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ONTOLOGY REPORT - ANNOTATIONS


Term:amino-acid betaine biosynthetic process
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Accession:GO:0006578 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.
Synonyms:exact_synonym: betaine anabolism;   betaine biosynthesis;   betaine biosynthetic process;   betaine formation;   betaine synthesis


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carnitine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain ISO (PMID:16972171) BHF-UCL PMID:16972171 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 IEA UniProt GO_REF:0000041 NCBI chr 4:85,029,914...85,057,650 JBrowse link
G BBOX1 gamma-butyrobetaine hydroxylase 1 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 2:33,227,965...33,296,013
Ensembl chr 2:33,227,974...33,296,559
JBrowse link
G TMLHE trimethyllysine hydroxylase, epsilon IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr  X:125,601,920...125,673,716
Ensembl chr  X:125,598,105...125,673,680
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    metabolic process 10565
      cellular metabolic process 9560
        cellular modified amino acid metabolic process 159
          amino-acid betaine metabolic process 16
            amino-acid betaine biosynthetic process 4
              N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
              carnitine biosynthetic process 4
              ergothioneine biosynthetic process + 0
              glycine betaine biosynthetic process + 0
              selenoneine biosynthetic process 0
              stachydrine biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 16524
    metabolic process 10565
      biosynthetic process 5284
        organic substance biosynthetic process 5186
          organonitrogen compound biosynthetic process 1488
            cellular modified amino acid biosynthetic process 34
              amino-acid betaine biosynthetic process 4
                N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
                carnitine biosynthetic process 4
                ergothioneine biosynthetic process + 0
                glycine betaine biosynthetic process + 0
                selenoneine biosynthetic process 0
                stachydrine biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.