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ONTOLOGY REPORT - ANNOTATIONS


Term:sphingosine metabolic process
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Accession:GO:0006670 term browser browse the term
Definition:The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.
Synonyms:exact_synonym: (4E)-sphing-4-enine metabolic process;   (4E)-sphing-4-enine metabolism;   sphing-4-enine metabolic process;   sphing-4-enine metabolism;   sphingosine metabolism


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sphingosine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:1600115
RGD:1624291
G Sgpp1 sphingosine-1-phosphate phosphatase 1 JBrowse link 6 98,675,324 98,696,492 RGD:1624291
G Sgpp2 sphingosine-1-phosphate phosphatase 2 JBrowse link 9 84,203,094 84,321,269 RGD:1624291
RGD:1600115
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1624291
RGD:1600115
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
sphingosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
RGD:1600115
G Acer1 alkaline ceramidase 1 JBrowse link 9 10,061,978 10,093,588 RGD:1600115
RGD:1624291
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:1600115
RGD:1624291
G Acer3 alkaline ceramidase 3 JBrowse link 1 163,160,987 163,263,621 RGD:1600115
RGD:1624291
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:1600115
RGD:1624291
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:13838800
RGD:13792537
RGD:1624291
RGD:13838794
RGD:13838793
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
RGD:1600115
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1624291
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
RGD:1600115
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 JBrowse link 17 11,856,525 11,895,566 RGD:1624291
RGD:1600115
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19317
    metabolic process 11540
      nitrogen compound metabolic process 9888
        ammonium ion metabolic process 183
          sphingoid metabolic process 16
            sphingosine metabolic process 13
              sphingosine biosynthetic process 11
              sphingosine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19317
    metabolic process 11540
      primary metabolic process 10404
        lipid metabolic process 1295
          cellular lipid metabolic process 981
            membrane lipid metabolic process 178
              sphingolipid metabolic process 130
                sphingoid metabolic process 16
                  sphingosine metabolic process 13
                    sphingosine biosynthetic process 11
                    sphingosine catabolic process 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.