ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle targeting
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Accession:GO:0006903 term browser browse the term
Definition:The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.


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vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP1M2 adaptor related protein complex 1 subunit mu 2 JBrowse link 19 10,785,627 10,801,617 RGD:9068941
G CLASP1 cytoplasmic linker associated protein 1 JBrowse link 2B 121,837,413 122,103,078 RGD:9068941
G CLASP2 cytoplasmic linker associated protein 2 JBrowse link 3 33,718,761 33,938,773 RGD:9068941
G LRMP lymphoid restricted membrane protein JBrowse link 12 63,820,075 63,876,237 RGD:9068941
G MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 JBrowse link 11 63,486,391 63,499,737 RGD:9068941
G SNAP23 synaptosome associated protein 23 JBrowse link 15 39,608,479 39,650,759 RGD:9068941
G SNAP29 synaptosome associated protein 29 JBrowse link 22 19,572,675 19,604,943 RGD:9068941
G YKT6 YKT6 v-SNARE homolog JBrowse link 7 44,975,782 44,996,195 RGD:9068941
COPI coating of Golgi vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARFGAP2 ADP ribosylation factor GTPase activating protein 2 JBrowse link 11 47,663,397 47,676,063 RGD:9068941
G ARFGAP3 ADP ribosylation factor GTPase activating protein 3 JBrowse link 22 41,834,579 41,885,925 RGD:9068941
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 10 102,316,329 102,452,439 RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 74,526,733 74,572,000 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 12 125,397,391 125,410,799 RGD:9068941
G TMED9 transmembrane p24 trafficking protein 9 JBrowse link 5 179,957,842 179,961,840 RGD:9068941
COPI-coated vesicle budding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 74,526,733 74,572,000 RGD:9068941
COPII vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD28 ankyrin repeat domain 28 JBrowse link 3 15,928,978 16,122,608 RGD:9068941
G AREG amphiregulin JBrowse link 4 55,570,299 55,580,142 RGD:9068941
G BET1 Bet1 golgi vesicular membrane trafficking protein JBrowse link 7 99,508,461 99,550,129 RGD:9068941
G CD59 CD59 molecule (CD59 blood group) JBrowse link 11 33,558,898 33,590,156 RGD:9068941
G CNIH1 cornichon family AMPA receptor auxiliary protein 1 JBrowse link 14 53,292,161 53,306,715 RGD:9068941
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 11 64,969,447 64,975,156 RGD:9068941
G CNIH3 cornichon family AMPA receptor auxiliary protein 3 JBrowse link 1 204,911,402 205,216,665 RGD:9068941
G COL7A1 collagen type VII alpha 1 chain JBrowse link 3 49,567,831 49,599,027 RGD:9068941
G CSNK1D casein kinase 1 delta JBrowse link 17 82,461,764 82,494,348 RGD:9068941
G CTSC cathepsin C JBrowse link 11 86,890,010 86,933,847 RGD:9068941
G CTSZ cathepsin Z JBrowse link 20 56,706,511 56,718,941 RGD:9068941
G CUL3 cullin 3 JBrowse link 2B 230,289,195 230,373,537 RGD:9068941
G F5 coagulation factor V JBrowse link 1 148,718,748 148,791,049 RGD:9068941
G F8 coagulation factor VIII JBrowse link X 154,156,864 154,345,635 RGD:9068941
G FOLR1 folate receptor 1 JBrowse link 11 70,492,039 70,498,665 RGD:9068941
G GOLGA2 golgin A2 JBrowse link 9 128,045,805 128,065,200 RGD:9068941
G GORASP1 golgi reassembly stacking protein 1 JBrowse link 3 39,273,272 39,285,008 RGD:9068941
G GOSR2 golgi SNAP receptor complex member 2 JBrowse link 17 10,715,176 10,759,013 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 154,877,807 155,204,660 RGD:9068941
G KLHL12 kelch like family member 12 JBrowse link 1 182,785,420 182,821,965 RGD:9068941
G LMAN1 lectin, mannose binding 1 JBrowse link 18 56,049,292 56,080,531 RGD:9068941
G LOC100985485 protein transport protein Sec16B JBrowse link 1 157,138,640 157,179,830 RGD:9068941
G MCFD2 multiple coagulation factor deficiency 2 JBrowse link 2A 47,950,679 47,962,005 RGD:9068941
G NAPA NSF attachment protein alpha JBrowse link 19 53,135,166 53,162,757 RGD:9068941
G NSF N-ethylmaleimide sensitive factor, vesicle fusing ATPase JBrowse link 17 10,923,875 11,056,565 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 5 436,489 446,986 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 1 31,930,814 31,946,170 RGD:9068941
G PPP6C protein phosphatase 6 catalytic subunit JBrowse link 9 124,783,166 124,825,877 RGD:9068941
G PPP6R1 protein phosphatase 6 regulatory subunit 1 JBrowse link 19 60,962,375 60,991,643 RGD:9068941
G PPP6R3 protein phosphatase 6 regulatory subunit 3 JBrowse link 11 66,851,708 67,004,292 RGD:9068941
G PREB prolactin regulatory element binding JBrowse link 2A 27,218,957 27,222,876 RGD:9068941
G RAB1A RAB1A, member RAS oncogene family JBrowse link 2A 66,274,809 66,318,290 RGD:9068941
G RAB1B RAB1B, member RAS oncogene family JBrowse link 11 64,959,957 64,968,843 RGD:9068941
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 5 136,151,592 136,181,967 RGD:9068941
G SCFD1 sec1 family domain containing 1 JBrowse link 14 29,602,185 29,709,133 RGD:9068941
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 3 10,588,644 10,608,754 RGD:9068941
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor JBrowse link 9 136,493,957 136,533,672 RGD:9068941
G SEC23A Sec23 homolog A, coat complex II component JBrowse link 14 38,159,381 38,229,366 RGD:9068941
G SEC23IP SEC23 interacting protein JBrowse link 10 119,876,573 119,927,321 RGD:9068941
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 5 136,197,495 136,273,158 RGD:9068941
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 4 112,522,127 112,628,065 RGD:9068941
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 10 72,940,855 72,968,027 RGD:9068941
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 4 121,468,914 121,584,647 RGD:9068941
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 4 47,164,207 47,236,223 RGD:9068941
G SERPINA1 serpin family A member 1 JBrowse link 14 94,334,258 94,347,085 RGD:9068941
G STX5 syntaxin 5 JBrowse link 11 61,516,348 61,541,509 RGD:9068941
G TBC1D20 TBC1 domain family member 20 JBrowse link 20 414,066 429,189 RGD:9068941
G TFG trafficking from ER to golgi regulator JBrowse link 3 104,482,338 104,521,919 RGD:9068941
G TGFA transforming growth factor alpha JBrowse link 2A 71,625,196 71,731,461 RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 74,526,733 74,572,000 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 12 125,397,391 125,410,799 RGD:9068941
G TRAPPC1 trafficking protein particle complex 1 JBrowse link 17 7,951,885 7,953,654 RGD:9068941
G TRAPPC10 trafficking protein particle complex 10 JBrowse link 21 43,585,857 43,659,760 RGD:9068941
G TRAPPC2 trafficking protein particle complex 2 JBrowse link X 13,609,852 13,629,926 RGD:9068941
G TRAPPC2L trafficking protein particle complex 2 like JBrowse link 16 89,226,211 89,231,854 RGD:9068941
G TRAPPC3 trafficking protein particle complex 3 JBrowse link 1 36,577,114 36,590,226 RGD:9068941
G TRAPPC4 trafficking protein particle complex 4 JBrowse link 11 117,786,819 117,792,022 RGD:9068941
G TRAPPC5 trafficking protein particle complex 5 JBrowse link 19 7,824,906 7,826,947 RGD:9068941
G TRAPPC6A trafficking protein particle complex 6A JBrowse link 19 50,713,498 50,727,579 RGD:9068941
G TRAPPC6B trafficking protein particle complex 6B JBrowse link 14 38,273,526 38,296,231 RGD:9068941
G TRAPPC9 trafficking protein particle complex 9 JBrowse link 8 139,495,813 140,267,032 RGD:9068941
G USO1 USO1 vesicle transport factor JBrowse link 4 54,229,601 54,317,402 RGD:9068941
regulation of COPII vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 8 143,482,245 143,488,498 RGD:9068941
G PREB prolactin regulatory element binding JBrowse link 2A 27,218,957 27,222,876 RGD:9068941
G SAR1A secretion associated Ras related GTPase 1A JBrowse link 10 69,151,972 69,171,929 RGD:9068941
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 5 136,151,592 136,181,967 RGD:9068941
regulation of vesicle targeting, to, from or within Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GOSR1 golgi SNAP receptor complex member 1 JBrowse link 17 26,769,855 26,813,775 RGD:9068941
synaptic vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NLGN1 neuroligin 1 JBrowse link 3 178,595,014 179,505,810 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 14 72,579,024 72,663,876 RGD:9068941
G SCRIB scribble planar cell polarity protein JBrowse link 8 143,557,479 143,582,409 RGD:9068941
G SEPTIN5 septin 5 JBrowse link 22 18,150,865 18,159,697 RGD:9068941
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 74,526,733 74,572,000 RGD:9068941
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP1AR adaptor related protein complex 1 associated regulatory protein JBrowse link 4 115,282,638 115,325,525 RGD:9068941
G WIPI1 WD repeat domain, phosphoinositide interacting 1 JBrowse link 17 67,748,201 67,784,313 RGD:9068941
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP19 centrosomal protein 19 JBrowse link 3 203,990,477 203,996,486 RGD:9068941
vesicle tethering involved in exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EXOC4 exocyst complex component 4 JBrowse link 7 137,734,349 138,537,446 RGD:9068941
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STARD3 StAR related lipid transfer domain containing 3 JBrowse link 17 17,841,500 17,868,535 RGD:9068941
G STARD3NL STARD3 N-terminal like JBrowse link 7 39,032,317 39,084,789 RGD:9068941
vesicle tethering to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C17H17orf75 chromosome 17 C17orf75 homolog JBrowse link 17 24,714,701 24,732,604 RGD:9068941
G FAM91A1 family with sequence similarity 91 member A1 JBrowse link 8 123,218,674 123,265,837 RGD:9068941
G TBC1D23 TBC1 domain family member 23 JBrowse link 3 104,035,926 104,100,345 RGD:9068941
G WDR11 WD repeat domain 11 JBrowse link 10 120,845,695 120,903,540 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15676
    cellular process 14345
      vesicle targeting 91
        contractile vacuole tethering involved in discharge 0
        synaptic vesicle targeting 4
        vesicle targeting to fusome 0
        vesicle targeting, plasma membrane to endosome + 0
        vesicle targeting, to, from or within Golgi + 72
        vesicle tethering + 7
Path 2
Term Annotations click to browse term
  biological_process 15676
    localization 6180
      cellular localization 2805
        organelle localization 685
          vesicle localization 305
            establishment of vesicle localization 289
              vesicle targeting 91
                contractile vacuole tethering involved in discharge 0
                synaptic vesicle targeting 4
                vesicle targeting to fusome 0
                vesicle targeting, plasma membrane to endosome + 0
                vesicle targeting, to, from or within Golgi + 72
                vesicle tethering + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.