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ONTOLOGY REPORT - ANNOTATIONS


Term:arginine biosynthetic process
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Accession:GO:0006526 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
Synonyms:exact_synonym: arginine anabolism;   arginine biosynthesis;   arginine formation;   arginine synthesis
 xref: MIPS_funcat:01.01.03.05.01;   MetaCyc:ARGININE-SYN4-PWY;   MetaCyc:ARGSYN-PWY;   MetaCyc:ARGSYNBSUB-PWY


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arginine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:632221
G Ass1 argininosuccinate synthase 1 JBrowse link 3 10,327,411 10,375,847 RGD:631755
RGD:13792537
RGD:1624291
RGD:12859071
RGD:1600115
G Nags N-acetylglutamate synthase JBrowse link 10 90,084,607 90,089,693 RGD:13792537
arginine biosynthetic process via ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:1600115
RGD:13792537
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19312
    metabolic process 11535
      primary metabolic process 10404
        cellular amino acid metabolic process 269
          cellular amino acid biosynthetic process 67
            alpha-amino acid biosynthetic process 63
              glutamine family amino acid biosynthetic process 18
                arginine biosynthetic process 4
                  arginine biosynthetic process via ornithine + 2
                  positive regulation of arginine biosynthetic process + 0
                  regulation of arginine biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19312
    metabolic process 11535
      cellular metabolic process 10566
        organic acid metabolic process 1026
          oxoacid metabolic process 1000
            carboxylic acid metabolic process 955
              cellular amino acid metabolic process 269
                alpha-amino acid metabolic process 196
                  glutamine family amino acid metabolic process 75
                    arginine metabolic process 19
                      arginine biosynthetic process 4
                        arginine biosynthetic process via ornithine + 2
                        positive regulation of arginine biosynthetic process + 0
                        regulation of arginine biosynthetic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.