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ONTOLOGY REPORT - ANNOTATIONS


Term:protein targeting to vacuole
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Accession:GO:0006623 term browser browse the term
Definition:The process of directing proteins towards the vacuole, usually using signals contained within the protein.
Synonyms:exact_synonym: protein vacuolar targeting;   protein-vacuole targeting;   vacuolar protein sorting


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protein targeting to vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07006458.1 RGD:13792537
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:13792537
G Gosr2 golgi SNAP receptor complex member 2 JBrowse link 10 91,735,772 91,756,123 RGD:13792537
G Mon1a MON1 homolog A, secretory trafficking associated JBrowse link 8 116,657,345 116,682,172 RGD:1600115
G Mon1b MON1 homolog B, secretory trafficking associated JBrowse link 19 45,938,433 45,946,647 RGD:1600115
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 JBrowse link 8 114,300,248 114,350,686 RGD:13792537
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:13792537
G Vps13d vacuolar protein sorting 13 homolog D JBrowse link 5 162,891,451 163,119,239 RGD:13792537
G Vps37a VPS37A subunit of ESCRT-I JBrowse link 16 54,860,811 54,899,410 RGD:13792537
G Vps37b VPS37B subunit of ESCRT-I JBrowse link 12 37,984,790 38,023,369 RGD:13792537
G Vps37c VPS37C subunit of ESCRT-I JBrowse link 1 226,742,267 226,774,109 RGD:13792537
G Vps37d VPS37D subunit of ESCRT-I JBrowse link 12 24,651,342 24,656,793 RGD:13792537
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:13792537
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:13792537
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:13792537
cytoplasm to vacuole transport by the Cvt pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:13792537
G Becn2 beclin 2 JBrowse link 13 93,971,720 93,974,467 RGD:13792537
G Trappc8 trafficking protein particle complex 8 JBrowse link 18 15,298,673 15,375,034 RGD:13792537
N-glycan processing to lysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta JBrowse link 7 28,956,363 29,023,232 RGD:1624291
RGD:13792537
protein targeting to lysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1624291
RGD:1600115
G Ap4m1 adaptor related protein complex 4 subunit mu 1 JBrowse link 12 19,314,222 19,320,339 RGD:1624291
G Gcc2 GRIP and coiled-coil domain containing 2 JBrowse link 20 27,832,960 27,879,764 RGD:1600115
RGD:13792537
RGD:1624291
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate JBrowse link 10 109,638,944 109,657,460 RGD:1600115
RGD:1624291
G Lars1 leucyl-tRNA synthetase 1 JBrowse link 18 36,524,013 36,579,471 RGD:1624291
RGD:1600115
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:2292601
G LOC100909548 cation-dependent mannose-6-phosphate receptor-like JBrowse link X 88,312,689 88,321,836 RGD:13792537
G M6pr mannose-6-phosphate receptor, cation dependent JBrowse link 4 155,084,755 155,093,896 RGD:13792537
G Ncoa4 nuclear receptor coactivator 4 JBrowse link 16 8,302,950 8,323,294 RGD:1624291
RGD:1600115
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:1600115
RGD:13792537
RGD:1624291
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
G Scarb2 scavenger receptor class B, member 2 JBrowse link 14 17,064,173 17,115,620 RGD:1624291
RGD:1600115
G Snx16 sorting nexin 16 JBrowse link 2 93,518,796 93,541,056 RGD:1600115
RGD:13792537
RGD:1624291
G Sorl1 sortilin related receptor 1 JBrowse link 8 46,228,077 46,287,171 RGD:1624291
G Sort1 sortilin 1 JBrowse link 2 211,078,092 211,156,312 RGD:1600115
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
G Zfyve16 zinc finger FYVE-type containing 16 JBrowse link 2 22,060,879 22,105,822 RGD:1624291
RGD:13792537
protein targeting to lysosome involved in chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07011951.1 RGD:13792537
G AABR07033324.1 RGD:13792537
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1624291
RGD:13792537
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:10412301
RGD:13792537
RGD:1600115
RGD:1624291
G LOC680121 similar to heat shock protein 8 JBrowse link 11 13,499,168 13,501,271 RGD:13792537
protein targeting to vacuole involved in autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 12 11,433,815 11,526,465 RGD:1624291
RGD:1600115
regulation of protein targeting to vacuolar membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19317
    localization 6317
      establishment of localization 4859
        transport 4720
          vacuolar transport 144
            protein targeting to vacuole 43
              cytoplasm to vacuole transport by the Cvt pathway + 3
              cytoplasm to vacuole transport by the NVT pathway 0
              protein targeting to lysosome + 23
              protein targeting to vacuolar membrane + 1
              protein targeting to vacuole involved in autophagy + 6
Path 2
Term Annotations click to browse term
  biological_process 19317
    localization 6317
      establishment of localization 4859
        transport 4720
          nitrogen compound transport 2241
            amide transport 1921
              peptide transport 1889
                protein transport 1831
                  intracellular protein transport 988
                    protein targeting 289
                      protein targeting to vacuole 43
                        cytoplasm to vacuole transport by the Cvt pathway + 3
                        cytoplasm to vacuole transport by the NVT pathway 0
                        protein targeting to lysosome + 23
                        protein targeting to vacuolar membrane + 1
                        protein targeting to vacuole involved in autophagy + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.