr 5:176,905,005...177,022,633
JBrowse link
G VCP valosin containing protein IDA (PMID:10855792), (PMID:22120668) UniProtKB PMID:10855792, PMID:22120668 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,056,064...35,072,627
JBrowse link
G WRN WRN RecQ like helicase IMP (PMID:21639834) UniProtKB PMID:21639834 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G XRCC4 X-ray repair cross complementing 4 IDA (PMID:9242410) UniProtKB PMID:9242410 NCBI chr 5:83,077,534...83,370,333
Ensembl chr 5:83,077,498...83,353,787
JBrowse link
G XRCC5 X-ray repair cross complementing 5 IMP (PMID:19581589) BHF-UCL PMID:19581589 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303
JBrowse link
G XRCC6 X-ray repair cross complementing 6 ISO (MGI:MGI:2155497|PMID:11751629) MGI PMID:11751629 MGI:MGI:2155497 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
Ensembl chr22:41,621,163...41,664,048
JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,528
JBrowse link
G FANCD2 FA complementation group D2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,414...10,101,932
Ensembl chr 3:10,026,414...10,101,932
JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:66,870,757...66,926,436
Ensembl chr 8:66,870,749...66,922,048
JBrowse link
G PRDM9 PR/SET domain 9 ISS UniProt GO_REF:0000024 NCBI chr 5:23,507,155...23,528,093
Ensembl chr 5:23,443,586...23,528,597
Ensembl chr 5:23,443,586...23,528,597
JBrowse link
G SPO11 SPO11 initiator of meiotic double stranded breaks IEA Ensembl GO_REF:0000107 NCBI chr20:57,329,757...57,343,993
Ensembl chr20:57,329,803...57,343,994
JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMCES 5-hydroxymethylcytosine binding, ES cell specific IEA Ensembl GO_REF:0000107 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186
JBrowse link
G LIG3 DNA ligase 3 IGI
IBA
(PMID:24837021)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:21873635, PMID:24837021 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G POLQ DNA polymerase theta IDA (PMID:25643323) UniProtKB PMID:25643323 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,427...121,546,641
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit TAS (PMID:18710952) BHF-UCL PMID:18710952 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:19,479,294...19,520,612
Ensembl chr22:19,479,457...19,520,612
JBrowse link
G CDC7 cell division cycle 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:91,498,968...91,525,764
Ensembl chr 1:91,500,851...91,525,764
JBrowse link
G GINS2 GINS complex subunit 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:85,676,198...85,688,954
Ensembl chr16:85,676,198...85,690,073
JBrowse link
G GINS4 GINS complex subunit 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:41,529,205...41,545,030
Ensembl chr 8:41,529,218...41,545,030
JBrowse link
G MCM2 minichromosome maintenance complex component 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:127,598,411...127,622,436
Ensembl chr 3:127,598,410...127,622,436
JBrowse link
G MCM3 minichromosome maintenance complex component 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:52,264,015...52,284,742
Ensembl chr 6:52,264,014...52,284,881
JBrowse link
G MCM4 minichromosome maintenance complex component 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:47,960,941...47,978,160
Ensembl chr 8:47,960,185...47,978,160
JBrowse link
G MCM5 minichromosome maintenance complex component 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:35,400,133...35,454,942
Ensembl chr22:35,400,134...35,425,431
JBrowse link
G MCM6 minichromosome maintenance complex component 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:135,839,626...135,876,443
Ensembl chr 2:135,839,626...135,876,443
JBrowse link
G MCM7 minichromosome maintenance complex component 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,728...100,101,940
JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:66,870,757...66,926,436
Ensembl chr 8:66,870,749...66,922,048
JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:65,860,244...65,867,653
Ensembl chr11:65,857,126...65,867,653
JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,470...49,539,538
JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073
Ensembl chr 5:60,866,454...60,945,073
JBrowse link
G LIG4 DNA ligase 4 IMP (PMID:24837021) BHF-UCL PMID:24837021 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G UVRAG UV radiation resistance associated IDA (PMID:22542840) UniProtKB PMID:22542840 NCBI chr11:75,815,189...76,144,232
Ensembl chr11:75,815,210...76,144,232
JBrowse link
G XRCC6 X-ray repair cross complementing 6 IDA (PMID:24095731) BHF-UCL PMID:24095731 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
Ensembl chr22:41,621,163...41,664,048
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A ISS UniProt GO_REF:0000024 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899
JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP5S1 adaptor related protein complex 5 subunit sigma 1 IEA
IMP
(PMID:20613862) InterPro
UniProtKB
PMID:20613862 GO_REF:0000002 NCBI chr20:3,820,547...3,828,838
Ensembl chr20:3,820,524...3,828,838
JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 IMP (PMID:20613862) UniProtKB PMID:20613862 NCBI chr 7:4,775,623...4,794,397
Ensembl chr 7:4,775,615...4,794,397
JBrowse link
G ATM ATM serine/threonine kinase IEA Ensembl GO_REF:0000107 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
JBrowse link
G AUNIP aurora kinase A and ninein interacting protein IDA (PMID:29042561) UniProtKB PMID:29042561 NCBI chr 1:25,831,906...25,859,457
Ensembl chr 1:25,831,913...25,859,458
JBrowse link
G BLM BLM RecQ like helicase NAS
IBA
(PMID:11309417)
(PMID:21873635)
UniProtKB
GO_Central
PMID:11309417, PMID:21873635 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G BRCA1 BRCA1 DNA repair associated IDA
IBA
(PMID:17349954)
(PMID:21873635)
HGNC
GO_Central
PMID:17349954, PMID:21873635 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BRCA2 BRCA2 DNA repair associated IEA
IBA
IDA
IMP
(PMID:21873635)
(PMID:20729832)
(PMID:21719596)
InterPro
GO_Central
UniProtKB
PMID:20729832, PMID:21719596, PMID:21873635 GO_REF:0000002 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit IMP
IBA
(PMID:14728600)
(PMID:21873635)
UniProtKB
GO_Central
PMID:14728600, PMID:21873635 NCBI chr16:13,920,137...13,952,348
Ensembl chr16:13,920,154...13,952,348
Ensembl chr16:13,920,154...13,952,348
JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 IDA (PMID:26807646) UniProtKB PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,511...69,244,020
JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 IMP (PMID:20603015), (PMID:20603016) UniProtKB PMID:20603015, PMID:20603016 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108
JBrowse link
G FBH1 F-box DNA helicase 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594
JBrowse link
G FEN1 flap structure-specific endonuclease 1 TAS Reactome Reactome:R-HSA-5693538 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238
JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease IMP (PMID:23166748) UniProtKB PMID:23166748 NCBI chr 2:17,753,687...17,788,946
Ensembl chr 2:17,753,858...17,788,946
JBrowse link
G H2AX H2A.X variant histone IEA Ensembl GO_REF:0000107 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G HELQ helicase, POLQ like IMP (PMID:19995904) UniProtKB PMID:19995904 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855
JBrowse link
G HUS1 HUS1 checkpoint clamp component IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:47,962,980...47,979,619
Ensembl chr 7:47,963,288...47,979,615
JBrowse link
G HUS1B HUS1 checkpoint clamp component B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:655,939...656,964
Ensembl chr 6:655,939...656,963
JBrowse link
G INO80 INO80 complex ATPase subunit IMP (PMID:18026119) UniProtKB PMID:18026119 NCBI chr15:40,978,880...41,117,778
Ensembl chr15:40,978,880...41,116,280
JBrowse link
G KASH5 KASH domain containing 5 IEA Ensembl GO_REF:0000107 NCBI chr19:49,388,218...49,418,002
Ensembl chr19:49,388,219...49,417,990
JBrowse link
G KDM4D lysine demethylase 4D IMP (PMID:24550317) MGI PMID:24550317 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519
JBrowse link
G LIG3 DNA ligase 3 TAS Reactome Reactome:R-HSA-5693538 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor IMP
IBA
(PMID:23401855)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:23401855 NCBI chr20:5,950,652...6,000,941
Ensembl chr20:5,950,652...5,998,977
JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor IDA
IBA
IMP
(PMID:22771115)
(PMID:21873635)
(PMID:23401855)
UniProtKB
GO_Central
UniProt
PMID:21873635, PMID:22771115, PMID:23401855 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162
JBrowse link
G MEIOB meiosis specific with OB-fold ISS UniProtKB GO_REF:0000024 NCBI chr16:1,833,986...1,872,164
Ensembl chr16:1,833,983...1,884,294
Ensembl chr16:1,833,983...1,884,294
JBrowse link
G MMS22L MMS22 like, DNA repair protein IMP
IBA
IEA
(PMID:21055983), (PMID:21055984), (PMID:21055985)
(PMID:21873635)
UniProtKB
GO_Central
InterPro
PMID:21055983, PMID:21055984, PMID:21055985, PMID:21873635 GO_REF:0000002 NCBI chr 6:97,142,161...97,283,437
Ensembl chr 6:97,142,161...97,283,217
JBrowse link
G MORF4L1 mortality factor 4 like 1 IDA (PMID:20332121) UniProtKB PMID:20332121 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease TAS
IDA
IBA
(PMID:29670289), (PMID:30612738)
(PMID:21873635)
Reactome
UniProt
GO_Central
PMID:21873635, PMID:29670289, PMID:30612738 Reactome:R-HSA-5693538 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G NABP1 nucleic acid binding protein 1 IMP
IBA
(PMID:19605351)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19605351, PMID:21873635 NCBI chr 2:191,678,136...191,686,943
Ensembl chr 2:191,678,068...191,696,664
Ensembl chr 2:191,678,068...191,696,664
JBrowse link
G NABP2 nucleic acid binding protein 2 IMP
IBA
(PMID:19605351)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19605351, PMID:21873635 NCBI chr12:56,222,012...56,229,858
Ensembl chr12:56,222,015...56,229,854
JBrowse link
G NBN nibrin TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-5693538 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:27,224,994...27,268,772
Ensembl chr16:27,224,994...27,268,772
JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase IEA
IBA
IMP
(PMID:21873635)
(PMID:16810316)
InterPro
GO_Central
UniProtKB
PMID:16810316, PMID:21873635 GO_REF:0000002 NCBI chr 8:125,091,779...125,367,125
Ensembl chr 8:125,091,679...125,367,120
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IMP
IBA
(PMID:26323318)
(PMID:21873635)
ParkinsonsUK-UCL
GO_Central
PMID:21873635, PMID:26323318 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
G PALB2 partner and localizer of BRCA2 IMP
IBA
IEA
IDA
(PMID:26323318)
(PMID:21873635)
(PMID:19369211), (PMID:19423707)
ParkinsonsUK-UCL
GO_Central
InterPro
UniProtKB
PMID:19369211, PMID:19423707, PMID:21873635, PMID:26323318 GO_REF:0000002 NCBI chr16:23,603,162...23,641,337
Ensembl chr16:23,603,160...23,641,310
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 TAS Reactome Reactome:R-HSA-5693538 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,691...226,408,093
JBrowse link
G POLL DNA polymerase lambda IMP (PMID:20693240) UniProtKB PMID:20693240 NCBI chr10:101,578,882...101,588,319
Ensembl chr10:101,578,882...101,588,270
JBrowse link
G POLN DNA polymerase nu IMP (PMID:19995904) UniProtKB PMID:19995904 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121
JBrowse link
G POLQ DNA polymerase theta TAS Reactome Reactome:R-HSA-5693538 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,427...121,546,641
JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 IMP (PMID:22909820) UniProtKB PMID:22909820 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5428050|PMID:22711701) MGI PMID:22711701 MGI:MGI:5428050 NCBI chr20:1,226,043...1,255,876
Ensembl chr20:1,226,056...1,296,421
JBrowse link
G RAD50 RAD50 double strand break repair protein TAS Reactome Reactome:R-HSA-5693538 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD51 RAD51 recombinase IDA
IMP
TAS
(PMID:16428451)
(PMID:22778135), (PMID:23509288), (PMID:26681308)
(PMID:12427746)
MGI
BHF-UCL
UniProtKB
PMID:12427746, PMID:16428451, PMID:22778135, PMID:23509288, PMID:26681308 NCBI chr15:40,694,774...40,732,340
Ensembl chr15:40,694,774...40,732,340
JBrowse link
G RAD51AP1 RAD51 associated protein 1 IMP
IBA
NAS
(PMID:26323318)
(PMID:21873635)
(PMID:9396801)
ParkinsonsUK-UCL
GO_Central
UniProtKB
PMID:9396801, PMID:21873635, PMID:26323318 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,048
JBrowse link
G RAD51AP2 RAD51 associated protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:17,510,579...17,538,329
Ensembl chr 2:17,510,584...17,518,439
JBrowse link
G RAD51B RAD51 paralog B IEA
IBA
IMP
(PMID:21873635)
(PMID:23149936)
InterPro
GO_Central
UniProtKB
PMID:21873635, PMID:23149936 GO_REF:0000002 NCBI chr14:67,819,779...68,683,096
Ensembl chr14:67,819,779...68,730,218
JBrowse link
G RAD51C RAD51 paralog C IMP (PMID:23149936) UniProtKB PMID:23149936 NCBI chr17:58,692,140...58,735,611
Ensembl chr17:58,692,573...58,735,611
JBrowse link
G RAD51D RAD51 paralog D IMP
IBA
(PMID:23149936)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23149936 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,208...35,121,522
JBrowse link
G RAD52 RAD52 homolog, DNA repair protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
G RAD54B RAD54 homolog B IDA
IBA
(PMID:16428451)
(PMID:21873635)
MGI
GO_Central
PMID:16428451, PMID:21873635 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115
JBrowse link
G RAD54L RAD54 like ISO (MGI:MGI:3615835|PMID:16428451)
(MGI:MGI:3836659|PMID:19061978)
MGI PMID:16428451, PMID:19061978 MGI:MGI:3615835, MGI:MGI:3836659 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G RBBP8 RB binding protein 8, endonuclease TAS
IBA
IEA
(PMID:21873635) Reactome
GO_Central
InterPro
PMID:21873635 GO_REF:0000002, Reactome:R-HSA-5693538 NCBI chr18:22,914,121...23,026,486
Ensembl chr18:22,798,261...23,026,488
JBrowse link
G REC8 REC8 meiotic recombination protein ISO (MGI:MGI:5428050|PMID:22711701) MGI PMID:22711701 MGI:MGI:5428050 NCBI chr14:24,171,931...24,180,408
Ensembl chr14:24,171,853...24,180,257
JBrowse link
G RECQL RecQ like helicase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669
JBrowse link
G RECQL4 RecQ like helicase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845
JBrowse link
G RECQL5 RecQ like helicase 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:75,626,845...75,667,202
Ensembl chr17:75,626,845...75,667,189
JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715
JBrowse link
G RFWD3 ring finger and WD repeat domain 3 IDA
IMP
(PMID:26474068), (PMID:28575657), (PMID:28575658)
(PMID:28691929)
UniProtKB
UniProt
PMID:26474068, PMID:28575657, PMID:28575658, PMID:28691929 NCBI chr16:74,621,396...74,666,892
Ensembl chr16:74,621,399...74,666,877
JBrowse link
G RMI1 RecQ mediated genome instability 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:83,980,359...84,004,074
Ensembl chr 9:83,980,798...84,004,074
Ensembl chr 9:83,980,798...84,004,074
JBrowse link
G RNF138 ring finger protein 138 IMP
IBA
(PMID:26502055), (PMID:26502057)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:26502055, PMID:26502057 NCBI chr18:32,091,858...32,131,561
Ensembl chr18:32,091,874...32,131,561
JBrowse link
G RPA1 replication protein A1 IMP
IBA
(PMID:17765923)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17765923, PMID:21873635 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G RPA2 replication protein A2 IMP
IBA
(PMID:17765923)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17765923, PMID:21873635 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746
JBrowse link
G RPA3 replication protein A3 IMP
IBA
(PMID:17765923)
(PMID:21873635)
UniProtKB
GO_Central
PMID:17765923, PMID:21873635 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607
JBrowse link
G RPA4 replication protein A4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IDA (PMID:28834754), (PMID:29670289) UniProtKB PMID:28834754, PMID:29670289 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
JBrowse link
G SEM1 SEM1 26S proteasome complex subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:96,481,626...96,709,846
Ensembl chr 7:96,481,626...96,709,891
JBrowse link
G SFPQ splicing factor proline and glutamine rich IMP (PMID:20813759) MGI PMID:20813759 NCBI chr 1:35,176,380...35,193,174
Ensembl chr 1:35,176,378...35,193,145
JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 IMP
IBA
(PMID:21252223)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21252223, PMID:21873635 NCBI chr10:104,120,166...104,126,385
Ensembl chr10:104,122,058...104,126,385
JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit IMP
IBA
(PMID:19595721)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19595721, PMID:21873635 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,887...30,197,561
Ensembl chr16:30,193,887...30,197,561
JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit IMP
IBA
(PMID:19595721)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19595721, PMID:21873635 NCBI chr16:29,454,501...29,458,219
Ensembl chr16:29,454,501...29,458,219
JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit IMP (PMID:19595721), (PMID:19596235) UniProtKB PMID:19595721, PMID:19596235 NCBI chr16:3,579,653...3,611,639
Ensembl chr16:3,581,181...3,611,606
JBrowse link
G SMC5 structural maintenance of chromosomes 5 IMP (PMID:16810316) UniProtKB PMID:16810316 NCBI chr 9:70,258,962...70,354,873
Ensembl chr 9:70,258,978...70,354,873
JBrowse link
G SPIDR scaffold protein involved in DNA repair IMP
IBA
(PMID:23509288)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23509288 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306
JBrowse link
G SWI5 SWI5 homologous recombination repair protein IMP
IEA
(PMID:21252223) UniProtKB
Ensembl
PMID:21252223 GO_REF:0000107 NCBI chr 9:128,275,356...128,288,989
Ensembl chr 9:128,275,379...128,316,123
JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 IMP
IBA
(PMID:21965664)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:21965664 NCBI chr19:11,374,666...11,376,169
Ensembl chr19:11,374,666...11,376,951
JBrowse link
G TONSL tonsoku like, DNA repair protein IMP (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:30773278) UniProt PMID:21055983, PMID:21055984, PMID:21055985, PMID:30773278 NCBI chr 8:144,428,775...144,444,488
Ensembl chr 8:144,428,775...144,444,440
JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N IMP (PMID:17349954) HGNC PMID:17349954 NCBI chr12:93,405,684...93,442,336
Ensembl chr12:93,405,673...93,441,947
JBrowse link
G WDR48 WD repeat domain 48 IEA Ensembl GO_REF:0000107 NCBI chr 3:39,052,002...39,096,666
Ensembl chr 3:39,052,013...39,096,671
JBrowse link
G WRN WRN RecQ like helicase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G XRCC1 X-ray repair cross complementing 1 TAS Reactome Reactome:R-HSA-5693538 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,040...43,580,473
Ensembl chr19:43,543,040...43,580,473
JBrowse link
G XRCC2 X-ray repair cross complementing 2 IMP
IBA
(PMID:23149936)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23149936 NCBI chr 7:152,644,776...152,676,141
Ensembl chr 7:152,644,776...152,676,141
JBrowse link
G XRCC3 X-ray repair cross complementing 3 IMP (PMID:23149936) UniProtKB PMID:23149936 NCBI chr14:103,697,611...103,715,486
Ensembl chr14:103,697,609...103,715,504
JBrowse link
G YY1 YY1 transcription factor IMP (PMID:18026119) UniProtKB PMID:18026119 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788
JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 IEA
IMP
(PMID:20613862) InterPro
UniProtKB
PMID:20613862 GO_REF:0000002 NCBI chr14:67,728,892...67,817,293
Ensembl chr14:67,727,374...67,816,590
JBrowse link
G ZSWIM7 zinc finger SWIM-type containing 7 IMP
IBA
(PMID:21965664)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:21965664 NCBI chr17:15,976,560...15,999,704
Ensembl chr17:15,976,560...15,999,717
JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit TAS Reactome Reactome:R-HSA-5693571 NCBI chr 4:83,459,517...83,485,137
Ensembl chr 4:83,459,517...83,523,348
JBrowse link
G ATM ATM serine/threonine kinase TAS Reactome Reactome:R-HSA-5693571 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
JBrowse link
G ATP23 ATP23 metallopeptidase and ATP synthase assembly factor homolog TAS (PMID:10219089) UniProtKB PMID:10219089 NCBI chr12:57,941,567...57,959,148
Ensembl chr12:57,906,039...57,959,148
JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,418...17,282,966
Ensembl chr19:17,267,418...17,282,966
JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901
JBrowse link
G BARD1 BRCA1 associated RING domain 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 2:214,725,645...214,809,683
Ensembl chr 2:214,725,646...214,809,683
JBrowse link
G BRCA1 BRCA1 DNA repair associated TAS Reactome Reactome:R-HSA-5693571 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 TAS Reactome Reactome:R-HSA-5693571 NCBI chr  X:155,071,403...155,126,766
Ensembl chr  X:155,071,420...155,123,074
JBrowse link
G CYREN cell cycle regulator of NHEJ IDA
IBA
(PMID:24610814)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24610814 NCBI chr 7:135,092,303...135,170,821
Ensembl chr 7:135,092,363...135,170,795
JBrowse link
G DCLRE1A DNA cross-link repair 1A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:113,834,725...113,854,394
Ensembl chr10:113,834,725...113,854,383
JBrowse link
G DCLRE1B DNA cross-link repair 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,905,213...113,914,086
JBrowse link
G DCLRE1C DNA cross-link repair 1C TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-5693571 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432
JBrowse link
G DNTT DNA nucleotidylexotransferase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:96,304,434...96,338,564
Ensembl chr10:96,304,409...96,338,564
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,333...45,478,828
Ensembl chr19:45,407,333...45,478,828
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr16:13,920,137...13,952,348
Ensembl chr16:13,920,154...13,952,348
Ensembl chr16:13,920,154...13,952,348
JBrowse link
G H2AX H2A.X variant histone TAS Reactome Reactome:R-HSA-5693571 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G H3-4 H3.4 histone TAS Reactome Reactome:R-HSA-5693571 NCBI chr 1:228,424,845...228,425,360
Ensembl chr 1:228,424,845...228,425,325
Ensembl chr 1:228,424,845...228,425,325
JBrowse link
G H4-16 H4 histone 16 TAS Reactome Reactome:R-HSA-5693571 NCBI chr12:14,770,720...14,771,131
Ensembl chr12:14,767,999...14,771,131
JBrowse link
G H4C1 H4 clustered histone 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,021,649...26,022,050
Ensembl chr 6:26,021,679...26,021,990
Ensembl chr 6:26,021,679...26,021,990
JBrowse link
G H4C11 H4 clustered histone 11 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:27,824,092...27,824,480
Ensembl chr 6:27,824,108...27,824,480
Ensembl chr 6:27,824,108...27,824,480
JBrowse link
G H4C12 H4 clustered histone 12 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:27,831,174...27,831,560
Ensembl chr 6:27,831,216...27,831,527
Ensembl chr 6:27,831,216...27,831,527
JBrowse link
G H4C13 H4 clustered histone 13 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:27,873,148...27,873,534
Ensembl chr 6:27,873,199...27,873,510
Ensembl chr 6:27,873,199...27,873,510
JBrowse link
G H4C14 H4 clustered histone 14 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 1:149,832,657...149,833,052
Ensembl chr 1:149,832,659...149,839,767
JBrowse link
G H4C15 H4 clustered histone 15 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 1:149,853,262...149,861,159
Ensembl chr 1:149,854,045...149,861,210
JBrowse link
G H4C2 H4 clustered histone 2 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,026,896...26,027,283
Ensembl chr 6:26,026,815...26,027,252
JBrowse link
G H4C3 H4 clustered histone 3 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,103,933...26,104,337
Ensembl chr 6:26,103,876...26,104,310
Ensembl chr 6:26,103,876...26,104,310
JBrowse link
G H4C4 H4 clustered histone 4 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,188,710...26,189,112
Ensembl chr 6:26,188,765...26,189,076
Ensembl chr 6:26,188,765...26,189,076
JBrowse link
G H4C5 H4 clustered histone 5 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,204,610...26,205,021
Ensembl chr 6:26,204,552...26,206,038
JBrowse link
G H4C6 H4 clustered histone 6 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,240,393...26,240,793
Ensembl chr 6:26,240,426...26,240,737
Ensembl chr 6:26,240,426...26,240,737
JBrowse link
G H4C8 H4 clustered histone 8 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:26,285,126...26,285,534
Ensembl chr 6:26,277,609...26,285,638
JBrowse link
G H4C9 H4 clustered histone 9 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:27,139,282...27,139,678
Ensembl chr 6:27,138,588...27,139,881
JBrowse link
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 TAS Reactome Reactome:R-HSA-5693571 NCBI chr15:28,111,040...28,322,179
Ensembl chr15:28,111,040...28,322,172
Ensembl chr15:28,111,040...28,322,172
JBrowse link
G KAT5 lysine acetyltransferase 5 TAS Reactome Reactome:R-HSA-5693571 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G KDM2A lysine demethylase 2A IMP (PMID:21187428) UniProtKB PMID:21187428 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G LIG1 DNA ligase 1 ISO (MGI:MGI:5014103|PMID:21655080) MGI PMID:21655080 MGI:MGI:5014103 NCBI chr19:48,115,445...48,170,595
Ensembl chr19:48,115,445...48,170,603
JBrowse link
G LIG3 DNA ligase 3 ISO (MGI:MGI:5014103|PMID:21655080) MGI PMID:21655080 MGI:MGI:5014103 NCBI chr17:34,980,504...35,009,743
Ensembl chr17:34,980,512...35,009,743
JBrowse link
G LIG4 DNA ligase 4 TAS
IBA
ISS
IDA
IMP
IGI
(PMID:21873635)
(PMID:12517771)
(PMID:9809069)
(PMID:23275564)
Reactome
GO_Central
BHF-UCL
UniProtKB
PMID:9809069, PMID:12517771, PMID:21873635, PMID:23275564 GO_REF:0000024, Reactome:R-HSA-5693571 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 6:30,699,807...30,717,988
Ensembl chr 6:30,699,807...30,717,447
JBrowse link
G MLH1 mutL homolog 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:36,993,487...37,050,846
Ensembl chr 3:36,993,350...37,050,846
Ensembl chr 3:36,993,350...37,050,846
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease IDA
IBA
TAS
(PMID:9651580)
(PMID:21873635)
CACAO
GO_Central
Reactome
PMID:9651580, PMID:21873635 Reactome:R-HSA-5693571 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G NBN nibrin TAS Reactome Reactome:R-HSA-5693571 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G NHEJ1 non-homologous end joining factor 1 TAS
IBA
IMP
(PMID:21873635)
(PMID:16439204), (PMID:16439205)
Reactome
GO_Central
UniProtKB
PMID:16439204, PMID:16439205, PMID:21873635 Reactome:R-HSA-5693571 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,357...219,160,865
Ensembl chr 2:219,069,357...219,160,865
JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 4:1,871,393...1,982,207
Ensembl chr 4:1,871,393...1,982,207
JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase NOT IMP (PMID:16810316) UniProtKB PMID:16810316 NCBI chr 8:125,091,779...125,367,125
Ensembl chr 8:125,091,679...125,367,120
JBrowse link
G PAXIP1 PAX interacting protein 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 7:154,943,690...155,003,419
Ensembl chr 7:154,943,687...155,003,124
JBrowse link
G PAXX PAXX non-homologous end joining factor IMP
IBA
(PMID:25574025), (PMID:25670504), (PMID:25941166)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:25574025, PMID:25670504, PMID:25941166 NCBI chr 9:136,992,422...136,993,976
Ensembl chr 9:136,992,422...136,993,984
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 TAS Reactome Reactome:R-HSA-5693571 NCBI chr19:4,007,736...4,039,386
Ensembl chr19:4,007,736...4,039,386
JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit IMP (PMID:11470886) UniProtKB PMID:11470886 NCBI chr  X:24,693,877...24,996,986
Ensembl chr  X:24,693,909...24,996,986
JBrowse link
G POLB DNA polymerase beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:42,338,452...42,371,810
Ensembl chr 8:42,338,454...42,371,808
JBrowse link
G POLL DNA polymerase lambda TAS
IBA
IMP
(PMID:21873635)
(PMID:19806195)
Reactome
GO_Central
UniProtKB
PMID:19806195, PMID:21873635 Reactome:R-HSA-5693571 NCBI chr10:101,578,882...101,588,319
Ensembl chr10:101,578,882...101,588,270
JBrowse link
G POLM DNA polymerase mu TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-5693571 NCBI chr 7:44,072,062...44,082,530
Ensembl chr 7:44,072,062...44,082,530
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit TAS Reactome Reactome:R-HSA-5693571 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
G PRPF19 pre-mRNA processing factor 19 IMP (PMID:18263876) UniProtKB PMID:18263876 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585
JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 IMP (PMID:22909820) UniProtKB PMID:22909820 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717
JBrowse link
G RAD50 RAD50 double strand break repair protein TAS Reactome Reactome:R-HSA-5693571 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RIF1 replication timing regulatory factor 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 2:151,409,902...151,534,200
Ensembl chr 2:151,409,883...151,508,013
JBrowse link
G RNF168 ring finger protein 168 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768
JBrowse link
G RNF8 ring finger protein 8 TAS
ISS
Reactome
UniProtKB
GO_REF:0000024, Reactome:R-HSA-5693571 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734
JBrowse link
G SETMAR SET domain and mariner transposase fusion gene IDA
IMP
(PMID:16332963)
(PMID:18263876), (PMID:21187428), (PMID:24573677)
UniProtKB PMID:16332963, PMID:18263876, PMID:21187428, PMID:24573677 NCBI chr 3:4,303,304...4,320,649
Ensembl chr 3:4,303,304...4,317,567
JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 IMP (PMID:26089390) CACAO PMID:26089390 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,414...216,483,053
JBrowse link
G SMC5 structural maintenance of chromosomes 5 NOT IMP (PMID:16810316) UniProtKB PMID:16810316 NCBI chr 9:70,258,962...70,354,873
Ensembl chr 9:70,258,978...70,354,873
JBrowse link
G SUMO1 small ubiquitin like modifier 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 2:202,206,171...202,238,597
Ensembl chr 2:202,206,180...202,238,608
Ensembl chr 2:202,206,180...202,238,608
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 TAS
IDA
(PMID:23333306), (PMID:23760478), (PMID:28241136) Reactome
UniProtKB
PMID:23333306, PMID:23760478, PMID:28241136 Reactome:R-HSA-5693571 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728
JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N TAS Reactome Reactome:R-HSA-5693571 NCBI chr12:93,405,684...93,442,336
Ensembl chr12:93,405,673...93,441,947
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 8:47,997,527...48,064,708
Ensembl chr 8:48,008,415...48,064,708
JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 TAS Reactome Reactome:R-HSA-5693571 NCBI chr 5:176,905,005...177,022,640
Ensembl chr 5:176,905,005...177,022,633
JBrowse link
G XRCC1 X-ray repair cross complementing 1 IEA Ensembl GO_REF:0000107 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,040...43,580,473
Ensembl chr19:43,543,040...43,580,473
JBrowse link
G XRCC4 X-ray repair cross complementing 4 TAS
IBA
IMP
IDA
NAS
(PMID:21873635)
(PMID:9809069)
(PMID:12517771)
(PMID:16439205)
Reactome
GO_Central
UniProtKB
PMID:9809069, PMID:12517771, PMID:16439205, PMID:21873635 Reactome:R-HSA-5693571 NCBI chr 5:83,077,534...83,370,333
Ensembl chr 5:83,077,498...83,353,787
JBrowse link
G XRCC5 X-ray repair cross complementing 5 IMP
IBA
TAS
IDA
(PMID:20383123)
(PMID:21873635)
(PMID:15824061)
(PMID:26359349)
UniProtKB
GO_Central
BHF-UCL
PMID:15824061, PMID:20383123, PMID:21873635, PMID:26359349 Reactome:R-HSA-5693571 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303
JBrowse link
G XRCC6 X-ray repair cross complementing 6 IEA
IBA
TAS
IMP
(PMID:21873635)
(PMID:15824061)
(PMID:20383123), (PMID:26359349)
InterPro
GO_Central
BHF-UCL
UniProtKB
PMID:15824061, PMID:20383123, PMID:21873635, PMID:26359349 GO_REF:0000002, Reactome:R-HSA-5693571 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
Ensembl chr22:41,621,163...41,664,048
JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD52 RAD52 homolog, DNA repair protein IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr12:911,028...991,195
Ensembl chr12:911,736...990,053
JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FANCM FA complementation group M IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:45,135,930...45,200,890
Ensembl chr14:45,135,930...45,200,890
JBrowse link
G RAD54L RAD54 like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G XRCC3 X-ray repair cross complementing 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:103,697,611...103,715,486
Ensembl chr14:103,697,609...103,715,504
JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UBE2V1 ubiquitin conjugating enzyme E2 V1 ISO (MGI:MGI:2136126|PMID:11406273) MGI PMID:11406273 MGI:MGI:2136126 NCBI chr20:50,081,124...50,115,957
Ensembl chr20:50,081,124...50,115,959
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 IEA Ensembl GO_REF:0000107 NCBI chr 8:47,997,527...48,064,708
Ensembl chr 8:48,008,415...48,064,708
JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPLOC4 NPL4 homolog, ubiquitin recognition factor TAS Reactome Reactome:R-HSA-110320 NCBI chr17:81,556,885...81,637,148
Ensembl chr17:81,556,887...81,648,465
JBrowse link
G PCNA proliferating cell nuclear antigen TAS Reactome Reactome:R-HSA-110320 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit IDA (PMID:24191025) UniProt PMID:24191025 NCBI chr19:50,384,291...50,418,018
Ensembl chr19:50,384,204...50,418,018
JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 IDA
IBA
(PMID:24191025)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:24191025 NCBI chr17:28,346,633...28,357,527
Ensembl chr17:28,346,633...28,357,527
JBrowse link
G POLH DNA polymerase eta TAS Reactome Reactome:R-HSA-110320 NCBI chr 6:43,576,147...43,620,523
Ensembl chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523
JBrowse link
G RCHY1 ring finger and CHY zinc finger domain containing 1 TAS Reactome Reactome:R-HSA-110320 NCBI chr 4:75,479,037...75,515,057
Ensembl chr 4:75,479,037...75,514,764
JBrowse link
G REV1 REV1 DNA directed polymerase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:99,400,477...99,490,123
Ensembl chr 2:99,400,475...99,490,035
JBrowse link
G RFC1 replication factor C subunit 1 TAS Reactome Reactome:R-HSA-110320 NCBI chr 4:39,287,456...39,366,381
Ensembl chr 4:39,287,456...39,366,375
JBrowse link
G RFC2 replication factor C subunit 2 TAS Reactome Reactome:R-HSA-110320 NCBI chr 7:74,231,502...74,254,452
Ensembl chr 7:74,231,499...74,254,458
JBrowse link
G RFC3 replication factor C subunit 3 TAS Reactome Reactome:R-HSA-110320 NCBI chr13:33,818,075...33,973,946
Ensembl chr13:33,818,069...33,966,558
JBrowse link
G RFC4 replication factor C subunit 4 TAS Reactome Reactome:R-HSA-110320 NCBI chr 3:186,789,900...186,806,482
Ensembl chr 3:186,789,880...186,807,058
JBrowse link
G RFC5 replication factor C subunit 5 TAS Reactome Reactome:R-HSA-110320 NCBI chr12:118,016,661...118,033,564
Ensembl chr12:118,013,588...118,033,130
JBrowse link
G RPA1 replication protein A1 TAS Reactome Reactome:R-HSA-110320 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G RPA2 replication protein A2 TAS Reactome Reactome:R-HSA-110320 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746
JBrowse link
G RPA3 replication protein A3 TAS Reactome Reactome:R-HSA-110320 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607
JBrowse link
G RPS27A ribosomal protein S27a TAS Reactome Reactome:R-HSA-110320 NCBI chr 2:55,231,903...55,235,853
Ensembl chr 2:55,231,903...55,235,853
JBrowse link
G SPRTN SprT-like N-terminal domain TAS Reactome Reactome:R-HSA-110320 NCBI chr 1:231,337,980...231,355,023
Ensembl chr 1:231,337,104...231,355,023
JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 TAS Reactome Reactome:R-HSA-110320 NCBI chr19:18,563,766...18,577,550
Ensembl chr19:18,571,730...18,577,550
JBrowse link
G UBB ubiquitin B TAS Reactome Reactome:R-HSA-110320 NCBI chr17:16,380,779...16,382,745
Ensembl chr17:16,380,798...16,382,745
JBrowse link
G UBC ubiquitin C TAS Reactome Reactome:R-HSA-110320 NCBI chr12:124,911,646...124,914,650
Ensembl chr12:124,911,604...124,917,368
JBrowse link
G UFD1 ubiquitin recognition factor in ER associated degradation 1 TAS Reactome Reactome:R-HSA-110320 NCBI chr22:19,449,911...19,479,193
Ensembl chr22:19,449,911...19,479,202
JBrowse link
G VCP valosin containing protein TAS Reactome Reactome:R-HSA-110320 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,056,064...35,072,627
JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 TAS Reactome Reactome:R-HSA-110312, Reactome:R-HSA-5655862, Reactome:R-HSA-5656121 NCBI chr 1:11,674,480...11,691,559
Ensembl chr 1:11,674,480...11,691,650
JBrowse link
G PCNA proliferating cell nuclear antigen TAS Reactome Reactome:R-HSA-110312, Reactome:R-HSA-5655862, Reactome:R-HSA-5656121 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit I