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ONTOLOGY REPORT - ANNOTATIONS


Term:one-carbon metabolic process
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Accession:GO:0006730 term browser browse the term
Definition:The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.
Synonyms:exact_synonym: one carbon metabolism;   one-carbon transfer metabolic process;   one-carbon transfer metabolism
 alt_id: GO:0019753;   GO:0019754
 xref: MIPS_funcat:01.05;   UM-BBD_pathwayID:C1cyc


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one-carbon metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:1600115
G Ahcyl1 adenosylhomocysteinase-like 1 JBrowse link 2 210,438,884 210,474,350 RGD:1600115
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 JBrowse link 4 123,516,553 123,564,067 RGD:1600115
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 JBrowse link 7 26,375,866 26,425,838 RGD:1600115
G Ca6 carbonic anhydrase 6 JBrowse link 5 167,226,246 167,244,786 RGD:1600115
G Car1 carbonic anhydrase 1 JBrowse link 2 88,185,204 88,227,486 RGD:1600115
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1600115
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1624291
RGD:13792537
G LOC100911564 glycine N-methyltransferase-like JBrowse link 9 16,314,136 16,317,575 RGD:13792537
G Mat1a methionine adenosyltransferase 1A JBrowse link 16 18,690,649 18,709,135 RGD:1600115
G Mat2a methionine adenosyltransferase 2A JBrowse link 4 100,297,478 100,303,047 RGD:1600115
G Mat2b methionine adenosyltransferase 2B JBrowse link 10 25,832,096 25,848,045 RGD:1600115
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1302361
RGD:1624291
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase JBrowse link 4 115,004,433 115,015,965 RGD:13792537
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:13792537
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:13792537
G Sfxn1 sideroflexin 1 JBrowse link 17 11,046,588 11,082,219 RGD:1600115
RGD:1624291
G Sfxn3 sideroflexin 3 JBrowse link 1 264,796,671 264,805,159 RGD:1600115
RGD:1624291
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:13792537
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
RGD:13792537
tetrahydrofolate interconversion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:7245485
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1600115
RGD:1624291
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase JBrowse link 4 115,004,433 115,015,965 RGD:13792537
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:7244288
RGD:13792537
RGD:1600115
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1600115
RGD:13792537
RGD:1624291
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:1624291
RGD:13792537
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:7245485
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:1600115
RGD:13792537
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1600115
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  biological_process 19332
    metabolic process 11554
      cellular metabolic process 10566
        one-carbon metabolic process 25
          serine-isocitrate lyase pathway 0
          tetrahydrofolate interconversion 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.