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ONTOLOGY REPORT - ANNOTATIONS


Term:fat-soluble vitamin metabolic process
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Accession:GO:0006775 term browser browse the term
Definition:The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.
Synonyms:exact_synonym: fat-soluble vitamin metabolism


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calcitriol biosynthetic process from calciol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 JBrowse link 9 81,968,285 81,998,213 RGD:1600115
RGD:13792537
RGD:1624291
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:1624291
RGD:13792537
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 JBrowse link 1 184,060,521 184,106,604 RGD:1624291
G LOC100909462 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like RGD:13792537
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:1624291
G Gfi1 growth factor independent 1 transcriptional repressor JBrowse link 14 3,058,035 3,073,332 RGD:1624291
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:1624291
RGD:1600115
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snai1 snail family transcriptional repressor 1 JBrowse link 3 164,274,710 164,279,199 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
positive regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1600115
RGD:1624291
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1624291
RGD:1600115
regulation of vitamin A metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgat1 diacylglycerol O-acyltransferase 1 JBrowse link 7 117,566,363 117,576,735 RGD:10400849
G Isx intestine-specific homeobox JBrowse link 19 14,198,899 14,219,269 RGD:1624291
retinoic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link 8 59,344,097 59,352,135 RGD:1600115
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 1 256,382,861 256,386,729 RGD:1624291
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 JBrowse link 4 116,261,796 116,278,615 RGD:6771354
RGD:1624291
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 JBrowse link 1 256,369,410 256,380,649 RGD:1624291
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 JBrowse link 12 17,382,749 17,387,909 RGD:1624291
vitamin A metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:1599829
RGD:1624291
RGD:1599832
RGD:1599831
G Ppard peroxisome proliferator-activated receptor delta JBrowse link 20 7,818,289 7,883,482 RGD:1625187
G Rbp1 retinol binding protein 1 JBrowse link 8 106,449,321 106,470,842 RGD:1624291
RGD:1600115
vitamin D catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 JBrowse link 3 168,097,484 168,111,920 RGD:625496
RGD:13792537
RGD:14995311
RGD:14995316
RGD:1624291
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:69373
RGD:13792537
RGD:1624291
G Fgf23 fibroblast growth factor 23 JBrowse link 4 159,622,404 159,630,082 RGD:1624291
G LOC100909462 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like RGD:13792537
vitamin D metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Calb1 calbindin 1 JBrowse link 5 29,538,380 29,562,774 RGD:68751
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 JBrowse link 3 168,097,484 168,111,920 RGD:1298844
RGD:1624291
RGD:734870
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:68680
RGD:1624291
RGD:69372
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 JBrowse link 1 184,060,521 184,106,604 RGD:1624291
G Fgf23 fibroblast growth factor 23 JBrowse link 4 159,622,404 159,630,082 RGD:1598934
G Gc GC, vitamin D binding protein JBrowse link 14 20,267,023 20,302,577 RGD:1624291
RGD:1600115
vitamin D3 metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:1624291
RGD:1600115
G Fgfr4 fibroblast growth factor receptor 4 JBrowse link 17 9,990,072 10,004,339 RGD:1624291
vitamin E biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pltp phospholipid transfer protein JBrowse link 3 161,304,469 161,322,289 RGD:1624291
vitamin E metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttpa alpha tocopherol transfer protein JBrowse link 5 34,007,926 34,029,315 RGD:1600435
RGD:13792537
RGD:1624291
vitamin K biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubiad1 UbiA prenyltransferase domain containing 1 JBrowse link 5 165,247,630 165,259,228 RGD:1600115
RGD:13792537
RGD:1624291
vitamin K catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 JBrowse link 7 15,179,472 15,191,113 RGD:13792537
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 JBrowse link 16 19,501,680 19,528,935 RGD:13792537
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 JBrowse link 7 14,891,062 14,907,250 RGD:13792537
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 JBrowse link 7 14,865,941 14,880,084 RGD:13792537
vitamin K metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbr1 carbonyl reductase 1 JBrowse link 11 33,813,041 33,815,418 RGD:1624291
RGD:1600115
G LOC103693015 vitamin K epoxide reductase complex subunit 1-like protein 1 JBrowse link 8 16,287,755 16,337,927 RGD:8553362
RGD:13792537
G Vkorc1 vitamin K epoxide reductase complex, subunit 1 JBrowse link 1 199,338,785 199,341,306 RGD:1624291
RGD:13792537
RGD:1600115
G Vkorc1l1 vitamin K epoxide reductase complex, subunit 1-like 1 JBrowse link 12 30,218,825 30,268,990 RGD:8553362
RGD:13792537
RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      small molecule metabolic process 1839
        vitamin metabolic process 81
          fat-soluble vitamin metabolic process 39
            fat-soluble vitamin biosynthetic process + 14
            fat-soluble vitamin catabolic process + 13
            vitamin A metabolic process + 5
            vitamin D metabolic process + 18
            vitamin E metabolic process + 2
            vitamin K metabolic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.