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ONTOLOGY REPORT - ANNOTATIONS


Term:ornithine metabolic process
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Accession:GO:0006591 term browser browse the term
Definition:The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.
Synonyms:exact_synonym: ornithine metabolism


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ornithine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:1624291
RGD:1600115
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624291
RGD:1600115
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:1358311
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:2300098
arginine biosynthetic process via ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:1600115
RGD:13792537
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:13792537
arginine catabolic process to ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:8693655
RGD:13792537
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:1358311
RGD:13792537
RGD:8693655
ornithine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 JBrowse link 1 259,641,673 259,674,521 RGD:1624291
ornithine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:1624291
putrescine biosynthetic process from ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:13792537
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:13792537
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
RGD:13792537
RGD:1624291
G RGD1562036 similar to ornithine decarboxylase JBrowse link 5 148,432,213 148,444,188 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      primary metabolic process 10411
        cellular amino acid metabolic process 266
          alpha-amino acid metabolic process 192
            ornithine metabolic process 11
              D-ornithine metabolic process 0
              L-alanine biosynthetic process via ornithine 0
              arginine biosynthetic process via ornithine + 2
              arginine catabolic process to ornithine 2
              glutamate catabolic process to ornithine 0
              ornithine biosynthetic process 1
              ornithine catabolic process + 1
              putrescine biosynthetic process from ornithine 4
              regulation of ornithine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      cellular metabolic process 10567
        organic acid metabolic process 1030
          oxoacid metabolic process 1004
            carboxylic acid metabolic process 959
              cellular amino acid metabolic process 266
                alpha-amino acid metabolic process 192
                  ornithine metabolic process 11
                    D-ornithine metabolic process 0
                    L-alanine biosynthetic process via ornithine 0
                    arginine biosynthetic process via ornithine + 2
                    arginine catabolic process to ornithine 2
                    glutamate catabolic process to ornithine 0
                    ornithine biosynthetic process 1
                    ornithine catabolic process + 1
                    putrescine biosynthetic process from ornithine 4
                    regulation of ornithine metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.