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ONTOLOGY REPORT - ANNOTATIONS


Term:tryptophan catabolic process
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Accession:GO:0006569 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
Synonyms:exact_synonym: tryptophan breakdown;   tryptophan catabolism;   tryptophan degradation
 narrow_synonym: tryptophan catabolic process, using tryptophanase;   tryptophan catabolism, using tryptophanase
 xref: MIPS_funcat:01.01.09.06.02


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tryptophan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd aminocarboxymuconate semialdehyde decarboxylase JBrowse link 13 44,424,689 44,468,734 RGD:70243
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:1600115
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1624291
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:2303721
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2303721
RGD:13792537
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1624291
RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:2290190
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2290543
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:1600115
RGD:13792537
RGD:1624291
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:13792537
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19335
    metabolic process 11555
      primary metabolic process 10411
        cellular amino acid metabolic process 266
          aromatic amino acid family metabolic process 33
            tryptophan metabolic process 11
              tryptophan catabolic process 8
                tryptophan catabolic process to acetyl-CoA 2
                tryptophan catabolic process to catechol 0
                tryptophan catabolic process to indole-3-acetate 0
                tryptophan catabolic process to kynurenine 5
Path 2
Term Annotations click to browse term
  biological_process 19335
    metabolic process 11555
      nitrogen compound metabolic process 9892
        organonitrogen compound metabolic process 6852
          amine metabolic process 93
            cellular amine metabolic process 84
              cellular biogenic amine metabolic process 47
                indolalkylamine metabolic process 11
                  tryptophan metabolic process 11
                    tryptophan catabolic process 8
                      tryptophan catabolic process to acetyl-CoA 2
                      tryptophan catabolic process to catechol 0
                      tryptophan catabolic process to indole-3-acetate 0
                      tryptophan catabolic process to kynurenine 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.