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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of transcription by RNA polymerase II
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Accession:GO:0006357 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
Synonyms:exact_synonym: regulation of transcription from Pol II promoter;   regulation of transcription from RNA polymerase II promoter
 related_synonym: global transcription regulation from Pol II promoter;   regulation of gene-specific transcription from RNA polymerase II promoter;   regulation of global transcription from Pol II promoter;   regulation of transcription from RNA polymerase II promoter, global
 alt_id: GO:0006358;   GO:0010551


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Path 1
Term Annotations click to browse term
  biological_process 19245
    metabolic process 11438
      regulation of metabolic process 6410
        regulation of macromolecule metabolic process 5912
          regulation of gene expression 4132
            regulation of transcription, DNA-templated 3104
              regulation of transcription by RNA polymerase II 2076
                BMP signaling pathway + 171
                carbon catabolite regulation of transcription from RNA polymerase II promoter + 4
                dephosphorylation of RNA polymerase II C-terminal domain 5
                negative regulation of transcription by RNA polymerase II + 904
                nitrogen catabolite regulation of transcription from RNA polymerase II promoter + 0
                phosphorylation of RNA polymerase II C-terminal domain + 12
                positive regulation of androgen receptor activity 4
                positive regulation of transcription by RNA polymerase II + 1299
                regulation of BMP signaling pathway + 98
                regulation of SREBP signaling pathway + 2
                regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter + 2
                regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter + 0
                regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter + 0
                regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter + 10
                regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter 0
                regulation of lipid transport by regulation of transcription from RNA polymerase II promoter + 4
                regulation of mating-type specific transcription from RNA polymerase II promoter + 0
                regulation of nodal signaling pathway involved in determination of left/right asymmetry + 4
                regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter + 0
                regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter 0
                regulation of phosphorylation of RNA polymerase II C-terminal domain + 3
                regulation of pri-miRNA transcription by RNA polymerase II + 48
                regulation of ribosomal protein gene transcription by RNA polymerase II + 0
                regulation of snRNA transcription by RNA polymerase II + 1
                regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter 0
                regulation of telomeric RNA transcription from RNA pol II promoter + 1
                regulation of termination of RNA polymerase II transcription + 3
                regulation of transcription elongation from RNA polymerase II promoter + 38
                regulation of transcription from RNA polymerase II promoter by pheromones + 0
                regulation of transcription from RNA polymerase II promoter in response to copper ion 2
                regulation of transcription from RNA polymerase II promoter in response to iron + 3
                regulation of transcription from RNA polymerase II promoter in response to stress + 56
                regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry + 6
                regulation of transcription from RNA polymerase II promoter involved in heart development + 14
                regulation of transcription from RNA polymerase II promoter involved in kidney development + 2
                regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle + 0
                regulation of transcription from RNA polymerase II promoter involved in spermatogenesis 1
                regulation of transcription initiation from RNA polymerase II promoter + 34
                regulation of transcription involved in anterior/posterior axis specification 1
                regulation of transcription involved in cell fate commitment + 18
Path 2
Term Annotations click to browse term
  biological_process 19245
    metabolic process 11438
      cellular metabolic process 10461
        cellular aromatic compound metabolic process 5385
          nucleobase-containing compound metabolic process 5163
            nucleic acid metabolic process 4679
              RNA metabolic process 4191
                RNA biosynthetic process 3276
                  nucleic acid-templated transcription 3264
                    transcription, DNA-templated 3217
                      regulation of transcription, DNA-templated 3104
                        regulation of transcription by RNA polymerase II 2076
                          BMP signaling pathway + 171
                          carbon catabolite regulation of transcription from RNA polymerase II promoter + 4
                          dephosphorylation of RNA polymerase II C-terminal domain 5
                          negative regulation of transcription by RNA polymerase II + 904
                          nitrogen catabolite regulation of transcription from RNA polymerase II promoter + 0
                          phosphorylation of RNA polymerase II C-terminal domain + 12
                          positive regulation of androgen receptor activity 4
                          positive regulation of transcription by RNA polymerase II + 1299
                          regulation of BMP signaling pathway + 98
                          regulation of SREBP signaling pathway + 2
                          regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter + 2
                          regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter + 0
                          regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter + 0
                          regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter + 10
                          regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter 0
                          regulation of lipid transport by regulation of transcription from RNA polymerase II promoter + 4
                          regulation of mating-type specific transcription from RNA polymerase II promoter + 0
                          regulation of nodal signaling pathway involved in determination of left/right asymmetry + 4
                          regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter + 0
                          regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter 0
                          regulation of phosphorylation of RNA polymerase II C-terminal domain + 3
                          regulation of pri-miRNA transcription by RNA polymerase II + 48
                          regulation of ribosomal protein gene transcription by RNA polymerase II + 0
                          regulation of snRNA transcription by RNA polymerase II + 1
                          regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter 0
                          regulation of telomeric RNA transcription from RNA pol II promoter + 1
                          regulation of termination of RNA polymerase II transcription + 3
                          regulation of transcription elongation from RNA polymerase II promoter + 38
                          regulation of transcription from RNA polymerase II promoter by pheromones + 0
                          regulation of transcription from RNA polymerase II promoter in response to copper ion 2
                          regulation of transcription from RNA polymerase II promoter in response to iron + 3
                          regulation of transcription from RNA polymerase II promoter in response to stress + 56
                          regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry + 6
                          regulation of transcription from RNA polymerase II promoter involved in heart development + 14
                          regulation of transcription from RNA polymerase II promoter involved in kidney development + 2
                          regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle + 0
                          regulation of transcription from RNA polymerase II promoter involved in spermatogenesis 1
                          regulation of transcription initiation from RNA polymerase II promoter + 34
                          regulation of transcription involved in anterior/posterior axis specification 1
                          regulation of transcription involved in cell fate commitment + 18
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.