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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA repair
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Accession:GO:0006281 term browser browse the term
Definition:The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Synonyms:xref: Wikipedia:DNA_repair


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DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030926.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr10:109,891,383...109,891,879 JBrowse link
G AABR07052430.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 3:52,997,922...52,998,650 JBrowse link
G Adprs ADP-ribosylserine hydrolase ISO (PMID:30045870) RGD PMID:30045870 NCBI chr 5:144,336,312...144,341,586
Ensembl chr 5:144,336,312...144,341,586
JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase ISO (PMID:18603530), (PMID:19959401) RGD PMID:18603530, PMID:19959401 NCBI chr 6:111,456,096...111,476,829
Ensembl chr 6:111,456,187...111,477,090
JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase ISO
ISS
(PMID:16858410)
GO_REF:0000024
RGD
UniProt
PMID:16858410 GO_REF:0000024 NCBI chr 3:82,874,242...82,907,467
Ensembl chr 3:82,874,248...82,906,581
JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT ISO (MGI:MGI:5800654|PMID:27010503) RGD PMID:27010503 MGI:MGI:5800654 NCBI chr16:19,799,943...19,826,057
Ensembl chr16:19,800,463...19,803,796
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:22,665,128...22,676,079
Ensembl chr12:22,665,112...22,676,075
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO
ISS
(PMID:9560228)
GO_REF:0000024
RGD
UniProt
PMID:9560228 GO_REF:0000024 NCBI chr15:27,849,943...27,852,083
Ensembl chr15:27,849,979...27,852,082
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO (PMID:11897662) RGD PMID:11897662 NCBI chr20:34,894,419...34,909,265
Ensembl chr20:34,894,419...34,909,265
JBrowse link
G Atm ATM serine/threonine kinase ISO MGI:MGI:1857132|MGI:MGI:2155399 (MGI:MGI:2156121|PMID:11679583), (MGI:MGI:3053255|PMID:15364958), (MGI:MGI:3511081|PMID:15542845) RGD PMID:11679583, PMID:15364958, PMID:15542845 MGI:MGI:2156121, MGI:MGI:3053255, MGI:MGI:3511081 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Atr ATR serine/threonine kinase ISO (MGI:MGI:3053255|PMID:15364958) RGD PMID:15364958 MGI:MGI:3053255 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Atrip ATR interacting protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,797,954...117,811,989
Ensembl chr 8:117,797,842...117,811,975
JBrowse link
G Atrx ATRX, chromatin remodeler IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Bach1 BTB domain and CNC homolog 1 ISO (PMID:11301010) RGD PMID:11301010 NCBI chr11:27,364,913...27,398,713
Ensembl chr11:27,364,916...27,398,842
JBrowse link
G Bard1 BRCA1 associated RING domain 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:78,297,723...78,368,777
Ensembl chr 9:78,294,834...78,369,031
JBrowse link
G Blm BLM RecQ like helicase ISO
IBA
(MGI:MGI:3053255|PMID:15364958)
PMID:21873635
RGD PMID:15364958, PMID:21873635 MGI:MGI:3053255, RGD:13792537 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Cdc5l cell division cycle 5-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
JBrowse link
G Cdk2 cyclin dependent kinase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk7 cyclin-dependent kinase 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:30,710,642...30,735,522
Ensembl chr 2:30,710,643...30,735,514
JBrowse link
G Cdk9 cyclin-dependent kinase 9 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113
JBrowse link
G Cenps centromere protein S ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:165,946,106...165,955,723 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:11,000,869...11,027,631
Ensembl chr 9:11,001,129...11,027,506
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:199,714,044...199,792,270
Ensembl chr 2:199,716,713...199,771,896
JBrowse link
G Chek1 checkpoint kinase 1 ISO (MGI:MGI:3053255|PMID:15364958)
(PMID:19716789)
RGD PMID:15364958, PMID:19716789 MGI:MGI:3053255 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit IEA
ISO
GO_REF:0000107
(PMID:16332175)
Ensembl
RGD
PMID:16332175 GO_REF:0000107 NCBI chr 3:176,533,182...176,547,965
Ensembl chr 3:176,527,516...176,548,208
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 TAS RGD PMID:12145536 RGD:632554 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ddb2 damage specific DNA binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:80,030,437...80,052,984
Ensembl chr 3:80,030,437...80,052,953
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:136,533,791...136,541,795
Ensembl chr 5:136,533,792...136,541,795
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,786,105...11,824,742
Ensembl chr 7:11,786,105...11,824,742
JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:26,651,241...26,758,330
Ensembl chr 8:26,652,121...26,758,325
JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:26,976,154...26,977,479 JBrowse link
G Endov endonuclease V ISO (MGI:MGI:5009179|PMID:12853604) RGD PMID:12853604 MGI:MGI:5009179 NCBI chr10:108,630,723...108,646,679
Ensembl chr10:108,630,823...108,646,677
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO MGI:MGI:2158940 (MGI:MGI:2446381|PMID:12466203)
(PMID:25538220)
RGD PMID:12466203, PMID:25538220 MGI:MGI:2446381 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO MGI:MGI:2183949 (MGI:MGI:2179786|PMID:11950998) RGD PMID:11950998 MGI:MGI:2179786 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO (PMID:2167179) RGD PMID:2167179 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO MGI:MGI:3028660 (MGI:MGI:3027419|PMID:14729965)
UniProtKB:Q15554 (PMID:17055345), (PMID:19596235)
RGD PMID:14729965, PMID:17055345, PMID:19596235 MGI:MGI:3027419 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO MGI:MGI:3043589 (MGI:MGI:3041918|PMID:15082767) RGD PMID:15082767 MGI:MGI:3041918 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:MGI:1097693|MGI:MGI:1932102 (MGI:MGI:1861042|PMID:10806208), (MGI:MGI:3715683|PMID:17213818), (MGI:MGI:3759387|PMID:12447686)
(PMID:26218421)
RGD PMID:10806208, PMID:12447686, PMID:17213818, PMID:26218421 MGI:MGI:1861042, MGI:MGI:3715683, MGI:MGI:3759387 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:162,285,275...162,470,642
Ensembl chr 3:162,346,490...162,470,065
JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:23,237,617...23,611,580
Ensembl chr 1:23,409,408...23,610,164
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 ISO (PMID:20603073) RGD PMID:20603073 NCBI chr 1:125,182,117...125,209,772
Ensembl chr 1:125,181,838...125,209,727
JBrowse link
G Fancd2 FA complementation group D2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:145,489,869...145,551,479
Ensembl chr 4:145,489,869...145,551,479
JBrowse link
G Fanci FA complementation group I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:141,116,565...141,172,997
Ensembl chr 1:141,120,166...141,172,483
JBrowse link
G Fancl FA complementation group L ISO
IBA
(PMID:16916645)
PMID:21873635
RGD PMID:16916645, PMID:21873635 RGD:13792537 NCBI chr14:110,675,306...110,740,880
Ensembl chr14:110,676,090...110,740,317
JBrowse link
G Fbh1 F-box DNA helicase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Fbxo6 F-box protein 6 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:164,956,285...164,962,075
Ensembl chr 5:164,956,280...164,959,851
JBrowse link
G Fen1 flap structure-specific endonuclease 1 ISO MGI:MGI:2670036 (MGI:MGI:2668283|PMID:12861020) RGD PMID:12861020 MGI:MGI:2668283 NCBI chr 1:226,251,516...226,256,160
Ensembl chr 1:226,251,518...226,255,886
JBrowse link
G Fh fumarate hydratase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:93,651,486...93,677,371
Ensembl chr13:93,651,484...93,677,377
JBrowse link
G Foxm1 forkhead box M1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:161,685,236...161,697,633
Ensembl chr 4:161,685,258...161,696,305
JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,849,618...102,877,939
Ensembl chr 1:102,849,889...102,877,944
JBrowse link
G H2ax H2A.X variant histone ISO MGI:MGI:2156048 (MGI:MGI:2179182|PMID:11934988), (MGI:MGI:3053255|PMID:15364958) RGD PMID:11934988, PMID:15364958 MGI:MGI:2179182, MGI:MGI:3053255 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Hdac10 histone deacetylase 10 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:130,102,335...130,109,036
Ensembl chr 7:130,102,347...130,107,437
JBrowse link
G Hdac9 histone deacetylase 9 ISO MGI:MGI:1890508 (MGI:MGI:5139938|PMID:21746928) RGD PMID:21746928 MGI:MGI:5139938 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Hinfp histone H4 transcription factor ISO (PMID:17974976) RGD PMID:17974976 NCBI chr 8:48,626,398...48,638,012
Ensembl chr 8:48,628,340...48,634,797
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO MGI:MGI:3028843 (MGI:MGI:3027215|PMID:14701760) RGD PMID:14701760 MGI:MGI:3027215 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Inip INTS3 and NABP interacting protein ISO
IBA
(PMID:19605351)
PMID:21873635
RGD PMID:19605351, PMID:21873635 RGD:13792537 NCBI chr 5:77,016,871...77,031,106
Ensembl chr 5:77,019,431...77,031,120
JBrowse link
G Ino80 INO80 complex ATPase subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Ino80c INO80 complex subunit C IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,995,005...16,009,639
Ensembl chr18:15,995,000...16,009,710
JBrowse link
G Ino80e INO80 complex subunit E IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:198,287,489...198,298,076
Ensembl chr 1:198,287,490...198,298,076
JBrowse link
G Ints3 integrator complex subunit 3 ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351, PMID:19683501 NCBI chr 2:189,766,927...189,818,327
Ensembl chr 2:189,766,735...189,818,224
JBrowse link
G Kat7 lysine acetyltransferase 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:83,095,067...83,128,342
Ensembl chr10:83,095,068...83,128,297
JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 TAS PMID:15726626 UniProt PMID:15726626 RGD:1357162 NCBI chr 1:198,360,627...198,378,935
Ensembl chr 1:198,360,627...198,378,934
JBrowse link
G Kif1b kinesin family member 1B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif22 kinesin family member 22 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:198,461,406...198,476,430
Ensembl chr 1:198,461,169...198,476,476
JBrowse link
G Kmt5b lysine methyltransferase 5B ISO
ISS
(PMID:28114273)
GO_REF:0000024
RGD
UniProt
PMID:28114273 GO_REF:0000024 NCBI chr 1:219,000,844...219,050,211
Ensembl chr 1:219,000,844...219,050,211
JBrowse link
G Kmt5c lysine methyltransferase 5C ISO
ISS
(PMID:28114273)
GO_REF:0000024
RGD
UniProt
PMID:28114273 GO_REF:0000024 NCBI chr 1:72,666,662...72,674,271
Ensembl chr 1:72,666,665...72,674,271
JBrowse link
G Lig1 DNA ligase 1 NOT IDA
ISO
(MGI:MGI:4943978|PMID:21390131)
MGI:MGI:2179196 (MGI:MGI:2178155|PMID:11896201)
RGD PMID:11896201, PMID:21390131, PMID:1730240 MGI:MGI:2178155, MGI:MGI:4943978, RGD:724410 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Lig4 DNA ligase 4 ISO MGI:MGI:1857732 (MGI:MGI:3037169|PMID:11779495), (MGI:MGI:4943978|PMID:21390131) RGD PMID:11779495, PMID:21390131 MGI:MGI:3037169, MGI:MGI:4943978 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G LOC100911807 ATR-interacting protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,428,032...118,437,999
Ensembl chr 8:118,428,289...118,436,894
JBrowse link
G LOC103694506 ubiquitin-conjugating enzyme E2 W IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:119,160,964...119,178,031
Ensembl chr  X:119,160,959...119,162,518
JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:147,744,673...147,756,462
Ensembl chr 4:147,746,186...147,756,294
JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,405,017...3,419,831
Ensembl chr20:3,404,711...3,419,831
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO
IBA
(MGI:MGI:2677087|PMID:13679151)
PMID:21873635
RGD PMID:13679151, PMID:21873635 MGI:MGI:2677087, RGD:13792537 NCBI chr 1:209,237,255...209,464,189
Ensembl chr 1:209,237,233...209,464,190
JBrowse link
G Mlh1 mutL homolog 1 ISO MGI:MGI:1858054|MGI:MGI:1930998 (MGI:MGI:2677087|PMID:13679151), (MGI:MGI:3513725|PMID:15480418) RGD PMID:13679151, PMID:15480418 MGI:MGI:2677087, MGI:MGI:3513725 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component ISO (PMID:22678362) RGD PMID:22678362 NCBI chr 1:261,191,646...261,229,070
Ensembl chr 1:261,191,646...261,229,046
JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,995,341...96,153,331
Ensembl chr 6:96,007,805...96,153,330
JBrowse link
G Morf4l2 mortality factor 4 like 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,394,468...107,405,564
Ensembl chr  X:107,394,486...107,405,564
JBrowse link
G Msh2 mutS homolog 2 ISO (PMID:8942985)
(MGI:MGI:2667543|PMID:12687013)
RGD PMID:8942985, PMID:12687013 MGI:MGI:2667543 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh3 mutS homolog 3 ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:21,790,048...21,931,791
Ensembl chr 2:21,790,044...21,931,720
JBrowse link
G Msh6 mutS homolog 6 ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit ISO (PMID:19596235) RGD PMID:19596235 NCBI chr 1:220,862,474...220,867,973
Ensembl chr 1:220,862,386...220,867,815
JBrowse link
G Mutyh mutY DNA glycosylase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Nabp1 nucleic acid binding protein 1 ISO
ISS
(PMID:19683501)
GO_REF:0000024
RGD
UniProt
PMID:19683501 GO_REF:0000024 NCBI chr 9:55,049,893...55,057,784
Ensembl chr 9:55,050,203...55,057,658
JBrowse link
G Nabp2 nucleic acid binding protein 2 ISO
ISS
(MGI:MGI:5629774|PMID:25589350)
(PMID:18449195), (PMID:19683501)
GO_REF:0000024
RGD
UniProt
PMID:18449195, PMID:19683501, PMID:25589350 GO_REF:0000024, MGI:MGI:5629774 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISO (MGI:MGI:2389521|PMID:12200441) RGD PMID:12200441 MGI:MGI:2389521 NCBI chr 8:61,817,258...61,824,023
Ensembl chr 8:61,817,258...61,823,102
JBrowse link
G Nono non-POU domain containing, octamer-binding IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:71,324,365...71,342,225
Ensembl chr  X:71,324,365...71,342,225
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:21741933) RGD PMID:21741933 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Npm1 nucleophosmin 1 ISO
ISS
(PMID:19188445)
GO_REF:0000024
RGD
UniProt
PMID:19188445 GO_REF:0000024 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:196,857,490...196,883,907
Ensembl chr 1:196,857,461...196,884,302
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:125,663,987...125,665,314 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,103,750...201,110,838
Ensembl chr 1:201,096,059...201,110,928
JBrowse link
G Nudt1 nudix hydrolase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO MGI:MGI:1100494|MGI:MGI:2386212|MGI:MGI:2386943 (MGI:MGI:2150199|PMID:11532868), (MGI:MGI:2668786|PMID:12874039), (MGI:MGI:3715683|PMID:17213818), (MGI:MGI:3759387|PMID:12447686) RGD PMID:11532868, PMID:12447686, PMID:12874039, PMID:17213818 MGI:MGI:2150199, MGI:MGI:2668786, MGI:MGI:3715683, MGI:MGI:3759387 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:222,451,674...222,459,952
Ensembl chr 1:222,451,674...222,459,952
JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:198,448,790...198,451,078
Ensembl chr 1:198,449,040...198,450,688
JBrowse link
G Park7 Parkinsonism associated deglycase ISO
IEA
ISS
(PMID:28596309)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28596309 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Parpbp PARP1 binding protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:28,654,707...28,724,412
Ensembl chr 7:28,654,707...28,715,224
JBrowse link
G Pds5a PDS5 cohesin associated factor A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:44,185,445...44,282,308
Ensembl chr14:44,185,446...44,280,079
JBrowse link
G Pds5b PDS5 cohesin associated factor B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:659,995...794,042
Ensembl chr12:660,011...794,042
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO MGI:MGI:1857947 (MGI:MGI:3513725|PMID:15480418) RGD PMID:15480418 MGI:MGI:3513725 NCBI chr12:12,714,394...12,738,654
Ensembl chr12:12,714,394...12,738,641
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO
IBA
UniProtKB:J7Q8E6|UniProtKB:J7QRV0 (PMID:10446192)
PMID:21873635
RGD PMID:10446192, PMID:21873635 RGD:13792537 NCBI chr 1:100,853,475...100,859,202
Ensembl chr 1:100,853,902...100,859,084
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT ISO
ISS
(PMID:3335506)
(PMID:11470886)
GO_REF:0000024
RGD
UniProt
PMID:3335506, PMID:11470886 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:86,111,416...86,117,578
Ensembl chr14:86,111,294...86,117,578
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259
JBrowse link
G Polk DNA polymerase kappa ISO MGI:MGI:2445458 (MGI:MGI:2445277|PMID:12555660)
(PMID:28297716)
RGD PMID:12555660, PMID:28297716 MGI:MGI:2445277 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Polq DNA polymerase theta ISO MGI:MGI:107202|MGI:MGI:2656007 (MGI:MGI:2654407|PMID:12663541), (MGI:MGI:3511081|PMID:15542845) RGD PMID:12663541, PMID:15542845 MGI:MGI:2654407, MGI:MGI:3511081 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Psme4 proteasome activator subunit 4 ISO (MGI:MGI:5494329|PMID:23706739) RGD PMID:23706739 MGI:MGI:5494329 NCBI chr14:115,166,165...115,269,041
Ensembl chr14:115,166,416...115,269,056
JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:29,014,332...29,026,088
Ensembl chr10:29,020,049...29,026,002
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor ISO
IBA
ISS
(PMID:20347427)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20347427, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:12,331,288...12,348,263
Ensembl chr 7:12,331,416...12,346,475
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,461,513...60,469,646
Ensembl chr 2:60,461,551...60,469,685
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:30,634,353...30,664,618
Ensembl chr 2:30,634,354...30,664,163
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO
IEA
ISS
(PMID:9705271)
GO_REF:0000043
GO_REF:0000024
RGD
UniProt
PMID:9705271 GO_REF:0000024, GO_REF:0000043 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad51c RAD51 paralog C ISO
IBA
(PMID:19451272)
PMID:21873635
RGD PMID:19451272, PMID:21873635 RGD:13792537 NCBI chr10:74,697,713...74,724,004
Ensembl chr10:74,697,716...74,724,472
JBrowse link
G Rad9a RAD9 checkpoint clamp component A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,443,347...219,450,574
Ensembl chr 1:219,444,092...219,450,451
JBrowse link
G Rad9b RAD9 checkpoint clamp component B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,699,076...39,731,218
Ensembl chr12:39,699,181...39,729,516
JBrowse link
G Rbm17 RNA binding motif protein 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:70,586,345...70,603,289
Ensembl chr17:70,586,394...70,603,267
JBrowse link
G Recql RecQ like helicase IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:176,581,892...176,606,520
Ensembl chr 4:176,581,897...176,606,382
JBrowse link
G Recql4 RecQ like helicase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Recql5 RecQ like helicase 5 ISO
IBA
ISS
(PMID:22973052)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22973052, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit ISO MGI:MGI:2183197 (MGI:MGI:2176643|PMID:11884603) RGD PMID:11884603 MGI:MGI:2176643 NCBI chr20:44,803,664...44,961,362
Ensembl chr20:44,803,666...44,961,382
JBrowse link
G Rfc1 replication factor C subunit 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:44,627,528...44,702,205
Ensembl chr14:44,580,216...44,702,203
JBrowse link
G Rfc2 replication factor C subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:25,130,375...25,143,480
Ensembl chr12:25,130,377...25,143,480
JBrowse link
G Rfc3 replication factor C subunit 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:1,460,581...1,471,344
Ensembl chr12:1,460,538...1,471,357
JBrowse link
G Rfc4 replication factor C subunit 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:81,358,592...81,373,044
Ensembl chr11:81,358,592...81,373,043
JBrowse link
G Rfc5 replication factor C subunit 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:44,931,494...44,941,051
Ensembl chr12:44,931,494...44,941,324
JBrowse link
G RGD1560831 similar to 40S ribosomal protein S3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:52,997,847...52,998,669 JBrowse link
G RGD1564855 similar to RuvB-like protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,854,580...1,856,333
Ensembl chr  X:1,854,751...1,856,258
JBrowse link
G Rmi2 RecQ mediated genome instability 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:4,904,458...4,910,339
Ensembl chr10:4,905,210...4,910,305
JBrowse link
G Rpa1 replication protein A1 ISO
IBA
(PMID:18469000)
PMID:21873635
RGD PMID:18469000, PMID:21873635 RGD:13792537 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rpa2 replication protein A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:150,957,041...150,967,597
Ensembl chr 5:150,957,001...150,968,269
JBrowse link
G Rpain RPA interacting protein ISO UniProtKB:P27694 (PMID:16135809) RGD PMID:16135809 NCBI chr10:57,606,287...57,613,834
Ensembl chr10:57,606,650...57,613,747
JBrowse link
G Rps3 ribosomal protein S3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:164,435,868...164,441,167
Ensembl chr 1:164,435,878...164,441,167
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B ISO MGI:MGI:2672883 (MGI:MGI:2670318|PMID:12858174) RGD PMID:12858174 MGI:MGI:2670318 NCBI chr 7:76,750,045...76,780,817
Ensembl chr 7:76,750,050...76,780,817
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,411,917...120,447,458
Ensembl chr 4:120,411,991...120,447,455
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Sirt7 sirtuin 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:109,796,046...109,802,821
Ensembl chr10:109,796,020...109,802,739
JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit ISO (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) RGD PMID:19595721, PMID:19595722, PMID:19596235, PMID:19596236 NCBI chr 1:198,114,514...198,120,061
Ensembl chr 1:198,112,245...198,120,061
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit ISO (PMID:19595722) RGD PMID:19595722 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:79,943,775...79,990,230
Ensembl chr 9:79,944,132...79,990,229
JBrowse link
G Smc1a structural maintenance of chromosomes 1A IEA GO_REF:0000002
GO_REF:0000043
InterPro
UniProt
GO_REF:0000002, GO_REF:0000043 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 IDA RGD PMID:12718542 RGD:2317001 NCBI chr 7:144,774,155...144,788,333
Ensembl chr 7:144,774,160...144,778,656
JBrowse link
G Sprtn SprT-like N-terminal domain IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:57,649,901...57,657,158
Ensembl chr19:57,650,163...57,654,864
JBrowse link
G Ssrp1 structure specific recognition protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:72,447,516...72,457,621
Ensembl chr 3:72,447,537...72,457,649
JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr15:28,574,841...28,611,959
Ensembl chr15:28,575,480...28,611,946
JBrowse link
G Taok1 TAO kinase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:62,542,870...62,630,341
Ensembl chr10:62,566,732...62,630,155
JBrowse link
G Taok3 TAO kinase 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:45,037,951...45,116,593
Ensembl chr12:45,037,883...45,182,974
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 ISO (MGI:MGI:4943978|PMID:21390131)
(PMID:17948061)
RGD PMID:17948061, PMID:21390131 MGI:MGI:4943978 NCBI chr 6:123,895,860...123,963,688
Ensembl chr 6:123,897,956...123,963,675
JBrowse link
G Tfpt TCF3 fusion partner IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:64,162,525...64,172,307
Ensembl chr 1:64,162,672...64,172,470
JBrowse link
G Timeless timeless circadian regulator IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Tnfaip1 TNF alpha induced protein 1 TAS PMID:15726626 UniProt PMID:15726626 RGD:1357162 NCBI chr10:65,791,002...65,805,693
Ensembl chr10:65,791,003...65,805,693
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO (MGI:MGI:3053255|PMID:15364958) RGD PMID:15364958 MGI:MGI:3053255 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Trex2 three prime repair exonuclease 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:157,374,305...157,375,913
Ensembl chr  X:157,374,305...157,375,913
JBrowse link
G Trim28 tripartite motif-containing 28 ISO (PMID:17178852) RGD PMID:17178852 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:92,305,059...92,435,388
Ensembl chr 9:92,305,051...92,435,365
JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:27,698,375...27,715,970
Ensembl chr15:27,698,362...27,716,008
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A ISO
IBA
UniProtKB:P06104 (PMID:1717990)
PMID:21873635
RGD PMID:1717990, PMID:21873635 RGD:13792537 NCBI chr  X:123,486,988...123,497,726
Ensembl chr  X:123,486,989...123,497,726
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO
IBA
UniProtKB:P06104 (PMID:1717990)
PMID:21873635
RGD PMID:1717990, PMID:21873635 RGD:13792537 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:240,626,198...240,655,874
Ensembl chr 2:240,627,436...240,655,246
JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T ISO (PMID:16916645) RGD PMID:16916645 NCBI chr13:51,790,877...51,801,379
Ensembl chr13:51,795,867...51,801,163
JBrowse link
G Ube2u ubiquitin conjugating enzyme E2 U IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:118,574,647...118,642,810
Ensembl chr 5:118,574,801...118,642,863
JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:29,798,845...29,812,777 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
G Ufl1 Ufm1-specific ligase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:39,616,479...39,650,894
Ensembl chr 5:39,615,956...39,650,895
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:10,738,211...10,758,403
Ensembl chr 9:10,738,222...10,757,954
JBrowse link
G Ung uracil-DNA glycosylase TAS RGD PMID:12167490 RGD:634481 NCBI chr12:48,246,593...48,255,547
Ensembl chr12:48,246,569...48,254,822
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase ISO (PMID:16488880) RGD PMID:16488880 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
G Usp1 ubiquitin specific peptidase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:117,583,502...117,594,872
Ensembl chr 5:117,583,502...117,594,870
JBrowse link
G Usp10 ubiquitin specific peptidase 10 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:52,566,274...52,608,820
Ensembl chr19:52,566,607...52,608,817
JBrowse link
G Usp28 ubiquitin specific peptidase 28 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:53,295,188...53,355,572
Ensembl chr 8:53,295,222...53,355,572
JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:72,207,970...72,284,871
Ensembl chr 8:72,207,972...72,284,873
JBrowse link
G Usp45 ubiquitin specific peptidase 45 ISO (PMID:25538220) RGD PMID:25538220 NCBI chr 5:35,916,763...35,984,525
Ensembl chr 5:35,916,804...35,984,524
JBrowse link
G Uvrag UV radiation resistance associated ISO (PMID:22542840)
(MGI:MGI:5644018|PMID:22542840)
RGD PMID:22542840 MGI:MGI:5644018 NCBI chr 1:163,844,804...164,101,568
Ensembl chr 1:163,844,818...164,101,578
JBrowse link
G Vcp valosin-containing protein ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,021,674...24,056,073
Ensembl chr15:24,021,674...24,056,073
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:56,169,024...56,185,800
Ensembl chr10:56,169,025...56,185,857
JBrowse link
G Wrn WRN RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO (PMID:1601884)
MGI:MGI:1857939 (MGI:MGI:1270007|PMID:9661901), (MGI:MGI:2179786|PMID:11950998)
RGD PMID:1601884, PMID:9661901, PMID:11950998 MGI:MGI:1270007, MGI:MGI:2179786 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO MGI:MGI:1859840 (MGI:MGI:2445277|PMID:12555660) RGD PMID:12555660 MGI:MGI:2445277 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO MGI:MGI:3836442 (MGI:MGI:4359093|PMID:19633665) RGD PMID:19633665 MGI:MGI:4359093 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 6:136,366,917...136,380,751
Ensembl chr 6:136,371,555...136,379,348
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:99,401,775...99,425,739
Ensembl chr 6:99,402,360...99,424,019
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:1931221|MGI:MGI:2180033 (MGI:MGI:3583382|PMID:15980864), (MGI:MGI:5139938|PMID:21746928) RGD PMID:15980864, PMID:21746928 MGI:MGI:3583382, MGI:MGI:5139938 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 ISO
IBA
(PMID:22759634)
PMID:21873635
RGD PMID:22759634, PMID:21873635 RGD:13792537 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07018191.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:46,296,206...46,297,243 JBrowse link
G AC095390.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:51,965,417...51,965,779 JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO
IBA
(PMID:8932386)
PMID:21873635
RGD PMID:8932386, PMID:21873635 RGD:13792537 NCBI chr15:27,849,943...27,852,083
Ensembl chr15:27,849,979...27,852,082
JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,146,085...23,166,676
Ensembl chr  X:23,146,085...23,166,675
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:9973627) RGD PMID:9973627 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Fen1 flap structure-specific endonuclease 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:226,251,516...226,256,160
Ensembl chr 1:226,251,518...226,255,886
JBrowse link
G Hmga1 high mobility group AT-hook 1 ISO
IBA
(PMID:19465398)
PMID:21873635
RGD PMID:19465398, PMID:21873635 RGD:13792537 NCBI chr20:7,132,501...7,140,155
Ensembl chr20:7,136,007...7,138,980
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
IBA
ISS
(PMID:19465398)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19465398, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:3722031|PMID:17803946) RGD PMID:17803946 MGI:MGI:3722031 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:19713937)
Ensembl
UniProt
RGD
PMID:19713937, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr  X:21,474,627...21,603,348
Ensembl chr  X:21,499,934...21,598,876
JBrowse link
G Lig1 DNA ligase 1 ISO (PMID:19589734) RGD PMID:19589734 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G LOC100362927 replication protein A3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,965,390...51,965,816 JBrowse link
G Mpg N-methylpurine-DNA glycosylase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:MGI:2148592|MGI:MGI:2675730 (MGI:MGI:2181327|PMID:9371767), (MGI:MGI:3028824|PMID:15177041)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:9371767, PMID:15177041, PMID:21873635 GO_REF:0000002, GO_REF:0000107, MGI:MGI:2181327, MGI:MGI:3028824, RGD:13792537 NCBI chr10:15,661,768...15,667,995
Ensembl chr10:15,661,608...15,668,022
JBrowse link
G Mutyh mutY DNA glycosylase IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISO
IBA
(PMID:17611195)
PMID:21873635
RGD PMID:17611195, PMID:21873635 RGD:13792537 NCBI chr 8:61,817,258...61,824,023
Ensembl chr 8:61,817,258...61,823,102
JBrowse link
G Neil2 nei-like DNA glycosylase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:46,371,780...46,382,730
Ensembl chr15:46,372,485...46,381,967
JBrowse link
G Neil3 nei-like DNA glycosylase 3 ISO
IBA
(PMID:23755964)
PMID:21873635
(MGI:MGI:4440390|PMID:20185759)
RGD PMID:20185759, PMID:23755964, PMID:21873635 MGI:MGI:4440390, RGD:13792537 NCBI chr16:41,079,444...41,138,505
Ensembl chr16:41,079,444...41,138,505
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IDA
ISO
MGI:MGI:2386943 (MGI:MGI:1349233|PMID:10570187), (MGI:MGI:894433|PMID:9207108) RGD PMID:9207108, PMID:10570187, PMID:9801319 MGI:MGI:1349233, MGI:MGI:894433, RGD:729091 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (MGI:MGI:2181257|PMID:11948190) RGD PMID:11948190 MGI:MGI:2181257 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 ISO (MGI:MGI:2181257|PMID:11948190) RGD PMID:11948190 MGI:MGI:2181257 NCBI chr15:27,739,416...27,749,650
Ensembl chr15:27,739,251...27,749,648
JBrowse link
G Polb DNA polymerase beta TAS
IBA
ISO
ISS
PMID:21873635
(PMID:16600869), (PMID:21362556)
GO_REF:0000024
RGD
UniProt
PMID:16600869, PMID:21362556, PMID:12388548, PMID:21873635 GO_REF:0000024, RGD:633643, RGD:13792537 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Polq DNA polymerase theta ISO (PMID:19188258) RGD PMID:19188258 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G RGD1564836 similar to HMGA1b IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:33,349,178...33,349,519
Ensembl chr  X:33,349,206...33,349,481
JBrowse link
G Rpa1 replication protein A1 ISO (PMID:9765279) RGD PMID:9765279 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rpa2 replication protein A2 NAS
ISS
ISO
GO_REF:0000024
(PMID:9765279)
UniProt
RGD
PMID:9765279, PMID:9045683 GO_REF:0000024, RGD:729744 NCBI chr 5:150,957,041...150,967,597
Ensembl chr 5:150,957,001...150,968,269
JBrowse link
G Rpa3 replication protein A3 ISO
IBA
(PMID:9765279)
PMID:21873635
RGD PMID:9765279, PMID:21873635 RGD:13792537 NCBI chr 4:34,279,320...34,282,351
Ensembl chr 4:34,279,320...34,282,351
JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:MGI:3663736|PMID:16439206) RGD PMID:16439206 MGI:MGI:3663736 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
G Slc25a16 solute carrier family 25 member 16 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ISO
IDA
(PMID:12161446)
PMID:12718543
RGD PMID:12161446, PMID:12718543 RGD:634191 NCBI chr 7:144,774,155...144,788,333
Ensembl chr 7:144,774,160...144,778,656
JBrowse link
G Tdg thymine-DNA glycosylase ISO (MGI:MGI:5287540|PMID:21817016)
(PMID:21862836), (PMID:22327402)
RGD PMID:21817016, PMID:21862836, PMID:22327402 MGI:MGI:5287540 NCBI chr 7:27,194,000...27,213,676
Ensembl chr 7:27,193,998...27,214,236
JBrowse link
G Ung uracil-DNA glycosylase IDA
ISO
TAS
(PMID:12161446) RGD PMID:12161446, PMID:12167490, PMID:11292851, PMID:15297456 RGD:634481, RGD:1599704, RGD:1599703 NCBI chr12:48,246,593...48,255,547
Ensembl chr12:48,246,569...48,254,822
JBrowse link
G Usp47 ubiquitin specific peptidase 47 ISO (PMID:21362556) RGD PMID:21362556 NCBI chr 1:176,854,589...176,937,763
Ensembl chr 1:176,854,653...176,937,763
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:17611195) RGD PMID:17611195 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 TAS
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:11056294, PMID:21873635, PMID:17412650 RGD:727220, RGD:13792537, RGD:2302580 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nthl1 nth-like DNA glycosylase 1 ISO
IBA
(PMID:15358233)
PMID:21873635
RGD PMID:15358233, PMID:21873635 RGD:13792537 NCBI chr10:13,996,660...14,002,827
Ensembl chr10:13,996,645...14,002,910
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Tdg thymine-DNA glycosylase ISO
IBA
(PMID:11889051), (PMID:18512959)
PMID:21873635
RGD PMID:11889051, PMID:18512959, PMID:21873635 RGD:13792537 NCBI chr 7:27,194,000...27,213,676
Ensembl chr 7:27,193,998...27,214,236
JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ung uracil-DNA glycosylase ISO
IBA
(PMID:18973764)
PMID:21873635
RGD PMID:18973764, PMID:21873635 RGD:13792537 NCBI chr12:48,246,593...48,255,547
Ensembl chr12:48,246,569...48,254,822
JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig3 DNA ligase 3 IDA
IBA
ISO
PMID:21873635
(PMID:19589734), (PMID:24674627)
RGD PMID:19589734, PMID:24674627, PMID:17412650, PMID:21873635 RGD:2302580, RGD:13792537 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen ISO (MGI:MGI:3045901|PMID:15177179) RGD PMID:15177179 MGI:MGI:3045901 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Polb DNA polymerase beta ISO
IDA
(MGI:MGI:3045901|PMID:15177179) RGD PMID:15177179, PMID:17412650 MGI:MGI:3045901, RGD:2302580 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
IBA
IEA
(MGI:MGI:3045901|PMID:15177179)
PMID:21873635
(PMID:10559260), (PMID:10559261)
GO_REF:0000107
RGD
Ensembl
PMID:10559260, PMID:10559261, PMID:15177179, PMID:21873635 GO_REF:0000107, MGI:MGI:3045901, RGD:13792537 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit ISO
IBA
(PMID:10559260)
PMID:21873635
RGD PMID:10559260, PMID:21873635 RGD:13792537 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit ISO (PMID:15177179) RGD PMID:15177179 NCBI chr 1:141,172,117...141,188,893
Ensembl chr 1:141,172,531...141,188,031
JBrowse link
G Poll DNA polymerase lambda ISO
ISS
(PMID:19806195)
GO_REF:0000024
RGD
UniProt
PMID:19806195 GO_REF:0000024 NCBI chr 1:265,290,337...265,298,847
Ensembl chr 1:265,290,339...265,298,797
JBrowse link
DNA dealkylation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase ISO (PMID:18603530) RGD PMID:18603530 NCBI chr 6:111,456,096...111,476,829
Ensembl chr 6:111,456,187...111,477,090
JBrowse link
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase ISO
IBA
(PMID:18432238)
PMID:21873635
RGD PMID:18432238, PMID:21873635 RGD:13792537 NCBI chr12:48,257,575...48,262,244
Ensembl chr12:48,257,609...48,262,243
JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase ISS
ISO
GO_REF:0000024
(PMID:16858410), (PMID:22055184)
UniProt
RGD
PMID:16858410, PMID:22055184 GO_REF:0000024 NCBI chr 3:82,874,242...82,907,467
Ensembl chr 3:82,874,248...82,906,581
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22055184)
Ensembl
UniProt
RGD
PMID:22055184 GO_REF:0000024, GO_REF:0000107 NCBI chr20:55,253,670...55,557,249
Ensembl chr20:55,253,686...55,556,473
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase ISO
ISS
IEA
(MGI:MGI:3817348|PMID:18775698)
(PMID:18775698), (PMID:20376003)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18775698, PMID:20376003 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3817348 NCBI chr19:16,774,549...17,115,098
Ensembl chr19:16,772,744...17,115,113
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IDA
ISO
(MGI:MGI:50172|PMID:1554415) RGD PMID:1554415, PMID:15025514 MGI:MGI:50172, RGD:2316914 NCBI chr 1:209,237,255...209,464,189
Ensembl chr 1:209,237,233...209,464,190
JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase ISO (PMID:21325134) RGD PMID:21325134 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107
G Exd2 exonuclease 3'-5' domain containing 2 ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:104,017,620...104,051,442
Ensembl chr 6:104,017,607...104,051,446
JBrowse link
G Setmar SET domain and mariner transposase fusion gene ISO (PMID:21491884) RGD PMID:21491884 NCBI chr 4:140,092,346...140,104,495
Ensembl chr 4:140,092,352...140,105,316
JBrowse link
G Slc25a16 solute carrier family 25 member 16 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` ISO
ISS
(PMID:22960744)
GO_REF:0000024
RGD
UniProt
PMID:22960744 GO_REF:0000024 NCBI chr 4:95,884,020...95,945,248
Ensembl chr 4:95,884,743...95,945,248
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:36,610,147...36,640,190
Ensembl chr 7:36,610,147...36,640,189
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO (PMID:17349954) RGD PMID:17349954 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:15,148,983...15,167,311 JBrowse link
G Rad52 RAD52 homolog, DNA repair protein ISO (PMID:19506022)
(MGI:MGI:5619739|PMID:22912580)
RGD PMID:19506022, PMID:22912580 MGI:MGI:5619739 NCBI chr 4:152,429,826...152,451,875
Ensembl chr 4:152,430,187...152,451,609
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease IEA
IBA
ISO
GO_REF:0000002
PMID:21873635
(PMID:18716619), (PMID:19202191)
InterPro
RGD
PMID:18716619, PMID:19202191, PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688
JBrowse link
G RGD1565844 similar to RIKEN cDNA 1700045I19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:32,495,573...32,496,646
Ensembl chr  X:32,495,809...32,496,549
JBrowse link
G Rnf138 ring finger protein 138 ISO
IBA
ISS
(PMID:26502057)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:26502057, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:15,146,925...15,167,361 JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit ISO (PMID:19595721) RGD PMID:19595721 NCBI chr 1:198,114,514...198,120,061
Ensembl chr 1:198,112,245...198,120,061
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit ISO (PMID:19595721) RGD PMID:19595721 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 ISO (PMID:9600082) RGD PMID:9600082 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 ISO (PMID:9600082) RGD PMID:9600082 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Lig1 DNA ligase 1 NOT IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Lig3 DNA ligase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lig4 DNA ligase 4 ISO
IBA
MGI:MGI:1857732 (MGI:MGI:1312981|PMID:9823897)
PMID:21873635
(PMID:12517771)
RGD PMID:9823897, PMID:12517771, PMID:21873635 MGI:MGI:1312981, RGD:13792537 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G LOC100911727 DNA ligase 1-like NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:75,224,143...75,264,441
Ensembl chr 1:75,233,703...75,264,293
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr  X:115,351,012...115,351,755
Ensembl chr  X:115,351,114...115,351,755
JBrowse link
G Paxx PAXX, non-homologous end joining factor ISO
IBA
(PMID:25574025)
PMID:21873635
RGD PMID:25574025, PMID:21873635 RGD:13792537 NCBI chr 3:2,678,987...2,681,668
Ensembl chr 3:2,678,956...2,680,622
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO
IBA
(PMID:12517771)
PMID:21873635
RGD PMID:12517771, PMID:21873635 RGD:13792537 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067300.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:38,799,881...38,800,143 JBrowse link
G AC134087.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:150,994,665...150,994,913 JBrowse link
G Dmc1 DNA meiotic recombinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Rad51 RAD51 recombinase ISO
IBA
(PMID:26681308)
PMID:21873635
RGD PMID:26681308, PMID:21873635 RGD:13792537 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:152,429,826...152,451,875
Ensembl chr 4:152,430,187...152,451,609
JBrowse link
G RGD1561465 similar to RIKEN cDNA 2900010J23 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:150,994,650...150,995,029 JBrowse link
G Swi5 SWI5 homologous recombination repair protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,307,981...11,317,049
Ensembl chr 3:11,307,981...11,317,049
JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
IBA
IEA
MGI:MGI:2447628 (MGI:MGI:2445645|PMID:12429860)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12429860, PMID:21873635 GO_REF:0000107, MGI:MGI:2445645, RGD:13792537 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold ISO
IEA
ISS
(PMID:31467087)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31467087 GO_REF:0000024, GO_REF:0000107 NCBI chr10:90,192,608...90,214,486
Ensembl chr10:90,192,627...90,214,486
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit ISO (PMID:11470886) RGD PMID:11470886 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:1730053), (PMID:24191025), (PMID:3335506)
GO_REF:0000024
RGD
UniProt
PMID:1730053, PMID:3335506, PMID:24191025 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,480,841...219,483,244
Ensembl chr 1:219,481,575...219,483,241
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit ISO (PMID:1730053) RGD PMID:1730053 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Polh DNA polymerase eta ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:5297784|PMID:17612497) RGD PMID:17612497 MGI:MGI:5297784 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15670210)
Ensembl
UniProt
RGD
PMID:15670210 GO_REF:0000024, GO_REF:0000107 NCBI chr17:32,933,395...32,953,641
Ensembl chr17:32,933,396...32,953,641
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT ISS
ISO
GO_REF:0000024
(PMID:1730053)
UniProt
RGD
PMID:1730053 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:MGI:3052754 (MGI:MGI:5562498|PMID:23993650) RGD PMID:23993650 MGI:MGI:5562498 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit IEA
ISO
ISS
GO_REF:0000107
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17525340, PMID:17643121, PMID:19261748 GO_REF:0000024, GO_REF:0000107 NCBI chr14:10,424,674...10,439,010
Ensembl chr14:10,424,674...10,439,003
JBrowse link
G Actr5 actin related protein 5 ISO
IBA
(PMID:19014934)
PMID:21873635
RGD PMID:19014934, PMID:21873635 RGD:13792537 NCBI chr 3:155,118,567...155,132,073
Ensembl chr 3:155,119,042...155,131,829
JBrowse link
G Actr8 actin related protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,047,977...6,062,586
Ensembl chr16:6,048,004...6,062,550
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 IMP
ISO
PMID:19282473
(MGI:MGI:3698695|PMID:17121854)
RGD PMID:17121854, PMID:19282473 MGI:MGI:3698695, RGD:8553580 NCBI chr 1:170,387,625...170,411,263
Ensembl chr 1:170,387,609...170,404,056
JBrowse link
G Aplf aprataxin and PNKP like factor ISO
IBA
MGI:MGI:4128102 (MGI:MGI:4887518|PMID:21211721)
PMID:21873635
(PMID:17396150)
RGD PMID:17396150, PMID:21211721, PMID:21873635 MGI:MGI:4887518, RGD:13792537 NCBI chr 4:119,514,822...119,568,764
Ensembl chr 4:119,514,840...119,568,736
JBrowse link
G Aptx aprataxin ISO
IBA
(PMID:17519253)
PMID:21873635
RGD PMID:17519253, PMID:21873635 RGD:13792537 NCBI chr 5:56,987,714...57,009,481
Ensembl chr 5:56,987,909...57,008,859
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 ISS
ISO
GO_REF:0000024
(PMID:19261746), (PMID:19261748), (PMID:19261749)
UniProt
RGD
PMID:19261746, PMID:19261748, PMID:19261749 GO_REF:0000024 NCBI chr16:19,792,720...19,798,886
Ensembl chr16:19,792,838...19,798,894
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 ISO
ISS
(PMID:19261748)
GO_REF:0000024
RGD
UniProt
PMID:19261748 GO_REF:0000024 NCBI chr 6:25,666,654...26,135,888
Ensembl chr 6:25,666,655...26,051,229
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO (MGI:MGI:5545964|PMID:22186889)
(PMID:17525340), (PMID:17643121), (PMID:19261748), (PMID:22186889)
RGD PMID:17525340, PMID:17643121, PMID:19261748, PMID:22186889 MGI:MGI:5545964 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO (PMID:16845393)
MGI:MGI:2156556|MGI:MGI:2176173|MGI:MGI:2177226 (MGI:MGI:1100157|PMID:9398843), (MGI:MGI:3714678|PMID:17476307)
RGD PMID:9398843, PMID:16845393, PMID:17476307 MGI:MGI:1100157, MGI:MGI:3714678 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17525341), (PMID:19261746), (PMID:19261748)
UniProt
RGD
PMID:17525341, PMID:19261746, PMID:19261748, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Cdca5 cell division cycle associated 5 ISO
IBA
(PMID:17349791)
PMID:21873635
RGD PMID:17349791, PMID:21873635 RGD:13792537 NCBI chr 1:221,448,661...221,462,235
Ensembl chr 1:221,448,661...221,462,233
JBrowse link
G Chek2 checkpoint kinase 2 ISO (PMID:18317453) RGD PMID:18317453 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Dclre1c DNA cross-link repair 1C ISO (MGI:MGI:3514096|PMID:12615897) RGD PMID:12615897 MGI:MGI:3514096 NCBI chr17:78,782,512...78,812,140
Ensembl chr17:78,783,437...78,812,111
JBrowse link
G Ddx1 DEAD-box helicase 1 ISO
ISS
(PMID:18710941)
GO_REF:0000024
RGD
UniProt
PMID:18710941 GO_REF:0000024 NCBI chr 6:38,422,892...38,453,762
Ensembl chr 6:38,422,888...38,453,797
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:67,758,093...67,767,623
NCBI chr11:67,768,542...67,772,428
Ensembl chr11:67,757,928...67,767,622
JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,366,820...82,375,510
Ensembl chr10:82,367,084...82,374,171
JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,253,552...14,257,017
Ensembl chr10:14,254,252...14,256,930
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit NOT ISO MGI:MGI:2183944 (MGI:MGI:2153690|PMID:11707424)
MGI:MGI:2158940|MGI:MGI:2183944|MGI:MGI:3617449 (MGI:MGI:3047512|PMID:15199134), (MGI:MGI:3770581|PMID:17912366)
RGD PMID:11707424, PMID:15199134, PMID:17912366 MGI:MGI:2153690, MGI:MGI:3047512, MGI:MGI:3770581 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ISO MGI:MGI:5308063 (MGI:MGI:5493398|PMID:22614755) RGD PMID:22614755 MGI:MGI:5493398 NCBI chr15:42,500,929...42,519,019
Ensembl chr15:42,500,929...42,518,855
JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:104,017,620...104,051,442
Ensembl chr 6:104,017,607...104,051,446
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO
IEA
(PMID:19234442)
GO_REF:0000107
RGD
Ensembl
PMID:19234442 GO_REF:0000107 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:150,833,754...150,915,390
Ensembl chr 5:150,787,043...150,913,757
JBrowse link
G Ggn gametogenetin ISO MGI:MGI:5503309 (MGI:MGI:5502508|PMID:23451117) RGD PMID:23451117 MGI:MGI:5502508 NCBI chr 1:88,112,873...88,116,990
Ensembl chr 1:88,113,445...88,116,548
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Kat5 lysine acetyltransferase 5 IEA
ISO
GO_REF:0000107
(PMID:10966108)
Ensembl
RGD
PMID:10966108 GO_REF:0000107 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G Lig3 DNA ligase 3 ISO (PMID:19589734) RGD PMID:19589734 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lig4 DNA ligase 4 ISO (PMID:19589734), (PMID:9242410)
MGI:MGI:104517|MGI:MGI:1857732|MGI:MGI:3714783|MGI:MGI:894697 (MGI:MGI:2445902|PMID:12531011), (MGI:MGI:3043875|PMID:15175260), (MGI:MGI:3715270|PMID:17554302)
RGD PMID:9242410, PMID:12531011, PMID:15175260, PMID:17554302, PMID:19589734 MGI:MGI:2445902, MGI:MGI:3043875, MGI:MGI:3715270 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G LOC103689943 meiosis arrest female protein 1-like ISO MGI:MGI:3512917 (MGI:MGI:5461283|PMID:23090997) RGD PMID:23090997 MGI:MGI:5461283 NCBI chr10:28,267...72,912
Ensembl chr10:28,243...72,912
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO
ISS
(PMID:15988022)
GO_REF:0000024
RGD
UniProt
PMID:15988022 GO_REF:0000024 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 ISO MGI:MGI:3512917 (MGI:MGI:5461283|PMID:23090997) RGD PMID:23090997 MGI:MGI:5461283 NCBI chr10:908,806...953,481
Ensembl chr10:908,806...953,474
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:MGI:5770021|PMID:26742488) RGD PMID:26742488 MGI:MGI:5770021 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO MGI:MGI:3027036 (MGI:MGI:3707920|PMID:17291760) RGD PMID:17291760 MGI:MGI:3707920 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Msh2 mutS homolog 2 ISO
IEA
MGI:MGI:1858055 (MGI:MGI:3770581|PMID:17912366)
GO_REF:0000107
RGD
Ensembl
PMID:17912366 GO_REF:0000107, MGI:MGI:3770581 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mta1 metastasis associated 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:4366101|PMID:19805145)
(PMID:19805145)
Ensembl
UniProt
RGD
PMID:19805145, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4366101, RGD:13792537 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Nbn nibrin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9590181)
Ensembl
UniProt
RGD
PMID:9590181 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Nipbl NIPBL, cohesin loading factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO
IBA
ISS
MGI:MGI:1891258 (MGI:MGI:4947917|PMID:21270334)
PMID:21873635
GO_REF:0000024
(PMID:23230272)
RGD
UniProt
PMID:21270334, PMID:23230272, PMID:21873635 GO_REF:0000024, MGI:MGI:4947917, RGD:13792537 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,739,416...27,749,650
Ensembl chr15:27,739,251...27,749,648
JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 ISO
IBA
MGI:MGI:1340806 (MGI:MGI:4947917|PMID:21270334)
PMID:21873635
(PMID:21211721), (PMID:21270334)
RGD PMID:21211721, PMID:21270334, PMID:21873635 MGI:MGI:4947917, RGD:13792537 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799
JBrowse link
G Polq DNA polymerase theta ISO (PMID:22135286) RGD PMID:22135286 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO
IBA
(PMID:18710952)
PMID:21873635
MGI:MGI:1857113|MGI:MGI:2667593 (MGI:MGI:2155497|PMID:11751629), (MGI:MGI:2450507|PMID:12604618)
RGD PMID:11751629, PMID:12604618, PMID:18710952, PMID:21873635 MGI:MGI:2155497, MGI:MGI:2450507, RGD:13792537 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO MGI:MGI:5292341 (MGI:MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:MGI:5288570 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad50 RAD50 double strand break repair protein TAS
ISS
ISO
GO_REF:0000024
(PMID:9590181)
UniProt
RGD
PMID:9590181, PMID:10908350 GO_REF:0000024, RGD:68816 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad54l RAD54 like ISO MGI:MGI:1335098 (MGI:MGI:3043875|PMID:15175260) RGD PMID:15175260 MGI:MGI:3043875 NCBI chr 5:134,948,511...134,978,125
Ensembl chr 5:134,948,512...134,978,125
JBrowse link
G Rnf168 ring finger protein 168 ISS
ISO
IEA
GO_REF:0000024
(PMID:19203578), (PMID:19203579), (PMID:22980979)
GO_REF:0000104
UniProt
RGD
PMID:19203578, PMID:19203579, PMID:22980979 GO_REF:0000024, GO_REF:0000104 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rnf8 ring finger protein 8 ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:18001824), (PMID:18001825), (PMID:22980979)
GO_REF:0000104
UniProt
RGD
PMID:18001824, PMID:18001825, PMID:22980979, PMID:21873635 GO_REF:0000024, GO_REF:0000104, RGD:13792537 NCBI chr20:8,285,380...8,309,858
Ensembl chr20:8,285,296...8,309,908
JBrowse link
G Setx senataxin ISO (PMID:17562789) RGD PMID:17562789 NCBI chr 3:7,680,430...7,731,815
Ensembl chr 3:7,686,503...7,730,539
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:12023295)
Ensembl
RGD
PMID:12023295, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 6:123,895,860...123,963,688
Ensembl chr 6:123,897,956...123,963,675
JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:19794497), (PMID:21030584)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19794497, PMID:21030584, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr17:42,229,667...42,241,025
Ensembl chr17:42,229,642...42,241,066
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 ISO (PMID:25749521) RGD PMID:25749521 NCBI chr 3:72,458,520...72,483,206
Ensembl chr 3:72,460,889...72,483,217
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:1857989 (MGI:MGI:3770581|PMID:17912366) RGD PMID:17912366 MGI:MGI:3770581 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISS
ISO
GO_REF:0000024
MGI:MGI:3719273 (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:4821667|PMID:20711356)
UniProt
RGD
PMID:17696610, PMID:20711356 GO_REF:0000024, MGI:MGI:3719060, MGI:MGI:4821667 NCBI chr 1:31,967,980...32,012,923
Ensembl chr 1:31,967,978...32,012,919
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
UniProt
Ensembl
RGD
PMID:17525340, PMID:17525341, PMID:17525342, PMID:17643121, PMID:19261748, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr17:10,061,915...10,130,921
Ensembl chr17:10,065,947...10,130,907
JBrowse link
G Vcp valosin-containing protein ISS
ISO
GO_REF:0000024
(PMID:10855792), (PMID:22120668)
UniProt
RGD
PMID:10855792, PMID:22120668 GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO (PMID:9242410)
MGI:MGI:1926771 (MGI:MGI:1913213|PMID:9875844), (MGI:MGI:2155497|PMID:11751629)
RGD PMID:9242410, PMID:9875844, PMID:11751629 MGI:MGI:1913213, MGI:MGI:2155497 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 NAS
ISO
(PMID:19581589)
MGI:MGI:1335098|MGI:MGI:2179987 (MGI:MGI:2445902|PMID:12531011)
RGD PMID:12531011, PMID:19581589, PMID:11966321 MGI:MGI:2445902, RGD:727219 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 TAS
ISO
MGI:MGI:2179954 (MGI:MGI:2155497|PMID:11751629) RGD PMID:11751629, PMID:11966321 MGI:MGI:2155497, RGD:727219 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO
IBA
MGI:MGI:4129733 (MGI:MGI:5700253|PMID:26490168)
PMID:21873635
RGD PMID:26490168, PMID:21873635 MGI:MGI:5700253, RGD:13792537 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Fancd2 FA complementation group D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:145,489,869...145,551,479
Ensembl chr 4:145,489,869...145,551,479
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 ISO
IEA
MGI:MGI:1349669|MGI:MGI:2178050|MGI:MGI:5511194 (MGI:MGI:5805564|PMID:27760146)
GO_REF:0000107
RGD
Ensembl
PMID:27760146 GO_REF:0000107, MGI:MGI:5805564 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Morc2b microrchidia 2B IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:15,479,754...15,483,834
Ensembl chr 7:15,479,762...15,483,834
JBrowse link
G Prdm9 PR/SET domain 9 ISS
ISO
GO_REF:0000024
(MGI:MGI:6102131|PMID:25894966), (MGI:MGI:6114980|PMID:29478809)
UniProt
RGD
PMID:25894966, PMID:29478809 GO_REF:0000024, MGI:MGI:6102131, MGI:MGI:6114980 NCBI chr 1:57,533,602...57,555,155
Ensembl chr 1:57,533,577...57,555,048
JBrowse link
G Spo11 SPO11, initiator of meiotic double stranded breaks ISO MGI:MGI:3045334 (MGI:MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:MGI:5805564 NCBI chr 3:170,991,573...171,008,226
Ensembl chr 3:170,994,038...171,013,185
JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmces 5-hydroxymethylcytosine binding, ES cell specific ISO (MGI:MGI:6393148|PMID:31806351) RGD PMID:31806351 MGI:MGI:6393148 NCBI chr 4:119,841,088...119,864,115
Ensembl chr 4:119,815,139...119,864,114
JBrowse link
G Lig3 DNA ligase 3 ISO
IBA
UniProtKB:P13010 (PMID:24837021)
PMID:21873635
(MGI:MGI:5014103|PMID:21655080)
RGD PMID:21655080, PMID:24837021, PMID:21873635 MGI:MGI:5014103, RGD:13792537 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Polq DNA polymerase theta ISO (PMID:25643323)
(MGI:MGI:5621198|PMID:25642960)
RGD PMID:25642960, PMID:25643323 MGI:MGI:5621198 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc45 cell division cycle 45 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,328,785...86,354,099
Ensembl chr11:86,329,012...86,358,453
JBrowse link
G Cdc7 cell division cycle 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:3,826,658...3,846,891
Ensembl chr14:3,826,659...3,846,891
JBrowse link
G Gins2 GINS complex subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:54,151,048...54,163,701
Ensembl chr19:54,151,048...54,163,608
JBrowse link
G Gins4 GINS complex subunit 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:73,584,412...73,596,808
Ensembl chr16:73,584,521...73,596,793
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:26,914,057...26,932,201
Ensembl chr 9:26,914,057...26,932,201
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:89,511,191...89,524,892
Ensembl chr11:89,511,191...89,524,892
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:14,523,482...14,561,281
Ensembl chr19:14,523,554...14,561,278
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,042,882...45,068,073
Ensembl chr13:45,042,882...45,068,077
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,306,615...19,313,877
Ensembl chr12:19,306,607...19,314,016
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,862,474...220,867,973
Ensembl chr 1:220,862,386...220,867,815
JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:29545921) RGD PMID:29545921 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO (PMID:29545921) RGD PMID:29545921 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Lig4 DNA ligase 4 ISO (PMID:24837021) RGD PMID:24837021 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Uvrag UV radiation resistance associated ISO (PMID:22542840) RGD PMID:22542840 NCBI chr 1:163,844,804...164,101,568
Ensembl chr 1:163,844,818...164,101,578
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO (PMID:24095731) RGD PMID:24095731 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:5702356|PMID:26446488)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26446488 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5702356 NCBI chr 7:11,429,266...11,446,119
Ensembl chr 7:11,432,049...11,444,786
JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:15,148,983...15,167,311 JBrowse link
G AC095390.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:51,965,417...51,965,779 JBrowse link
G AC117889.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:975,697...1,003,352 JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 ISO (PMID:20613862) RGD PMID:20613862 NCBI chr 3:123,754,035...123,757,349
Ensembl chr 3:123,754,057...123,757,359
JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 ISO (PMID:20613862) RGD PMID:20613862 NCBI chr12:14,161,998...14,175,997 JBrowse link
G Atm ATM serine/threonine kinase ISO MGI:MGI:1857132 (MGI:MGI:3836659|PMID:19061978) RGD PMID:19061978 MGI:MGI:3836659 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Aunip aurora kinase A and ninein interacting protein ISO
ISS
(PMID:29042561)
GO_REF:0000024
RGD
UniProt
PMID:29042561 GO_REF:0000024 NCBI chr 5:152,721,799...152,734,577
Ensembl chr 5:152,721,940...152,734,572
JBrowse link
G Blm BLM RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO
IBA
IEA
(PMID:17349954)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:17349954, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO
IBA
ISS
IEA
MGI:MGI:2653913|MGI:MGI:2653914 (MGI:MGI:3511388|PMID:15485900)
PMID:21873635
(PMID:20729832), (PMID:21719596)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15485900, PMID:20729832, PMID:21719596, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3511388, RGD:13792537 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO
IBA
(PMID:14728600)
PMID:21873635
RGD PMID:14728600, PMID:21873635 RGD:13792537 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:104,017,620...104,051,442
Ensembl chr 6:104,017,607...104,051,446
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015, PMID:20603016 NCBI chr 1:125,182,117...125,209,772
Ensembl chr 1:125,181,838...125,209,727
JBrowse link
G Fbh1 F-box DNA helicase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease ISO (PMID:23166748) RGD PMID:23166748 NCBI chr 6:36,910,064...36,940,868
Ensembl chr 6:36,910,675...36,940,868
JBrowse link
G H2ax H2A.X variant histone ISO MGI:MGI:2156048 (MGI:MGI:2179182|PMID:11934988) RGD PMID:11934988 MGI:MGI:2179182 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Helq helicase, POLQ-like ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:10,446,981...10,491,042
Ensembl chr14:10,446,993...10,491,190
JBrowse link
G Hus1 HUS1 checkpoint clamp component ISO
IBA
(MGI:MGI:3690191|PMID:16278671)
PMID:21873635
RGD PMID:16278671, PMID:21873635 MGI:MGI:3690191, RGD:13792537 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Kash5 KASH domain containing 5 ISO (MGI:MGI:5515826|PMID:24062341) RGD PMID:24062341 MGI:MGI:5515826 NCBI chr 1:101,180,497...101,203,048
Ensembl chr 1:101,180,657...101,198,801
JBrowse link
G Kdm4d lysine demethylase 4D ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G LOC100362927 replication protein A3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,965,390...51,965,816 JBrowse link
G LOC103690165 checkpoint protein HUS1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:34,691,084...34,694,690
Ensembl chr17:34,693,597...34,694,690
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor ISO
IBA
ISS
(MGI:MGI:5437561|PMID:22771120)
PMID:21873635
(PMID:23401855)
GO_REF:0000024
RGD
UniProt
PMID:22771120, PMID:23401855, PMID:21873635 GO_REF:0000024, MGI:MGI:5437561, RGD:13792537 NCBI chr 3:125,470,499...125,500,795
Ensembl chr 3:125,470,551...125,500,795
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor ISO
IBA
(PMID:22771115), (PMID:23401855)
PMID:21873635
(MGI:MGI:5437561|PMID:22771120), (MGI:MGI:5525985|PMID:23401855)
RGD PMID:22771115, PMID:22771120, PMID:23401855, PMID:21873635 MGI:MGI:5437561, MGI:MGI:5525985, RGD:13792537 NCBI chr20:34,818,093...34,930,157
Ensembl chr20:34,846,804...34,929,965
JBrowse link
G Mcmdc1 minichromosome maintenance deficient domain containing 1 ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537
G Meiob meiosis specific with OB-fold ISS
ISO
GO_REF:0000024
(MGI:MGI:5527015|PMID:24068956), (MGI:MGI:5538413|PMID:24240703)
UniProt
RGD
PMID:24068956, PMID:24240703 GO_REF:0000024, MGI:MGI:5527015, MGI:MGI:5538413 NCBI chr10:14,174,645...14,206,026
Ensembl chr10:14,174,732...14,206,025
JBrowse link
G Mms22l MMS22-like, DNA repair protein ISO
IBA
(PMID:21055983), (PMID:21055984), (PMID:21055985)
PMID:21873635
RGD PMID:21055983, PMID:21055984, PMID:21055985, PMID:21873635 RGD:13792537 NCBI chr 5:38,844,502...38,960,989
Ensembl chr 5:38,844,488...38,961,035
JBrowse link
G Morf4l1 mortality factor 4 like 1 ISO
ISS
(PMID:20332121)
GO_REF:0000024
RGD
UniProt
PMID:20332121 GO_REF:0000024 NCBI chr 8:97,473,454...97,494,974
Ensembl chr 8:97,474,092...97,494,834
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:29670289), (PMID:30612738)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29670289, PMID:30612738, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nabp1 nucleic acid binding protein 1 ISO
IBA
ISS
(PMID:19605351)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19605351, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:55,049,893...55,057,784
Ensembl chr 9:55,050,203...55,057,658
JBrowse link
G Nabp2 nucleic acid binding protein 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:19605351)
Ensembl
UniProt
RGD
PMID:19605351, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
G Nbn nibrin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:196,857,490...196,883,907
Ensembl chr 1:196,857,461...196,884,302
JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase IEA
IBA
ISS
ISO
GO_REF:0000002
PMID:21873635
GO_REF:0000024
(PMID:16810316)
InterPro
UniProt
RGD
PMID:16810316, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr 7:99,677,295...99,900,765
Ensembl chr 7:99,677,290...99,900,764
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO
IBA
(PMID:26323318)
PMID:21873635
RGD PMID:26323318, PMID:21873635 RGD:13792537 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Palb2 partner and localizer of BRCA2 ISO
IBA
(PMID:19369211), (PMID:19423707), (PMID:26323318)
PMID:21873635
RGD PMID:19369211, PMID:19423707, PMID:26323318, PMID:21873635 RGD:13792537 NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520
JBrowse link
G Poll DNA polymerase lambda ISO
ISS
(PMID:20693240)
GO_REF:0000024
RGD
UniProt
PMID:20693240 GO_REF:0000024 NCBI chr 1:265,290,337...265,298,847
Ensembl chr 1:265,290,339...265,298,797
JBrowse link
G Poln DNA polymerase nu ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:81,837,764...82,037,999
Ensembl chr14:81,858,737...82,037,747
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:47,578,449...47,673,330
Ensembl chr 3:47,578,384...47,673,338
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO MGI:MGI:3512754 (MGI:MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:MGI:5428050 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad51 RAD51 recombinase IEP
ISO
(MGI:MGI:3511388|PMID:15485900), (MGI:MGI:3525800|PMID:15359272)
(PMID:16428451), (PMID:22778135), (PMID:23509288), (PMID:26681308)
RGD PMID:15359272, PMID:15485900, PMID:16428451, PMID:22778135, PMID:23509288, PMID:26681308, PMID:14755242 MGI:MGI:3511388, MGI:MGI:3525800, RGD:9831188 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rad51ap1 RAD51 associated protein 1 ISO
IBA
(PMID:26323318)
PMID:21873635
RGD PMID:26323318, PMID:21873635 RGD:13792537 NCBI chr 4:159,469,803...159,482,869
Ensembl chr 4:159,469,804...159,482,869
JBrowse link
G Rad51b RAD51 paralog B ISO
IBA
(PMID:23149936)
PMID:21873635
RGD PMID:23149936, PMID:21873635 RGD:13792537 NCBI chr 6:102,473,978...103,018,185
Ensembl chr 6:102,477,036...102,512,505
JBrowse link
G Rad51c RAD51 paralog C ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:74,697,713...74,724,004
Ensembl chr10:74,697,716...74,724,472
JBrowse link
G Rad51d RAD51 paralog D ISO
IBA
(PMID:23149936)
PMID:21873635
RGD PMID:23149936, PMID:21873635 RGD:13792537 NCBI chr10:70,222,703...70,241,352
Ensembl chr10:70,227,163...70,241,254
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein ISO
IBA
(MGI:MGI:2446961|PMID:12379650)
PMID:21873635
RGD PMID:12379650, PMID:21873635 MGI:MGI:2446961, RGD:13792537 NCBI chr 4:152,429,826...152,451,875
Ensembl chr 4:152,430,187...152,451,609
JBrowse link
G Rad54b RAD54 homolog B ISO
IBA
(PMID:16428451)
PMID:21873635
MGI:MGI:3617695|MGI:MGI:894697 (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3836659|PMID:19061978)
RGD PMID:16428451, PMID:19061978, PMID:21873635 MGI:MGI:3615835, MGI:MGI:3836659, RGD:13792537 NCBI chr 5:25,140,531...25,214,469
Ensembl chr 5:25,146,949...25,214,376
JBrowse link
G Rad54l RAD54 like ISO MGI:MGI:2183934|MGI:MGI:3605986 (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3836659|PMID:19061978) RGD PMID:16428451, PMID:19061978 MGI:MGI:3615835, MGI:MGI:3836659 NCBI chr 5:134,948,511...134,978,125
Ensembl chr 5:134,948,512...134,978,125
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO MGI:MGI:5292341 (MGI:MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:MGI:5428050 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Recql RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:176,581,892...176,606,520
Ensembl chr 4:176,581,897...176,606,382
JBrowse link
G Recql4 RecQ like helicase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Recql5 RecQ like helicase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,803,664...44,961,362
Ensembl chr20:44,803,666...44,961,382
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 ISO (PMID:26474068), (PMID:28575657), (PMID:28575658), (PMID:28691929) RGD PMID:26474068, PMID:28575657, PMID:28575658, PMID:28691929 NCBI chr19:42,960,597...42,971,894
Ensembl chr19:42,964,586...42,972,101
JBrowse link
G RGD1565844 similar to RIKEN cDNA 1700045I19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:32,495,573...32,496,646
Ensembl chr  X:32,495,809...32,496,549
JBrowse link
G Rmi1 RecQ mediated genome instability 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:6,658,285...6,665,618
Ensembl chr17:6,658,388...6,660,536
JBrowse link
G Rnf138 ring finger protein 138 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:26502055), (PMID:26502057)
UniProt
RGD
PMID:26502055, PMID:26502057, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:15,146,925...15,167,361 JBrowse link
G Rpa1 replication protein A1 ISO
IBA
MGI:MGI:3582609 (MGI:MGI:3056835|PMID:15470499)
PMID:21873635
(PMID:17765923)
RGD PMID:15470499, PMID:17765923, PMID:21873635 MGI:MGI:3056835, RGD:13792537 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rpa2 replication protein A2 ISO
IBA
ISS
(PMID:17765923)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17765923, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:150,957,041...150,967,597
Ensembl chr 5:150,957,001...150,968,269
JBrowse link
G Rpa3 replication protein A3 ISO
IBA
(PMID:17765923)
PMID:21873635
RGD PMID:17765923, PMID:21873635 RGD:13792537 NCBI chr 4:34,279,320...34,282,351
Ensembl chr 4:34,279,320...34,282,351
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754, PMID:29670289 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
G Sem1 SEM1, 26S proteasome complex subunit ISO
IBA
(MGI:MGI:3525800|PMID:15359272)
PMID:21873635
RGD PMID:15359272, PMID:21873635 MGI:MGI:3525800, RGD:13792537 NCBI chr 4:32,067,444...32,087,600
Ensembl chr 4:32,067,444...32,087,600
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (PMID:20813759) RGD PMID:20813759 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:4868525|PMID:20976249)
(PMID:21252223)
Ensembl
UniProt
RGD
PMID:20976249, PMID:21252223, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4868525, RGD:13792537 NCBI chr 1:267,505,336...267,509,350
Ensembl chr 1:267,483,145...267,509,350
JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit ISO
IBA
(PMID:19595721)
PMID:21873635
RGD PMID:19595721, PMID:21873635 RGD:13792537 NCBI chr 1:198,114,514...198,120,061
Ensembl chr 1:198,112,245...198,120,061
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit ISO (PMID:19595721), (PMID:19596235) RGD PMID:19595721, PMID:19596235 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
G Smc5 structural maintenance of chromosomes 5 ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 1:240,977,898...241,046,273
Ensembl chr 1:240,977,898...241,046,256
JBrowse link
G Spidr scaffold protein involved in DNA repair ISO
IBA
(PMID:23509288)
PMID:21873635
RGD PMID:23509288, PMID:21873635 RGD:13792537 NCBI chr11:89,009,931...89,260,361
Ensembl chr11:89,009,931...89,260,297
JBrowse link
G Swi5 SWI5 homologous recombination repair protein ISO
ISS
(PMID:21252223)
GO_REF:0000024
(MGI:MGI:4868525|PMID:20976249)
RGD
UniProt
PMID:20976249, PMID:21252223 GO_REF:0000024, MGI:MGI:4868525 NCBI chr 3:11,307,981...11,317,049
Ensembl chr 3:11,307,981...11,317,049
JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 ISO
IBA
(PMID:21965664)
PMID:21873635
RGD PMID:21965664, PMID:21873635 RGD:13792537 NCBI chr 8:22,966,752...22,969,280
Ensembl chr 8:22,966,561...22,969,459
JBrowse link
G Tonsl tonsoku-like, DNA repair protein ISS
ISO
GO_REF:0000024
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:30773278)
UniProt
RGD
PMID:21055983, PMID:21055984, PMID:21055985, PMID:30773278 GO_REF:0000024 NCBI chr 7:117,688,397...117,703,139
Ensembl chr 7:117,688,397...117,703,094
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:36,610,147...36,640,190
Ensembl chr 7:36,610,147...36,640,189
JBrowse link
G Wdr48 WD repeat domain 48 ISO MGI:MGI:3877670 (MGI:MGI:5547894|PMID:24001775) RGD PMID:24001775 MGI:MGI:5547894 NCBI chr 8:128,577,080...128,610,287
Ensembl chr 8:128,577,080...128,610,287
JBrowse link
G Wrn WRN RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 ISO
IBA
MGI:MGI:3654106 (MGI:MGI:3652689|PMID:16777961)
PMID:21873635
(PMID:23149936)
RGD PMID:16777961, PMID:23149936, PMID:21873635 MGI:MGI:3652689, RGD:13792537 NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO (PMID:23149936) RGD PMID:23149936 NCBI chr 6:136,366,917...136,380,751
Ensembl chr 6:136,371,555...136,379,348
JBrowse link
G Yy1 YY1 transcription factor ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 IEA
ISO
GO_REF:0000107
(PMID:20613862)
Ensembl
RGD
PMID:20613862 GO_REF:0000107 NCBI chr 6:102,409,235...102,472,962
Ensembl chr 6:102,409,881...102,472,926
JBrowse link
G Zswim7 zinc finger, SWIM-type containing 7 ISO
IBA
(PMID:21965664)
PMID:21873635
RGD PMID:21965664, PMID:21873635 RGD:13792537 NCBI chr10:48,587,117...48,599,208
Ensembl chr10:48,587,119...48,599,208
JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ ISO
IBA
ISS
(PMID:24610814)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24610814, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:62,391,770...62,397,162
Ensembl chr 4:62,391,770...62,396,035
JBrowse link
G Dclre1a DNA cross-link repair 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,335,792...277,355,701
Ensembl chr 1:277,335,790...277,355,075
JBrowse link
G Dclre1b DNA cross-link repair 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:206,285,085...206,293,599
Ensembl chr 2:206,285,089...206,293,599
JBrowse link
G Dclre1c DNA cross-link repair 1C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:78,782,512...78,812,140
Ensembl chr17:78,783,437...78,812,111
JBrowse link
G Dntt DNA nucleotidylexotransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:260,289,626...260,321,174
Ensembl chr 1:260,289,589...260,321,320
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Kdm2a lysine demethylase 2A ISO (PMID:21187428) RGD PMID:21187428 NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
JBrowse link
G Lig1 DNA ligase 1 ISO (MGI:MGI:5014103|PMID:21655080) RGD PMID:21655080 MGI:MGI:5014103 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Lig3 DNA ligase 3 ISO (MGI:MGI:5014103|PMID:21655080) RGD PMID:21655080 MGI:MGI:5014103 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lig4 DNA ligase 4 ISO
IBA
UniProtKB:Q15554 (PMID:12517771), (PMID:23275564), (PMID:9809069)
PMID:21873635
MGI:MGI:1857720|MGI:MGI:1857732 (MGI:MGI:1859491|PMID:10823907), (MGI:MGI:3652689|PMID:16777961), (MGI:MGI:5705227|PMID:12361565)
RGD PMID:9809069, PMID:10823907, PMID:12361565, PMID:12517771, PMID:16777961, PMID:23275564, PMID:21873635 MGI:MGI:1859491, MGI:MGI:3652689, MGI:MGI:5705227, RGD:13792537 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Mlh1 mutL homolog 1 ISO
IEA
MGI:MGI:1857946 (MGI:MGI:3039915|PMID:15084308)
GO_REF:0000107
RGD
Ensembl
PMID:15084308 GO_REF:0000107, MGI:MGI:3039915 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO
IBA
IEA
(PMID:9651580)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:9651580, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nhej1 nonhomologous end-joining factor 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:16439204), (PMID:16439205)
UniProt
RGD
PMID:16439204, PMID:16439205, PMID:21873635, PMID:16439205 GO_REF:0000024, RGD:13792537, RGD:8553261 NCBI chr 9:82,230,230...82,327,923
Ensembl chr 9:82,230,232...82,327,534
JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase NOT ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 7:99,677,295...99,900,765
Ensembl chr 7:99,677,290...99,900,764
JBrowse link
G Paxx PAXX, non-homologous end joining factor ISO
IBA
(PMID:25574025), (PMID:25670504), (PMID:25941166)
PMID:21873635
RGD PMID:25574025, PMID:25670504, PMID:25941166, PMID:21873635 RGD:13792537 NCBI chr 3:2,678,987...2,681,668
Ensembl chr 3:2,678,956...2,680,622
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit ISO
ISS
(PMID:11470886)
GO_REF:0000024
RGD
UniProt
PMID:11470886 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Polb DNA polymerase beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Poll DNA polymerase lambda ISO
IBA
ISS
(PMID:19806195)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19806195, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:265,290,337...265,298,847
Ensembl chr 1:265,290,339...265,298,797
JBrowse link
G Polm DNA polymerase mu IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,069,378...86,079,327
Ensembl chr14:86,069,016...86,078,954
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:MGI:5543316|PMID:23836881) RGD PMID:23836881 MGI:MGI:5543316 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO
ISS
(PMID:18263876)
GO_REF:0000024
RGD
UniProt
PMID:18263876 GO_REF:0000024 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:47,578,449...47,673,330
Ensembl chr 3:47,578,384...47,673,338
JBrowse link
G Rnf8 ring finger protein 8 ISS
ISO
GO_REF:0000024
(MGI:MGI:5293246|PMID:21857671), (MGI:MGI:5465398|PMID:22266820)
UniProt
RGD
PMID:21857671, PMID:22266820 GO_REF:0000024, MGI:MGI:5293246, MGI:MGI:5465398 NCBI chr20:8,285,380...8,309,858
Ensembl chr20:8,285,296...8,309,908
JBrowse link
G Setmar SET domain and mariner transposase fusion gene ISO (PMID:16332963), (PMID:18263876), (PMID:21187428), (PMID:24573677) RGD PMID:16332963, PMID:18263876, PMID:21187428, PMID:24573677 NCBI chr 4:140,092,346...140,104,495
Ensembl chr 4:140,092,352...140,105,316
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 ISO (PMID:26089390) RGD PMID:26089390 NCBI chr 9:79,943,775...79,990,230
Ensembl chr 9:79,944,132...79,990,229
JBrowse link
G Smc5 structural maintenance of chromosomes 5 NOT ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 1:240,977,898...241,046,273
Ensembl chr 1:240,977,898...241,046,256
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO (PMID:23333306), (PMID:23760478), (PMID:28241136)
(MGI:MGI:5476381|PMID:23333305), (MGI:MGI:5887194|PMID:20362325)
RGD PMID:20362325, PMID:23333305, PMID:23333306, PMID:23760478, PMID:28241136 MGI:MGI:5476381, MGI:MGI:5887194 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO (MGI:MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:MGI:3758502 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO
IBA
UniProtKB:P49917 (PMID:12517771), (PMID:9809069)
PMID:21873635
MGI:MGI:1926771|MGI:MGI:3047571|MGI:MGI:3641440 (MGI:MGI:3758502|PMID:14690602), (MGI:MGI:3761960|PMID:17713479)
RGD PMID:9809069, PMID:12517771, PMID:14690602, PMID:17713479, PMID:21873635 MGI:MGI:3758502, MGI:MGI:3761960, RGD:13792537 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO
IBA
(PMID:20383123), (PMID:26359349)
PMID:21873635
RGD PMID:20383123, PMID:26359349, PMID:21873635 RGD:13792537 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO
IBA
MGI:MGI:2179954 (MGI:MGI:2155497|PMID:11751629)
PMID:21873635
(PMID:20383123), (PMID:26359349)
RGD PMID:11751629, PMID:20383123, PMID:26359349, PMID:21873635 MGI:MGI:2155497, RGD:13792537 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad52 RAD52 homolog, DNA repair protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,429,826...152,451,875
Ensembl chr 4:152,430,187...152,451,609
JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fancm FA complementation group M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,823,195...86,877,067
Ensembl chr 6:86,823,684...86,876,633
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:136,366,917...136,380,751
Ensembl chr 6:136,371,555...136,379,348
JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube2v1 ubiquitin conjugating enzyme E2 V1 ISO SGD:S000003055 (MGI:MGI:2136126|PMID:11406273) RGD PMID:11406273 MGI:MGI:2136126 NCBI chr 3:164,343,833...164,366,684
Ensembl chr 3:164,343,833...164,366,684
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO SGD:S000003055 (MGI:MGI:2136126|PMID:11406273) RGD PMID:11406273 MGI:MGI:2136126 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:24191025)
GO_REF:0000024
RGD
UniProt
PMID:24191025 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO
IBA
(PMID:24191025)
PMID:21873635
RGD PMID:24191025, PMID:21873635 RGD:13792537 NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272
JBrowse link
G Rev1 REV1, DNA directed polymerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pole2 DNA polymerase epsilon 2, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:91,494,348...91,532,355
Ensembl chr 6:91,494,393...91,518,996
JBrowse link
G Polh DNA polymerase eta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Polk DNA polymerase kappa ISO
IBA
(PMID:28297716)
PMID:21873635
RGD PMID:28297716, PMID:21873635 RGD:13792537 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Primpol primase and DNA directed polymerase ISO (PMID:24682820), (PMID:25746449), (PMID:28534480) RGD PMID:24682820, PMID:25746449, PMID:28534480 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Rev1 REV1, DNA directed polymerase ISO
IBA
(MGI:MGI:2157239|PMID:11711549)
PMID:21873635
RGD PMID:11711549, PMID:21873635 MGI:MGI:2157239, RGD:13792537 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,803,664...44,961,362
Ensembl chr20:44,803,666...44,961,382
JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dclre1a DNA cross-link repair 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,335,792...277,355,701
Ensembl chr 1:277,335,790...277,355,075
JBrowse link
G Dclre1b DNA cross-link repair 1B ISO
IEA
IBA
(PMID:20479256)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:20479256, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:206,285,085...206,293,599
Ensembl chr 2:206,285,089...206,293,599
JBrowse link
G Dclre1c DNA cross-link repair 1C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:78,782,512...78,812,140
Ensembl chr17:78,783,437...78,812,111
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (MGI:MGI:5506835|PMID:23637614) RGD PMID:23637614 MGI:MGI:5506835 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 ISO (PMID:24507776) RGD PMID:24507776 NCBI chr17:1,325,654...1,421,732
Ensembl chr17:1,305,016...1,421,685
JBrowse link
G Exo5 exonuclease 5 ISO
IBA
(PMID:23095756)
PMID:21873635
RGD PMID:23095756, PMID:21873635 RGD:13792537 NCBI chr 5:139,849,930...139,853,247
Ensembl chr 5:139,849,930...139,853,247
JBrowse link
G Faap100 FA core complex associated protein 100 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:109,539,381...109,552,434
Ensembl chr10:109,539,548...109,551,362
JBrowse link
G Faap20 FA core complex associated protein 20 ISS
ISO
GO_REF:0000024
(PMID:22266823), (PMID:22396592), (PMID:22705371)
UniProt
RGD
PMID:22266823, PMID:22396592, PMID:22705371 GO_REF:0000024 NCBI chr 5:172,648,171...172,655,576
Ensembl chr 5:172,648,950...172,655,576
JBrowse link
G Faap24 FA core complex associated protein 24 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:91,657,263...91,663,485
Ensembl chr 1:91,657,263...91,663,467
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 ISO
IBA
(PMID:25430771)
PMID:21873635
RGD PMID:25430771, PMID:21873635 RGD:13792537 NCBI chr 1:125,182,117...125,209,772
Ensembl chr 1:125,181,838...125,209,727
JBrowse link
G Fanca FA complementation group A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:56,067,548...56,126,075
Ensembl chr19:56,067,548...56,126,063
JBrowse link
G Fancb FA complementation group B IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:31,124,018...31,140,790
Ensembl chr  X:31,124,018...31,140,711
JBrowse link
G Fancc FA complementation group C IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:826,512...955,703
Ensembl chr17:833,509...955,615
JBrowse link
G Fancd2 FA complementation group D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:145,489,869...145,551,479
Ensembl chr 4:145,489,869...145,551,479
JBrowse link
G Fance FA complementation group E IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:7,888,927...7,906,142
Ensembl chr20:7,895,083...7,906,142
JBrowse link
G Fancf FA complementation group F IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:107,229,516...107,232,321
Ensembl chr 1:107,231,292...107,232,305
JBrowse link
G Fancg FA complementation group G IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:58,448,060...58,456,416
Ensembl chr 5:58,448,822...58,455,819
JBrowse link
G Fancl FA complementation group L IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:110,675,306...110,740,880
Ensembl chr14:110,676,090...110,740,317
JBrowse link
G Fancm FA complementation group M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,823,195...86,877,067
Ensembl chr 6:86,823,684...86,876,633
JBrowse link
G Hrob homologous recombination factor with OB-fold ISO
IEA
ISS
(PMID:31467087)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31467087 GO_REF:0000024, GO_REF:0000107 NCBI chr10:90,192,608...90,214,486
Ensembl chr10:90,192,627...90,214,486
JBrowse link
G Msh6 mutS homolog 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO
IBA
(PMID:26323318)
PMID:21873635
RGD PMID:26323318, PMID:21873635 RGD:13792537 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Poln DNA polymerase nu ISO (PMID:19908865), (PMID:19995904) RGD PMID:19908865, PMID:19995904 NCBI chr14:81,837,764...82,037,999
Ensembl chr14:81,858,737...82,037,747
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:26253028) RGD PMID:26253028 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rad51ap1 RAD51 associated protein 1 ISO
IBA
(PMID:26323318)
PMID:21873635
RGD PMID:26323318, PMID:21873635 RGD:13792537 NCBI chr 4:159,469,803...159,482,869
Ensembl chr 4:159,469,804...159,482,869
JBrowse link
G Rad51d RAD51 paralog D ISO MGI:MGI:2386281 (MGI:MGI:3574680|PMID:15781618) RGD PMID:15781618 MGI:MGI:3574680 NCBI chr10:70,222,703...70,241,352
Ensembl chr10:70,227,163...70,241,254
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 ISO (PMID:28575657), (PMID:28575658) RGD PMID:28575657, PMID:28575658 NCBI chr19:42,960,597...42,971,894
Ensembl chr19:42,964,586...42,972,101
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
G Vcp valosin-containing protein ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 6:136,366,917...136,380,751
Ensembl chr 6:136,371,555...136,379,348
JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 ISO
IEA
MGI:MGI:2178050|MGI:MGI:5511194 (MGI:MGI:5805564|PMID:27760146)
GO_REF:0000107
RGD
Ensembl
PMID:27760146 GO_REF:0000107, MGI:MGI:5805564 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slx4 SLX4 structure-specific endonuclease subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
G Spo11 SPO11, initiator of meiotic double stranded breaks IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:170,991,573...171,008,226
Ensembl chr 3:170,994,038...171,013,185
JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO MGI:MGI:4129733 (MGI:MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:MGI:5700253 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Six6os1 Six6 opposite strand transcript 1 ISO
IBA
(MGI:MGI:5822939|PMID:27796301)
PMID:21873635
RGD PMID:27796301, PMID:21873635 MGI:MGI:5822939, RGD:13792537 NCBI chr 6:95,761,718...95,797,314
Ensembl chr 6:95,762,332...95,796,502
JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:74,697,713...74,724,004
Ensembl chr10:74,697,716...74,724,472
JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata22 spermatogenesis associated 22 ISO MGI:MGI:5314540 (MGI:MGI:5314623|PMID:22011390) RGD PMID:22011390 MGI:MGI:5314623 NCBI chr10:59,893,064...59,910,769
Ensembl chr10:59,879,850...59,911,051
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO
IBA
IEA
MGI:MGI:109542|MGI:MGI:3580000 (MGI:MGI:5315075|PMID:22164254)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:22164254, PMID:21873635 GO_REF:0000107, MGI:MGI:5315075, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO MGI:MGI:105931|MGI:MGI:1913904 (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Tex12 testis expressed 12 ISO MGI:MGI:109542|MGI:MGI:3811722 (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
meiotic mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Msh3 mutS homolog 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:21,790,048...21,931,791
Ensembl chr 2:21,790,044...21,931,720
JBrowse link
G Msh4 mutS homolog 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Msh5 mutS homolog 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,020,690...5,037,125
Ensembl chr20:5,020,667...5,037,088
JBrowse link
G Msh6 mutS homolog 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 ISO MGI:MGI:2178050|MGI:MGI:5511194 (MGI:MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:MGI:5805564 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC095390.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:51,965,417...51,965,779 JBrowse link
G Exo1 exonuclease 1 ISO
IBA
UniProtKB:P43246 (PMID:11809771), (PMID:14636568), (PMID:9788596)
PMID:21873635
RGD PMID:9788596, PMID:11809771, PMID:14636568, PMID:21873635 RGD:13792537 NCBI chr13:93,936,989...93,962,749
Ensembl chr13:93,939,022...93,960,342
JBrowse link
G LOC100362927 replication protein A3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,965,390...51,965,816 JBrowse link
G Mlh1 mutL homolog 1 ISO
IBA
IEA
UniProtKB:P43246|UniProtKB:P52701 (PMID:23603115)
PMID:21873635
GO_REF:0000002
MGI:MGI:1857946|MGI:MGI:1858054|MGI:MGI:1930998 (MGI:MGI:1197799|PMID:9500552), (MGI:MGI:1203882|PMID:9560238), (MGI:MGI:1332740|PMID:10096563), (MGI:MGI:1339254|PMID:10359802), (MGI:MGI:1353727|PMID:10657972), (MGI:MGI:1354996|PMID:10747038), (MGI:MGI:1859717|PMID:10851078), (MGI:MGI:1933705|PMID:11313994), (MGI:MGI:3607956|PMID:16204034), (MGI:MGI:3691360|PMID:10429667), (MGI:MGI:3692242|PMID:16728433), (MGI:MGI:81371|PMID:8674118)
GO_REF:0000107
RGD
InterPro
Ensembl
PMID:8674118, PMID:9500552, PMID:9560238, PMID:10096563, PMID:10359802, PMID:10429667, PMID:10657972, PMID:10747038, PMID:10851078, PMID:11313994, PMID:16204034, PMID:16728433, PMID:23603115, PMID:21873635 GO_REF:0000002, GO_REF:0000107, MGI:MGI:1197799, MGI:MGI:1203882, MGI:MGI:1332740, MGI:MGI:1339254, MGI:MGI:1353727, MGI:MGI:1354996, MGI:MGI:1859717, MGI:MGI:1933705, MGI:MGI:3607956, MGI:MGI:3691360, MGI:MGI:3692242, MGI:MGI:81371, RGD:13792537 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO
IBA
MGI:MGI:104288|MGI:MGI:2384218 (MGI:MGI:3607956|PMID:16204034)
PMID:21873635
RGD PMID:16204034, PMID:21873635 MGI:MGI:3607956, RGD:13792537 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Msh2 mutS homolog 2 IEA
IBA
ISO
GO_REF:0000104
PMID:21873635
MGI:MGI:109519|MGI:MGI:1857940|MGI:MGI:1858055|MGI:MGI:2151801|MGI:MGI:2389314|MGI:MGI:2680817 (MGI:MGI:1096207|PMID:9288110), (MGI:MGI:1275866|PMID:9697842), (MGI:MGI:1350445|PMID:10581038), (MGI:MGI:1861016|PMID:10874005), (MGI:MGI:1889760|PMID:10992298), (MGI:MGI:1926519|PMID:11046134), (MGI:MGI:2176101|PMID:11890935), (MGI:MGI:2388857|PMID:12531017), (MGI:MGI:3029112|PMID:14744764), (MGI:MGI:3692242|PMID:16728433), (MGI:MGI:3703647|PMID:17331550), (MGI:MGI:5464025|PMID:23071719), (MGI:MGI:74950|PMID:7628020), (MGI:MGI:82395|PMID:8706033), (MGI:MGI:87767|PMID:9157971), (MGI:MGI:894568|PMID:9244348)
UniProtKB:P40692|UniProtKB:P52701 (PMID:11555625), (PMID:23603115), (PMID:7923193)
UniProt
RGD
PMID:7628020, PMID:7923193, PMID:8706033, PMID:9157971, PMID:9244348, PMID:9288110, PMID:9697842, PMID:10581038, PMID:10874005, PMID:10992298, PMID:11046134, PMID:11555625, PMID:11890935, PMID:12531017, PMID:14744764, PMID:16728433, PMID:17331550, PMID:23071719, PMID:23603115, PMID:21873635 GO_REF:0000104, MGI:MGI:1096207, MGI:MGI:1275866, MGI:MGI:1350445, MGI:MGI:1861016, MGI:MGI:1889760, MGI:MGI:1926519, MGI:MGI:2176101, MGI:MGI:2388857, MGI:MGI:3029112, MGI:MGI:3692242, MGI:MGI:3703647, MGI:MGI:5464025, MGI:MGI:74950, MGI:MGI:82395, MGI:MGI:87767, MGI:MGI:894568, RGD:13792537 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh3 mutS homolog 3 ISO
IBA
(PMID:8782829)
PMID:21873635
MGI:MGI:101816|MGI:MGI:1343961|MGI:MGI:1858056|MGI:MGI:88039 (MGI:MGI:1353715|PMID:10706084), (MGI:MGI:2154151|PMID:11691815), (MGI:MGI:3692242|PMID:16728433)
RGD PMID:8782829, PMID:10706084, PMID:11691815, PMID:16728433, PMID:21873635 MGI:MGI:1353715, MGI:MGI:2154151, MGI:MGI:3692242, RGD:13792537 NCBI chr 2:21,790,048...21,931,791
Ensembl chr 2:21,790,044...21,931,720
JBrowse link
G Msh5 mutS homolog 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:5,020,690...5,037,125
Ensembl chr20:5,020,667...5,037,088
JBrowse link
G Msh6 mutS homolog 6 ISO
IBA
UniProtKB:P40692|UniProtKB:P43246 (PMID:10871409), (PMID:23603115), (PMID:23622243), (PMID:8782829)
PMID:21873635
MGI:MGI:109519|MGI:MGI:1858014|MGI:MGI:2151803|MGI:MGI:3653701|MGI:MGI:88039 (MGI:MGI:1100204|PMID:9390556), (MGI:MGI:2154151|PMID:11691815), (MGI:MGI:2388851|PMID:12370835), (MGI:MGI:3053495|PMID:15324697), (MGI:MGI:3692242|PMID:16728433), (MGI:MGI:5464025|PMID:23071719)
RGD PMID:8782829, PMID:9390556, PMID:10871409, PMID:11691815, PMID:12370835, PMID:15324697, PMID:16728433, PMID:23071719, PMID:23603115, PMID:23622243, PMID:21873635 MGI:MGI:1100204, MGI:MGI:2154151, MGI:MGI:2388851, MGI:MGI:3053495, MGI:MGI:3692242, MGI:MGI:5464025, RGD:13792537 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Mutyh mutY DNA glycosylase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Pcna proliferating cell nuclear antigen ISO
IBA
(PMID:11005803)
PMID:21873635
RGD PMID:11005803, PMID:21873635 RGD:13792537 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component ISO
IBA
MGI:MGI:1857948 (MGI:MGI:1197799|PMID:9500552)
PMID:21873635
RGD PMID:9500552, PMID:21873635 MGI:MGI:1197799, RGD:13792537 NCBI chr 9:53,120,656...53,206,520
Ensembl chr 9:53,120,656...53,206,516
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO
IBA
(PMID:10871409), (PMID:23709753), (PMID:9618520)
PMID:21873635
MGI:MGI:1353455|MGI:MGI:1857946|MGI:MGI:1857947 (MGI:MGI:1197799|PMID:9500552), (MGI:MGI:1339254|PMID:10359802), (MGI:MGI:1933705|PMID:11313994), (MGI:MGI:3607956|PMID:16204034), (MGI:MGI:3691360|PMID:10429667), (MGI:MGI:3692242|PMID:16728433), (MGI:MGI:5464025|PMID:23071719)
RGD PMID:9500552, PMID:9618520, PMID:10359802, PMID:10429667, PMID:10871409, PMID:11313994, PMID:16204034, PMID:16728433, PMID:23071719, PMID:23709753, PMID:21873635 MGI:MGI:1197799, MGI:MGI:1339254, MGI:MGI:1933705, MGI:MGI:3607956, MGI:MGI:3691360, MGI:MGI:3692242, MGI:MGI:5464025, RGD:13792537 NCBI chr12:12,714,394...12,738,654
Ensembl chr12:12,714,394...12,738,641
JBrowse link
G Rnaseh2a ribonuclease H2, subunit A ISO
IBA
(PMID:23603115)
PMID:21873635
(MGI:MGI:5499950|PMID:23603115)
RGD PMID:23603115, PMID:21873635 MGI:MGI:5499950, RGD:13792537 NCBI chr19:26,074,980...26,084,780
Ensembl chr19:26,074,987...26,084,679
JBrowse link
G Rpa1 replication protein A1 ISO (PMID:9430682) RGD PMID:9430682 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rpa2 replication protein A2 ISO
ISS
(PMID:9430682)
GO_REF:0000024
RGD
UniProt
PMID:9430682 GO_REF:0000024 NCBI chr 5:150,957,041...150,967,597
Ensembl chr 5:150,957,001...150,968,269
JBrowse link
G Rpa3 replication protein A3 ISO
IBA
(PMID:9430682)
PMID:21873635
RGD PMID:9430682, PMID:21873635 RGD:13792537 NCBI chr 4:34,279,320...34,282,351
Ensembl chr 4:34,279,320...34,282,351
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO (PMID:23622243) RGD PMID:23622243 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Tdg thymine-DNA glycosylase ISO (PMID:22573813) RGD PMID:22573813 NCBI chr 7:27,194,000...27,213,676
Ensembl chr 7:27,193,998...27,214,236
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor ISO (PMID:26300262)
(MGI:MGI:5705200|PMID:26300262)
RGD PMID:26300262 MGI:MGI:5705200 NCBI chr20:34,818,093...34,930,157
Ensembl chr20:34,846,804...34,929,965
JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ISO (MGI:MGI:5516376|PMID:24101517) RGD PMID:24101517 MGI:MGI:5516376 NCBI chr 4:123,108,924...123,118,186
Ensembl chr 4:123,108,925...123,118,186
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Lig3 DNA ligase 3 ISO
IBA
(PMID:21390132)
PMID:21873635
(MGI:MGI:4943977|PMID:21390132), (MGI:MGI:4943978|PMID:21390131)
RGD PMID:21390131, PMID:21390132, PMID:21873635 MGI:MGI:4943977, MGI:MGI:4943978, RGD:13792537 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:138,397,925...138,406,672
Ensembl chr 3:138,398,011...138,406,666
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Primpol primase and DNA directed polymerase ISO (MGI:MGI:6393030|PMID:29073063) RGD PMID:29073063 MGI:MGI:6393030 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Slc25a16 solute carrier family 25 member 16 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:3528279 (MGI:MGI:5516376|PMID:24101517) RGD PMID:24101517 MGI:MGI:5516376 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps3 ribosomal protein S3 ISO (PMID:17049931) RGD PMID:17049931 NCBI chr 1:164,435,868...164,441,167
Ensembl chr 1:164,435,878...164,441,167
JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO
IBA
ISS
(PMID:20725033)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20725033, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:222,451,674...222,459,952
Ensembl chr 1:222,451,674...222,459,952
JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:127,282,445...127,301,086
Ensembl chr 6:127,282,466...127,301,083
JBrowse link
G Rnf169 ring finger protein 169 ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721, PMID:22733822, PMID:22742833 NCBI chr 1:164,917,069...164,978,061
Ensembl chr 1:164,922,080...164,977,633
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:92,305,059...92,435,388
Ensembl chr 9:92,305,051...92,435,365
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase ISO
IBA
(PMID:30356214)
PMID:21873635
(MGI:MGI:6241455|PMID:30356214)
RGD PMID:30356214, PMID:21873635 MGI:MGI:6241455, RGD:13792537 NCBI chr 8:85,789,515...85,804,008
Ensembl chr 8:85,789,763...85,803,433
JBrowse link
G Fancb FA complementation group B ISO
IBA
MGI:MGI:2156841 (MGI:MGI:5648586|PMID:25520194)
PMID:21873635
RGD PMID:25520194, PMID:21873635 MGI:MGI:5648586, RGD:13792537 NCBI chr  X:31,124,018...31,140,790
Ensembl chr  X:31,124,018...31,140,711
JBrowse link
G Fbh1 F-box DNA helicase 1 ISO (PMID:19736316)
(MGI:MGI:5566975|PMID:24108124)
RGD PMID:19736316, PMID:24108124 MGI:MGI:5566975 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Helb DNA helicase B ISO
IBA
(PMID:26774285)
PMID:21873635
(MGI:MGI:5766842|PMID:26774285)
RGD PMID:26774285, PMID:21873635 MGI:MGI:5766842, RGD:13792537 NCBI chr 7:64,860,641...64,888,146
Ensembl chr 7:64,860,666...64,887,448
JBrowse link
G Klhl15 kelch-like family member 15 ISO (PMID:27561354) RGD PMID:27561354 NCBI chr  X:63,342,277...63,390,915
Ensembl chr  X:63,343,546...63,389,989
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Parpbp PARP1 binding protein ISO
IBA
IEA
ISS
(PMID:22153967)
PMID:21873635
GO_REF:0000002
GO_REF:0000024
RGD
InterPro
UniProt
PMID:22153967, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr 7:28,654,707...28,724,412
Ensembl chr 7:28,654,707...28,715,224
JBrowse link
G Polq DNA polymerase theta ISO (PMID:25642963)
(MGI:MGI:5621198|PMID:25642960)
RGD PMID:25642960, PMID:25642963 MGI:MGI:5621198 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked ISO
ISS
(PMID:28735897)
GO_REF:0000024
RGD
UniProt
PMID:28735897 GO_REF:0000024 NCBI chr  X:110,670,037...110,782,420
Ensembl chr  X:110,670,119...110,782,284
JBrowse link
G Recql5 RecQ like helicase 5 ISO MGI:MGI:2448558 (MGI:MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:MGI:5648586 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (PMID:23333306)
(MGI:MGI:5468037|PMID:23306437), (MGI:MGI:5476381|PMID:23333305)
RGD PMID:23306437, PMID:23333305, PMID:23333306 MGI:MGI:5468037, MGI:MGI:5476381 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
G Rmi2 RecQ mediated genome instability 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:4,904,458...4,910,339
Ensembl chr10:4,905,210...4,910,305
JBrowse link
G Shld1 shieldin complex subunit 1 ISO
IBA
(PMID:29656893)
PMID:21873635
RGD PMID:29656893, PMID:21873635 RGD:13792537 NCBI chr 3:125,318,682...125,396,705
Ensembl chr 3:125,320,680...125,396,821
JBrowse link
G Shld2 shieldin complex subunit 2 ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:10,570,307...10,661,528
Ensembl chr16:10,570,314...10,661,528
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO (PMID:23333306), (PMID:23345425)
(MGI:MGI:5476381|PMID:23333305), (MGI:MGI:5887194|PMID:20362325)
RGD PMID:20362325, PMID:23333305, PMID:23333306, PMID:23345425 MGI:MGI:5476381, MGI:MGI:5887194 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:30612738) RGD PMID:30612738 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035
JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein ISO
ISS
(PMID:29042561)
GO_REF:0000024
RGD
UniProt
PMID:29042561 GO_REF:0000024 NCBI chr 5:152,721,799...152,734,577
Ensembl chr 5:152,721,940...152,734,572
JBrowse link
G Cyren cell cycle regulator of NHEJ ISO
ISS
(PMID:28959974)
GO_REF:0000024
RGD
UniProt
PMID:28959974 GO_REF:0000024 NCBI chr 4:62,391,770...62,397,162
Ensembl chr 4:62,391,770...62,396,035
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:19549901)
GO_REF:0000024
RGD
UniProt
PMID:19549901 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1