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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA processing
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Accession:GO:0006396 term browser browse the term
Definition:Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Synonyms:alt_id: GO:0006394
 xref: Wikipedia:Post-transcriptional_modification


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RNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adad1 adenosine deaminase domain containing 1 (testis specific) JBrowse link 3 37,063,656 37,111,512 RGD:2290270
G Adad2 adenosine deaminase domain containing 2 JBrowse link 8 119,612,710 119,616,926 RGD:2290270
G Adar adenosine deaminase, RNA-specific JBrowse link 3 89,714,469 89,753,455 RGD:2290270
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 10 77,290,727 77,418,292 RGD:2290270
G Adarb2 adenosine deaminase, RNA-specific, B2 JBrowse link 13 8,202,526 8,768,762 RGD:2290270
G Adat1 adenosine deaminase, tRNA-specific 1 JBrowse link 8 111,958,920 111,992,307 RGD:2290270
G Ccnl1 cyclin L1 JBrowse link 3 65,945,908 65,962,029 RGD:2290270
G Cherp calcium homeostasis endoplasmic reticulum protein JBrowse link 8 72,460,483 72,475,233 RGD:2290270
G Clp1 CLP1, cleavage and polyadenylation factor I subunit JBrowse link 2 84,723,122 84,727,287 RGD:2290270
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 2 145,917,482 145,934,700 RGD:2290270
G Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 JBrowse link 2 104,590,484 104,665,425 RGD:2290270
G Ddx54 DEAD box helicase 54 JBrowse link 5 120,613,082 120,628,592 RGD:2290270
G Dicer1 dicer 1, ribonuclease type III JBrowse link 12 104,687,740 104,751,968 RGD:2290270
G Dkc1 dyskeratosis congenita 1, dyskerin JBrowse link X 75,095,854 75,109,776 RGD:2290270
G Drosha drosha, ribonuclease type III JBrowse link 15 12,824,804 12,935,291 RGD:2290270
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 4 110,203,737 110,351,939 RGD:2290270
G Exosc1 exosome component 1 JBrowse link 19 41,922,978 41,933,423 RGD:2290270
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Exosc8 exosome component 8 JBrowse link 3 54,728,679 54,735,364 RGD:2290270
G Exosc9 exosome component 9 JBrowse link 3 36,552,606 36,565,727 RGD:2290270
G Grsf1 G-rich RNA sequence binding factor 1 JBrowse link 5 88,659,233 88,676,171 RGD:2290270
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 13 58,391,132 58,403,343 RGD:2290270
G Hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1 JBrowse link 7 25,721,161 25,756,268 RGD:2290270
G Larp6 La ribonucleoprotein domain family, member 6 JBrowse link 9 60,713,121 60,738,801 RGD:2290270
G Larp7 La ribonucleoprotein domain family, member 7 JBrowse link 3 127,536,714 127,553,349 RGD:2290270
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 70,673,231 70,678,752 RGD:2290270
G M1ap meiosis 1 associated protein JBrowse link 6 82,946,908 83,030,309 RGD:2290270
G Mrm1 mitochondrial rRNA methyltransferase 1 JBrowse link 11 84,813,061 84,819,515 RGD:2290270
G Mrm3 mitochondrial rRNA methyltransferase 3 JBrowse link 11 76,243,736 76,250,625 RGD:2290270
G Mrpl44 mitochondrial ribosomal protein L44 JBrowse link 1 79,776,018 79,781,445 RGD:2290270
G Nol9 nucleolar protein 9 JBrowse link 4 152,039,261 152,061,494 RGD:2290270
G Nrde2 nrde-2 necessary for RNA interference, domain containing JBrowse link 12 100,125,450 100,160,414 RGD:2290270
G Pdcd11 programmed cell death 11 JBrowse link 19 47,090,735 47,131,146 RGD:2290270
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
G Pop4 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) JBrowse link 7 38,262,812 38,271,393 RGD:2290270
G Prpf39 pre-mRNA processing factor 39 JBrowse link 12 65,036,334 65,063,386 RGD:2290270
G Prpf6 pre-mRNA splicing factor 6 JBrowse link 2 181,601,319 181,655,661 RGD:2290270
G Rcl1 RNA terminal phosphate cyclase-like 1 JBrowse link 19 29,101,375 29,143,851 RGD:2290270
G Rnasel ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) JBrowse link 1 153,749,344 153,768,690 RGD:2290270
G Rngtt RNA guanylyltransferase and 5'-phosphatase JBrowse link 4 33,310,300 33,502,614 RGD:2290270
G Rnu7 U7 small nuclear RNA JBrowse link 6 124,741,225 124,741,286 RGD:2290270
G Rtca RNA 3'-terminal phosphate cyclase JBrowse link 3 116,488,963 116,508,203 RGD:2290270
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase JBrowse link 10 85,938,637 85,957,793 RGD:2290270
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 JBrowse link 5 113,742,444 113,772,400 RGD:2290270
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 11 4,160,354 4,182,541 RGD:2290270
G Sfswap splicing factor SWAP JBrowse link 5 129,501,231 129,571,384 RGD:2290270
G Snrpd1 small nuclear ribonucleoprotein D1 JBrowse link 18 10,617,796 10,628,230 RGD:2290270
G Snrpd3 small nuclear ribonucleoprotein D3 JBrowse link 10 75,518,042 75,535,440 RGD:2290270
G Ssb Sjogren syndrome antigen B JBrowse link 2 69,861,562 69,871,846 RGD:2290270
G Sugp1 SURP and G patch domain containing 1 JBrowse link 8 70,042,769 70,072,347 RGD:2290270
G Sugp2 SURP and G patch domain containing 2 JBrowse link 8 70,234,188 70,263,105 RGD:2290270
G Tmtc1 transmembrane and tetratricopeptide repeat containing 1 JBrowse link 6 148,232,430 148,444,770 RGD:2290270
G Trmt2a TRM2 tRNA methyltransferase 2A JBrowse link 16 18,248,847 18,254,772 RGD:2290270
G Trmt2b TRM2 tRNA methyltransferase 2B JBrowse link X 134,222,955 134,277,023 RGD:2290270
G Trnt1 tRNA nucleotidyl transferase, CCA-adding, 1 JBrowse link 6 106,769,138 106,782,474 RGD:2290270
G Trub1 TruB pseudouridine (psi) synthase family member 1 JBrowse link 19 57,452,892 57,491,005 RGD:2290270
G Trub2 TruB pseudouridine (psi) synthase family member 2 JBrowse link 2 29,761,223 29,787,671 RGD:2290270
G U2surp U2 snRNP-associated SURP domain containing JBrowse link 9 95,456,894 95,511,996 RGD:2290270
G Utp6 UTP6 small subunit processome component JBrowse link 11 79,933,956 79,962,387 RGD:2290270
G Wbp11 WW domain binding protein 11 JBrowse link 6 136,813,654 136,828,216 RGD:2290270
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 JBrowse link 14 47,240,944 47,276,861 RGD:2290270
G Xab2 XPA binding protein 2 JBrowse link 8 3,610,087 3,621,334 RGD:2290270
G Xrn1 5'-3' exoribonuclease 1 JBrowse link 9 95,954,750 96,057,806 RGD:2290270
7-methylguanosine cap hypermethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tgs1 trimethylguanosine synthase 1 JBrowse link 4 3,574,841 3,616,624 RGD:2290270
7-methylguanosine mRNA capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmtr1 cap methyltransferase 1 JBrowse link 17 29,660,595 29,705,979 RGD:2290270
G Cmtr2 cap methyltransferase 2 JBrowse link 8 110,215,346 110,224,489 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncbp3 nuclear cap binding subunit 3 JBrowse link 11 73,047,867 73,083,579 RGD:2290270
G Ramac RNA guanine-7 methyltransferase activating subunit JBrowse link 7 81,762,953 81,769,490 RGD:2290270
G Rngtt RNA guanylyltransferase and 5'-phosphatase JBrowse link 4 33,310,300 33,502,614 RGD:2290270
G Rnmt RNA (guanine-7-) methyltransferase JBrowse link 18 68,300,233 68,324,852 RGD:2290270
7-methylguanosine RNA capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tgs1 trimethylguanosine synthase 1 JBrowse link 4 3,574,841 3,616,624 RGD:2290270
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk13 cyclin-dependent kinase 13 JBrowse link 13 17,711,676 17,805,212 RGD:2290270
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 25,477,620 25,754,520 RGD:9068941
G Ddx17 DEAD box helicase 17 JBrowse link 15 79,527,696 79,546,764 RGD:2290270
G Ddx5 DEAD box helicase 5 JBrowse link 11 106,780,355 106,789,185 RGD:2290270
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 JBrowse link 1 153,455,756 153,487,688 RGD:2290270
G Esrp1 epithelial splicing regulatory protein 1 JBrowse link 4 11,331,933 11,386,783 RGD:2290270
G Esrp2 epithelial splicing regulatory protein 2 JBrowse link 8 106,130,319 106,137,193 RGD:2290270
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 15 103,239,943 103,246,698 RGD:2290270
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 17 33,646,233 33,685,458 RGD:2290270
G Insr insulin receptor JBrowse link 8 3,150,922 3,279,649 RGD:9068941
G Kdm1a lysine (K)-specific demethylase 1A JBrowse link 4 136,550,533 136,602,787 RGD:9068941
G Mbnl1 muscleblind like splicing factor 1 JBrowse link 3 60,472,559 60,629,750 RGD:2290270
G Pqbp1 polyglutamine binding protein 1 JBrowse link X 7,894,519 7,899,269 RGD:2290270
G Puf60 poly-U binding splicing factor 60 JBrowse link 15 76,070,182 76,082,537 RGD:2290270
G Rbm17 RNA binding motif protein 17 JBrowse link 2 11,585,439 11,603,199 RGD:2290270
G Rsrc1 arginine/serine-rich coiled-coil 1 JBrowse link 3 66,981,364 67,358,403 RGD:2290270
G Scnm1 sodium channel modifier 1 JBrowse link 3 95,129,719 95,134,050 RGD:2290270
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) JBrowse link 4 127,020,716 127,051,101 RGD:2290270
G Sfswap splicing factor SWAP JBrowse link 5 129,501,231 129,571,384 RGD:2290270
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) JBrowse link 11 43,433,726 43,447,982 RGD:2290270
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:2290270
G Srsf6 serine and arginine-rich splicing factor 6 JBrowse link 2 162,931,508 162,937,121 RGD:2290270
box C/D snoRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbl fibrillarin JBrowse link 7 28,168,893 28,179,269 RGD:2290270
G Fbll1 fibrillarin-like 1 JBrowse link 11 35,797,380 35,798,884 RGD:2290270
G Larp7 La ribonucleoprotein domain family, member 7 JBrowse link 3 127,536,714 127,553,349 RGD:2290270
box H/ACA snoRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkc1 dyskeratosis congenita 1, dyskerin JBrowse link X 75,095,854 75,109,776 RGD:2290270
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) JBrowse link 16 13,537,964 13,668,198 RGD:2290270
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bop1 block of proliferation 1 JBrowse link 15 76,452,988 76,477,249 RGD:2290270
G Nol9 nucleolar protein 9 JBrowse link 4 152,039,261 152,061,494 RGD:2290270
G Npm1 nucleophosmin 1 JBrowse link 11 33,152,498 33,164,142 RGD:2290270
cleavage involved in rRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nhp2 NHP2 ribonucleoprotein JBrowse link 11 51,619,773 51,623,718 RGD:2290270
G Nob1 NIN1/RPN12 binding protein 1 homolog JBrowse link 8 107,412,489 107,425,038 RGD:2290270
G Rrp36 ribosomal RNA processing 36 JBrowse link 17 46,666,323 46,674,326 RGD:2290270
conversion of ds siRNA to ss siRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dicer1 dicer 1, ribonuclease type III JBrowse link 12 104,687,740 104,751,968 RGD:2290270
conversion of ds siRNA to ss siRNA involved in RNA interference term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dicer1 dicer 1, ribonuclease type III JBrowse link 12 104,687,740 104,751,968 RGD:2290270
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtfmt mitochondrial methionyl-tRNA formyltransferase JBrowse link 9 65,435,782 65,453,054 RGD:2290270
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 13 23,418,361 23,423,866 RGD:2290270
G Fcf1 FCF1 rRNA processing protein JBrowse link 12 84,970,930 84,983,303 RGD:2290270
G Rcl1 RNA terminal phosphate cyclase-like 1 JBrowse link 19 29,101,375 29,143,851 RGD:2290270
G Tbl3 transducin (beta)-like 3 JBrowse link 17 24,700,653 24,707,653 RGD:2290270
G Utp23 UTP23 small subunit processome component JBrowse link 15 51,877,441 51,884,622 RGD:2290270
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 13 23,418,361 23,423,866 RGD:2290270
G Fcf1 FCF1 rRNA processing protein JBrowse link 12 84,970,930 84,983,303 RGD:2290270
G Kri1 KRI1 homolog JBrowse link 9 21,273,457 21,287,969 RGD:2290270
G Rcl1 RNA terminal phosphate cyclase-like 1 JBrowse link 19 29,101,375 29,143,851 RGD:2290270
G Rpp40 ribonuclease P 40 subunit JBrowse link 13 35,895,104 35,911,565 RGD:2290270
G Rps21 ribosomal protein S21 JBrowse link 2 180,257,379 180,258,444 RGD:2290270
G Rrs1 ribosome biogenesis regulator 1 JBrowse link 1 9,545,408 9,547,455 RGD:2290270
endonucleolytic cleavage involved in tRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpp40 ribonuclease P 40 subunit JBrowse link 13 35,895,104 35,911,565 RGD:2290270
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bms1 BMS1, ribosome biogenesis factor JBrowse link 6 118,383,381 118,419,802 RGD:2290270
G Rcl1 RNA terminal phosphate cyclase-like 1 JBrowse link 19 29,101,375 29,143,851 RGD:2290270
G Tsr1 TSR1 20S rRNA accumulation JBrowse link 11 74,898,080 74,909,340 RGD:2290270
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rps21 ribosomal protein S21 JBrowse link 2 180,257,379 180,258,444 RGD:2290270
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 13 23,418,361 23,423,866 RGD:2290270
G Tbl3 transducin (beta)-like 3 JBrowse link 17 24,700,653 24,707,653 RGD:2290270
enzyme-directed rRNA pseudouridine synthesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkc1 dyskeratosis congenita 1, dyskerin JBrowse link X 75,095,854 75,109,776 RGD:2290270
G Rpusd1 RNA pseudouridylate synthase domain containing 1 JBrowse link 17 25,727,703 25,731,464 RGD:2290270
G Rpusd2 RNA pseudouridylate synthase domain containing 2 JBrowse link 2 119,034,790 119,042,198 RGD:2290270
G Rpusd3 RNA pseudouridylate synthase domain containing 3 JBrowse link 6 113,415,319 113,419,348 RGD:2290270
G Rpusd4 RNA pseudouridylate synthase domain containing 4 JBrowse link 9 35,267,881 35,275,957 RGD:2290270
G Tsr3 TSR3 20S rRNA accumulation JBrowse link 17 25,240,141 25,242,799 RGD:2290270
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eri1 exoribonuclease 1 JBrowse link 8 35,465,265 35,495,533 RGD:2290270
G Eri2 exoribonuclease 2 JBrowse link 7 119,783,826 119,794,058 RGD:2290270
G Eri3 exoribonuclease 3 JBrowse link 4 117,550,241 117,674,297 RGD:2290270
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Exosc2 exosome component 2 JBrowse link 2 31,670,715 31,681,352 RGD:2290270
G Exosc3 exosome component 3 JBrowse link 4 45,316,613 45,320,616 RGD:2290270
G Exosc7 exosome component 7 JBrowse link 9 123,113,231 123,136,129 RGD:2290270
G Exosc8 exosome component 8 JBrowse link 3 54,728,679 54,735,364 RGD:2290270
G Exosc9 exosome component 9 JBrowse link 3 36,552,606 36,565,727 RGD:2290270
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf19 pre-mRNA processing factor 19 JBrowse link 19 10,895,231 10,909,559 RGD:2290270
G Xab2 XPA binding protein 2 JBrowse link 8 3,610,087 3,621,334 RGD:2290270
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isy1 ISY1 splicing factor homolog JBrowse link 6 87,818,447 87,838,923 RGD:2290270
G Prpf18 pre-mRNA processing factor 18 JBrowse link 2 4,622,058 4,652,135 RGD:2290270
maturation of 5.8S rRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1d C1D nuclear receptor co-repressor JBrowse link 11 17,257,547 17,269,176 RGD:2290270
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 2 155,819,837 155,826,925 RGD:2290270
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Exosc4 exosome component 4 JBrowse link 15 76,327,397 76,330,670 RGD:2290270
G Las1l LAS1-like (S. cerevisiae) JBrowse link X 95,920,045 95,956,974 RGD:2290270
G Mak16 MAK16 homolog JBrowse link 8 31,159,468 31,168,724 RGD:2290270
G Mphosph6 M phase phosphoprotein 6 JBrowse link 8 117,791,637 117,801,974 RGD:2290270
G Mtrex Mtr4 exosome RNA helicase JBrowse link 13 112,867,780 112,927,380 RGD:2290270
G Nol9 nucleolar protein 9 JBrowse link 4 152,039,261 152,061,494 RGD:2290270
G Nsa2 NSA2 ribosome biogenesis homolog JBrowse link 13 97,129,427 97,137,926 RGD:2290270
G Prkdc protein kinase, DNA activated, catalytic polypeptide JBrowse link 16 15,637,444 15,842,239 RGD:2290270
G Rpf1 ribosome production factor 1 homolog JBrowse link 3 146,506,344 146,521,423 RGD:2290270
G Rrp15 ribosomal RNA processing 15 homolog (S. cerevisiae) JBrowse link 1 186,721,086 186,749,358 RGD:2290270
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) JBrowse link 11 106,249,138 106,256,084 RGD:2290270
G Pes1 pescadillo ribosomal biogenesis factor 1 JBrowse link 11 3,963,975 3,980,004 RGD:2290270
G Urb1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) JBrowse link 16 90,751,527 90,810,467 RGD:2290270
G Wdr12 WD repeat domain 12 JBrowse link 1 60,071,361 60,098,500 RGD:2290270
maturation of 5S rRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 JBrowse link 19 5,377,523 5,388,703 RGD:2290270
maturation of LSU-rRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 2 155,819,837 155,826,925 RGD:2290270
G Gm14214 predicted gene 14214 JBrowse link 2 154,769,213 154,770,049 RGD:2290270
G Las1l LAS1-like (S. cerevisiae) JBrowse link X 95,920,045 95,956,974 RGD:2290270
G Mak16 MAK16 homolog JBrowse link 8 31,159,468 31,168,724 RGD:2290270
G Mrpl1 mitochondrial ribosomal protein L1 JBrowse link 5 96,209,498 96,266,727 RGD:2290270
G Nhp2 NHP2 ribonucleoprotein JBrowse link 11 51,619,773 51,623,718 RGD:2290270
G Nop2 NOP2 nucleolar protein JBrowse link 6 125,131,883 125,144,753 RGD:2290270
G Nsa2 NSA2 ribosome biogenesis homolog JBrowse link 13 97,129,427 97,137,926 RGD:2290270
G Rpf1 ribosome production factor 1 homolog JBrowse link 3 146,506,344 146,521,423 RGD:2290270
G Rpf2 ribosome production factor 2 homolog JBrowse link 10 40,223,246 40,247,039 RGD:2290270
G Rpl10a ribosomal protein L10A JBrowse link 17 28,328,471 28,331,033 RGD:2290270
G Rpl7a ribosomal protein L7A JBrowse link 2 26,910,685 26,913,312 RGD:2290270
G Rrp15 ribosomal RNA processing 15 homolog (S. cerevisiae) JBrowse link 1 186,721,086 186,749,358 RGD:2290270
G Rsl1d1 ribosomal L1 domain containing 1 JBrowse link 16 11,193,037 11,203,292 RGD:2290270
G Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) JBrowse link 15 82,041,345 82,047,598 RGD:2290270
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bop1 block of proliferation 1 JBrowse link 15 76,452,988 76,477,249 RGD:2290270
G Ddx18 DEAD box helicase 18 JBrowse link 1 121,553,835 121,567,980 RGD:2290270
G Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) JBrowse link 11 106,249,138 106,256,084 RGD:2290270
G Gtpbp4 GTP binding protein 4 JBrowse link 13 8,972,070 8,996,116 RGD:2290270
G Nifk nucleolar protein interacting with the FHA domain of MKI67 JBrowse link 1 118,321,843 118,333,831 RGD:2290270
G Pes1 pescadillo ribosomal biogenesis factor 1 JBrowse link 11 3,963,975 3,980,004 RGD:2290270
G Rpf2 ribosome production factor 2 homolog JBrowse link 10 40,223,246 40,247,039 RGD:2290270
G Rpl35 ribosomal protein L35 JBrowse link 2 39,001,581 39,005,131 RGD:2290270
G Rpl7 ribosomal protein L7 JBrowse link 1 16,101,295 16,104,433 RGD:2290270
G Rpl7l1 ribosomal protein L7-like 1 JBrowse link 17 46,773,907 46,782,656 RGD:2290270
G Urb1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) JBrowse link 16 90,751,527 90,810,467 RGD:2290270
G Wdr12 WD repeat domain 12 JBrowse link 1 60,071,361 60,098,500 RGD:2290270
G Znhit3 zinc finger, HIT type 3 JBrowse link 11 84,910,950 84,916,366 RGD:2290270
G Znhit6 zinc finger, HIT type 6 JBrowse link 3 145,576,201 145,605,245 RGD:2290270
maturation of SSU-rRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx52 DExD box helicase 52 JBrowse link 11 83,942,090 83,963,088 RGD:2290270
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 78,804,868 78,821,152 RGD:2290270
G Nob1 NIN1/RPN12 binding protein 1 homolog JBrowse link 8 107,412,489 107,425,038 RGD:2290270
G Nol11 nucleolar protein 11 JBrowse link 11 107,166,651 107,189,381 RGD:2290270
G Nop14 NOP14 nucleolar protein JBrowse link 5 34,638,536 34,660,148 RGD:2290270
G Riok1 RIO kinase 1 JBrowse link 13 38,036,989 38,061,433 RGD:2290270
G Riok2 RIO kinase 2 JBrowse link 17 17,374,332 17,394,899 RGD:2290270
G Riok3 RIO kinase 3 JBrowse link 18 12,126,091 12,157,367 RGD:2290270
G Rps19 ribosomal protein S19 JBrowse link 7 24,884,592 24,889,811 RGD:2290270
G Rps28 ribosomal protein S28 JBrowse link 17 33,823,036 33,824,562 RGD:2290270
G Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) JBrowse link 15 82,041,345 82,047,598 RGD:2290270
G Srfbp1 serum response factor binding protein 1 JBrowse link 18 52,465,631 52,491,933 RGD:2290270
G Tsr3 TSR3 20S rRNA accumulation JBrowse link 17 25,240,141 25,242,799 RGD:2290270
G Utp4 UTP4 small subunit processome component JBrowse link 8 106,893,640 106,923,094 RGD:2290270
G Wdr3 WD repeat domain 3 JBrowse link 3 100,138,180 100,162,407 RGD:2290270
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bms1 BMS1, ribosome biogenesis factor JBrowse link 6 118,383,381 118,419,802 RGD:2290270
G Bysl bystin-like JBrowse link 17 47,599,331 47,611,492 RGD:2290270
G Dcaf13 DDB1 and CUL4 associated factor 13 JBrowse link 15 39,112,874 39,146,856 RGD:2290270
G Dhx37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 JBrowse link 5 125,413,747 125,434,139 RGD:2290270
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 JBrowse link 7 19,382,017 19,395,694 RGD:2290270
G Fam207a family with sequence similarity 207, member A JBrowse link 10 77,486,655 77,516,924 RGD:2290270
G Gtf2h5 general transcription factor IIH, polypeptide 5 JBrowse link 17 6,079,828 6,085,488 RGD:2290270
G Heatr1 HEAT repeat containing 1 JBrowse link 13 12,395,375 12,438,893 RGD:2290270
G Helb helicase (DNA) B JBrowse link 10 120,083,608 120,113,010 RGD:2290270
G Mrps11 mitochondrial ribosomal protein S11 JBrowse link 7 78,783,131 78,792,988 RGD:2290270
G Ngdn neuroguidin, EIF4E binding protein JBrowse link 14 55,015,454 55,024,138 RGD:2290270
G Nol10 nucleolar protein 10 JBrowse link 12 17,348,421 17,430,095 RGD:2290270
G Pwp2 PWP2 periodic tryptophan protein homolog (yeast) JBrowse link 10 78,170,909 78,185,171 RGD:2290270
G Rps14 ribosomal protein S14 JBrowse link 18 60,774,596 60,778,546 RGD:2290270
G Rps16 ribosomal protein S16 JBrowse link 7 28,350,689 28,352,698 RGD:2290270
G Rps19 ribosomal protein S19 JBrowse link 7 24,884,592 24,889,811 RGD:2290270
G Rps8 ribosomal protein S8 JBrowse link 4 117,153,836 117,156,132 RGD:2290270
G Rrp36 ribosomal RNA processing 36 JBrowse link 17 46,666,323 46,674,326 RGD:2290270
G Tsr1 TSR1 20S rRNA accumulation JBrowse link 11 74,898,080 74,909,340 RGD:2290270
G Tsr2 TSR2 20S rRNA accumulation JBrowse link X 151,087,094 151,096,543 RGD:2290270
G Utp25 UTP25 small subunit processome component JBrowse link 1 193,104,399 193,130,283 RGD:2290270
G Utp3 UTP3 small subunit processome component JBrowse link 5 88,554,462 88,556,090 RGD:2290270
G Utp4 UTP4 small subunit processome component JBrowse link 8 106,893,640 106,923,094 RGD:2290270
G Utp6 UTP6 small subunit processome component JBrowse link 11 79,933,956 79,962,387 RGD:2290270
G Wdr46 WD repeat domain 46 JBrowse link 17 33,940,634 33,949,695 RGD:2290270
mitochondrial mRNA polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
mitochondrial mRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbrg4 transforming growth factor beta regulated gene 4 JBrowse link 11 6,615,598 6,626,084 RGD:2290270
mitochondrial RNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) JBrowse link 10 62,429,221 62,451,515 RGD:2290270
mitochondrial RNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 16 56,033,720 56,037,786 RGD:2290270
mitochondrial RNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fastkd5 FAST kinase domains 5 JBrowse link 2 130,613,846 130,630,002 RGD:2290270
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
mitochondrial tRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 JBrowse link X 152,001,896 152,004,442 RGD:2290270
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 16 56,033,720 56,037,786 RGD:2290270
G Trnt1 tRNA nucleotidyl transferase, CCA-adding, 1 JBrowse link 6 106,769,138 106,782,474 RGD:2290270
mitochondrial tRNA 3'-trailer cleavage, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elac2 elaC ribonuclease Z 2 JBrowse link 11 64,979,030 65,002,080 RGD:2290270
mitochondrial tRNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 JBrowse link X 152,001,896 152,004,442 RGD:2290270
G Prorp protein only RNase P catalytic subunit JBrowse link 12 55,302,637 55,382,492 RGD:2290270
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 16 56,033,720 56,037,786 RGD:2290270
mitochondrial tRNA methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 JBrowse link X 152,001,896 152,004,442 RGD:2290270
G Trmt5 TRM5 tRNA methyltransferase 5 JBrowse link 12 73,268,515 73,286,975 RGD:2290270
mitochondrial tRNA modification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 JBrowse link 2 154,222,011 154,373,038 RGD:2290270
mitochondrial tRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trmt10a tRNA methyltransferase 10A JBrowse link 3 138,143,448 138,159,821 RGD:2290270
G Trmt10b tRNA methyltransferase 10B JBrowse link 4 45,297,068 45,316,134 RGD:2290270
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 16 56,033,720 56,037,786 RGD:2290270
mitochondrial tRNA wobble uridine modification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mto1 mitochondrial tRNA translation optimization 1 JBrowse link 9 78,443,479 78,474,165 RGD:2290270
mRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clp1 CLP1, cleavage and polyadenylation factor I subunit JBrowse link 2 84,723,122 84,727,287 RGD:2290270
G Cstf2 cleavage stimulation factor, 3' pre-RNA subunit 2 JBrowse link X 134,059,176 134,086,822 RGD:2290270
G Cstf2t cleavage stimulation factor, 3' pre-RNA subunit 2, tau JBrowse link 19 31,082,841 31,086,592 RGD:2290270
G Rprd1a regulation of nuclear pre-mRNA domain containing 1A JBrowse link 18 24,484,960 24,530,235 RGD:2290270
G Rprd1b regulation of nuclear pre-mRNA domain containing 1B JBrowse link 2 158,028,475 158,078,207 RGD:2290270
G Rprd2 regulation of nuclear pre-mRNA domain containing 2 JBrowse link 3 95,759,871 95,819,744 RGD:2290270
G Zc3h3 zinc finger CCCH type containing 3 JBrowse link 15 75,754,430 75,842,061 RGD:2290270
mRNA 3'-end processing by stem-loop binding and cleavage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cpsf2 cleavage and polyadenylation specific factor 2 JBrowse link 12 101,975,759 102,005,993 RGD:2290270
G Cpsf3 cleavage and polyadenylation specificity factor 3 JBrowse link 12 21,286,273 21,315,056 RGD:2290270
G Lsm11 U7 snRNP-specific Sm-like protein LSM11 JBrowse link 11 45,928,266 45,944,996 RGD:2290270
G Slbp stem-loop binding protein JBrowse link 5 33,640,055 33,652,574 RGD:2290270
G Zfp473 zinc finger protein 473 JBrowse link 7 44,731,480 44,748,617 RGD:2290270
mRNA 3'-splice site recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isy1 ISY1 splicing factor homolog JBrowse link 6 87,818,447 87,838,923 RGD:2290270
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) JBrowse link 11 43,433,726 43,447,982 RGD:2290270
mRNA 5'-splice site recognition term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf39 pre-mRNA processing factor 39 JBrowse link 12 65,036,334 65,063,386 RGD:2290270
G Psip1 PC4 and SFRS1 interacting protein 1 JBrowse link 4 83,455,680 83,486,463 RGD:2290270
G Sfswap splicing factor SWAP JBrowse link 5 129,501,231 129,571,384 RGD:2290270
G Snrpc U1 small nuclear ribonucleoprotein C JBrowse link 17 27,840,028 27,851,968 RGD:2290270
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:2290270
G Srsf12 serine and arginine-rich splicing factor 12 JBrowse link 4 33,208,991 33,233,343 RGD:9068941
mRNA alternative polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 10 117,344,667 117,376,998 RGD:2290270
G Cpsf7 cleavage and polyadenylation specific factor 7 JBrowse link 19 10,525,223 10,547,735 RGD:2290270
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 JBrowse link 8 94,019,403 94,037,039 RGD:2290270
G Virma vir like m6A methyltransferase associated JBrowse link 4 11,485,958 11,551,143 RGD:2290270
mRNA cis splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 4930595M18Rik RIKEN cDNA 4930595M18 gene JBrowse link X 81,419,575 81,458,122 RGD:2290270
G Cactin cactin, spliceosome C complex subunit JBrowse link 10 81,321,103 81,326,251 RGD:2290270
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 9 14,500,604 14,510,620 RGD:2290270
G Dcps decapping enzyme, scavenger JBrowse link 9 35,124,414 35,175,987 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncbp2 nuclear cap binding protein subunit 2 JBrowse link 16 31,948,546 31,958,472 RGD:2290270
G Prpf40a pre-mRNA processing factor 40A JBrowse link 2 53,134,702 53,191,438 RGD:2290270
G Prpf40b pre-mRNA processing factor 40B JBrowse link 15 99,295,076 99,317,018 RGD:2290270
G Rbm19 RNA binding motif protein 19 JBrowse link 5 120,116,513 120,198,971 RGD:2290270
G Rbm22 RNA binding motif protein 22 JBrowse link 18 60,560,786 60,572,729 RGD:2290270
G Rbm4 RNA binding motif protein 4 JBrowse link 19 4,784,293 4,794,009 RGD:2290270
G Rbm4b RNA binding motif protein 4B JBrowse link 19 4,756,452 4,765,946 RGD:2290270
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 JBrowse link 19 5,377,523 5,388,703 RGD:2290270
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:2290270
G Srsf10 serine and arginine-rich splicing factor 10 JBrowse link 4 135,855,752 135,869,908 RGD:2290270
G Srsf12 serine and arginine-rich splicing factor 12 JBrowse link 4 33,208,991 33,233,343 RGD:2290270
G Srsf2 serine and arginine-rich splicing factor 2 JBrowse link 11 116,849,897 116,853,675 RGD:2290270
G Srsf3 serine and arginine-rich splicing factor 3 JBrowse link 17 29,032,660 29,043,372 RGD:2290270
G Srsf4 serine and arginine-rich splicing factor 4 JBrowse link 4 131,873,530 131,901,725 RGD:2290270
G Srsf5 serine and arginine-rich splicing factor 5 JBrowse link 12 80,945,495 80,950,507 RGD:2290270
G Srsf6 serine and arginine-rich splicing factor 6 JBrowse link 2 162,931,508 162,937,121 RGD:2290270
G Srsf7 serine and arginine-rich splicing factor 7 JBrowse link 17 80,200,080 80,207,369 RGD:2290270
G Srsf9 serine and arginine-rich splicing factor 9 JBrowse link 5 115,327,163 115,333,843 RGD:2290270
G Wbp11 WW domain binding protein 11 JBrowse link 6 136,813,654 136,828,216 RGD:2290270
G Wbp4 WW domain binding protein 4 JBrowse link 14 79,459,937 79,481,268 RGD:2290270
mRNA cleavage involved in mRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ern1 endoplasmic reticulum (ER) to nucleus signalling 1 JBrowse link 11 106,397,620 106,487,796 RGD:2290270
mRNA polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahcyl1 S-adenosylhomocysteine hydrolase-like 1 JBrowse link 3 107,663,120 107,696,560 RGD:2290270
G Aplp1 amyloid beta (A4) precursor-like protein 1 JBrowse link 7 30,434,980 30,445,582 RGD:2290270
G App amyloid beta (A4) precursor protein JBrowse link 16 84,952,666 85,175,255 RGD:2290270
G Cdc73 cell division cycle 73, Paf1/RNA polymerase II complex component JBrowse link 1 143,603,276 143,702,893 RGD:2290270
G Clp1 CLP1, cleavage and polyadenylation factor I subunit JBrowse link 2 84,723,122 84,727,287 RGD:2290270
G Cpsf1 cleavage and polyadenylation specific factor 1 JBrowse link 15 76,595,808 76,607,661 RGD:2290270
G Cpsf2 cleavage and polyadenylation specific factor 2 JBrowse link 12 101,975,759 102,005,993 RGD:2290270
G Cpsf3 cleavage and polyadenylation specificity factor 3 JBrowse link 12 21,286,273 21,315,056 RGD:2290270
G Cstf2 cleavage stimulation factor, 3' pre-RNA subunit 2 JBrowse link X 134,059,176 134,086,822 RGD:2290270
G Cstf2t cleavage stimulation factor, 3' pre-RNA subunit 2, tau JBrowse link 19 31,082,841 31,086,592 RGD:2290270
G Fip1l1 FIP1 like 1 (S. cerevisiae) JBrowse link 5 74,535,438 74,598,790 RGD:2290270
G Leo1 Leo1, Paf1/RNA polymerase II complex component JBrowse link 9 75,441,015 75,466,432 RGD:2290270
G Mtpap mitochondrial poly(A) polymerase JBrowse link 18 4,375,589 4,399,888 RGD:2290270
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 JBrowse link 8 94,019,403 94,037,039 RGD:2290270
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like JBrowse link 2 164,024,770 164,050,538 RGD:2290270
G Pabpc2 poly(A) binding protein, cytoplasmic 2 JBrowse link 18 39,773,497 39,776,082 RGD:2290270
G Pabpn1 poly(A) binding protein, nuclear 1 JBrowse link 14 54,894,143 54,898,927 RGD:2290270
G Paf1 Paf1, RNA polymerase II complex component JBrowse link 7 28,392,996 28,399,383 RGD:2290270
G Papola poly (A) polymerase alpha JBrowse link 12 105,784,677 105,838,949 RGD:2290270
G Papolb poly (A) polymerase beta (testis specific) JBrowse link 5 142,527,740 142,530,076 RGD:2290270
G Papolg poly(A) polymerase gamma JBrowse link 11 23,860,145 23,895,293 RGD:2290270
G Pcf11 PCF11 cleavage and polyadenylation factor subunit JBrowse link 7 92,643,458 92,670,080 RGD:2290270
G Scaf8 SR-related CTD-associated factor 8 JBrowse link 17 3,114,972 3,198,859 RGD:2290270
G Ssu72 Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) JBrowse link 4 155,704,815 155,733,879 RGD:2290270
G Sympk symplekin JBrowse link 7 19,024,377 19,054,623 RGD:2290270
G Tent2 terminal nucleotidyltransferase 2 JBrowse link 13 93,145,855 93,192,435 RGD:2290270
G Tent4b terminal nucleotidyltransferase 4B JBrowse link 8 88,199,213 88,263,314 RGD:2290270
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link 19 8,953,832 8,966,210 RGD:2290270
G Tut4 terminal uridylyl transferase 4 JBrowse link 4 108,459,410 108,559,415 RGD:2290270
G Tut7 terminal uridylyl transferase 7 JBrowse link 13 59,771,876 59,823,169 RGD:2290270
G Wdr33 WD repeat domain 33 JBrowse link 18 31,804,057 31,908,987 RGD:2290270
mRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A1cf APOBEC1 complementation factor JBrowse link 19 31,868,756 31,952,365 RGD:2290270
G Aar2 AAR2 splicing factor homolog JBrowse link 2 156,547,560 156,568,972 RGD:2290270
G Acin1 apoptotic chromatin condensation inducer 1 JBrowse link 14 54,642,161 54,686,965 RGD:2290270
G Adar adenosine deaminase, RNA-specific JBrowse link 3 89,714,469 89,753,455 RGD:2290270
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 10 77,290,727 77,418,292 RGD:2290270
G Adarb2 adenosine deaminase, RNA-specific, B2 JBrowse link 13 8,202,526 8,768,762 RGD:2290270
G Aff2 AF4/FMR2 family, member 2 JBrowse link X 69,360,190 69,872,054 RGD:2290270
G Aicda activation-induced cytidine deaminase JBrowse link 6 122,553,809 122,564,180 RGD:2290270
G Akap17b A kinase (PRKA) anchor protein 17B JBrowse link X 36,608,173 36,645,465 RGD:2290270
G Akap8l A kinase (PRKA) anchor protein 8-like JBrowse link 17 32,321,424 32,350,616 RGD:2290270
G Alkbh5 alkB homolog 5, RNA demethylase JBrowse link 11 60,537,683 60,558,512 RGD:2290270
G Alyref Aly/REF export factor JBrowse link 11 120,594,504 120,598,399 RGD:2290270
G Alyref2 Aly/REF export factor 2 JBrowse link 1 171,503,478 171,504,750 RGD:2290270
G Apobec1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 JBrowse link 6 122,577,792 122,603,024 RGD:2290270
G Apobec2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 JBrowse link 17 48,419,231 48,432,728 RGD:2290270
G Apobec4 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) JBrowse link 1 152,750,551 152,757,544 RGD:2290270
G Aqr aquarius JBrowse link 2 114,101,161 114,175,339 RGD:2290270
G Arl6ip4 ADP-ribosylation factor-like 6 interacting protein 4 JBrowse link 5 124,116,108 124,118,195 RGD:2290270
G Aurkaip1 aurora kinase A interacting protein 1 JBrowse link 4 155,831,269 155,833,098 RGD:2290270
G Bcas2 breast carcinoma amplified sequence 2 JBrowse link 3 103,171,655 103,179,163 RGD:2290270
G Brdt bromodomain, testis-specific JBrowse link 5 107,331,116 107,387,061 RGD:2290270
G Bud13 BUD13 homolog JBrowse link 9 46,282,976 46,298,783 RGD:2290270
G Bud31 BUD31 homolog JBrowse link 5 145,140,376 145,148,078 RGD:2290270
G C1qbp complement component 1, q subcomponent binding protein JBrowse link 11 70,977,846 70,983,026 RGD:2290270
G Cactin cactin, spliceosome C complex subunit JBrowse link 10 81,321,103 81,326,251 RGD:2290270
G Casc3 cancer susceptibility candidate 3 JBrowse link 11 98,809,808 98,833,807 RGD:2290270
G Ccar2 cell cycle activator and apoptosis regulator 2 JBrowse link 14 70,138,168 70,153,791 RGD:2290270
G Cd2bp2 CD2 cytoplasmic tail binding protein 2 JBrowse link 7 127,191,660 127,196,077 RGD:2290270
G Cdc40 cell division cycle 40 JBrowse link 10 40,831,621 40,883,143 RGD:2290270
G Cdc5l cell division cycle 5-like (S. pombe) JBrowse link 17 45,391,887 45,433,707 RGD:2290270
G Cdk12 cyclin-dependent kinase 12 JBrowse link 11 98,202,433 98,281,101 RGD:2290270
G Cdk13 cyclin-dependent kinase 13 JBrowse link 13 17,711,676 17,805,212 RGD:2290270
G Celf1 CUGBP, Elav-like family member 1 JBrowse link 2 90,940,259 91,019,497 RGD:2290270
G Celf2 CUGBP, Elav-like family member 2 JBrowse link 2 6,539,694 7,396,341 RGD:2290270
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 3 94,478,285 94,496,786 RGD:2290270
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 25,477,620 25,754,520 RGD:2290270
G Celf6 CUGBP, Elav-like family member 6 JBrowse link 9 59,578,287 59,609,033 RGD:2290270
G Cir1 corepressor interacting with RBPJ, 1 JBrowse link 2 73,283,872 73,312,592 RGD:2290270
G Clasrp CLK4-associating serine/arginine rich protein JBrowse link 7 19,581,038 19,604,517 RGD:2290270
G Clp1 CLP1, cleavage and polyadenylation factor I subunit JBrowse link 2 84,723,122 84,727,287 RGD:2290270
G Cmtr1 cap methyltransferase 1 JBrowse link 17 29,660,595 29,705,979 RGD:2290270
G Cmtr2 cap methyltransferase 2 JBrowse link 8 110,215,346 110,224,489 RGD:2290270
G Cnot6l CCR4-NOT transcription complex, subunit 6-like JBrowse link 5 96,070,333 96,164,198 RGD:2290270
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 7 81,347,026 81,458,001 RGD:2290270
G Cpsf1 cleavage and polyadenylation specific factor 1 JBrowse link 15 76,595,808 76,607,661 RGD:2290270
G Cpsf2 cleavage and polyadenylation specific factor 2 JBrowse link 12 101,975,759 102,005,993 RGD:2290270
G Cpsf3 cleavage and polyadenylation specificity factor 3 JBrowse link 12 21,286,273 21,315,056 RGD:2290270
G Cpsf4 cleavage and polyadenylation specific factor 4 JBrowse link 5 145,167,213 145,182,041 RGD:2290270
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 10 117,344,667 117,376,998 RGD:2290270
G Cpsf7 cleavage and polyadenylation specific factor 7 JBrowse link 19 10,525,223 10,547,735 RGD:2290270
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 2 145,917,482 145,934,700 RGD:2290270
G Csdc2 cold shock domain containing C2, RNA binding JBrowse link 15 81,936,759 81,950,941 RGD:2290270
G Cstf1 cleavage stimulation factor, 3' pre-RNA, subunit 1 JBrowse link 2 172,370,645 172,382,449 RGD:2290270
G Cstf2 cleavage stimulation factor, 3' pre-RNA subunit 2 JBrowse link X 134,059,176 134,086,822 RGD:2290270
G Cstf2t cleavage stimulation factor, 3' pre-RNA subunit 2, tau JBrowse link 19 31,082,841 31,086,592 RGD:2290270
G Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 JBrowse link 2 104,590,484 104,665,425 RGD:2290270
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 9 14,500,604 14,510,620 RGD:2290270
G Cwc22 CWC22 spliceosome-associated protein JBrowse link 2 77,881,159 77,946,356 RGD:2290270
G Cwc25 CWC25 spliceosome-associated protein JBrowse link 11 97,745,470 97,766,613 RGD:2290270
G Dbr1 debranching RNA lariats 1 JBrowse link 9 99,575,786 99,585,007 RGD:2290270
G Dcps decapping enzyme, scavenger JBrowse link 9 35,124,414 35,175,987 RGD:2290270
G Ddx1 DEAD box helicase 1 JBrowse link 12 13,219,307 13,249,174 RGD:2290270
G Ddx17 DEAD box helicase 17 JBrowse link 15 79,527,696 79,546,764 RGD:2290270
G Ddx20 DEAD box helicase 20 JBrowse link 3 105,678,270 105,687,788 RGD:2290270
G Ddx39a DEAD box helicase 39a JBrowse link 8 83,715,177 83,726,904 RGD:2290270
G Ddx39b DEAD box helicase 39b JBrowse link 17 35,241,746 35,253,707 RGD:2290270
G Ddx41 DEAD box helicase 41 JBrowse link 13 55,530,410 55,536,658 RGD:2290270
G Ddx46 DEAD box helicase 46 JBrowse link 13 55,634,975 55,681,267 RGD:2290270
G Ddx47 DEAD box helicase 47 JBrowse link 6 135,011,612 135,023,776 RGD:2290270
G Ddx5 DEAD box helicase 5 JBrowse link 11 106,780,355 106,789,185 RGD:2290270
G Dhx15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 JBrowse link 5 52,150,203 52,190,546 RGD:2290270
G Dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 JBrowse link 11 101,732,956 101,767,358 RGD:2290270
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 JBrowse link 1 153,455,756 153,487,688 RGD:2290270
G Ecd ecdysoneless cell cycle regulator JBrowse link 14 20,319,859 20,348,121 RGD:2290270
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link 11 102,838,472 102,880,984 RGD:2290270
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 4 110,203,737 110,351,939 RGD:2290270
G Ern1 endoplasmic reticulum (ER) to nucleus signalling 1 JBrowse link 11 106,397,620 106,487,796 RGD:2290270
G Ern2 endoplasmic reticulum (ER) to nucleus signalling 2 JBrowse link 7 122,169,893 122,186,239 RGD:2290270
G Esrp1 epithelial splicing regulatory protein 1 JBrowse link 4 11,331,933 11,386,783 RGD:2290270
G Esrp2 epithelial splicing regulatory protein 2 JBrowse link 8 106,130,319 106,137,193 RGD:2290270
G Ess2 ess-2 splicing factor JBrowse link 16 17,900,709 17,911,348 RGD:2290270
G Fam172a family with sequence similarity 172, member A JBrowse link 13 77,708,677 78,166,240 RGD:2290270
G Fastkd5 FAST kinase domains 5 JBrowse link 2 130,613,846 130,630,002 RGD:2290270
G Fip1l1 FIP1 like 1 (S. cerevisiae) JBrowse link 5 74,535,438 74,598,790 RGD:2290270
G Fmr1 FMRP translational regulator 1 JBrowse link X 68,678,536 68,717,963 RGD:2290270
G Frg1 FSHD region gene 1 JBrowse link 8 41,389,181 41,417,138 RGD:2290270
G Gcfc2 GC-rich sequence DNA binding factor 2 JBrowse link 6 81,910,562 81,959,098 RGD:2290270
G Gemin2 gem nuclear organelle associated protein 2 JBrowse link 12 59,013,391 59,028,470 RGD:2290270
G Gemin5 gem nuclear organelle associated protein 5 JBrowse link 11 58,120,001 58,168,554 RGD:2290270
G Gemin6 gem nuclear organelle associated protein 6 JBrowse link 17 80,207,504 80,228,497 RGD:2290270
G Gemin7 gem nuclear organelle associated protein 7 JBrowse link 7 19,564,949 19,573,343 RGD:2290270
G Gemin8 gem nuclear organelle associated protein 8 JBrowse link X 166,170,454 166,190,512 RGD:2290270
G Gpatch1 G patch domain containing 1 JBrowse link 7 35,238,912 35,318,748 RGD:2290270
G Gpkow G patch domain and KOW motifs JBrowse link X 7,697,134 7,710,261 RGD:2290270
G Grsf1 G-rich RNA sequence binding factor 1 JBrowse link 5 88,659,233 88,676,171 RGD:2290270
G H2ab1 H2A.B variant histone 1 JBrowse link X 117,014,757 117,015,104 RGD:9068941
G H2ab2 H2A.B variant histone 2 JBrowse link X 116,681,178 116,681,525 RGD:9068941
G H2ab3 H2A.B variant histone 3 JBrowse link X 120,312,582 120,313,226 RGD:9068941
G Habp4 hyaluronic acid binding protein 4 JBrowse link 13 64,161,866 64,186,537 RGD:2290270
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 15 103,239,943 103,246,698 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 JBrowse link 2 75,659,105 75,669,407 RGD:2290270
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 14 52,073,377 52,104,039 RGD:2290270
G Hnrnpf heterogeneous nuclear ribonucleoprotein F JBrowse link 6 117,900,340 117,925,622 RGD:2290270
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 JBrowse link 11 50,375,257 50,386,528 RGD:2290270
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 13 58,391,132 58,403,343 RGD:2290270
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 7 28,808,546 28,822,268 RGD:2290270
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like JBrowse link 17 80,029,487 80,062,268 RGD:2290270
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 17 33,646,233 33,685,458 RGD:2290270
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 1 178,321,108 178,338,891 RGD:2290270
G Hsf1 heat shock factor 1 JBrowse link 15 76,477,362 76,501,155 RGD:2290270
G Hspa8 heat shock protein 8 JBrowse link 9 40,801,276 40,805,202 RGD:2290270
G Ik IK cytokine JBrowse link 18 36,744,656 36,757,639 RGD:2290270
G Isy1 ISY1 splicing factor homolog JBrowse link 6 87,818,447 87,838,923 RGD:2290270
G Iws1 IWS1, SUPT6 interacting protein JBrowse link 18 32,067,326 32,104,331 RGD:2290270
G Jmjd6 jumonji domain containing 6 JBrowse link 11 116,837,432 116,843,767 RGD:2290270
G Khdc4 KH domain containing 4, pre-mRNA splicing factor JBrowse link 3 88,685,428 88,712,933 RGD:2290270
G Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 JBrowse link 4 129,702,380 129,743,878 RGD:2290270
G Khdrbs2 KH domain containing, RNA binding, signal transduction associated 2 JBrowse link 1 32,172,602 32,705,224 RGD:2290270
G Khdrbs3 KH domain containing, RNA binding, signal transduction associated 3 JBrowse link 15 68,928,392 69,101,794 RGD:2290270
G Khsrp KH-type splicing regulatory protein JBrowse link 17 57,021,049 57,031,507 RGD:2290270
G Kin Kin17 DNA and RNA binding protein JBrowse link 2 10,080,551 10,092,701 RGD:2290270
G Larp7 La ribonucleoprotein domain family, member 7 JBrowse link 3 127,536,714 127,553,349 RGD:2290270
G Lgals3 lectin, galactose binding, soluble 3 JBrowse link 14 47,373,860 47,386,167 RGD:2290270
G Lsm1 LSM1 homolog, mRNA degradation associated JBrowse link 8 25,785,318 25,803,975 RGD:2290270
G Lsm10 U7 snRNP-specific Sm-like protein LSM10 JBrowse link 4 126,096,562 126,098,584 RGD:2290270
G Lsm11 U7 snRNP-specific Sm-like protein LSM11 JBrowse link 11 45,928,266 45,944,996 RGD:2290270
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 17 34,981,854 34,985,891 RGD:2290270
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 6 91,516,035 91,522,620 RGD:2290270
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 70,673,231 70,678,752 RGD:2290270
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 6 56,701,063 56,704,699 RGD:2290270
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 78,804,868 78,821,152 RGD:2290270
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 10 80,852,825 80,855,209 RGD:2290270
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated JBrowse link 6 18,848,635 18,854,052 RGD:2290270
G Luc7l3 LUC7-like 3 (S. cerevisiae) JBrowse link 11 94,291,073 94,322,329 RGD:2290270
G Magoh mago homolog, exon junction complex core component JBrowse link 4 107,879,755 107,887,424 RGD:2290270
G Magohb mago homolog B, exon junction complex core component JBrowse link 6 131,284,389 131,293,244 RGD:2290270
G Mbnl1 muscleblind like splicing factor 1 JBrowse link 3 60,472,559 60,629,750 RGD:2290270
G Mbnl2 muscleblind like splicing factor 2 JBrowse link 14 120,275,652 120,431,698 RGD:2290270
G Mbnl3 muscleblind like splicing factor 3 JBrowse link X 51,113,494 51,205,990 RGD:2290270
G Mettl3 methyltransferase like 3 JBrowse link 14 52,294,841 52,308,741 RGD:2290270
G Mtpap mitochondrial poly(A) polymerase JBrowse link 18 4,375,589 4,399,888 RGD:2290270
G Mtrex Mtr4 exosome RNA helicase JBrowse link 13 112,867,780 112,927,380 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncbp2 nuclear cap binding protein subunit 2 JBrowse link 16 31,948,546 31,958,472 RGD:2290270
G Ncbp3 nuclear cap binding subunit 3 JBrowse link 11 73,047,867 73,083,579 RGD:2290270
G Nol3 nucleolar protein 3 (apoptosis repressor with CARD domain) JBrowse link 8 105,276,145 105,281,939 RGD:2290270
G Nono non-POU-domain-containing, octamer binding protein JBrowse link X 101,429,560 101,448,593 RGD:2290270
G Nsrp1 nuclear speckle regulatory protein 1 JBrowse link 11 77,044,292 77,078,437 RGD:2290270
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 JBrowse link 8 94,019,403 94,037,039 RGD:2290270
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 15 36,595,658 36,609,581 RGD:2290270
G Pabpn1 poly(A) binding protein, nuclear 1 JBrowse link 14 54,894,143 54,898,927 RGD:2290270
G Pan2 PAN2 poly(A) specific ribonuclease subunit JBrowse link 10 128,303,333 128,321,358 RGD:2290270
G Pan3 PAN3 poly(A) specific ribonuclease subunit JBrowse link 5 147,426,208 147,548,501 RGD:2290270
G Papola poly (A) polymerase alpha JBrowse link 12 105,784,677 105,838,949 RGD:2290270
G Papolb poly (A) polymerase beta (testis specific) JBrowse link 5 142,527,740 142,530,076 RGD:2290270
G Papolg poly(A) polymerase gamma JBrowse link 11 23,860,145 23,895,293 RGD:2290270
G Pcbp1 poly(rC) binding protein 1 JBrowse link 6 86,524,480 86,526,189 RGD:2290270
G Pdcd11 programmed cell death 11 JBrowse link 19 47,090,735 47,131,146 RGD:2290270
G Pde12 phosphodiesterase 12 JBrowse link 14 26,664,117 26,669,846 RGD:2290270
G Phf5a PHD finger protein 5A JBrowse link 15 81,864,516 81,871,892 RGD:2290270
G Phrf1 PHD and ring finger domains 1 JBrowse link 7 141,228,477 141,262,751 RGD:2290270
G Plcb1 phospholipase C, beta 1 JBrowse link 2 134,786,164 135,475,258 RGD:2290270
G Plrg1 pleiotropic regulator 1 JBrowse link 3 83,055,538 83,072,291 RGD:2290270
G Pnn pinin JBrowse link 12 59,066,919 59,074,017 RGD:2290270
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 11 29,130,129 29,161,827 RGD:2290270
G Ppie peptidylprolyl isomerase E (cyclophilin E) JBrowse link 4 123,127,114 123,139,990 RGD:2290270
G Ppil1 peptidylprolyl isomerase (cyclophilin)-like 1 JBrowse link 17 29,250,835 29,263,971 RGD:2290270
G Ppil3 peptidylprolyl isomerase (cyclophilin)-like 3 JBrowse link 1 58,430,993 58,445,591 RGD:2290270
G Ppp1r8 protein phosphatase 1, regulatory subunit 8 JBrowse link 4 132,826,924 132,843,169 RGD:2290270
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 JBrowse link 6 100,833,620 100,869,934 RGD:2290270
G Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 JBrowse link 13 104,203,594 104,228,844 RGD:2290270
G Pqbp1 polyglutamine binding protein 1 JBrowse link X 7,894,519 7,899,269 RGD:2290270
G Prkaca protein kinase, cAMP dependent, catalytic, alpha JBrowse link 8 83,972,978 83,996,444 RGD:2290270
G Prkrip1 Prkr interacting protein 1 (IL11 inducible) JBrowse link 5 136,180,357 136,198,954 RGD:2290270
G Prmt9 protein arginine methyltransferase 9 JBrowse link 8 77,549,388 77,581,338 RGD:2290270
G Prpf18 pre-mRNA processing factor 18 JBrowse link 2 4,622,058 4,652,135 RGD:2290270
G Prpf19 pre-mRNA processing factor 19 JBrowse link 19 10,895,231 10,909,559 RGD:2290270
G Prpf3 pre-mRNA processing factor 3 JBrowse link 3 95,830,124 95,855,885 RGD:2290270
G Prpf31 pre-mRNA processing factor 31 JBrowse link 7 3,629,985 3,642,485 RGD:2290270
G Prpf38a PRP38 pre-mRNA processing factor 38 (yeast) domain containing A JBrowse link 4 108,564,867 108,579,336 RGD:2290270
G Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B JBrowse link 3 108,902,805 108,911,729 RGD:2290270
G Prpf39 pre-mRNA processing factor 39 JBrowse link 12 65,036,334 65,063,386 RGD:2290270
G Prpf4 pre-mRNA processing factor 4 JBrowse link 4 62,408,762 62,426,990 RGD:2290270
G Prpf40a pre-mRNA processing factor 40A JBrowse link 2 53,134,702 53,191,438 RGD:2290270
G Prpf40b pre-mRNA processing factor 40B JBrowse link 15 99,295,076 99,317,018 RGD:2290270
G Prpf4b pre-mRNA processing factor 4B JBrowse link 13 34,874,820 34,906,064 RGD:2290270
G Prpf6 pre-mRNA splicing factor 6 JBrowse link 2 181,601,319 181,655,661 RGD:2290270
G Prpf8 pre-mRNA processing factor 8 JBrowse link 11 75,486,777 75,509,447 RGD:2290270
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 10 79,854,432 79,864,435 RGD:2290270
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 3 119,718,741 119,784,647 RGD:2290270
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 4 59,471,868 59,549,378 RGD:2290270
G Ptcd2 pentatricopeptide repeat domain 2 JBrowse link 13 99,319,649 99,344,678 RGD:2290270
G Puf60 poly-U binding splicing factor 60 JBrowse link 15 76,070,182 76,082,537 RGD:2290270
G Qk quaking JBrowse link 17 10,206,471 10,319,361 RGD:2290270
G Raly hnRNP-associated with lethal yellow JBrowse link 2 154,790,920 154,871,010 RGD:2290270
G Ramac RNA guanine-7 methyltransferase activating subunit JBrowse link 7 81,762,953 81,769,490 RGD:2290270
G Rbbp6 retinoblastoma binding protein 6, ubiquitin ligase JBrowse link 7 122,969,637 123,002,572 RGD:2290270
G Rbfox1 RNA binding protein, fox-1 homolog (C. elegans) 1 JBrowse link 16 5,884,793 7,412,480 RGD:2290270
G Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 JBrowse link 15 77,078,990 77,308,434 RGD:2290270
G Rbfox3 RNA binding protein, fox-1 homolog (C. elegans) 3 JBrowse link 11 118,489,760 118,911,597 RGD:2290270
G Rbm11 RNA binding motif protein 11 JBrowse link 16 75,592,844 75,602,825 RGD:2290270
G Rbm15b RNA binding motif protein 15B JBrowse link 9 106,880,928 106,887,075 RGD:2290270
G Rbm17 RNA binding motif protein 17 JBrowse link 2 11,585,439 11,603,199 RGD:2290270
G Rbm20 RNA binding motif protein 20 JBrowse link 19 53,660,989 53,867,083 RGD:2290270
G Rbm22 RNA binding motif protein 22 JBrowse link 18 60,560,786 60,572,729 RGD:2290270
G Rbm24 RNA binding motif protein 24 JBrowse link 13 46,418,102 46,431,099 RGD:2290270
G Rbm25 RNA binding motif protein 25 JBrowse link 12 83,632,208 83,683,127 RGD:2290270
G Rbm26 RNA binding motif protein 26 JBrowse link 14 105,106,751 105,181,039 RGD:2290270
G Rbm27 RNA binding motif protein 27 JBrowse link 18 42,275,205 42,341,542 RGD:2290270
G Rbm28 RNA binding motif protein 28 JBrowse link 6 29,123,573 29,164,724 RGD:2290270
G Rbm38 RNA binding motif protein 38 JBrowse link 2 173,021,891 173,034,734 RGD:2290270
G Rbm39 RNA binding motif protein 39 JBrowse link 2 156,147,239 156,180,238 RGD:2290270
G Rbm4 RNA binding motif protein 4 JBrowse link 19 4,784,293 4,794,009 RGD:2290270
G Rbm4b RNA binding motif protein 4B JBrowse link 19 4,756,452 4,765,946 RGD:2290270
G Rbm5 RNA binding motif protein 5 JBrowse link 9 107,740,495 107,771,007 RGD:2290270
G Rbmx RNA binding motif protein, X chromosome JBrowse link X 57,383,348 57,393,046 RGD:2290270
G Rbmx2 RNA binding motif protein, X-linked 2 JBrowse link X 48,695,004 48,710,719 RGD:2290270
G Rbmxl1 RNA binding motif protein, X-linked like-1 JBrowse link 8 78,505,269 78,508,928 RGD:2290270
G Rnasel ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) JBrowse link 1 153,749,344 153,768,690 RGD:2290270
G Rngtt RNA guanylyltransferase and 5'-phosphatase JBrowse link 4 33,310,300 33,502,614 RGD:2290270
G Rnmt RNA (guanine-7-) methyltransferase JBrowse link 18 68,300,233 68,324,852 RGD:2290270
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 17 24,414,646 24,425,898 RGD:2290270
G Rpusd3 RNA pseudouridylate synthase domain containing 3 JBrowse link 6 113,415,319 113,419,348 RGD:2290270
G Rrp1b ribosomal RNA processing 1 homolog B (S. cerevisiae) JBrowse link 17 32,036,162 32,062,865 RGD:2290270
G Rsrc1 arginine/serine-rich coiled-coil 1 JBrowse link 3 66,981,364 67,358,403 RGD:2290270
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 JBrowse link 19 5,377,523 5,388,703 RGD:2290270
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 JBrowse link 5 113,742,444 113,772,400 RGD:2290270
G Scaf1 SR-related CTD-associated factor 1 JBrowse link 7 45,002,946 45,016,404 RGD:2290270
G Scaf4 SR-related CTD-associated factor 4 JBrowse link 16 90,228,950 90,286,140 RGD:2290270
G Scaf8 SR-related CTD-associated factor 8 JBrowse link 17 3,114,972 3,198,859 RGD:2290270
G Scnm1 sodium channel modifier 1 JBrowse link 3 95,129,719 95,134,050 RGD:2290270
G Sf1 splicing factor 1 JBrowse link 19 6,363,673 6,378,038 RGD:2290270
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 11 4,160,354 4,182,541 RGD:2290270
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 10 80,798,735 80,804,922 RGD:9068941
G Sf3a3 splicing factor 3a, subunit 3 JBrowse link 4 124,714,861 124,732,423 RGD:2290270
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 1 54,985,169 55,027,501 RGD:2290270
G Sf3b3 splicing factor 3b, subunit 3 JBrowse link 8 110,810,491 110,846,806 RGD:2290270
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 3 96,172,506 96,177,564 RGD:2290270
G Sf3b5 splicing factor 3b, subunit 5 JBrowse link 10 13,008,450 13,009,183 RGD:2290270
G Sf3b6 splicing factor 3B, subunit 6 JBrowse link 12 4,817,608 4,827,659 RGD:2290270
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) JBrowse link 4 127,020,716 127,051,101 RGD:2290270
G Sfswap splicing factor SWAP JBrowse link 5 129,501,231 129,571,384 RGD:2290270
G Slbp stem-loop binding protein JBrowse link 5 33,640,055 33,652,574 RGD:2290270
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) JBrowse link 11 43,433,726 43,447,982 RGD:2290270
G Smn1 survival motor neuron 1 JBrowse link 13 100,123,205 100,137,699 RGD:2290270
G Smndc1 survival motor neuron domain containing 1 JBrowse link 19 53,379,214 53,390,701 RGD:2290270
G Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) JBrowse link 4 40,735,649 40,757,885 RGD:2290270
G Snip1 Smad nuclear interacting protein 1 JBrowse link 4 125,066,672 125,074,043 RGD:2290270
G Snrnp200 small nuclear ribonucleoprotein 200 (U5) JBrowse link 2 127,208,386 127,240,453 RGD:2290270
G Snrnp25 small nuclear ribonucleoprotein 25 (U11/U12) JBrowse link 11 32,205,415 32,208,996 RGD:2290270
G Snrnp27 small nuclear ribonucleoprotein 27 (U4/U6.U5) JBrowse link 6 86,675,169 86,684,491 RGD:2290270
G Snrnp35 small nuclear ribonucleoprotein 35 (U11/U12) JBrowse link 5 124,483,081 124,493,586 RGD:2290270
G Snrnp40 small nuclear ribonucleoprotein 40 (U5) JBrowse link 4 130,360,132 130,390,033 RGD:2290270
G Snrnp48 small nuclear ribonucleoprotein 48 (U11/U12) JBrowse link 13 38,204,914 38,227,663 RGD:2290270
G Snrpa small nuclear ribonucleoprotein polypeptide A JBrowse link 7 27,187,006 27,196,271 RGD:2290270
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 7 66,060,336 66,074,587 RGD:2290270
G Snrpb small nuclear ribonucleoprotein B JBrowse link 2 130,171,636 130,179,382 RGD:2290270
G Snrpb2 U2 small nuclear ribonucleoprotein B JBrowse link 2 143,063,069 143,072,052 RGD:2290270
G Snrpd1 small nuclear ribonucleoprotein D1 JBrowse link 18 10,617,796 10,628,230 RGD:2290270
G Snrpd2 small nuclear ribonucleoprotein D2 JBrowse link 7 19,149,445 19,152,734 RGD:2290270
G Snrpd3 small nuclear ribonucleoprotein D3 JBrowse link 10 75,518,042 75,535,440 RGD:2290270
G Snrpe small nuclear ribonucleoprotein E JBrowse link 1 133,603,871 133,610,280 RGD:2290270
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 10 93,583,029 93,589,658 RGD:2290270
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 6 86,371,540 86,378,902 RGD:2290270
G Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) JBrowse link 15 82,041,345 82,047,598 RGD:2290270
G Snw1 SNW domain containing 1 JBrowse link 12 87,449,910 87,472,299 RGD:2290270
G Son Son DNA binding protein JBrowse link 16 91,647,824 91,679,192 RGD:2290270
G Srek1 splicing regulatory glutamine/lysine-rich protein 1 JBrowse link 13 103,738,565 103,774,616 RGD:2290270
G Srek1ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 JBrowse link 13 104,817,170 104,838,676 RGD:2290270
G Srpk1 serine/arginine-rich protein specific kinase 1 JBrowse link 17 28,587,648 28,622,528 RGD:2290270
G Srpk2 serine/arginine-rich protein specific kinase 2 JBrowse link 5 23,503,356 23,684,642 RGD:2290270
G Srrm1 serine/arginine repetitive matrix 1 JBrowse link 4 135,320,484 135,353,277 RGD:2290270
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 17 23,790,527 23,824,741 RGD:2290270
G Srrm4 serine/arginine repetitive matrix 4 JBrowse link 5 116,439,268 116,592,562 RGD:2290270
G Srrt serrate RNA effector molecule homolog (Arabidopsis) JBrowse link 5 137,295,704 137,307,716 RGD:2290270
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:2290270
G Srsf10 serine and arginine-rich splicing factor 10 JBrowse link 4 135,855,752 135,869,908 RGD:2290270
G Srsf12 serine and arginine-rich splicing factor 12 JBrowse link 4 33,208,991 33,233,343 RGD:2290270
G Srsf2 serine and arginine-rich splicing factor 2 JBrowse link 11 116,849,897 116,853,675 RGD:2290270
G Srsf3 serine and arginine-rich splicing factor 3 JBrowse link 17 29,032,660 29,043,372 RGD:2290270
G Srsf4 serine and arginine-rich splicing factor 4 JBrowse link 4 131,873,530 131,901,725 RGD:2290270
G Srsf5 serine and arginine-rich splicing factor 5 JBrowse link 12 80,945,495 80,950,507 RGD:2290270
G Srsf6 serine and arginine-rich splicing factor 6 JBrowse link 2 162,931,508 162,937,121 RGD:2290270
G Srsf7 serine and arginine-rich splicing factor 7 JBrowse link 17 80,200,080 80,207,369 RGD:2290270
G Srsf9 serine and arginine-rich splicing factor 9 JBrowse link 5 115,327,163 115,333,843 RGD:2290270
G Ssu72 Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) JBrowse link 4 155,704,815 155,733,879 RGD:2290270
G Strap serine/threonine kinase receptor associated protein JBrowse link 6 137,735,082 137,751,930 RGD:2290270
G Sugp1 SURP and G patch domain containing 1 JBrowse link 8 70,042,769 70,072,347 RGD:2290270
G Sugp2 SURP and G patch domain containing 2 JBrowse link 8 70,234,188 70,263,105 RGD:2290270
G Supt4a SPT4A, DSIF elongation factor subunit JBrowse link 11 87,737,551 87,743,623 RGD:2290270
G Supt4b SPT4B, DSIF elongation factor subunit JBrowse link 10 31,413,726 31,414,435 RGD:2290270
G Supt6 SPT6, histone chaperone and transcription elongation factor JBrowse link 11 78,206,749 78,245,972 RGD:2290270
G Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) JBrowse link 4 134,930,980 134,937,537 RGD:2290270
G Sympk symplekin JBrowse link 7 19,024,377 19,054,623 RGD:2290270
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein JBrowse link 9 88,449,364 88,482,591 RGD:2290270
G Tardbp TAR DNA binding protein JBrowse link 4 148,612,382 148,627,084 RGD:2290270
G Tcerg1 transcription elongation regulator 1 (CA150) JBrowse link 18 42,511,304 42,575,785 RGD:2290270
G Tdrd3 tudor domain containing 3 JBrowse link 14 87,416,178 87,545,508 RGD:2290270
G Tent2 terminal nucleotidyltransferase 2 JBrowse link 13 93,145,855 93,192,435 RGD:2290270
G Tent4a terminal nucleotidyltransferase 4A JBrowse link 13 69,497,952 69,534,236 RGD:2290270
G Tent4b terminal nucleotidyltransferase 4B JBrowse link 8 88,199,213 88,263,314 RGD:2290270
G Tfip11 tuftelin interacting protein 11 JBrowse link 5 112,326,369 112,338,073 RGD:2290270
G Thoc1 THO complex 1 JBrowse link 18 9,958,180 9,995,484 RGD:2290270
G Thoc2 THO complex 2 JBrowse link X 41,794,992 41,911,937 RGD:2290270
G Thoc3 THO complex 3 JBrowse link 13 54,458,837 54,468,840 RGD:2290270
G Thoc5 THO complex 5 JBrowse link 11 4,895,283 4,928,867 RGD:2290270
G Thoc6 THO complex 6 JBrowse link 17 23,668,618 23,673,917 RGD:2290270
G Thoc7 THO complex 7 JBrowse link 14 13,949,012 13,961,995 RGD:2290270
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link 4 126,164,082 126,202,755 RGD:2290270
G Tra2a transformer 2 alpha JBrowse link 6 49,243,921 49,264,248 RGD:2290270
G Tra2b transformer 2 beta JBrowse link 16 22,244,552 22,266,005 RGD:2290270
G Trub2 TruB pseudouridine (psi) synthase family member 2 JBrowse link 2 29,761,223 29,787,671 RGD:2290270
G Tsen15 tRNA splicing endonuclease subunit 15 JBrowse link 1 152,370,735 152,386,682 RGD:2290270
G Tsen2 tRNA splicing endonuclease subunit 2 JBrowse link 6 115,544,659 115,578,350 RGD:2290270
G Tsen34 tRNA splicing endonuclease subunit 34 JBrowse link 7 3,693,087 3,701,035 RGD:2290270
G Tsen54 tRNA splicing endonuclease subunit 54 JBrowse link 11 115,813,728 115,823,102 RGD:2290270
G Ttf2 transcription termination factor, RNA polymerase II JBrowse link 3 100,938,860 100,969,700 RGD:2290270
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link 19 8,953,832 8,966,210 RGD:2290270
G Tut4 terminal uridylyl transferase 4 JBrowse link 4 108,459,410 108,559,415 RGD:2290270
G Tut7 terminal uridylyl transferase 7 JBrowse link 13 59,771,876 59,823,169 RGD:2290270
G Txnl4b thioredoxin-like 4B JBrowse link 8 109,565,892 109,574,051 RGD:2290270
G U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 JBrowse link 17 31,647,081 31,659,148 RGD:2290270
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 JBrowse link 7 5,060,885 5,079,945 RGD:2290270
G Usp39 ubiquitin specific peptidase 39 JBrowse link 6 72,318,676 72,345,208 RGD:2290270
G Usp49 ubiquitin specific peptidase 49 JBrowse link 17 47,630,690 47,686,739 RGD:2290270
G Virma vir like m6A methyltransferase associated JBrowse link 4 11,485,958 11,551,143 RGD:2290270
G Wbp11 WW domain binding protein 11 JBrowse link 6 136,813,654 136,828,216 RGD:2290270
G Wbp4 WW domain binding protein 4 JBrowse link 14 79,459,937 79,481,268 RGD:2290270
G Wdr33 WD repeat domain 33 JBrowse link 18 31,804,057 31,908,987 RGD:2290270
G Wdr83 WD repeat domain containing 83 JBrowse link 8 85,075,035 85,080,746 RGD:2290270
G Wtap Wilms tumour 1-associating protein JBrowse link 17 12,966,799 12,992,543 RGD:2290270
G Xab2 XPA binding protein 2 JBrowse link 8 3,610,087 3,621,334 RGD:2290270
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 2 147,012,755 147,078,000 RGD:2290270
G Ybx1 Y box protein 1 JBrowse link 4 119,277,327 119,296,265 RGD:2290270
G Yju2 YJU2 splicing factor JBrowse link 17 55,959,187 55,967,951 RGD:2290270
G Ythdc1 YTH domain containing 1 JBrowse link 5 86,803,980 86,836,659 RGD:2290270
G Zc3h13 zinc finger CCCH type containing 13 JBrowse link 14 75,284,306 75,344,433 RGD:2290270
G Zcchc8 zinc finger, CCHC domain containing 8 JBrowse link 5 123,698,302 123,721,044 RGD:2290270
G Zcrb1 zinc finger CCHC-type and RNA binding motif 1 JBrowse link 15 93,386,106 93,398,341 RGD:2290270
G Zfp326 zinc finger protein 326 JBrowse link 5 105,876,556 105,915,818 RGD:2290270
G Zfp36l1 zinc finger protein 36, C3H type-like 1 JBrowse link 12 80,107,760 80,113,013 RGD:2290270
G Zfp830 zinc finger protein 830 JBrowse link 11 82,764,345 82,767,622 RGD:2290270
G Zmat2 zinc finger, matrin type 2 JBrowse link 18 36,793,923 36,799,660 RGD:2290270
G Zmat5 zinc finger, matrin type 5 JBrowse link 11 4,704,656 4,737,669 RGD:2290270
G Zpr1 ZPR1 zinc finger JBrowse link 9 46,273,064 46,282,643 RGD:2290270
G Zranb2 zinc finger, RAN-binding domain containing 2 JBrowse link 3 157,534,120 157,548,390 RGD:2290270
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 JBrowse link 11 22,972,005 22,976,496 RGD:2290270
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 JBrowse link X 163,932,594 163,958,666 RGD:2290270
mRNA splice site selection term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Celf1 CUGBP, Elav-like family member 1 JBrowse link 2 90,940,259 91,019,497 RGD:2290270
G Celf2 CUGBP, Elav-like family member 2 JBrowse link 2 6,539,694 7,396,341 RGD:2290270
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 3 94,478,285 94,496,786 RGD:2290270
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 25,477,620 25,754,520 RGD:2290270
G Celf5 CUGBP, Elav-like family member 5 JBrowse link 10 81,459,227 81,482,730 RGD:2290270
G Celf6 CUGBP, Elav-like family member 6 JBrowse link 9 59,578,287 59,609,033 RGD:2290270
G Khdc4 KH domain containing 4, pre-mRNA splicing factor JBrowse link 3 88,685,428 88,712,933 RGD:2290270
G Luc7l Luc7-like JBrowse link 17 26,252,899 26,285,510 RGD:2290270
G Luc7l2 LUC7-like 2 (S. cerevisiae) JBrowse link 6 38,551,334 38,609,953 RGD:2290270
G Luc7l3 LUC7-like 3 (S. cerevisiae) JBrowse link 11 94,291,073 94,322,329 RGD:2290270
G Mbnl1 muscleblind like splicing factor 1 JBrowse link 3 60,472,559 60,629,750 RGD:2290270
G Nol3 nucleolar protein 3 (apoptosis repressor with CARD domain) JBrowse link 8 105,276,145 105,281,939 RGD:2290270
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 3 119,718,741 119,784,647 RGD:2290270
G Puf60 poly-U binding splicing factor 60 JBrowse link 15 76,070,182 76,082,537 RGD:2290270
G Rbmx RNA binding motif protein, X chromosome JBrowse link X 57,383,348 57,393,046 RGD:2290270
G Rbmxl1 RNA binding motif protein, X-linked like-1 JBrowse link 8 78,505,269 78,508,928 RGD:2290270
G Setx senataxin JBrowse link 2 29,123,588 29,182,471 RGD:2290270
G Srsf10 serine and arginine-rich splicing factor 10 JBrowse link 4 135,855,752 135,869,908 RGD:2290270
G Srsf6 serine and arginine-rich splicing factor 6 JBrowse link 2 162,931,508 162,937,121 RGD:2290270
G Ythdc1 YTH domain containing 1 JBrowse link 5 86,803,980 86,836,659 RGD:2290270
mRNA splicing, via endonucleolytic cleavage and ligation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ern1 endoplasmic reticulum (ER) to nucleus signalling 1 JBrowse link 11 106,397,620 106,487,796 RGD:2290270
mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqr aquarius JBrowse link 2 114,101,161 114,175,339 RGD:2290270
G Bcas2 breast carcinoma amplified sequence 2 JBrowse link 3 103,171,655 103,179,163 RGD:2290270
G Bud13 BUD13 homolog JBrowse link 9 46,282,976 46,298,783 RGD:2290270
G Bud31 BUD31 homolog JBrowse link 5 145,140,376 145,148,078 RGD:2290270
G Casc3 cancer susceptibility candidate 3 JBrowse link 11 98,809,808 98,833,807 RGD:2290270
G Cdc40 cell division cycle 40 JBrowse link 10 40,831,621 40,883,143 RGD:2290270
G Cdc5l cell division cycle 5-like (S. pombe) JBrowse link 17 45,391,887 45,433,707 RGD:2290270
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 2 145,917,482 145,934,700 RGD:2290270
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 9 14,500,604 14,510,620 RGD:2290270
G Cwc22 CWC22 spliceosome-associated protein JBrowse link 2 77,881,159 77,946,356 RGD:2290270
G Cwc25 CWC25 spliceosome-associated protein JBrowse link 11 97,745,470 97,766,613 RGD:2290270
G Cwf19l1 CWF19-like 1, cell cycle control (S. pombe) JBrowse link 19 44,108,637 44,135,876 RGD:2290270
G Cwf19l2 CWF19-like 2, cell cycle control (S. pombe) JBrowse link 9 3,403,592 3,479,236 RGD:2290270
G Dbr1 debranching RNA lariats 1 JBrowse link 9 99,575,786 99,585,007 RGD:2290270
G Ddx23 DEAD box helicase 23 JBrowse link 15 98,645,379 98,662,928 RGD:2290270
G Ddx39a DEAD box helicase 39a JBrowse link 8 83,715,177 83,726,904 RGD:2290270
G Ddx39b DEAD box helicase 39b JBrowse link 17 35,241,746 35,253,707 RGD:2290270
G Ddx41 DEAD box helicase 41 JBrowse link 13 55,530,410 55,536,658 RGD:2290270
G Ddx46 DEAD box helicase 46 JBrowse link 13 55,634,975 55,681,267 RGD:2290270
G Dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 JBrowse link 17 35,879,764 35,892,670 RGD:2290270
G Dhx38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 JBrowse link 8 109,547,999 109,565,861 RGD:2290270
G Dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 JBrowse link 11 101,732,956 101,767,358 RGD:2290270
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link 11 102,838,472 102,880,984 RGD:2290270
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 11 119,288,363 119,300,043 RGD:2290270
G Gm13691 predicted gene 13691 JBrowse link 2 83,990,465 83,993,518 RGD:2290270
G Gm13695 predicted gene 13695 JBrowse link 2 83,967,225 83,970,278 RGD:2290270
G Gm16381 predicted gene 16381 JBrowse link 12 87,644,118 87,648,983 RGD:2290270
G Gpkow G patch domain and KOW motifs JBrowse link X 7,697,134 7,710,261 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 14 52,073,377 52,104,039 RGD:2290270
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 17 33,646,233 33,685,458 RGD:2290270
G Htatsf1 HIV TAT specific factor 1 JBrowse link X 57,053,570 57,067,183 RGD:2290270
G Ik IK cytokine JBrowse link 18 36,744,656 36,757,639 RGD:2290270
G Isy1 ISY1 splicing factor homolog JBrowse link 6 87,818,447 87,838,923 RGD:9068941
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 17 34,981,854 34,985,891 RGD:2290270
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 6 91,516,035 91,522,620 RGD:2290270
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 70,673,231 70,678,752 RGD:2290270
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 6 56,701,063 56,704,699 RGD:2290270
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 8 78,804,868 78,821,152 RGD:2290270
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 10 80,852,825 80,855,209 RGD:2290270
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated JBrowse link 6 18,848,635 18,854,052 RGD:2290270
G Magohb mago homolog B, exon junction complex core component JBrowse link 6 131,284,389 131,293,244 RGD:2290270
G Mettl14 methyltransferase like 14 JBrowse link 3 123,368,295 123,385,990 RGD:2290270
G Mettl3 methyltransferase like 3 JBrowse link 14 52,294,841 52,308,741 RGD:2290270
G Mfap1a microfibrillar-associated protein 1A JBrowse link 2 121,492,681 121,506,656 RGD:2290270
G Mfap1b microfibrillar-associated protein 1B JBrowse link 2 121,461,666 121,474,023 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncbp2 nuclear cap binding protein subunit 2 JBrowse link 16 31,948,546 31,958,472 RGD:2290270
G Nono non-POU-domain-containing, octamer binding protein JBrowse link X 101,429,560 101,448,593 RGD:2290270
G Nova1 NOVA alternative splicing regulator 1 JBrowse link 12 46,697,895 46,819,480 RGD:2290270
G Nova2 NOVA alternative splicing regulator 2 JBrowse link 7 18,925,888 18,965,319 RGD:2290270
G Phf5a PHD finger protein 5A JBrowse link 15 81,864,516 81,871,892 RGD:2290270
G Plrg1 pleiotropic regulator 1 JBrowse link 3 83,055,538 83,072,291 RGD:2290270
G Ppie peptidylprolyl isomerase E (cyclophilin E) JBrowse link 4 123,127,114 123,139,990 RGD:2290270
G Ppil1 peptidylprolyl isomerase (cyclophilin)-like 1 JBrowse link 17 29,250,835 29,263,971 RGD:2290270
G Prpf19 pre-mRNA processing factor 19 JBrowse link 19 10,895,231 10,909,559 RGD:2290270
G Prpf3 pre-mRNA processing factor 3 JBrowse link 3 95,830,124 95,855,885 RGD:2290270
G Prpf31 pre-mRNA processing factor 31 JBrowse link 7 3,629,985 3,642,485 RGD:2290270
G Prpf38a PRP38 pre-mRNA processing factor 38 (yeast) domain containing A JBrowse link 4 108,564,867 108,579,336 RGD:2290270
G Prpf4 pre-mRNA processing factor 4 JBrowse link 4 62,408,762 62,426,990 RGD:2290270
G Prpf40a pre-mRNA processing factor 40A JBrowse link 2 53,134,702 53,191,438 RGD:2290270
G Prpf40b pre-mRNA processing factor 40B JBrowse link 15 99,295,076 99,317,018 RGD:2290270
G Prpf6 pre-mRNA splicing factor 6 JBrowse link 2 181,601,319 181,655,661 RGD:2290270
G Prpf8 pre-mRNA processing factor 8 JBrowse link 11 75,486,777 75,509,447 RGD:2290270
G Pspc1 paraspeckle protein 1 JBrowse link 14 56,722,441 56,778,318 RGD:2290270
G Raver1 ribonucleoprotein, PTB-binding 1 JBrowse link 9 21,074,158 21,091,999 RGD:2290270
G Raver2 ribonucleoprotein, PTB-binding 2 JBrowse link 4 101,069,038 101,152,370 RGD:2290270
G Rbm10 RNA binding motif protein 10 JBrowse link X 20,617,357 20,650,889 RGD:2290270
G Rbm15 RNA binding motif protein 15 JBrowse link 3 107,305,511 107,334,460 RGD:2290270
G Rbm15b RNA binding motif protein 15B JBrowse link 9 106,880,928 106,887,075 RGD:2290270
G Rbm22 RNA binding motif protein 22 JBrowse link 18 60,560,786 60,572,729 RGD:2290270
G Rbm41 RNA binding motif protein 41 JBrowse link X 139,889,511 139,998,595 RGD:2290270
G Rbm5 RNA binding motif protein 5 JBrowse link 9 107,740,495 107,771,007 RGD:2290270
G Rbm6 RNA binding motif protein 6 JBrowse link 9 107,773,559 107,873,358 RGD:2290270
G Rbm8a RNA binding motif protein 8a JBrowse link 3 96,629,928 96,633,791 RGD:2290270
G Rbmx2 RNA binding motif protein, X-linked 2 JBrowse link X 48,695,004 48,710,719 RGD:2290270
G Rnf113a1 ring finger protein 113A1 JBrowse link X 37,191,222 37,192,467 RGD:9068941
G Rnf113a2 ring finger protein 113A2 JBrowse link 12 84,417,200 84,418,578 RGD:2290270
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 JBrowse link 3 113,605,067 113,630,149 RGD:2290270
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 17 24,414,646 24,425,898 RGD:2290270
G Rsrc1 arginine/serine-rich coiled-coil 1 JBrowse link 3 66,981,364 67,358,403 RGD:2290270
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 JBrowse link 19 5,377,523 5,388,703 RGD:2290270
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 JBrowse link 5 113,742,444 113,772,400 RGD:2290270
G Sf1 splicing factor 1 JBrowse link 19 6,363,673 6,378,038 RGD:2290270
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 11 4,160,354 4,182,541 RGD:2290270
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 10 80,798,735 80,804,922 RGD:2290270
G Sf3a3 splicing factor 3a, subunit 3 JBrowse link 4 124,714,861 124,732,423 RGD:2290270
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 1 54,985,169 55,027,501 RGD:2290270
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 19 5,273,921 5,295,457 RGD:2290270
G Sf3b3 splicing factor 3b, subunit 3 JBrowse link 8 110,810,491 110,846,806 RGD:2290270
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 3 96,172,506 96,177,564 RGD:2290270
G Sf3b5 splicing factor 3b, subunit 5 JBrowse link 10 13,008,450 13,009,183 RGD:2290270
G Sf3b6 splicing factor 3B, subunit 6 JBrowse link 12 4,817,608 4,827,659 RGD:2290270
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) JBrowse link 4 127,020,716 127,051,101 RGD:2290270
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) JBrowse link 11 43,433,726 43,447,982 RGD:2290270
G Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) JBrowse link 4 40,735,649 40,757,885 RGD:2290270
G Snip1 Smad nuclear interacting protein 1 JBrowse link 4 125,066,672 125,074,043 RGD:2290270
G Snrnp200 small nuclear ribonucleoprotein 200 (U5) JBrowse link 2 127,208,386 127,240,453 RGD:2290270
G Snrnp25 small nuclear ribonucleoprotein 25 (U11/U12) JBrowse link 11 32,205,415 32,208,996 RGD:2290270
G Snrnp35 small nuclear ribonucleoprotein 35 (U11/U12) JBrowse link 5 124,483,081 124,493,586 RGD:2290270
G Snrnp70 small nuclear ribonucleoprotein 70 (U1) JBrowse link 7 45,376,454 45,395,742 RGD:2290270
G Snrpa small nuclear ribonucleoprotein polypeptide A JBrowse link 7 27,187,006 27,196,271 RGD:2290270
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 7 66,060,336 66,074,587 RGD:2290270
G Snrpb small nuclear ribonucleoprotein B JBrowse link 2 130,171,636 130,179,382 RGD:2290270
G Snrpb2 U2 small nuclear ribonucleoprotein B JBrowse link 2 143,063,069 143,072,052 RGD:2290270
G Snrpc U1 small nuclear ribonucleoprotein C JBrowse link 17 27,840,028 27,851,968 RGD:2290270
G Snrpd1 small nuclear ribonucleoprotein D1 JBrowse link 18 10,617,796 10,628,230 RGD:2290270
G Snrpd2 small nuclear ribonucleoprotein D2 JBrowse link 7 19,149,445 19,152,734 RGD:2290270
G Snrpd3 small nuclear ribonucleoprotein D3 JBrowse link 10 75,518,042 75,535,440 RGD:2290270
G Snrpe small nuclear ribonucleoprotein E JBrowse link 1 133,603,871 133,610,280 RGD:2290270
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 10 93,583,029 93,589,658 RGD:2290270
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 6 86,371,540 86,378,902 RGD:2290270
G Snrpn small nuclear ribonucleoprotein N JBrowse link 7 59,982,495 60,450,177 RGD:2290270
G Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) JBrowse link 15 82,041,345 82,047,598 RGD:2290270
G Snw1 SNW domain containing 1 JBrowse link 12 87,449,910 87,472,299 RGD:2290270
G Spen spen family transcription repressor JBrowse link 4 141,467,885 141,538,644 RGD:2290270
G Srrm1 serine/arginine repetitive matrix 1 JBrowse link 4 135,320,484 135,353,277 RGD:2290270
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 17 23,790,527 23,824,741 RGD:9068941
G Srsf10 serine and arginine-rich splicing factor 10 JBrowse link 4 135,855,752 135,869,908 RGD:2290270
G Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) JBrowse link 4 134,930,980 134,937,537 RGD:2290270
G Tra2a transformer 2 alpha JBrowse link 6 49,243,921 49,264,248 RGD:2290270
G Tra2b transformer 2 beta JBrowse link 16 22,244,552 22,266,005 RGD:2290270
G Txnl4a thioredoxin-like 4A JBrowse link 18 80,206,826 80,225,851 RGD:2290270
G Txnl4b thioredoxin-like 4B JBrowse link 8 109,565,892 109,574,051 RGD:2290270
G U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 JBrowse link 17 31,647,081 31,659,148 RGD:2290270
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 JBrowse link 7 30,563,340 30,565,364 RGD:2290270
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 JBrowse link 7 5,060,885 5,079,945 RGD:2290270
G Ubl5 ubiquitin-like 5 JBrowse link 9 20,642,717 20,647,140 RGD:2290270
G Usp39 ubiquitin specific peptidase 39 JBrowse link 6 72,318,676 72,345,208 RGD:2290270
G Usp49 ubiquitin specific peptidase 49 JBrowse link 17 47,630,690 47,686,739 RGD:2290270
G Wbp4 WW domain binding protein 4 JBrowse link 14 79,459,937 79,481,268 RGD:2290270
G Wdr83 WD repeat domain containing 83 JBrowse link 8 85,075,035 85,080,746 RGD:2290270
G Xab2 XPA binding protein 2 JBrowse link 8 3,610,087 3,621,334 RGD:2290270
G Ythdc1 YTH domain containing 1 JBrowse link 5 86,803,980 86,836,659 RGD:2290270
G Zcrb1 zinc finger CCHC-type and RNA binding motif 1 JBrowse link 15 93,386,106 93,398,341 RGD:2290270
G Zmat2 zinc finger, matrin type 2 JBrowse link 18 36,793,923 36,799,660 RGD:2290270
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 JBrowse link 11 22,972,005 22,976,496 RGD:2290270
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 JBrowse link X 163,932,594 163,958,666 RGD:2290270
ncRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nat10 N-acetyltransferase 10 JBrowse link 2 103,721,258 103,762,954 RGD:2290270
G Zcchc8 zinc finger, CCHC domain containing 8 JBrowse link 5 123,698,302 123,721,044 RGD:2290270
negative regulation of mRNA polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnt1 cyclin T1 JBrowse link 15 98,538,690 98,567,736 RGD:2290270
G Cdk9 cyclin-dependent kinase 9 (CDC2-related kinase) JBrowse link 2 32,705,782 32,712,784 RGD:2290270
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 7 111,028,951 111,056,377 RGD:2290270
G Nelfe negative elongation factor complex member E, Rdbp JBrowse link 17 34,850,391 34,856,372 RGD:2290270
G Rnf20 ring finger protein 20 JBrowse link 4 49,632,005 49,656,887 RGD:2290270
G Rnf40 ring finger protein 40 JBrowse link 7 127,588,698 127,603,605 RGD:2290270
G Supt5 suppressor of Ty 5, DSIF elongation factor subunit JBrowse link 7 28,314,891 28,338,804 RGD:2290270
G Zc3h14 zinc finger CCCH type containing 14 JBrowse link 12 98,742,017 98,787,774 RGD:2290270
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acin1 apoptotic chromatin condensation inducer 1 JBrowse link 14 54,642,161 54,686,965 RGD:2290270
G Akr1c6 aldo-keto reductase family 1, member C6 JBrowse link 13 4,434,311 4,457,530 RGD:2290270
G C1qbp complement component 1, q subcomponent binding protein JBrowse link 11 70,977,846 70,983,026 RGD:2290270
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 25,477,620 25,754,520 RGD:2290270
G Dyrk1a dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a JBrowse link 16 94,569,947 94,695,519 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 13 58,391,132 58,403,343 RGD:2290270
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 7 28,808,546 28,822,268 RGD:2290270
G Npm1 nucleophosmin 1 JBrowse link 11 33,152,498 33,164,142 RGD:2290270
G Pcbp4 poly(rC) binding protein 4 JBrowse link 9 106,452,982 106,464,012 RGD:2290270
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 10 79,854,432 79,864,435 RGD:2290270
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 4 59,471,868 59,549,378 RGD:2290270
G Rbm10 RNA binding motif protein 10 JBrowse link X 20,617,357 20,650,889 RGD:2290270
G Rbm42 RNA binding motif protein 42 JBrowse link 7 30,640,995 30,650,228 RGD:2290270
G Rbmxl1 RNA binding motif protein, X-linked like-1 JBrowse link 8 78,505,269 78,508,928 RGD:2290270
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 17 24,414,646 24,425,898 RGD:2290270
G Sap18 Sin3-associated polypeptide 18 JBrowse link 14 57,798,189 57,804,980 RGD:9068941
G Sfswap splicing factor SWAP JBrowse link 5 129,501,231 129,571,384 RGD:2290270
G Srsf10 serine and arginine-rich splicing factor 10 JBrowse link 4 135,855,752 135,869,908 RGD:2290270
G Srsf4 serine and arginine-rich splicing factor 4 JBrowse link 4 131,873,530 131,901,725 RGD:2290270
G Srsf6 serine and arginine-rich splicing factor 6 JBrowse link 2 162,931,508 162,937,121 RGD:2290270
G Srsf7 serine and arginine-rich splicing factor 7 JBrowse link 17 80,200,080 80,207,369 RGD:2290270
G Srsf9 serine and arginine-rich splicing factor 9 JBrowse link 5 115,327,163 115,333,843 RGD:2290270
G Tra2b transformer 2 beta JBrowse link 16 22,244,552 22,266,005 RGD:2290270
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 JBrowse link 7 5,060,885 5,079,945 RGD:2290270
negative regulation of pre-miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcdin3d BCDIN3 domain containing JBrowse link 15 99,470,084 99,474,730 RGD:2290270
G Lin28b lin-28 homolog B (C. elegans) JBrowse link 10 45,376,617 45,486,314 RGD:2290270
negative regulation of primary miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il6 interleukin 6 JBrowse link 5 30,013,114 30,019,975 RGD:2290270
G Lin28b lin-28 homolog B (C. elegans) JBrowse link 10 45,376,617 45,486,314 RGD:2290270
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
G Stat3 signal transducer and activator of transcription 3 JBrowse link 11 100,886,806 100,939,594 RGD:2290270
negative regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:2290270
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 11 62,315,663 62,457,414 RGD:2290270
G Ncor2 nuclear receptor co-repressor 2 JBrowse link 5 125,017,153 125,179,238 RGD:2290270
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform JBrowse link 3 136,669,714 136,937,727 RGD:2290270
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:2290270
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:2290270
G Zc3h10 zinc finger CCCH type containing 10 JBrowse link 10 128,543,560 128,548,008 RGD:2290270
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 4 125,118,414 125,127,881 RGD:2290270
G Zmpste24 zinc metallopeptidase, STE24 JBrowse link 4 121,059,237 121,098,249 RGD:2290270
negative regulation of production of siRNA involved in RNA interference term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tert telomerase reverse transcriptase JBrowse link 13 73,626,911 73,649,843 RGD:2290270
negative regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 thymoma viral proto-oncogene 2 JBrowse link 7 27,591,552 27,640,826 RGD:2290270
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 10 79,854,432 79,864,435 RGD:2290270
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 3 119,718,741 119,784,647 RGD:2290270
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 4 59,471,868 59,549,378 RGD:2290270
G Rps13 ribosomal protein S13 JBrowse link 7 116,331,507 116,334,190 RGD:2290270
G Rps26 ribosomal protein S26 JBrowse link 10 128,624,529 128,626,506 RGD:2290270
G Tmbim6 transmembrane BAX inhibitor motif containing 6 JBrowse link 15 99,392,947 99,410,049 RGD:2290270
negative regulation of rRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kat2b K(lysine) acetyltransferase 2B JBrowse link 17 53,566,774 53,672,721 RGD:2290270
G Shq1 SHQ1 homolog (S. cerevisiae) JBrowse link 6 100,571,811 100,671,183 RGD:2290270
polyadenylation-dependent snoRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Exosc2 exosome component 2 JBrowse link 2 31,670,715 31,681,352 RGD:2290270
G Exosc3 exosome component 3 JBrowse link 4 45,316,613 45,320,616 RGD:2290270
G Exosc4 exosome component 4 JBrowse link 15 76,327,397 76,330,670 RGD:2290270
G Exosc5 exosome component 5 JBrowse link 7 25,659,153 25,668,032 RGD:2290270
G Exosc6 exosome component 6 JBrowse link 8 111,056,339 111,057,664 RGD:2290270
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) JBrowse link 16 13,537,964 13,668,198 RGD:2290270
positive regulation of mRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1 cyclin B1 JBrowse link 13 100,778,739 100,786,486 RGD:2290270
G Cdc73 cell division cycle 73, Paf1/RNA polymerase II complex component JBrowse link 1 143,603,276 143,702,893 RGD:2290270
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 JBrowse link 3 62,468,015 62,507,034 RGD:2290270
G Leo1 Leo1, Paf1/RNA polymerase II complex component JBrowse link 9 75,441,015 75,466,432 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncbp2 nuclear cap binding protein subunit 2 JBrowse link 16 31,948,546 31,958,472 RGD:2290270
G Paf1 Paf1, RNA polymerase II complex component JBrowse link 7 28,392,996 28,399,383 RGD:2290270
positive regulation of mRNA polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 7 81,347,026 81,458,001 RGD:2290270
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 19 37,019,341 37,207,620 RGD:2290270
G Hsf1 heat shock factor 1 JBrowse link 15 76,477,362 76,501,155 RGD:2290270
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 JBrowse link 8 94,019,403 94,037,039 RGD:2290270
positive regulation of mRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 10 77,290,727 77,418,292 RGD:2290270
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 3 94,478,285 94,496,786 RGD:2290270
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 25,477,620 25,754,520 RGD:2290270
G Cirbp cold inducible RNA binding protein JBrowse link 10 80,165,990 80,172,786 RGD:2290270
G Dazap1 DAZ associated protein 1 JBrowse link 10 80,261,362 80,288,408 RGD:2290270
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 11 119,288,363 119,300,043 RGD:2290270
G Gm10352 predicted gene 10352 JBrowse link Y 2,900,989 2,912,210 RGD:2290270
G Gm21693 predicted gene, 21693 JBrowse link Y 3,326,746 3,345,329 RGD:2290270
G Gm3376 predicted gene 3376 JBrowse link Y 3,771,673 3,783,271 RGD:2290270
G Gm4064 predicted gene 4064 JBrowse link Y 2,785,165 2,796,224 RGD:2290270
G Gm7324 predicted gene 7324 JBrowse link 14 43,713,734 43,715,370 RGD:2290270
G Hmx2 H6 homeobox 2 JBrowse link 7 131,548,757 131,558,014 RGD:2290270
G Hspa8 heat shock protein 8 JBrowse link 9 40,801,276 40,805,202 RGD:2290270
G Lmntd2 lamin tail domain containing 2 JBrowse link 7 141,209,990 141,215,517 RGD:2290270
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 4 46,138,511 46,172,403 RGD:2290270
G Ncl nucleolin JBrowse link 1 86,344,719 86,359,455 RGD:2290270
G Nup98 nucleoporin 98 JBrowse link 7 102,119,400 102,210,166 RGD:2290270
G Obi1 ORC ubiquitin ligase 1 JBrowse link 14 104,477,534 104,522,712 RGD:2290270
G Prdx6 peroxiredoxin 6 JBrowse link 1 161,240,112 161,251,210 RGD:2290270
G Prpf19 pre-mRNA processing factor 19 JBrowse link 19 10,895,231 10,909,559 RGD:2290270
G Rbm3 RNA binding motif (RNP1, RRM) protein 3 JBrowse link X 8,138,975 8,145,880 RGD:2290270
G Rbmx RNA binding motif protein, X chromosome JBrowse link X 57,383,348 57,393,046 RGD:2290270
G Rbmxl1 RNA binding motif protein, X-linked like-1 JBrowse link 8 78,505,269 78,508,928 RGD:2290270
G Rbmxl2 RNA binding motif protein, X-linked-like 2 JBrowse link 7 107,209,445 107,210,916 RGD:2290270
G Rbmy RNA binding motif protein, Y chromosome JBrowse link Y 2,830,680 2,841,858 RGD:2290270
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 3 96,172,506 96,177,564 RGD:2290270
G Slc39a5 solute carrier family 39 (metal ion transporter), member 5 JBrowse link 10 128,395,927 128,401,276 RGD:2290270
G Snrnp70 small nuclear ribonucleoprotein 70 (U1) JBrowse link 7 45,376,454 45,395,742 RGD:2290270
G Snw1 SNW domain containing 1 JBrowse link 12 87,449,910 87,472,299 RGD:2290270
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link 4 126,164,082 126,202,755 RGD:2290270
G Tra2a transformer 2 alpha JBrowse link 6 49,243,921 49,264,248 RGD:2290270
G Tra2b transformer 2 beta JBrowse link 16 22,244,552 22,266,005 RGD:2290270
G Zfp64 zinc finger protein 64 JBrowse link 2 168,893,331 168,955,587 RGD:2290270
positive regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Ddx5 DEAD box helicase 5 JBrowse link 11 106,780,355 106,789,185 RGD:2290270
G Egfr epidermal growth factor receptor JBrowse link 11 16,752,203 16,913,907 RGD:2290270
G Il6 interleukin 6 JBrowse link 5 30,013,114 30,019,975 RGD:2290270
G Lin28a lin-28 homolog A (C. elegans) JBrowse link 4 134,003,330 134,019,196 RGD:2290270
G Map2k1 mitogen-activated protein kinase kinase 1 JBrowse link 9 64,185,769 64,253,605 RGD:2290270
G Map2k2 mitogen-activated protein kinase kinase 2 JBrowse link 10 81,105,913 81,124,697 RGD:2290270
G Myocd myocardin JBrowse link 11 65,173,608 65,269,989 RGD:2290270
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 13 78,188,971 78,198,873 RGD:2290270
G Ripk1 receptor (TNFRSF)-interacting serine-threonine kinase 1 JBrowse link 13 34,002,225 34,035,170 RGD:2290270
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:2290270
positive regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dyrk1a dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a JBrowse link 16 94,569,947 94,695,519 RGD:2290270
G Ern1 endoplasmic reticulum (ER) to nucleus signalling 1 JBrowse link 11 106,397,620 106,487,796 RGD:2290270
G Habp4 hyaluronic acid binding protein 4 JBrowse link 13 64,161,866 64,186,537 RGD:2290270
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 13 58,391,132 58,403,343 RGD:2290270
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like JBrowse link 17 80,029,487 80,062,268 RGD:2290270
G Hspa1a heat shock protein 1A JBrowse link 17 34,969,359 34,972,156 RGD:9068941
G Hspa1b heat shock protein 1B JBrowse link 17 34,956,429 34,959,238 RGD:9068941
G Khdrbs3 KH domain containing, RNA binding, signal transduction associated 3 JBrowse link 15 68,928,392 69,101,794 RGD:2290270
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 13 101,680,761 101,768,217 RGD:2290270
G Polr2a polymerase (RNA) II (DNA directed) polypeptide A JBrowse link 11 69,733,997 69,758,633 RGD:2290270
G Rbm20 RNA binding motif protein 20 JBrowse link 19 53,660,989 53,867,083 RGD:2290270
G Rbm22 RNA binding motif protein 22 JBrowse link 18 60,560,786 60,572,729 RGD:2290270
G Setx senataxin JBrowse link 2 29,123,588 29,182,471 RGD:2290270
G Slc38a2 solute carrier family 38, member 2 JBrowse link 15 96,687,392 96,699,728 RGD:2290270
G Smn1 survival motor neuron 1 JBrowse link 13 100,123,205 100,137,699 RGD:2290270
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:2290270
G Srsf5 serine and arginine-rich splicing factor 5 JBrowse link 12 80,945,495 80,950,507 RGD:2290270
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 JBrowse link 7 5,060,885 5,079,945 RGD:2290270
G Zpr1 ZPR1 zinc finger JBrowse link 9 46,273,064 46,282,643 RGD:2290270
positive regulation of rRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor JBrowse link 5 135,052,957 135,064,959 RGD:2290270
G Dimt1 DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) JBrowse link 13 106,947,071 106,961,325 RGD:2290270
G Heatr1 HEAT repeat containing 1 JBrowse link 13 12,395,375 12,438,893 RGD:2290270
G Riok1 RIO kinase 1 JBrowse link 13 38,036,989 38,061,433 RGD:2290270
G Riok2 RIO kinase 2 JBrowse link 17 17,374,332 17,394,899 RGD:2290270
G Sirt7 sirtuin 7 JBrowse link 11 120,618,371 120,625,014 RGD:2290270
G Trmt112 tRNA methyltransferase 11-2 JBrowse link 19 6,909,698 6,911,028 RGD:2290270
G Utp15 UTP15 small subunit processome component JBrowse link 13 98,246,845 98,262,992 RGD:2290270
G Wdr43 WD repeat domain 43 JBrowse link 17 71,616,178 71,659,031 RGD:2290270
G Wdr75 WD repeat domain 75 JBrowse link 1 45,795,153 45,823,638 RGD:2290270
pre-miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 3 89,714,469 89,753,455 RGD:2290270
G Ago1 argonaute RISC catalytic subunit 1 JBrowse link 4 126,435,012 126,468,707 RGD:2290270
G Ago2 argonaute RISC catalytic subunit 2 JBrowse link 15 73,101,625 73,184,947 RGD:2290270
G Ago3 argonaute RISC catalytic subunit 3 JBrowse link 4 126,326,994 126,431,670 RGD:2290270
G Ago4 argonaute RISC catalytic subunit 4 JBrowse link 4 126,489,487 126,533,586 RGD:2290270
G Dicer1 dicer 1, ribonuclease type III JBrowse link 12 104,687,