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ONTOLOGY REPORT - ANNOTATIONS


Term:amino-acid betaine biosynthetic process
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Accession:GO:0006578 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.
Synonyms:exact_synonym: betaine anabolism;   betaine biosynthesis;   betaine biosynthetic process;   betaine formation;   betaine synthesis


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carnitine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain ISO (PMID:16972171) BHF-UCL PMID:16972171 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Bbox1 gamma-butyrobetaine hydroxylase 1 ISO (PMID:20599753), (PMID:9753662) UniProtKB PMID:9753662, PMID:20599753 NCBI chrNW_004936540:6,048,481...6,113,627 JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon ISO (MGI:MGI:2183690|PMID:12121276)
(PMID:15754339)
(PMID:23092983)
MGI
BHF-UCL
UniProtKB
PMID:12121276, PMID:15754339, PMID:23092983 MGI:MGI:2183690 NCBI chrNW_004936958:64,713...113,627 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11968
    metabolic process 7653
      cellular metabolic process 7051
        cellular modified amino acid metabolic process 127
          amino-acid betaine metabolic process 15
            amino-acid betaine biosynthetic process 3
              N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
              carnitine biosynthetic process 3
              ergothioneine biosynthetic process + 0
              glycine betaine biosynthetic process + 0
              selenoneine biosynthetic process 0
              stachydrine biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 11968
    metabolic process 7653
      biosynthetic process 3901
        organic substance biosynthetic process 3823
          organonitrogen compound biosynthetic process 1013
            cellular modified amino acid biosynthetic process 29
              amino-acid betaine biosynthetic process 3
                N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process + 0
                carnitine biosynthetic process 3
                ergothioneine biosynthetic process + 0
                glycine betaine biosynthetic process + 0
                selenoneine biosynthetic process 0
                stachydrine biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.