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ONTOLOGY REPORT - ANNOTATIONS


Term:transcription by RNA polymerase II
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Accession:GO:0006366 term browser browse the term
Definition:The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
Comment:Changed class label as requested in https://github.com/geneontology/go-ontology/issues/14854
Synonyms:exact_synonym: transcription from Pol II promoter;   transcription from RNA polymerase II promoter
 related_synonym: RNA polymerase II transcription factor activity;   gene-specific transcription from RNA polymerase II promoter;   general transcription from RNA polymerase II promoter;   specific transcription from RNA polymerase II promoter
 alt_id: GO:0032568;   GO:0032569


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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19317
    metabolic process 11540
      organic substance metabolic process 10932
        macromolecule metabolic process 9412
          gene expression 5523
            transcription, DNA-templated 3296
              transcription by RNA polymerase II 2170
                mRNA transcription by RNA polymerase II 19
                negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter + 0
                negative regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter + 0
                negative regulation of transcription by RNA polymerase II + 911
                positive regulation of DNA repair by transcription from RNA polymerase II promoter + 0
                positive regulation of flocculation via cell wall protein-carbohydrate interaction by transcription from RNA polymerase II promoter 0
                positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter 0
                positive regulation of transcription by RNA polymerase II + 1310
                pri-miRNA transcription by RNA polymerase II + 54
                promoter clearance from RNA polymerase II promoter 0
                regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter 0
                regulation of phenotypic switching by transcription from RNA polymerase II promoter 0
                regulation of transcription by RNA polymerase II + 2103
                regulation of transport by transcription from RNA polymerase II promoter + 0
                snRNA transcription by RNA polymerase II + 9
                snoRNA transcription by RNA polymerase II 0
                telomeric repeat-containing RNA transcription by RNA polymerase II + 1
                termination of RNA polymerase II transcription + 6
                transcription elongation from RNA polymerase II promoter + 61
                transcription initiation from RNA polymerase II promoter + 73
Path 2
Term Annotations click to browse term
  biological_process 19317
    metabolic process 11540
      organic substance metabolic process 10932
        organic cyclic compound metabolic process 5695
          nucleobase-containing compound metabolic process 5264
            nucleic acid metabolic process 4780
              RNA metabolic process 4290
                RNA biosynthetic process 3356
                  nucleic acid-templated transcription 3344
                    transcription, DNA-templated 3296
                      transcription by RNA polymerase II 2170
                        mRNA transcription by RNA polymerase II 19
                        negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter + 0
                        negative regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter + 0
                        negative regulation of transcription by RNA polymerase II + 911
                        positive regulation of DNA repair by transcription from RNA polymerase II promoter + 0
                        positive regulation of flocculation via cell wall protein-carbohydrate interaction by transcription from RNA polymerase II promoter 0
                        positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter 0
                        positive regulation of transcription by RNA polymerase II + 1310
                        pri-miRNA transcription by RNA polymerase II + 54
                        promoter clearance from RNA polymerase II promoter 0
                        regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter 0
                        regulation of phenotypic switching by transcription from RNA polymerase II promoter 0
                        regulation of transcription by RNA polymerase II + 2103
                        regulation of transport by transcription from RNA polymerase II promoter + 0
                        snRNA transcription by RNA polymerase II + 9
                        snoRNA transcription by RNA polymerase II 0
                        telomeric repeat-containing RNA transcription by RNA polymerase II + 1
                        termination of RNA polymerase II transcription + 6
                        transcription elongation from RNA polymerase II promoter + 61
                        transcription initiation from RNA polymerase II promoter + 73
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.