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ONTOLOGY REPORT - ANNOTATIONS


Term:amino-acid betaine biosynthetic process
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Accession:GO:0006578 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.
Synonyms:exact_synonym: betaine anabolism;   betaine biosynthesis;   betaine biosynthetic process;   betaine formation;   betaine synthesis


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carnitine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain ISO (PMID:16972171) BHF-UCL PMID:16972171 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840
JBrowse link
G BBOX1 gamma-butyrobetaine hydroxylase 1 ISO (PMID:20599753), (PMID:9753662) UniProtKB PMID:9753662, PMID:20599753 NCBI chr11:26,995,120...27,083,832
Ensembl chr11:26,898,529...26,986,705
JBrowse link
G TMLHE trimethyllysine hydroxylase, epsilon ISO (PMID:15754339)
(MGI:MGI:2183690|PMID:12121276)
(PMID:23092983)
BHF-UCL
MGI
UniProtKB
PMID:12121276, PMID:15754339, PMID:23092983 MGI:MGI:2183690 NCBI chr  X:144,956,906...145,081,204 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12529
    metabolic process 7962
      cellular metabolic process 7310
        cellular modified amino acid metabolic process 133
          amino-acid betaine metabolic process 15
            amino-acid betaine biosynthetic process 3
              N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
              carnitine biosynthetic process 3
              ergothioneine biosynthetic process + 0
              glycine betaine biosynthetic process + 0
              selenoneine biosynthetic process 0
              stachydrine biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 12529
    metabolic process 7962
      biosynthetic process 4016
        organic substance biosynthetic process 3934
          organonitrogen compound biosynthetic process 1035
            cellular modified amino acid biosynthetic process 29
              amino-acid betaine biosynthetic process 3
                N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
                carnitine biosynthetic process 3
                ergothioneine biosynthetic process + 0
                glycine betaine biosynthetic process + 0
                selenoneine biosynthetic process 0
                stachydrine biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.