ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle targeting
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Accession:GO:0006903 term browser browse the term
Definition:The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.


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vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP1M2 adaptor related protein complex 1 subunit mu 2 JBrowse link 20 50,594,703 50,605,762 RGD:9068941
G CLASP1 cytoplasmic linker associated protein 1 JBrowse link 19 28,563,189 28,830,503 RGD:9068941
G CLASP2 cytoplasmic linker associated protein 2 JBrowse link 23 3,261,778 3,423,698 RGD:9068941
G LOC475497 synaptobrevin homolog YKT6 RGD:9068941
G LRMP lymphoid restricted membrane protein JBrowse link 27 22,369,197 22,422,421 RGD:9068941
G MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 JBrowse link 18 52,353,606 52,367,065 RGD:9068941
G MYH9 myosin heavy chain 9 JBrowse link 10 28,063,626 28,122,953 RGD:13508589
G SNAP23 synaptosome associated protein 23 JBrowse link 30 9,453,931 9,493,506 RGD:9068941
G SNAP29 synaptosome associated protein 29 JBrowse link 26 30,606,195 30,630,441 RGD:9068941
COPI coating of Golgi vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARFGAP2 ADP ribosylation factor GTPase activating protein 2 JBrowse link 18 42,399,743 42,410,044 RGD:9068941
G ARFGAP3 ADP ribosylation factor GTPase activating protein 3 JBrowse link 10 22,658,959 22,710,727 RGD:9068941
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 28 14,775,431 14,896,121 RGD:13508589
RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 8 48,221,372 48,257,242 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 26 6,039,046 6,047,490 RGD:9068941
G TMED9 transmembrane p24 trafficking protein 9 JBrowse link 11 3,510,302 3,513,489 RGD:9068941
COPI-coated vesicle budding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 8 48,221,372 48,257,242 RGD:9068941
COPII vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD28 ankyrin repeat domain 28 JBrowse link 23 26,824,219 27,012,601 RGD:9068941
G AREG amphiregulin JBrowse link 13 62,925,761 62,936,753 RGD:9068941
G BET1 Bet1 golgi vesicular membrane trafficking protein JBrowse link 14 19,490,556 19,499,960 RGD:9068941
G CD59 CD59 molecule JBrowse link 18 33,977,433 33,999,145 RGD:9068941
G CNIH1 cornichon family AMPA receptor auxiliary protein 1 JBrowse link 8 30,365,010 30,379,356 RGD:9068941
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 18 51,020,263 51,026,280 RGD:9068941
G CNIH3 cornichon family AMPA receptor auxiliary protein 3 JBrowse link 7 39,754,148 39,846,436 RGD:9068941
G COL7A1 collagen type VII alpha 1 chain JBrowse link 20 40,519,121 40,550,305 RGD:9068941
G CSNK1D casein kinase 1 delta JBrowse link 9 83,395 110,309 RGD:9068941
G CTSC cathepsin C JBrowse link 21 11,659,296 11,692,957 RGD:9068941
G CTSZ cathepsin Z JBrowse link 24 43,743,291 43,750,154 RGD:9068941
G CUL3 cullin 3 JBrowse link 25 37,730,903 37,819,851 RGD:9068941
G F5 coagulation factor V JBrowse link 7 28,999,481 29,069,603 RGD:9068941
G F8 coagulation factor VIII JBrowse link X 122,894,974 123,046,343 RGD:9068941
G FOLR1 folate receptor 1 JBrowse link 21 25,944,350 25,951,010 RGD:9068941
G GOLGA2 golgin A2 JBrowse link 9 55,234,836 55,251,698 RGD:9068941
G GORASP1 golgi reassembly stacking protein 1 JBrowse link 23 8,766,243 8,776,278 RGD:9068941
G GOSR2 golgi SNAP receptor complex member 2 JBrowse link 9 10,201,625 10,220,688 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 4 55,801,269 56,103,383 RGD:9068941
G KLHL12 kelch like family member 12 JBrowse link 7 256,814 284,132 RGD:9068941
G LMAN1 lectin, mannose binding 1 JBrowse link 1 16,869,106 16,897,911 RGD:9068941
G MCFD2 multiple coagulation factor deficiency 2 JBrowse link 10 49,091,466 49,101,769 RGD:9068941
G NAPA NSF attachment protein alpha JBrowse link 1 108,510,920 108,533,317 RGD:9068941
G NSF N-ethylmaleimide sensitive factor, vesicle fusing ATPase JBrowse link 9 9,927,149 10,072,656 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 34 11,909,657 11,929,850 RGD:13508589
RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 2 69,465,773 69,482,465 RGD:9068941
G PPP6C protein phosphatase 6 catalytic subunit JBrowse link 9 57,884,035 57,921,080 RGD:9068941
G PPP6R1 protein phosphatase 6 regulatory subunit 1 JBrowse link 1 102,406,257 102,427,429 RGD:9068941
G PPP6R3 protein phosphatase 6 regulatory subunit 3 JBrowse link 18 49,287,571 49,432,503 RGD:9068941
G PREB prolactin regulatory element binding JBrowse link 17 21,116,427 21,120,250 RGD:9068941
G RAB1A RAB1A, member RAS oncogene family JBrowse link 10 64,564,351 64,590,654 RGD:9068941
G RAB1B RAB1B, member RAS oncogene family JBrowse link 18 51,026,975 51,034,356 RGD:9068941
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 11 22,713,459 22,743,190 RGD:9068941
G SCFD1 sec1 family domain containing 1 JBrowse link 8 9,970,724 10,077,123 RGD:9068941
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 20 8,041,485 8,075,078 RGD:9068941
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor JBrowse link 9 49,027,190 49,060,858 RGD:9068941
G SEC16B SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 7 21,683,310 21,739,914 RGD:9068941
RGD:13508589
G SEC22B SEC22 homolog B, vesicle trafficking protein JBrowse link 17 57,094,038 57,115,891 RGD:9068941
G SEC23A Sec23 homolog A, coat complex II component JBrowse link 8 17,205,960 17,292,067 RGD:9068941
G SEC23IP SEC23 interacting protein JBrowse link 28 30,007,780 30,047,513 RGD:9068941
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 11 22,749,633 22,813,045 RGD:9068941
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 32 29,671,702 29,766,628 RGD:9068941
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 4 24,183,768 24,209,062 RGD:9068941
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 32 37,690,158 37,795,762 RGD:9068941
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 32 6,761,018 6,840,802 RGD:9068941
G SERPINA1 serpin family A member 1 JBrowse link 8 63,388,498 63,400,377 RGD:9068941
G STX5 syntaxin 5 JBrowse link 18 53,862,432 53,883,091 RGD:9068941
G TBC1D20 TBC1 domain family member 20 JBrowse link 24 20,400,647 20,419,652 RGD:9068941
G TFG trafficking from ER to golgi regulator JBrowse link 33 7,240,912 7,265,526 RGD:13508589
RGD:9068941
G TGFA transforming growth factor alpha JBrowse link 10 68,915,671 68,957,027 RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 8 48,221,372 48,257,242 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 26 6,039,046 6,047,490 RGD:9068941
G TRAPPC1 trafficking protein particle complex 1 JBrowse link 5 32,784,577 32,786,060 RGD:9068941
G TRAPPC10 trafficking protein particle complex 10 JBrowse link 31 37,910,480 37,999,559 RGD:9068941
G TRAPPC2 trafficking protein particle complex 2 JBrowse link X 10,128,169 10,140,386 RGD:9068941
G TRAPPC2L trafficking protein particle complex 2 like JBrowse link 5 64,529,186 64,534,090 RGD:9068941
G TRAPPC3 trafficking protein particle complex 3 JBrowse link 15 6,069,003 6,085,709 RGD:9068941
G TRAPPC4 trafficking protein particle complex 4 JBrowse link 5 14,830,604 14,833,444 RGD:9068941
G TRAPPC5 trafficking protein particle complex 5 JBrowse link 20 52,444,733 52,446,805 RGD:9068941
G TRAPPC6A trafficking protein particle complex 6A JBrowse link 1 110,328,448 110,339,394 RGD:9068941
G TRAPPC6B trafficking protein particle complex 6B JBrowse link 8 17,335,060 17,350,163 RGD:9068941
G TRAPPC9 trafficking protein particle complex 9 JBrowse link 13 34,579,134 35,115,508 RGD:9068941
G USO1 USO1 vesicle transport factor JBrowse link 32 305,895 395,113 RGD:9068941
regulation of COPII vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 13 37,317,061 37,322,792 RGD:13508589
RGD:9068941
G PREB prolactin regulatory element binding JBrowse link 17 21,116,427 21,120,250 RGD:9068941
G SAR1B secretion associated Ras related GTPase 1B JBrowse link 11 22,713,459 22,743,190 RGD:9068941
regulation of vesicle targeting, to, from or within Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GOSR1 golgi SNAP receptor complex member 1 JBrowse link 9 44,478,826 44,537,405 RGD:9068941
synaptic vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NLGN1 neuroligin 1 JBrowse link 34 37,397,772 38,203,634 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 8 46,495,551 46,569,532 RGD:13508589
RGD:9068941
G SCRIB scribble planar cell polarity protein JBrowse link 13 37,356,405 37,374,765 RGD:9068941
G SEPTIN5 septin 5 JBrowse link 26 29,568,776 29,573,837 RGD:9068941
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 8 48,221,372 48,257,242 RGD:9068941
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP1AR adaptor related protein complex 1 associated regulatory protein JBrowse link 32 32,083,077 32,123,857 RGD:9068941
G WIPI1 WD repeat domain, phosphoinositide interacting 1 JBrowse link 9 15,115,098 15,147,893 RGD:13508589
RGD:9068941
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP19 centrosomal protein 19 JBrowse link 33 29,733,860 29,740,836 RGD:13508589
RGD:9068941
vesicle tethering involved in exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EXOC4 exocyst complex component 4 JBrowse link 14 3,334,286 4,077,478 RGD:13508589
RGD:9068941
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STARD3 StAR related lipid transfer domain containing 3 JBrowse link 9 22,814,782 22,837,525 RGD:13508589
RGD:9068941
G STARD3NL STARD3 N-terminal like JBrowse link 18 11,732,949 11,784,241 RGD:13508589
RGD:9068941
vesicle tethering to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C9H17orf75 chromosome 9 C17orf75 homolog JBrowse link 9 40,617,595 40,627,887 RGD:9068941
G FAM91A1 family with sequence similarity 91 member A1 JBrowse link 13 22,036,518 22,082,278 RGD:9068941
G TBC1D23 TBC1 domain family member 23 JBrowse link 33 6,883,199 6,939,788 RGD:13508589
RGD:9068941
G WDR11 WD repeat domain 11 JBrowse link 28 30,769,223 30,828,628 RGD:13508589
RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15735
    cellular process 14359
      vesicle targeting 92
        contractile vacuole tethering involved in discharge 0
        synaptic vesicle targeting 4
        vesicle targeting to fusome 0
        vesicle targeting, plasma membrane to endosome + 0
        vesicle targeting, to, from or within Golgi + 72
        vesicle tethering + 7
Path 2
Term Annotations click to browse term
  biological_process 15735
    localization 6224
      cellular localization 2832
        organelle localization 694
          vesicle localization 308
            establishment of vesicle localization 291
              vesicle targeting 92
                contractile vacuole tethering involved in discharge 0
                synaptic vesicle targeting 4
                vesicle targeting to fusome 0
                vesicle targeting, plasma membrane to endosome + 0
                vesicle targeting, to, from or within Golgi + 72
                vesicle tethering + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.