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ONTOLOGY REPORT - ANNOTATIONS


Term:arginine catabolic process
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Accession:GO:0006527 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
Synonyms:exact_synonym: arginine breakdown;   arginine catabolism;   arginine degradation
 xref: MIPS_funcat:01.01.03.05.02


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arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddah1 dimethylarginine dimethylaminohydrolase 1 JBrowse link 2 251,634,368 251,766,009 RGD:1624291
G Ddah2 dimethylarginine dimethylaminohydrolase 2 JBrowse link 20 5,049,260 5,052,573 RGD:1600115
G Fah fumarylacetoacetate hydrolase JBrowse link 1 146,713,663 146,736,339 RGD:1624291
RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:8553334
RGD:13792537
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:1624291
RGD:13792537
RGD:1600115
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:1600115
RGD:13792537
RGD:1624291
arginine catabolic process to glutamate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:13792537
arginine catabolic process to ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:8693655
RGD:13792537
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:1358311
RGD:13792537
RGD:8693655
arginine catabolic process to proline via ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:13792537
arginine deiminase pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Padi3 peptidyl arginine deiminase 3 JBrowse link 5 159,309,000 159,336,429 RGD:69926
negative regulation of arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 13 50,091,644 50,153,808 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      primary metabolic process 10411
        cellular amino acid metabolic process 266
          cellular amino acid catabolic process 104
            alpha-amino acid catabolic process 90
              glutamine family amino acid catabolic process 27
                arginine catabolic process 11
                  arginine catabolic process to alanine via ornithine 0
                  arginine catabolic process to glutamate 1
                  arginine catabolic process to ornithine 2
                  arginine catabolic process to proline + 1
                  arginine catabolic process to spermine 0
                  arginine catabolic process to succinate 0
                  arginine deiminase pathway 1
                  negative regulation of arginine catabolic process + 1
                  regulation of arginine catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      cellular metabolic process 10567
        organic acid metabolic process 1030
          oxoacid metabolic process 1004
            carboxylic acid metabolic process 959
              cellular amino acid metabolic process 266
                alpha-amino acid metabolic process 192
                  glutamine family amino acid metabolic process 75
                    arginine metabolic process 20
                      arginine catabolic process 11
                        arginine catabolic process to alanine via ornithine 0
                        arginine catabolic process to glutamate 1
                        arginine catabolic process to ornithine 2
                        arginine catabolic process to proline + 1
                        arginine catabolic process to spermine 0
                        arginine catabolic process to succinate 0
                        arginine deiminase pathway 1
                        negative regulation of arginine catabolic process + 1
                        regulation of arginine catabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.