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ONTOLOGY REPORT - ANNOTATIONS


Term:fatty acid biosynthetic process
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Accession:GO:0006633 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
Synonyms:exact_synonym: fatty acid anabolism;   fatty acid biosynthesis;   fatty acid formation;   fatty acid synthesis
 alt_id: GO:0000037
 xref: MetaCyc:FASYN-INITIAL-PWY;   MetaCyc:PWY-4381;   MetaCyc:PWY-5156;   Wikipedia:Fatty_acid_synthesis


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fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link 2 225,335,708 225,389,120 RGD:1624291
RGD:1600115
G Acaca acetyl-CoA carboxylase alpha JBrowse link 10 71,519,392 71,719,910 RGD:2317316
RGD:1624291
RGD:1600115
G Acacb acetyl-CoA carboxylase beta JBrowse link 12 48,127,149 48,238,969 RGD:1624291
G Acly ATP citrate lyase JBrowse link 10 88,392,248 88,442,845 RGD:2317316
RGD:13792537
G Acsf3 acyl-CoA synthetase family member 3 JBrowse link 19 55,594,801 55,635,312 RGD:1624291
RGD:13792537
G Acsl3 acyl-CoA synthetase long-chain family member 3 JBrowse link 9 84,569,601 84,593,565 RGD:70280
G Acsm1 acyl-CoA synthetase medium-chain family member 1 JBrowse link 1 189,359,374 189,395,277 RGD:1624291
G Acsm2 acyl-CoA synthetase medium-chain family member 2 JBrowse link 1 189,289,957 189,329,007 RGD:13792537
G Acsm3 acyl-CoA synthetase medium-chain family member 3 JBrowse link 1 189,514,504 189,541,233 RGD:1624291
RGD:13792537
G Acsm4 acyl-CoA synthetase medium-chain family member 4 JBrowse link 1 189,432,604 189,458,799 RGD:13792537
G Acsm5 acyl-CoA synthetase medium-chain family member 5 JBrowse link 1 189,240,955 189,270,422 RGD:13792537
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:1600115
G Cbr4 carbonyl reductase 4 JBrowse link 16 31,944,328 31,972,553 RGD:1600115
RGD:13792537
RGD:1624291
G Degs1 delta(4)-desaturase, sphingolipid 1 JBrowse link 13 100,665,265 100,672,731 RGD:1600115
G Fa2h fatty acid 2-hydroxylase JBrowse link 19 43,545,380 43,596,788 RGD:1600115
G Fasn fatty acid synthase JBrowse link 10 109,987,735 110,005,901 RGD:2317317
RGD:1624291
G Hnf1a HNF1 homeobox A JBrowse link 12 47,407,811 47,433,342 RGD:1624291
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 JBrowse link 3 82,924,699 83,048,465 RGD:1600115
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 JBrowse link 20 3,817,212 3,819,316 RGD:1600115
RGD:13792537
RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:1624291
RGD:1600115
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1624291
G Mcat malonyl-CoA-acyl carrier protein transacylase JBrowse link 7 124,412,762 124,424,966 RGD:1624291
RGD:13792537
G Mecr mitochondrial trans-2-enoyl-CoA reductase JBrowse link 5 150,001,281 150,027,407 RGD:1600115
G Mgll monoglyceride lipase JBrowse link 4 120,671,436 120,773,458 RGD:1600115
G Mlycd malonyl-CoA decarboxylase JBrowse link 19 52,032,950 52,048,773 RGD:1600796
RGD:1624291
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 JBrowse link 1 192,044,209 192,057,644 RGD:1600115
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial JBrowse link 15 10,462,380 10,466,496 RGD:13792537
G Pecr peroxisomal trans-2-enoyl-CoA reductase JBrowse link 9 79,601,937 79,630,547 RGD:1600115
G Pla2g1b phospholipase A2 group IB JBrowse link 12 46,879,346 46,890,234 RGD:1624291
RGD:13792537
RGD:8553780
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:1600115
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 5 124,568,845 124,642,569 RGD:1600115
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 JBrowse link 12 46,316,298 46,326,789 RGD:1600115
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 JBrowse link 2 199,831,990 199,847,623 RGD:1600115
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 JBrowse link 7 140,489,499 140,506,925 RGD:1600115
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:1304415
RGD:1624291
G Scd2 stearoyl-Coenzyme A desaturase 2 JBrowse link 1 264,059,374 264,072,433 RGD:1580018
G Scd4 stearoyl-coenzyme A desaturase 4 JBrowse link 1 264,094,007 264,105,473 RGD:1624291
2-oxobutyrate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Thnsl2 threonine synthase-like 2 JBrowse link 4 98,976,559 98,997,187 RGD:1624291
RGD:13792537
cyclooxygenase pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdkrb1 bradykinin receptor B1 JBrowse link 6 129,437,423 129,441,553 RGD:1624291
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:1624291
RGD:1600115
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:1600115
RGD:1624291
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:2311353
fatty acid elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:1624291
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 JBrowse link 17 81,173,238 81,196,012 RGD:1624291
RGD:13792537
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 JBrowse link 11 68,893,684 68,985,635 RGD:1624291
RGD:13792537
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 8 70,471,572 70,509,874 RGD:1624291
RGD:13792537
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 JBrowse link 5 106,728,401 106,758,068 RGD:1624291
RGD:13792537
G Tecr trans-2,3-enoyl-CoA reductase JBrowse link 19 24,705,478 24,732,024 RGD:1624291
RGD:1600115
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:1624291
RGD:13792537
G Elovl2 ELOVL fatty acid elongase 2 JBrowse link 17 21,382,461 21,422,413 RGD:13792537
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1624291
RGD:13792537
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:13792537
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:1624291
RGD:13792537
RGD:1600115
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:8554529
RGD:13792537
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:13792537
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:8554529
RGD:13792537
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:13792537
G Elovl2 ELOVL fatty acid elongase 2 JBrowse link 17 21,382,461 21,422,413 RGD:1624291
RGD:13792537
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1624291
RGD:13792537
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:13792537
RGD:1624291
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:8554529
RGD:13792537
RGD:1624291
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:13792537
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:1624291
RGD:1600115
RGD:13792537
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:13792537
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:1624291
RGD:13792537
G Elovl2 ELOVL fatty acid elongase 2 JBrowse link 17 21,382,461 21,422,413 RGD:13792537
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1624291
RGD:13792537
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:1624291
RGD:13792537
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:13792537
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:8554529
RGD:1624291
RGD:13792537
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:1624291
RGD:1600115
RGD:13792537
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:8554529
RGD:13792537
hepoxilin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox12 arachidonate 12-lipoxygenase, 12S type JBrowse link 10 56,851,734 56,864,049 RGD:8554649
RGD:13792537
G Alox12b arachidonate 12-lipoxygenase, 12R type JBrowse link 10 55,744,646 55,756,524 RGD:8554649
RGD:13792537
G Alox12e arachidonate 12-lipoxygenase, epidermal JBrowse link 10 56,927,676 56,935,141 RGD:13792537
G Alox15 arachidonate 15-lipoxygenase JBrowse link 10 56,953,692 56,962,145 RGD:5509794
RGD:13792537
RGD:8554649
G Alox15b arachidonate 15-lipoxygenase, type B JBrowse link 10 55,773,748 55,783,489 RGD:8554649
RGD:13792537
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:13792537
G Aloxe3 arachidonate lipoxygenase 3 JBrowse link 10 55,711,996 55,735,915 RGD:8554649
RGD:13792537
RGD:1624291
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:1600115
RGD:1624291
G Gstm2 glutathione S-transferase mu 2 JBrowse link 2 210,778,041 210,782,807 RGD:1600115
RGD:1624291
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:1600115
RGD:1624291
leukotriene A4 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:1624291
RGD:1600115
lipoate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lias lipoic acid synthetase JBrowse link 14 44,507,217 44,524,287 RGD:1624291
RGD:13792537
lipoxin A4 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox12 arachidonate 12-lipoxygenase, 12S type JBrowse link 10 56,851,734 56,864,049 RGD:1624291
RGD:1600115
G Alox15 arachidonate 15-lipoxygenase JBrowse link 10 56,953,692 56,962,145 RGD:1624291
RGD:1600115
G Alox15b arachidonate 15-lipoxygenase, type B JBrowse link 10 55,773,748 55,783,489 RGD:1600115
RGD:1624291
lipoxin B4 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox12 arachidonate 12-lipoxygenase, 12S type JBrowse link 10 56,851,734 56,864,049 RGD:1624291
RGD:1600115
lipoxin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:1600115
RGD:1624291
long-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 JBrowse link 8 59,184,111 59,240,133 RGD:68727
RGD:13792537
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 JBrowse link 9 10,172,317 10,203,550 RGD:13792537
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:13792537
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:1624291
RGD:1600115
G Fads1 fatty acid desaturase 1 JBrowse link 1 226,234,034 226,249,118 RGD:1624291
G Gstm4 glutathione S-transferase mu 4 JBrowse link 2 210,834,013 210,839,242 RGD:1600115
RGD:1624291
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:1600115
G LOC108348175 protein quaking-like JBrowse link 1 50,828,585 50,936,459 RGD:1600115
G LOC316124 similar to gonadotropin-regulated long chain acyl-CoA synthetase JBrowse link 9 10,158,745 10,188,013 RGD:13792537
G Ltc4s leukotriene C4 synthase JBrowse link 10 35,736,486 35,743,088 RGD:1600115
RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
RGD:1600115
G Plp1 proteolipid protein 1 JBrowse link X 107,494,326 107,511,355 RGD:1624291
G Qk quaking JBrowse link 1 50,983,647 51,050,692 RGD:1624291
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
G Olah oleoyl-ACP hydrolase JBrowse link 17 78,878,673 78,903,919 RGD:13524614
RGD:1624291
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial JBrowse link 15 10,462,380 10,466,496 RGD:1624291
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC681458 similar to stearoyl-coenzyme A desaturase 3 JBrowse link 1 263,968,156 264,003,991 RGD:1600115
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:1624291
G Scd2 stearoyl-Coenzyme A desaturase 2 JBrowse link 1 264,059,374 264,072,433 RGD:1624291
RGD:1600115
G Scd4 stearoyl-coenzyme A desaturase 4 JBrowse link 1 264,094,007 264,105,473 RGD:1624291
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:1624291
G Acadvl acyl-CoA dehydrogenase, very long chain JBrowse link 10 56,619,321 56,624,468 RGD:1624291
RGD:1600115
G Apoc1 apolipoprotein C1 JBrowse link 1 80,606,638 80,609,921 RGD:1624291
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1600115
RGD:1624291
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:1600115
RGD:13792537
RGD:1624291
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link 1 82,327,955 82,344,345 RGD:11059593
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 JBrowse link 5 19,358,734 19,368,431 RGD:13792517
G Erlin1 ER lipid raft associated 1 JBrowse link 1 263,810,439 263,845,762 RGD:1624291
G Erlin2 ER lipid raft associated 2 JBrowse link 16 69,179,005 69,195,452 RGD:1624291
G Insig1 insulin induced gene 1 JBrowse link 4 342,302 350,515 RGD:1624291
G Insig2 insulin induced gene 2 JBrowse link 13 37,264,818 37,292,718 RGD:1624291
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:1624291
G Wdtc1 WD and tetratricopeptide repeats 1 JBrowse link 5 151,487,572 151,536,829 RGD:1624291
RGD:13792537
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pibf1 progesterone immunomodulatory binding factor 1 JBrowse link 15 83,494,110 83,663,202 RGD:1624291
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
palmitic acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
RGD:13792537
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:13792537
RGD:1600115
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1624291
RGD:13792537
RGD:1600115
G Apoc2 apolipoprotein C2 JBrowse link 1 80,589,023 80,593,991 RGD:1624291
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:1624291
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624995
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 JBrowse link 13 110,397,353 110,470,874 RGD:1624291
G Mid1ip1 MID1 interacting protein 1 JBrowse link X 13,114,557 13,119,274 RGD:1624291
RGD:1600115
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:1624291
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:1624291
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:9590221
G Slc45a3 solute carrier family 45, member 3 JBrowse link 13 48,745,855 48,766,283 RGD:1624291
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:2306959
RGD:13792537
G Avp arginine vasopressin JBrowse link 3 123,117,482 123,119,460 RGD:2300349
G Avpr1a arginine vasopressin receptor 1A JBrowse link 7 67,341,366 67,345,290 RGD:2300349
G Cd74 CD74 molecule JBrowse link 18 56,071,420 56,080,851 RGD:1624291
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1600115
RGD:1624291
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 10 35,333,859 35,374,364 RGD:2304243
G Pla2g4a phospholipase A2 group IVA JBrowse link 13 67,062,252 67,206,688 RGD:1642461
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:1624291
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link 7 132,294,564 132,343,169 RGD:1624291
RGD:1600115
propionate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acss1 acyl-CoA synthetase short-chain family member 1 JBrowse link 3 146,420,346 146,470,293 RGD:2317572
G Acss2 acyl-CoA synthetase short-chain family member 2 JBrowse link 3 151,032,925 151,075,856 RGD:2317572
prostaglandin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07034131.1 RGD:13792537
G AABR07054614.1 RGD:1600115
G Cd74 CD74 molecule JBrowse link 18 56,071,420 56,080,851 RGD:1624291
RGD:1600115
G Daglb diacylglycerol lipase, beta JBrowse link 12 13,113,073 13,157,748 RGD:1600115
RGD:1624291
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:1624291
G Edn2 endothelin 2 JBrowse link 5 139,098,472 139,106,396 RGD:1624291
RGD:1600115
G Hpgds hematopoietic prostaglandin D synthase JBrowse link 4 95,945,356 95,970,666 RGD:68838
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1624291
G Pla2g4a phospholipase A2 group IVA JBrowse link 13 67,062,252 67,206,688 RGD:1624291
RGD:1600115
G Pla2g4f phospholipase A2, group IVF JBrowse link 3 112,068,617 112,083,978 RGD:1624291
G Pnpla8 patatin-like phospholipase domain containing 8 JBrowse link 6 64,224,870 64,288,465 RGD:1624291
G Prxl2b peroxiredoxin like 2B JBrowse link 5 172,304,799 172,307,402 RGD:1624291
RGD:8552775
RGD:1600115
G Ptgds prostaglandin D2 synthase JBrowse link 3 2,686,125 2,689,059 RGD:8553429
RGD:1624291
G Ptges prostaglandin E synthase JBrowse link 3 9,727,408 9,738,752 RGD:67929
RGD:13792537
RGD:1624291
G Ptges3 prostaglandin E synthase 3 JBrowse link 7 2,479,267 2,497,024 RGD:5688071
RGD:13792537
RGD:1600115
RGD:1624291
G Ptges3l1 prostaglandin E synthase 3-like 1 JBrowse link X 45,410,545 45,419,817 RGD:13792537
G Ptgis prostaglandin I2 synthase JBrowse link 3 163,950,746 163,986,129 RGD:727270
RGD:1624291
RGD:13792537
RGD:1600115
RGD:8693629
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:2300259
RGD:1600115
RGD:1624291
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:2300259
RGD:1624291
G Tbxas1 thromboxane A synthase 1 JBrowse link 4 66,624,181 66,846,745 RGD:1624291
regulation of fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 3 151,356,867 151,363,201 RGD:1600115
RGD:1624291
G Gip gastric inhibitory polypeptide JBrowse link 10 83,835,080 83,848,399 RGD:1600115
G Pdk4 pyruvate dehydrogenase kinase 4 JBrowse link 4 30,546,772 30,556,774 RGD:1600115
RGD:1624291
G Scap SREBF chaperone JBrowse link 8 118,551,869 118,628,650 RGD:1624291
regulation of prostaglandin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fabp5 fatty acid binding protein 5 JBrowse link 2 93,981,662 93,985,322 RGD:1624291
short-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial JBrowse link 15 10,462,380 10,466,496 RGD:1624291
unsaturated fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Decr2 2,4-dienoyl-CoA reductase 2 JBrowse link 10 15,451,850 15,460,227 RGD:1624291
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:1600115
G Elovl2 ELOVL fatty acid elongase 2 JBrowse link 17 21,382,461 21,422,413 RGD:1600115
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1600115
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:1600115
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:1600115
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:1600115
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:1600115
G Fads1 fatty acid desaturase 1 JBrowse link 1 226,234,034 226,249,118 RGD:632758
RGD:1624291
RGD:1600115
G Fads2 fatty acid desaturase 2 JBrowse link 1 225,906,582 226,152,568 RGD:1600115
G Fads3 fatty acid desaturase 3 JBrowse link 1 226,091,774 226,108,332 RGD:1600115
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:1600115
G LOC681458 similar to stearoyl-coenzyme A desaturase 3 JBrowse link 1 263,968,156 264,003,991 RGD:13792537
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:10054074
RGD:13792537
RGD:1624291
RGD:10054069
G Scd2 stearoyl-Coenzyme A desaturase 2 JBrowse link 1 264,059,374 264,072,433 RGD:13792537
G Scd4 stearoyl-coenzyme A desaturase 4 JBrowse link 1 264,094,007 264,105,473 RGD:13792537
very long-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:1624291
RGD:13792537
G Elovl2 ELOVL fatty acid elongase 2 JBrowse link 17 21,382,461 21,422,413 RGD:1624291
RGD:13792537
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1624291
RGD:13792537
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:1624291
RGD:13792537
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:8554529
RGD:13792537
RGD:1624291
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:13792537
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:1624291
RGD:1600115
RGD:13792537
G Fads2 fatty acid desaturase 2 JBrowse link 1 225,906,582 226,152,568 RGD:70542
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 JBrowse link 17 81,173,238 81,196,012 RGD:1624291
RGD:13792537
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 JBrowse link 11 68,893,684 68,985,635 RGD:1624291
RGD:13792537
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 8 70,471,572 70,509,874 RGD:1624291
RGD:13792537
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 JBrowse link 5 106,728,401 106,758,068 RGD:1624291
RGD:13792537
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:13792537
G Tecr trans-2,3-enoyl-CoA reductase JBrowse link 19 24,705,478 24,732,024 RGD:1600115
RGD:1624291
RGD:13792537
G Tecrl trans-2,3-enoyl-CoA reductase-like JBrowse link 14 26,662,851 26,735,878 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      biosynthetic process 5967
        organic substance biosynthetic process 5872
          lipid biosynthetic process 590
            fatty acid biosynthetic process 144
              butyryl-CoA biosynthetic process + 0
              fatty acid elongation + 14
              lipoate biosynthetic process 1
              long-chain fatty acid biosynthetic process + 24
              medium-chain fatty acid biosynthetic process 3
              methionine catabolic process to 3-methylthiopropanoate 0
              methyl-branched fatty acid biosynthetic process + 0
              mycolic acid biosynthetic process 0
              negative regulation of fatty acid biosynthetic process + 15
              oxylipin biosynthetic process + 1
              positive regulation of fatty acid biosynthetic process + 25
              regulation of fatty acid biosynthetic process + 45
              short-chain fatty acid biosynthetic process + 4
              unsaturated fatty acid biosynthetic process + 58
              very long-chain fatty acid biosynthetic process 15
Path 2
Term Annotations click to browse term
  biological_process 19578
    metabolic process 11901
      cellular metabolic process 10737
        organic acid metabolic process 1053
          oxoacid metabolic process 1026
            carboxylic acid metabolic process 979
              monocarboxylic acid metabolic process 642
                fatty acid metabolic process 408
                  fatty acid biosynthetic process 144
                    butyryl-CoA biosynthetic process + 0
                    fatty acid elongation + 14
                    lipoate biosynthetic process 1
                    long-chain fatty acid biosynthetic process + 24
                    medium-chain fatty acid biosynthetic process 3
                    methionine catabolic process to 3-methylthiopropanoate 0
                    methyl-branched fatty acid biosynthetic process + 0
                    mycolic acid biosynthetic process 0
                    negative regulation of fatty acid biosynthetic process + 15
                    oxylipin biosynthetic process + 1
                    positive regulation of fatty acid biosynthetic process + 25
                    regulation of fatty acid biosynthetic process + 45
                    short-chain fatty acid biosynthetic process + 4
                    unsaturated fatty acid biosynthetic process + 58
                    very long-chain fatty acid biosynthetic process 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.