ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle fusion
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Accession:GO:0006906 term browser browse the term
Definition:Fusion of the membrane of a transport vesicle with its target membrane.


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vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C2cd5 C2 calcium-dependent domain containing 5 JBrowse link 4 177,245,868 177,331,910 RGD:1624291
RGD:1600115
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1624291
RGD:8554755
RGD:1600115
G Dysf dysferlin JBrowse link 4 115,700,942 115,901,873 RGD:1624291
RGD:1600115
G Eea1 early endosome antigen 1 JBrowse link 7 37,101,415 37,186,534 RGD:1624291
RGD:1600115
G Gnai3 G protein subunit alpha i3 JBrowse link 2 210,896,779 210,934,733 RGD:728690
G Gosr1 golgi SNAP receptor complex member 1 JBrowse link 10 63,405,526 63,442,257 RGD:13792537
G LOC100910446 syntaxin-7-like JBrowse link 1 23,542,376 23,560,911 RGD:13792537
G LOC103690878 syntaxin-3-like JBrowse link X 79,742,224 79,743,117 RGD:13792537
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase JBrowse link 10 91,879,608 91,986,242 RGD:8553822
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Stx11 syntaxin 11 JBrowse link 1 7,039,160 7,064,870 RGD:13792537
G Stx12 syntaxin 12 JBrowse link 5 151,044,050 151,072,893 RGD:13792537
G Stx16 syntaxin 16 JBrowse link 3 172,154,739 172,183,699 RGD:13792537
G Stx17 syntaxin 17 JBrowse link 5 63,866,346 63,926,276 RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:13792537
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:13792537
G Stx2 syntaxin 2 JBrowse link 12 31,324,203 31,360,249 RGD:1298910
RGD:13792537
RGD:728629
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13792537
G Stx5 syntaxin 5 JBrowse link 1 224,939,497 224,955,658 RGD:13792537
G Stx6 syntaxin 6 JBrowse link 13 72,804,218 72,850,757 RGD:1624291
RGD:13792537
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:4892614
RGD:13792537
G Stx8 syntaxin 8 JBrowse link 10 54,512,922 54,753,302 RGD:4892614
RGD:13792537
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:4892614
RGD:13792537
RGD:1624291
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:4892614
RGD:1624291
G Vav3 vav guanine nucleotide exchange factor 3 JBrowse link 2 212,247,061 212,585,818 RGD:1624291
RGD:1600115
autophagosome-endosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rubcnl rubicon like autophagy enhancer JBrowse link 15 57,065,512 57,109,197 RGD:1600115
RGD:1624291
autophagosome-lysosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rubcnl rubicon like autophagy enhancer JBrowse link 15 57,065,512 57,109,197 RGD:1600115
RGD:1624291
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1600115
RGD:1624291
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1624291
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:1600115
RGD:1624291
endosomal vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankfy1 ankyrin repeat and FYVE domain containing 1 JBrowse link 10 59,259,955 59,331,669 RGD:1624291
RGD:1600115
G Samd9 sterile alpha motif domain containing 9 JBrowse link 4 28,304,967 28,324,637 RGD:1624291
RGD:1600115
G Tgfbrap1 transforming growth factor, beta receptor associated protein 1 JBrowse link 9 49,852,560 49,902,943 RGD:1624291
RGD:1600115
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1624291
G Vps39 VPS39 subunit of HOPS complex JBrowse link 3 112,087,213 112,125,307 RGD:1624291
RGD:1600115
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:1624291
RGD:1600115
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
G Vps8 VPS8 subunit of CORVET complex JBrowse link 11 83,104,912 83,323,606 RGD:1624291
RGD:13792537
Golgi vesicle fusion to target membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkd2 NKD inhibitor of WNT signaling pathway 2 JBrowse link 1 32,054,390 32,085,416 RGD:1624291
RGD:1600115
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:1624291
RGD:13792537
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:13792537
negative regulation of SNARE complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd27 ankyrin repeat domain 27 JBrowse link 1 91,857,048 91,958,763 RGD:1624291
RGD:1600115
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:730238
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:631246
negative regulation of vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coro1a coronin 1A JBrowse link 1 198,123,883 198,128,890 RGD:1624291
RGD:1600115
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:7241021
RGD:11535104
G Tbc1d4 TBC1 domain family, member 4 JBrowse link 15 85,927,978 86,105,829 RGD:7247577
phagosome-lysosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab20 RAB20, member RAS oncogene family JBrowse link 16 83,358,116 83,382,326 RGD:1624291
RGD:1600115
G Rab34 RAB34, member RAS oncogene family JBrowse link 10 65,448,111 65,452,178 RGD:1624291
RGD:13792537
RGD:1600115
G Rab39a RAB39A, member RAS oncogene family JBrowse link 8 58,275,984 58,292,995 RGD:1624291
RGD:1600115
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
RGD:13792537
RGD:1600115
G Rab7b Rab7b, member RAS oncogene family JBrowse link 13 48,456,143 48,483,714 RGD:13792537
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
RGD:1600115
G Tmem175 transmembrane protein 175 JBrowse link 14 2,083,745 2,100,006 RGD:1624291
RGD:1600115
phagosome-lysosome fusion involved in apoptotic cell clearance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spg11 SPG11 vesicle trafficking associated, spatacsin JBrowse link 3 113,999,600 114,064,438 RGD:1624291
RGD:1600115
positive regulation of SNARE complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cltrn collectrin, amino acid transport regulator JBrowse link X 32,118,082 32,153,687 RGD:1624291
positive regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:633897
positive regulation of vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1600115
RGD:1624291
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:1624291
RGD:13792537
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
RGD:13792537
G C2cd5 C2 calcium-dependent domain containing 5 JBrowse link 4 177,245,868 177,331,910 RGD:1624291
RGD:1600115
G Doc2b double C2 domain beta JBrowse link 10 63,921,255 63,952,944 RGD:8554556
RGD:1600115
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:11059541
G Pla2g4a phospholipase A2 group IVA JBrowse link 13 67,062,252 67,206,688 RGD:1642447
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:7241021
RGD:11535104
G Syt3 synaptotagmin 3 JBrowse link 1 100,379,236 100,407,862 RGD:7241021
regulation of endosomal vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1600115
RGD:1624291
regulation of SNARE complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sept8 septin 8 JBrowse link 10 38,877,422 38,906,480 RGD:13702278
G Stxbp6 syntaxin binding protein 6 JBrowse link 6 65,086,483 65,319,527 RGD:1624291
RGD:1600115
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:13792537
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 3 122,947,887 122,969,543 RGD:13792537
G Vps18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 3 111,097,352 111,108,206 RGD:13792537
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:13792537
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:1600115
RGD:1624291
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:1600115
RGD:1624291
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1600115
RGD:1624291
G Grik5 glutamate ionotropic receptor kainate type subunit 5 JBrowse link 1 81,885,516 81,946,731 RGD:1624291
RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1600115
RGD:13792537
RGD:1624291
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
regulation of vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slamf1 signaling lymphocytic activation molecule family member 1 JBrowse link 13 90,184,545 90,219,170 RGD:1624291
RGD:1600115
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:12903988
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
RGD:11541109
SNARE complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:12793015
RGD:12793053
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1600115
RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:12793015
RGD:12793053
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:1624291
RGD:1600115
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1600115
RGD:1624291
G Uvrag UV radiation resistance associated JBrowse link 1 163,844,804 164,101,568 RGD:1624291
RGD:13792537
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:12793015
RGD:12793053
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:1624291
RGD:1600115
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:1624291
RGD:1600115
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
RGD:1600115
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1624291
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690878 syntaxin-3-like JBrowse link X 79,742,224 79,743,117 RGD:13792537
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115
G Stx11 syntaxin 11 JBrowse link 1 7,039,160 7,064,870 RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:11535099
RGD:13792537
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:13792537
G Stx2 syntaxin 2 JBrowse link 12 31,324,203 31,360,249 RGD:13792537
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13792537
vesicle fusion to plasma membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 JBrowse link 10 63,471,330 63,491,713 RGD:1624291
RGD:1600115
vesicle fusion with Golgi apparatus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bet1 Bet1 golgi vesicular membrane trafficking protein JBrowse link 4 29,082,368 29,092,638 RGD:4892613
RGD:13792537
G Gosr2 golgi SNAP receptor complex member 2 JBrowse link 10 91,735,772 91,756,123 RGD:13792537
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link 2 200,076,079 200,096,861 RGD:13792537
G Stx5 syntaxin 5 JBrowse link 1 224,939,497 224,955,658 RGD:4892613
G Uso1 USO1 vesicle transport factor JBrowse link 14 17,371,451 17,436,948 RGD:1600115
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:4892613
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:4892613
RGD:13792537
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:13792537
vesicle fusion with vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:11535113

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17896
    localization 5958
      establishment of localization 4566
        transport 4429
          vesicle-mediated transport 1417
            vesicle fusion 93
              Golgi vesicle fusion to target membrane + 3
              SNARE complex assembly + 22
              amphisome-lysosome fusion 0
              autophagosome-endosome fusion 1
              autophagosome-lysosome fusion 1
              endosomal vesicle fusion + 9
              negative regulation of vesicle fusion + 7
              phagosome-lysosome fusion + 8
              positive regulation of vesicle fusion + 15
              regulation of vesicle fusion + 35
              vesicle fusion to plasma membrane + 25
              vesicle fusion with Golgi apparatus + 8
              vesicle fusion with Golgi cis cisterna membrane + 0
              vesicle fusion with endoplasmic reticulum + 0
              vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane + 0
              vesicle fusion with nuclear membrane involved in mitotic nuclear envelope reassembly 0
              vesicle fusion with peroxisome 0
              vesicle fusion with vacuole 0
              vesicle fusion with vesicle 1
Path 2
Term Annotations click to browse term
  biological_process 17896
    cellular process 16040
      cellular component organization 6046
        organelle organization 3643
          organelle fusion 125
            organelle membrane fusion 98
              vesicle fusion 93
                Golgi vesicle fusion to target membrane + 3
                SNARE complex assembly + 22
                amphisome-lysosome fusion 0
                autophagosome-endosome fusion 1
                autophagosome-lysosome fusion 1
                endosomal vesicle fusion + 9
                negative regulation of vesicle fusion + 7
                phagosome-lysosome fusion + 8
                positive regulation of vesicle fusion + 15
                regulation of vesicle fusion + 35
                vesicle fusion to plasma membrane + 25
                vesicle fusion with Golgi apparatus + 8
                vesicle fusion with Golgi cis cisterna membrane + 0
                vesicle fusion with endoplasmic reticulum + 0
                vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane + 0
                vesicle fusion with nuclear membrane involved in mitotic nuclear envelope reassembly 0
                vesicle fusion with peroxisome 0
                vesicle fusion with vacuole 0
                vesicle fusion with vesicle 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.