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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of transcription by RNA polymerase I
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Accession:GO:0006356 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase I.
Synonyms:exact_synonym: regulation of transcription from Pol I promoter;   regulation of transcription from RNA polymerase I promoter


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regulation of transcription by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnc1 basonuclin 1 JBrowse link 1
1
143,793,280
143,869,440
143,818,748
143,878,077
RGD:1624291
negative regulation of transcription by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baz2a bromodomain adjacent to zinc finger domain, 2A JBrowse link 7 2,518,267 2,548,840 RGD:1624291
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
G Maf1 MAF1 homolog, negative regulator of RNA polymerase III JBrowse link 7 117,417,643 117,420,722 RGD:1624291
negative regulation of transcription elongation by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pou4f1 POU class 4 homeobox 1 JBrowse link 15 88,618,255 88,622,712 RGD:1624291
RGD:1600115
negative regulation of transcription of nucleolar large rRNA by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dedd death effector domain-containing JBrowse link 13 89,706,932 89,721,825 RGD:1624291
G Macroh2a1 macroH2A.1 histone JBrowse link 17 9,282,109 9,344,698 RGD:1624291
G Macroh2a2 macroH2A.2 histone JBrowse link 20 31,352,924 31,402,483 RGD:1624291
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
positive regulation of transcription by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:1624291
G Dhx33 DEAH-box helicase 33 JBrowse link 10 57,622,022 57,638,485 RGD:1624291
RGD:13792537
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 4 98,648,513 98,709,695 RGD:1624291
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:1624291
RGD:1600115
G Heatr1 HEAT repeat containing 1 JBrowse link 17 66,446,135 66,488,303 RGD:1624291
RGD:13792537
G LOC108348069 HEAT repeat-containing protein 1 JBrowse link 17 66,578,885 66,619,465 RGD:13792537
G Phf8 PHD finger protein 8 JBrowse link X 21,063,487 21,168,750 RGD:1624291
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A JBrowse link 1 101,511,899 101,515,043 RGD:1624291
G Rasl11a RAS-like family 11 member A JBrowse link 12 9,986,150 9,990,284 RGD:1624291
RGD:1600115
G Ubtf upstream binding transcription factor JBrowse link 10 90,250,275 90,265,772 RGD:1624291
RGD:1600115
G Utp15 UTP15, small subunit processome component JBrowse link 2 28,351,925 28,370,315 RGD:1624291
RGD:13792537
G Wdr43 WD repeat domain 43 JBrowse link 6 23,433,532 23,473,179 RGD:1624291
G Wdr75 WD repeat domain 75 JBrowse link 9 52,687,845 52,717,808 RGD:1624291
positive regulation of transcription of nucleolar large rRNA by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx11 DEAD/H-box helicase 11 JBrowse link 9 114,113,642 114,133,908 RGD:1624291
G Ippk inositol-pentakisphosphate 2-kinase JBrowse link 17 15,604,148 15,643,312 RGD:1600115
RGD:1624291
G Mars1 methionyl-tRNA synthetase 1 JBrowse link 7 70,585,011 70,602,425 RGD:1624291
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1624291
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:1600115
RGD:1624291
G Nol11 nucleolar protein 11 JBrowse link 10 95,388,223 95,408,053 RGD:1624291
G Pih1d1 PIH1 domain containing 1 JBrowse link 1 101,151,240 101,156,806 RGD:1624291
G Pwp1 PWP1 homolog, endonuclein JBrowse link 7 23,988,776 24,004,774 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
RGD:1600115
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 20 13,679,955 13,702,821 RGD:1624291
regulation of termination of RNA polymerase I transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zmpste24 zinc metallopeptidase STE24 JBrowse link 5 139,982,404 140,015,541 RGD:1624291
regulation of transcription of nucleolar large rRNA by RNA polymerase I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt7 sirtuin 7 JBrowse link 10 109,796,046 109,802,821 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      regulation of metabolic process 6886
        regulation of macromolecule metabolic process 6375
          regulation of gene expression 4685
            regulation of transcription, DNA-templated 3182
              regulation of transcription by RNA polymerase I 34
                negative regulation of transcription by RNA polymerase I + 8
                positive regulation of transcription by RNA polymerase I + 23
                regulation of termination of RNA polymerase I transcription + 1
                regulation of transcription elongation from RNA polymerase I promoter + 1
                regulation of transcription initiation from RNA polymerase I promoter 0
                regulation of transcription of nucleolar large rRNA by RNA polymerase I + 15
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      cellular metabolic process 10918
        cellular aromatic compound metabolic process 5567
          nucleobase-containing compound metabolic process 5344
            nucleic acid metabolic process 4850
              RNA metabolic process 4347
                RNA biosynthetic process 3361
                  nucleic acid-templated transcription 3349
                    transcription, DNA-templated 3302
                      regulation of transcription, DNA-templated 3182
                        regulation of transcription by RNA polymerase I 34
                          negative regulation of transcription by RNA polymerase I + 8
                          positive regulation of transcription by RNA polymerase I + 23
                          regulation of termination of RNA polymerase I transcription + 1
                          regulation of transcription elongation from RNA polymerase I promoter + 1
                          regulation of transcription initiation from RNA polymerase I promoter 0
                          regulation of transcription of nucleolar large rRNA by RNA polymerase I + 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.