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ONTOLOGY REPORT - ANNOTATIONS


Term:polyamine biosynthetic process
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Accession:GO:0006596 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.
Synonyms:exact_synonym: polyamine anabolism;   polyamine biosynthesis;   polyamine formation;   polyamine synthesis
 xref: MIPS_funcat:01.01.05.01.01;   MetaCyc:POLYAMSYN-PWY


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polyamine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:1600115
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:1600115
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Oaz1 ornithine decarboxylase antizyme 1 JBrowse link 7 11,752,127 11,754,587 RGD:1600115
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:13792537
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1578320
RGD:7242912
G Paox polyamine oxidase JBrowse link 1 212,578,444 212,603,722 RGD:1624291
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:13792537
putrescine biosynthetic process from ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin1 antizyme inhibitor 1 JBrowse link 7 77,345,646 77,372,398 RGD:13792537
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:13792537
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:1600115
RGD:13792537
RGD:1624291
G RGD1562036 similar to ornithine decarboxylase JBrowse link 5 148,432,213 148,444,188 RGD:13792537
spermidine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agmat agmatinase JBrowse link 5 160,306,754 160,321,951 RGD:1600115
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G LOC100912604 spermidine synthase-like JBrowse link 3 14,588,818 14,591,980 RGD:13792537
G Srm spermidine synthase JBrowse link 5 165,405,168 165,408,325 RGD:1359042
RGD:13792537
RGD:1624291
RGD:7242928
RGD:7242920
spermine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:1578320
RGD:1624291
RGD:13792537
RGD:7242912
RGD:7242911
G Sms spermine synthase JBrowse link X 40,363,646 40,415,110 RGD:7242928
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18157
    metabolic process 10837
      nitrogen compound metabolic process 9238
        organonitrogen compound metabolic process 6413
          amine metabolic process 90
            amine biosynthetic process 16
              cellular biogenic amine biosynthetic process 16
                polyamine biosynthetic process 11
                  nor-spermidine biosynthetic process 0
                  putrescine biosynthetic process + 6
                  regulation of polyamine biosynthetic process + 1
                  spermidine biosynthetic process + 5
                  spermine biosynthetic process 2
                  thermospermine biosynthetic process 0
                  trimethylenediamine biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 18157
    metabolic process 10837
      nitrogen compound metabolic process 9238
        organonitrogen compound metabolic process 6413
          amine metabolic process 90
            cellular amine metabolic process 82
              cellular biogenic amine metabolic process 47
                polyamine metabolic process 19
                  polyamine biosynthetic process 11
                    nor-spermidine biosynthetic process 0
                    putrescine biosynthetic process + 6
                    regulation of polyamine biosynthetic process + 1
                    spermidine biosynthetic process + 5
                    spermine biosynthetic process 2
                    thermospermine biosynthetic process 0
                    trimethylenediamine biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.