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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin A metabolic process
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Accession:GO:0006776 term browser browse the term
Definition:The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene.
Synonyms:exact_synonym: vitamin A metabolism


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vitamin A metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 NAS (PMID:8663198) UniProtKB PMID:8663198 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866
JBrowse link
G LRAT lecithin retinol acyltransferase ISS UniProt GO_REF:0000024 NCBI chr 4:154,740,838...154,753,120
Ensembl chr 4:154,626,945...154,753,120
JBrowse link
G PPARD peroxisome proliferator activated receptor delta IEA Ensembl GO_REF:0000107 NCBI chr 6:35,342,558...35,428,180
Ensembl chr 6:35,342,558...35,428,191
JBrowse link
G RBP1 retinol binding protein 1 IEA
IMP
(PMID:15632377) InterPro
UniProtKB
PMID:15632377 GO_REF:0000002 NCBI chr 3:139,517,438...139,539,742
Ensembl chr 3:139,517,434...139,539,829
JBrowse link
G RBP2 retinol binding protein 2 TAS (PMID:2992469) PINC PMID:2992469 NCBI chr 3:139,452,884...139,476,516
Ensembl chr 3:139,452,884...139,480,747
JBrowse link
G RLBP1 retinaldehyde binding protein 1 TAS (PMID:9326942) PINC PMID:9326942 NCBI chr15:89,209,869...89,223,179
Ensembl chr15:89,209,869...89,221,614
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 TAS (PMID:9326941) PINC PMID:9326941 NCBI chr 1:68,428,822...68,450,322
Ensembl chr 1:68,428,822...68,449,954
JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chr 8:144,314,584...144,326,852
Ensembl chr 8:144,314,584...144,326,910
JBrowse link
G ISX intestine specific homeobox ISO (MGI:MGI:3775349|PMID:18093975) MGI PMID:18093975 MGI:MGI:3775349 NCBI chr22:35,066,158...35,087,387
Ensembl chr22:35,066,136...35,087,387
JBrowse link
vitamin A biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCO1 beta-carotene oxygenase 1 NAS (PMID:15983114) BHF-UCL PMID:15983114 NCBI chr16:81,238,448...81,291,142
Ensembl chr16:81,238,689...81,291,142
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12301
      small molecule metabolic process 2146
        vitamin metabolic process 139
          fat-soluble vitamin metabolic process 48
            vitamin A metabolic process 10
              regulation of vitamin A metabolic process 2
              vitamin A biosynthetic process 1
Path 2
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12301
      primary metabolic process 11011
        lipid metabolic process 1522
          cellular lipid metabolic process 1123
            isoprenoid metabolic process 153
              terpenoid metabolic process 132
                diterpenoid metabolic process 122
                  retinoid metabolic process 113
                    vitamin A metabolic process 10
                      regulation of vitamin A metabolic process 2
                      vitamin A biosynthetic process 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.