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ONTOLOGY REPORT - ANNOTATIONS


Term:phagocytosis
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Accession:GO:0006909 term browser browse the term
Definition:A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.
Synonyms:xref: Wikipedia:Phagocytosis


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phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO MGI:MGI:2153718|MGI:MGI:87860 (MGI:MGI:5432825|PMID:22665498), (MGI:MGI:5449460|PMID:23100514) RGD PMID:22665498, PMID:23100514 MGI:MGI:5432825, MGI:MGI:5449460 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO MGI:MGI:2153719|MGI:MGI:87859 (MGI:MGI:5432825|PMID:22665498), (MGI:MGI:5449460|PMID:23100514) RGD PMID:22665498, PMID:23100514 MGI:MGI:5432825, MGI:MGI:5449460 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
JBrowse link
G Anxa1 annexin A1 ISO
IBA
ISS
(MGI:MGI:2449418|PMID:12475898)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:12475898, PMID:21873635 GO_REF:0000024, MGI:MGI:2449418, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Anxa11 annexin A11 ISO
IBA
(PMID:9188810)
PMID:21873635
RGD PMID:9188810, PMID:21873635 RGD:13792537 NCBI chr16:3,867,193...3,912,043
Ensembl chr16:3,867,208...3,912,148
JBrowse link
G Anxa3 annexin A3 ISO (PMID:9497492) RGD PMID:9497492 NCBI chr14:14,371,921...14,426,503
Ensembl chr14:14,364,008...14,426,437
JBrowse link
G Axl Axl receptor tyrosine kinase ISO
IBA
MGI:MGI:104294|MGI:MGI:96965 (MGI:MGI:4430045|PMID:19602523)
PMID:21873635
(PMID:21501828)
RGD PMID:19602523, PMID:21501828, PMID:21873635 MGI:MGI:4430045, RGD:13792537 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Cd302 CD302 molecule ISO
IEA
(PMID:17947679)
GO_REF:0000107
RGD
Ensembl
PMID:17947679 GO_REF:0000107 NCBI chr 3:46,327,382...46,361,092
Ensembl chr 3:46,327,383...46,361,092
JBrowse link
G Cdc42se1 CDC42 small effector 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:196,402,837...196,410,664
Ensembl chr 2:196,402,837...196,410,659
JBrowse link
G Cdc42se2 CDC42 small effector 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:40,054,393...40,122,915
Ensembl chr10:40,054,400...40,122,915
JBrowse link
G Ceacam4 CEA cell adhesion molecule 4 ISO (PMID:25567962) RGD PMID:25567962 NCBI chr 1:81,643,809...81,650,085
Ensembl chr 1:81,643,816...81,650,094
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon ISO MGI:MGI:2178607 (MGI:MGI:1336504|PMID:10216107), (MGI:MGI:2175935|PMID:11861297) RGD PMID:10216107, PMID:11861297 MGI:MGI:1336504, MGI:MGI:2175935 NCBI chr15:33,356,119...33,357,517
Ensembl chr15:33,355,947...33,358,138
JBrowse link
G Coro1a coronin 1A ISO (PMID:17442961) RGD PMID:17442961 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Dnm2 dynamin 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 ISO MGI:MGI:2679454 (MGI:MGI:3763756|PMID:17932563) RGD PMID:17932563 MGI:MGI:3763756 NCBI chr12:12,749,026...12,782,078
Ensembl chr12:12,748,785...12,782,146
JBrowse link
G Elane elastase, neutrophil expressed ISO
IBA
MGI:MGI:2182771 (MGI:MGI:3036957|PMID:15034066)
PMID:21873635
RGD PMID:15034066, PMID:21873635 MGI:MGI:3036957, RGD:13792537 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G Elmo1 engulfment and cell motility 1 ISO (MGI:MGI:2151718|PMID:11595183) RGD PMID:11595183 MGI:MGI:2151718 NCBI chr17:46,352,102...46,888,788
Ensembl chr17:46,353,330...46,794,845
JBrowse link
G Elmo2 engulfment and cell motility 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:161,812,474...161,850,006
Ensembl chr 3:161,812,474...162,003,588
JBrowse link
G Elmo3 engulfment and cell motility 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:37,260,330...37,264,832
Ensembl chr19:37,260,469...37,264,829
JBrowse link
G Gas6 growth arrest specific 6 ISO
ISS
(PMID:21501828)
GO_REF:0000024
RGD
UniProt
PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Gata2 GATA binding protein 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO MGI:MGI:2384049 (MGI:MGI:65050|PMID:8125254) RGD PMID:8125254 MGI:MGI:65050 NCBI chr 3:148,579,917...148,623,026
Ensembl chr 3:148,579,920...148,623,033
JBrowse link
G Icam5 intercellular adhesion molecule 5 ISO (MGI:MGI:3057045|PMID:15452145) RGD PMID:15452145 MGI:MGI:3057045 NCBI chr 8:22,050,222...22,057,209
Ensembl chr 8:22,050,222...22,057,209
JBrowse link
G Irf8 interferon regulatory factor 8 ISO MGI:MGI:1926332 (MGI:MGI:3773503|PMID:18045875) RGD PMID:18045875 MGI:MGI:3773503 NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640
JBrowse link
G Itgam integrin subunit alpha M ISO (MGI:MGI:85444|PMID:8986723) RGD PMID:8986723 MGI:MGI:85444 NCBI chr 1:199,495,312...199,545,738
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Itgb1 integrin subunit beta 1 IMP PMID:17410128 ARUK-UCL PMID:17410128 RGD:13673830 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(MGI:MGI:5902678|PMID:22383525)
Ensembl
RGD
PMID:22383525 GO_REF:0000107, MGI:MGI:5902678 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lep leptin IDA
ISS
ISO
PMID:9438411
GO_REF:0000024
(MGI:MGI:3690675|PMID:9438411)
UniProt
RGD
PMID:9438411, PMID:9438411 GO_REF:0000024, MGI:MGI:3690675, RGD:11041004 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lepr leptin receptor ISO
ISS
(MGI:MGI:3690675|PMID:9438411)
GO_REF:0000024
RGD
UniProt
PMID:9438411 GO_REF:0000024, MGI:MGI:3690675 NCBI chr 5:120,503,475...120,682,281
Ensembl chr 5:120,564,645...120,682,221
JBrowse link
G LOC100362023 CDC42 small effector 2-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:94,988,080...94,988,860
Ensembl chr10:40,054,400...40,122,915
JBrowse link
G LOC361985 similar to NICE-3 ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:6392972|PMID:31540829)
(PMID:31540829)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31540829 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6392972 NCBI chr 2:189,400,696...189,413,614
Ensembl chr 2:189,400,696...189,413,608
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (PMID:23152628) RGD PMID:23152628 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase IMP
IBA
ISO
IDA
PMID:21873635
(PMID:19204785)
RGD PMID:19204785, PMID:11861639, PMID:21873635, PMID:11861639 RGD:1299193, RGD:13792537, RGD:1299193 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444
JBrowse link
G Mesd mesoderm development LRP chaperone ISO
ISS
(MGI:MGI:5908511|PMID:27184668)
GO_REF:0000024
RGD
UniProt
PMID:27184668 GO_REF:0000024, MGI:MGI:5908511 NCBI chr 1:146,030,211...146,043,097
Ensembl chr 1:146,037,426...146,043,097
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mst1r macrophage stimulating 1 receptor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,686,601...116,700,132
Ensembl chr 8:116,686,601...116,700,132
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (PMID:30883606)
(MGI:MGI:6294226|PMID:30883606)
RGD PMID:30883606 MGI:MGI:6294226 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Myo1g myosin IG ISO MGI:MGI:5581464 (MGI:MGI:5566942|PMID:24310084) RGD PMID:24310084 MGI:MGI:5566942 NCBI chr14:86,781,243...86,796,393
Ensembl chr14:86,781,202...86,796,378
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:2155422 (MGI:MGI:2662763|PMID:12743369) RGD PMID:12743369 MGI:MGI:2662763 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Ncf2 neutrophil cytosolic factor 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:70,226,441...70,259,019
Ensembl chr13:70,226,647...70,257,576
JBrowse link
G Ncf4 neutrophil cytosolic factor 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:119,481,711...119,499,426
Ensembl chr 7:119,482,272...119,499,425
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 IMP PMID:17410128 ARUK-UCL PMID:17410128 RGD:13673830 NCBI chr 1:165,972,439...166,008,348
Ensembl chr 1:165,972,440...165,997,751
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO (PMID:12110892) RGD PMID:12110892 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:11,267,207...11,294,291
Ensembl chr 7:11,267,218...11,294,249
JBrowse link
G Pld4 phospholipase D family, member 4 ISO
IBA
(MGI:MGI:5308480|PMID:22102906)
PMID:21873635
RGD PMID:22102906, PMID:21873635 MGI:MGI:5308480, RGD:13792537 NCBI chr 6:137,323,713...137,331,231
Ensembl chr 6:137,323,713...137,331,231
JBrowse link
G Prtn3 proteinase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,643,712...12,646,951
Ensembl chr 7:12,643,516...12,646,960
JBrowse link
G Rab11fip2 RAB11 family interacting protein 2 ISO (PMID:30883606) RGD PMID:30883606 NCBI chr 1:281,065,346...281,101,163
Ensembl chr 1:281,065,168...281,101,438
JBrowse link
G Rab5a RAB5A, member RAS oncogene family IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:5,910...6,065 JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:72,889,022...72,891,156 JBrowse link
G RGD1307100 similar to RIKEN cDNA D630029K19 ISO (PMID:31540829) RGD PMID:31540829 NCBI chr 2:123,555,742...123,766,675
Ensembl chr 2:123,555,673...123,766,676
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO
IEA
MGI:MGI:1857755 (MGI:MGI:3773503|PMID:18045875)
GO_REF:0000107
RGD
Ensembl
PMID:18045875 GO_REF:0000107, MGI:MGI:3773503 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Syt7 synaptotagmin 7 ISO
ISS
(MGI:MGI:4849340|PMID:21041449)
GO_REF:0000024
RGD
UniProt
PMID:21041449 GO_REF:0000024, MGI:MGI:4849340 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link
G Tafa4 TAFA chemokine like family member 4 ISO
IBA
(MGI:MGI:6282963|PMID:25109685)
PMID:21873635
RGD PMID:25109685, PMID:21873635 MGI:MGI:6282963, RGD:13792537 NCBI chr 4:129,196,658...129,430,438
Ensembl chr 4:129,196,659...129,430,251
JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 ISO (PMID:30883606)
(MGI:MGI:6294226|PMID:30883606)
RGD PMID:30883606 MGI:MGI:6294226 NCBI chr18:40,555,106...40,572,569
Ensembl chr18:40,555,106...40,572,241
JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEA
(PMID:30883606)
GO_REF:0000107
RGD
Ensembl
PMID:30883606 GO_REF:0000107 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 ISO (PMID:19893578) RGD PMID:19893578 NCBI chr 3:148,635,822...148,689,961
Ensembl chr 3:148,635,775...148,688,553
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator ISO MGI:MGI:3706236 (MGI:MGI:5518492|PMID:24042119) RGD PMID:24042119 MGI:MGI:5518492 NCBI chr 8:116,318,963...116,322,181
Ensembl chr 8:116,318,963...116,322,181
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
G Unc13d unc-13 homolog D ISO
IEA
MGI:MGI:3628822 (MGI:MGI:3703574|PMID:17420270)
GO_REF:0000107
RGD
Ensembl
PMID:17420270 GO_REF:0000107, MGI:MGI:3703574 NCBI chr10:104,613,907...104,628,664
Ensembl chr10:104,613,928...104,628,676
JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 ISO
IEA
MGI:MGI:1888518 (MGI:MGI:3050945|PMID:15249579)
GO_REF:0000107
RGD
Ensembl
PMID:15249579 GO_REF:0000107, MGI:MGI:3050945 NCBI chr 9:9,617,551...9,675,167
Ensembl chr 9:9,617,786...9,675,110
JBrowse link
apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (PMID:24509909) RGD PMID:24509909 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISO
ISS
(MGI:MGI:5436199|PMID:22503541)
GO_REF:0000024
RGD
UniProt
PMID:22503541 GO_REF:0000024, MGI:MGI:5436199 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
G Axl Axl receptor tyrosine kinase ISO MGI:MGI:104294|MGI:MGI:2387750|MGI:MGI:96965 (MGI:MGI:3778590|PMID:18159085), (MGI:MGI:3836130|PMID:17442946), (MGI:MGI:3841855|PMID:18804096), (MGI:MGI:5509105|PMID:23878224) RGD PMID:17442946, PMID:18159085, PMID:18804096, PMID:23878224 MGI:MGI:3778590, MGI:MGI:3836130, MGI:MGI:3841855, MGI:MGI:5509105 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Cd36 CD36 molecule ISO (MGI:MGI:3618422|PMID:15647754) RGD PMID:15647754 MGI:MGI:3618422 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Gas6 growth arrest specific 6 ISO
ISS
(MGI:MGI:3778590|PMID:18159085)
GO_REF:0000024
(PMID:21501828)
RGD
UniProt
PMID:18159085, PMID:21501828 GO_REF:0000024, MGI:MGI:3778590 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Hmgb1 high mobility group box 1 ISO
ISS
(PMID:18768881)
GO_REF:0000024
RGD
UniProt
PMID:18768881 GO_REF:0000024 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Itgav integrin subunit alpha V ISO UniProtKB:P43406 (PMID:20826760)
UniProtKB:P06756 (MGI:MGI:3618422|PMID:15647754), (MGI:MGI:5285150|PMID:20826760)
RGD PMID:15647754, PMID:20826760 MGI:MGI:3618422, MGI:MGI:5285150 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb3 integrin subunit beta 3 ISO UniProtKB:O54890 (PMID:20826760)
UniProtKB:P05106 (MGI:MGI:5285150|PMID:20826760)
RGD PMID:20826760 MGI:MGI:5285150 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase NOT ISO MGI:MGI:3580706 (MGI:MGI:3580691|PMID:15345036)
MGI:MGI:3043930 (MGI:MGI:3042820|PMID:14715629), (MGI:MGI:3618422|PMID:15647754)
RGD PMID:14715629, PMID:15345036, PMID:15647754 MGI:MGI:3042820, MGI:MGI:3580691, MGI:MGI:3618422 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (MGI:MGI:3618422|PMID:15647754) RGD PMID:15647754 MGI:MGI:3618422 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Marco macrophage receptor with collagenous structure ISO (MGI:MGI:3831958|PMID:19201851) RGD PMID:19201851 MGI:MGI:3831958 NCBI chr16:85,115,199...85,147,683
Ensembl chr16:85,115,201...85,135,859
JBrowse link
G Megf10 multiple EGF-like domains 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO MGI:MGI:104294|MGI:MGI:1347244|MGI:MGI:2387768 (MGI:MGI:3778590|PMID:18159085), (MGI:MGI:3836130|PMID:17442946), (MGI:MGI:5509105|PMID:23878224), (MGI:MGI:6120635|PMID:29440417) RGD PMID:17442946, PMID:18159085, PMID:23878224, PMID:29440417 MGI:MGI:3778590, MGI:MGI:3836130, MGI:MGI:5509105, MGI:MGI:6120635 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing IEA
ISO
GO_REF:0000107
(MGI:MGI:5285150|PMID:20826760)
Ensembl
RGD
PMID:20826760 GO_REF:0000107, MGI:MGI:5285150 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISO (PMID:19628791) RGD PMID:19628791 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Rara retinoic acid receptor, alpha ISO (PMID:19628791) RGD PMID:19628791 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Tgm2 transglutaminase 2 ISO (PMID:19628791) RGD PMID:19628791 NCBI chr 3:154,597,165...154,627,257
Ensembl chr 3:154,597,168...154,627,257
JBrowse link
G Timd4 T-cell immunoglobulin and mucin domain containing 4 ISO (MGI:MGI:6120635|PMID:29440417) RGD PMID:29440417 MGI:MGI:6120635 NCBI chr10:31,880,822...31,917,215 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:3531054|PMID:15728241) RGD PMID:15728241 MGI:MGI:3531054 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:MGI:3052754 (MGI:MGI:5554502|PMID:24218451) RGD PMID:24218451 MGI:MGI:5554502 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Txndc5 thioredoxin domain containing 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:26,925,828...26,953,981
Ensembl chr17:26,925,828...26,953,970
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase IEA
ISO
ISS
GO_REF:0000107
MGI:MGI:1347244|MGI:MGI:96965 (MGI:MGI:3778590|PMID:18159085), (MGI:MGI:3836130|PMID:17442946)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442946, PMID:18159085 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3778590, MGI:MGI:3836130 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp ISS
ISO
GO_REF:0000024
(MGI:MGI:3531054|PMID:15728241)
UniProt
RGD
PMID:15728241 GO_REF:0000024, MGI:MGI:3531054 NCBI chr 1:88,875,370...88,879,305
Ensembl chr 1:88,875,375...88,879,303
JBrowse link
engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO
IBA
(PMID:24509909)
PMID:21873635
(MGI:MGI:3764740|PMID:17960134)
RGD PMID:17960134, PMID:24509909, PMID:21873635 MGI:MGI:3764740, RGD:13792537 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Becn1 beclin 1 ISO (MGI:MGI:5619450|PMID:22393062) RGD PMID:22393062 MGI:MGI:5619450 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Megf10 multiple EGF-like domains 10 ISO MGI:MGI:4454190 (MGI:MGI:5775214|PMID:27170117) RGD PMID:27170117 MGI:MGI:5775214 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Rac1 Rac family small GTPase 1 ISO
IBA
(MGI:MGI:4943793|PMID:20691665)
PMID:21873635
RGD PMID:20691665, PMID:21873635 MGI:MGI:4943793, RGD:13792537 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac2 Rac family small GTPase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:119,769,708...119,797,111
Ensembl chr 7:119,783,849...119,797,098
JBrowse link
G Rhobtb1 Rho-related BTB domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:20,638,579...20,715,437
Ensembl chr20:20,638,579...20,713,128
JBrowse link
G Rhobtb2 Rho-related BTB domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,465,148...51,485,562
Ensembl chr15:51,465,148...51,485,692
JBrowse link
G Rhog ras homolog family member G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,336,147...167,347,720
Ensembl chr 1:167,335,248...167,347,671
JBrowse link
G Rhoh ras homolog family member H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,961,756...43,992,587
Ensembl chr14:43,961,756...43,992,587
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Xkr4 XK related 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:15,746,012...16,141,059
Ensembl chr 5:15,747,614...16,140,896
JBrowse link
G Xkr5 XK related 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,744,786...75,762,694
Ensembl chr16:75,744,786...75,762,693
JBrowse link
G Xkr6 XK related 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:46,784,963...47,173,352
Ensembl chr15:46,784,963...47,173,335
JBrowse link
G Xkr7 XK related 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:148,508,622...148,537,904
Ensembl chr 3:148,510,779...148,533,404
JBrowse link
G Xkr8 XK related 8 ISO
IBA
(PMID:23845944)
PMID:21873635
RGD PMID:23845944, PMID:21873635 RGD:13792537 NCBI chr 5:150,918,600...150,925,727
Ensembl chr 5:150,918,603...150,925,727
JBrowse link
G Xkr9 XK related 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:4,946,332...4,975,436
Ensembl chr 5:4,946,006...4,975,436
JBrowse link
Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2b Fc fragment of IgG receptor IIb ISO (PMID:2142460) RGD PMID:2142460 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Myo1g myosin IG ISO (MGI:MGI:5586792|PMID:23038771) RGD PMID:23038771 MGI:MGI:5586792 NCBI chr14:86,781,243...86,796,393
Ensembl chr14:86,781,202...86,796,378
JBrowse link
negative regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300lf Cd300 molecule-like family member F ISO
ISS
(MGI:MGI:5819329|PMID:26768664)
GO_REF:0000024
RGD
UniProt
PMID:26768664 GO_REF:0000024, MGI:MGI:5819329 NCBI chr10:103,669,781...103,690,584
Ensembl chr10:103,670,028...103,687,425
JBrowse link
G Hmgb1 high mobility group box 1 ISO (PMID:20826760) RGD PMID:20826760 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ISO (MGI:MGI:6271154|PMID:25568335) RGD PMID:25568335 MGI:MGI:6271154 NCBI chr16:2,560,103...2,602,035
Ensembl chr16:2,563,520...2,602,103
JBrowse link
G Cd47 Cd47 molecule IMP PMID:21401967 ARUK-UCL PMID:21401967 RGD:13792533 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
negative regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:10961870)
GO_REF:0000024
RGD
UniProt
PMID:10961870 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Atg3 autophagy related 3 ISO (MGI:MGI:5562485|PMID:24035364) RGD PMID:24035364 MGI:MGI:5562485 NCBI chr11:60,585,192...60,613,706
Ensembl chr11:60,585,171...60,613,718
JBrowse link
G Atg5 autophagy related 5 ISO
IEA
(MGI:MGI:5562485|PMID:24035364)
GO_REF:0000107
RGD
Ensembl
PMID:24035364 GO_REF:0000107, MGI:MGI:5562485 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 ISO MGI:MGI:1934631|MGI:MGI:3587769 (MGI:MGI:5562485|PMID:24035364) RGD PMID:24035364 MGI:MGI:5562485 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Cnn2 calponin 2 ISO MGI:MGI:3820422 (MGI:MGI:3819912|PMID:18617524) RGD PMID:18617524 MGI:MGI:3819912 NCBI chr 7:12,782,459...12,787,977
Ensembl chr 7:12,782,491...12,787,750
JBrowse link
G Csk C-terminal Src kinase IDA RGD PMID:10884975 RGD:5134370 NCBI chr 8:62,405,714...62,424,707
Ensembl chr 8:62,405,715...62,424,303
JBrowse link
G Dysf dysferlin ISO
IBA
MGI:MGI:1857883 (MGI:MGI:3775586|PMID:18276788)
PMID:21873635
(PMID:18276788)
RGD PMID:18276788, PMID:21873635 MGI:MGI:3775586, RGD:13792537 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO MGI:MGI:1857166 (MGI:MGI:3608295|PMID:12385742) RGD PMID:12385742 MGI:MGI:3608295 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fer1l5 fer-1-like family member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,943,362...42,998,126
Ensembl chr 9:42,945,358...42,998,109
JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:6144310|PMID:29378918)
UniProt
RGD
PMID:29378918 GO_REF:0000024, MGI:MGI:6144310 NCBI chr 5:28,395,517...28,442,924
Ensembl chr 5:28,395,296...28,442,924
JBrowse link
G Plscr1 phospholipid scramblase 1 ISO
ISS
(PMID:26745724)
GO_REF:0000024
RGD
UniProt
PMID:26745724 GO_REF:0000024 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Prtn3 proteinase 3 ISO (PMID:17712045) RGD PMID:17712045 NCBI chr 7:12,643,712...12,646,951
Ensembl chr 7:12,643,516...12,646,960
JBrowse link
G Pten phosphatase and tensin homolog IMP RGD PMID:18056380 RGD:2292524 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rack1 receptor for activated C kinase 1 ISO
ISS
(PMID:21347310)
GO_REF:0000024
RGD
UniProt
PMID:21347310 GO_REF:0000024 NCBI chr10:34,149,717...34,155,198
Ensembl chr10:34,149,717...34,155,198
Ensembl chr12:34,149,717...34,155,198
JBrowse link
G Sftpd surfactant protein D IDA RGD PMID:12654779 RGD:4144053 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 ISO (PMID:22630829) RGD PMID:22630829 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109
JBrowse link
G Sirpa signal-regulatory protein alpha IMP
IEA
ISO
PMID:21401967
GO_REF:0000107
(MGI:MGI:6201881|PMID:21401967)
Ensembl
RGD
PMID:21401967, PMID:21401967 GO_REF:0000107, MGI:MGI:6201881, RGD:13792533 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Snx3 sorting nexin 3 ISO
ISS
(PMID:23237080)
GO_REF:0000024
RGD
UniProt
PMID:23237080 GO_REF:0000024 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
G Syt11 synaptotagmin 11 ISS
ISO
GO_REF:0000024
(MGI:MGI:5468041|PMID:23303671), (MGI:MGI:5913303|PMID:28686317)
UniProt
RGD
PMID:23303671, PMID:28686317 GO_REF:0000024, MGI:MGI:5468041, MGI:MGI:5913303 NCBI chr 2:188,112,301...188,138,180
Ensembl chr 2:188,112,286...188,138,177
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IDA RGD PMID:16272332 RGD:1579756 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tlr2 toll-like receptor 2 ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:MGI:5307186|PMID:22198949) RGD PMID:22198949 MGI:MGI:5307186 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
negative regulation of phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a Cd300a molecule ISO (PMID:22302738) RGD PMID:22302738 NCBI chr10:103,437,978...103,451,170
Ensembl chr10:103,438,303...103,450,947
JBrowse link
G Siglec8 sialic acid binding Ig-like lectin 8 ISO (MGI:MGI:5529741|PMID:24227736) RGD PMID:24227736 MGI:MGI:5529741 NCBI chr 1:99,576,946...99,587,441
Ensembl chr 1:99,578,372...99,587,205
JBrowse link
neutrophil clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO
IBA
(PMID:21957127)
PMID:21873635
RGD PMID:21957127, PMID:21873635 RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Axl Axl receptor tyrosine kinase ISO MGI:MGI:96965 (MGI:MGI:5509105|PMID:23878224) RGD PMID:23878224 MGI:MGI:5509105 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 ISO MGI:MGI:2158345 (MGI:MGI:1100445|PMID:9342361) RGD PMID:9342361 MGI:MGI:1100445
G Hmgb1 high mobility group box 1 ISO
ISS
(PMID:18768881)
GO_REF:0000024
RGD
UniProt
PMID:18768881 GO_REF:0000024 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO MGI:MGI:1347244 (MGI:MGI:5509105|PMID:23878224) RGD PMID:23878224 MGI:MGI:5509105 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444
JBrowse link
opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd47 Cd47 molecule ISO
IEA
(MGI:MGI:2680858|PMID:14634079)
GO_REF:0000107
RGD
Ensembl
PMID:14634079 GO_REF:0000107, MGI:MGI:2680858 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:MGI:3037598|PMID:14726497) RGD PMID:14726497 MGI:MGI:3037598 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
G Sftpa1 surfactant protein A1 ISO (PMID:21123169) RGD PMID:21123169 NCBI chr16:18,716,019...18,719,404
Ensembl chr16:18,716,019...18,719,403
JBrowse link
G Sftpd surfactant protein D IDA RGD PMID:19017984 RGD:4143523 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Spon2 spondin 2 ISO MGI:MGI:3026870 (MGI:MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034739.1 Ig lambda-2 chain C region IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:86,092,468...86,092,779 JBrowse link
G AABR07065640.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,506,718...138,507,294 JBrowse link
G AABR07065643.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,535,670...138,536,321 JBrowse link
G AABR07065645.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,549,564...138,550,576 JBrowse link
G AABR07065645.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,564,828...138,565,404 JBrowse link
G AABR07065651.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,735,742...138,736,203 JBrowse link
G AABR07065651.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,772,045...138,772,894 JBrowse link
G AABR07065651.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,764,502...138,764,901 JBrowse link
G AABR07065651.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,631,604...138,631,997 JBrowse link
G AABR07065651.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,679,089...138,679,665 JBrowse link
G AABR07065651.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,744,049...138,744,480 JBrowse link
G AABR07065651.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,639,759...138,640,187 JBrowse link
G AABR07065651.8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,685,363...138,685,656 JBrowse link
G AABR07065656.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,040,963...139,041,812 JBrowse link
G AABR07065656.10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,908,677...138,909,105 JBrowse link
G AABR07065656.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,948,007...138,948,583 JBrowse link
G AABR07065656.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,900,522...138,900,915 JBrowse link
G AABR07065656.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,004,388...139,004,983 JBrowse link
G AABR07065656.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,012,967...139,102,378 JBrowse link
G AABR07065656.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,033,420...139,033,819 JBrowse link
G AABR07065656.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,953,951...138,954,741 JBrowse link
G AABR07065656.8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,930,633...138,931,429 JBrowse link
G AABR07065656.9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,852,141...138,852,571 JBrowse link
G AABR07065673.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,158,334...139,158,765 JBrowse link
G AABR07065676.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,177,200...139,177,631 JBrowse link
G AABR07065680.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,209,936...139,210,367 JBrowse link
G AABR07065684.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,293,130...139,293,926 JBrowse link
G AABR07065688.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,345,486...139,345,914 JBrowse link
G AABR07065693.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,412,169...139,412,745 JBrowse link
G AABR07065693.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,428,999...139,429,783 JBrowse link
G AABR07065693.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,405,966...139,406,844 JBrowse link
G AABR07065699.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,560,028...139,560,489 JBrowse link
G AABR07065699.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,531,330...139,531,729 JBrowse link
G AABR07065699.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,551,751...139,552,182 JBrowse link
G AABR07065699.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,486,775...139,487,576 JBrowse link
G AABR07065699.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,523,337...139,524,186 JBrowse link
G AABR07065705.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,636,594...139,637,354 JBrowse link
G AABR07065705.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,746,888...139,747,737 JBrowse link
G AABR07065705.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,718,892...139,719,323 JBrowse link
G AABR07065705.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,654,077...139,654,508 JBrowse link
G AABR07065714.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,783,839...139,911,839 JBrowse link
G AABR07065737.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,972,140...139,973,811 JBrowse link
G AABR07065740.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,997,178...139,997,537 JBrowse link
G AABR07065750.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,215,386...140,216,072 JBrowse link
G AABR07065750.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,101,861...140,102,325 JBrowse link
G AABR07065753.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,266,079...140,266,507 JBrowse link
G AABR07065768.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,485,452...140,485,913 JBrowse link
G AABR07065768.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,416,650...140,418,831 JBrowse link
G AABR07065768.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,406,876...140,407,307 JBrowse link
G AABR07065772.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,571,595...140,572,023 JBrowse link
G AABR07065772.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,641,757...140,642,221 JBrowse link
G AABR07065772.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,585,071...140,587,251 JBrowse link
G AABR07065773.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,714,676...140,715,174 JBrowse link
G AABR07065774.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,805,046...140,805,551 JBrowse link
G AABR07065776.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,833,610...140,834,159 JBrowse link
G AABR07065776.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,879,774...140,880,070 JBrowse link
G AABR07065778.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,979,710...140,980,193 JBrowse link
G AABR07065778.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,008,140...141,008,427 JBrowse link
G AABR07065778.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,062,124...141,062,581 JBrowse link
G AABR07065781.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,146,719...141,147,264 JBrowse link
G AABR07065782.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,198,248...141,198,565 JBrowse link
G AABR07065789.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,290,922...141,291,347 JBrowse link
G AABR07065789.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,364,359...141,365,198 JBrowse link
G AABR07065789.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,320,809...141,321,108 JBrowse link
G AABR07065790.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,383,872...141,384,305 JBrowse link
G AABR07065792.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,487,555...141,488,290 JBrowse link
G AABR07065792.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,472,292...141,472,746 JBrowse link
G AABR07065798.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,715,354...141,715,846 JBrowse link
G AABR07065802.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,831,336...141,831,632 JBrowse link
G AABR07065804.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,866,364...141,866,756 JBrowse link
G AABR07065808.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,957,036...141,957,537 JBrowse link
G AABR07065811.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,059,736...142,060,032 JBrowse link
G AABR07065812.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,251,680...142,251,976 JBrowse link
G AABR07065812.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,177,345...142,178,771 JBrowse link
G AABR07065813.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,299,568...142,299,996 JBrowse link
G AABR07065814.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,418,316...142,418,800 JBrowse link
G AABR07065814.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,352,806...142,353,308 JBrowse link
G AABR07065814.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,371,639...142,372,031 JBrowse link
G AABR07065814.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,533,676...142,534,112 JBrowse link
G AABR07065814.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,479,319...142,479,939 JBrowse link
G AABR07065814.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,385,310...142,385,773 JBrowse link
G AABR07065815.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,584,754...142,585,188 JBrowse link
G AABR07065815.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,635,329...142,676,432 JBrowse link
G AABR07065821.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,791,766...142,880,382 JBrowse link
G AABR07065823.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,992,767...142,993,147 JBrowse link
G AABR07065823.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,932,678...142,933,110 JBrowse link
G AABR07065823.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,903,147...142,903,440 JBrowse link
G AABR07065827.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,065,206...143,065,639 JBrowse link
G AABR07065834.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,130,685...143,131,118 JBrowse link
G AABR07065837.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,194,515...143,195,445 JBrowse link
G AABR07065839.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,206,479...143,206,772 JBrowse link
G AABR07065844.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,228,835...143,230,111 JBrowse link
G AABR07065877.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,536,737...143,537,030 JBrowse link
G AABR07065883.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,590,014...143,590,448 JBrowse link
G AABR07065886.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,701,600...143,702,033 JBrowse link
G AABR07065889.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,768,677...143,768,985 JBrowse link
G Abca1 ATP binding cassette subfamily A member 1 ISO MGI:MGI:1935192 (MGI:MGI:1860694|PMID:10878804) RGD PMID:10878804 MGI:MGI:1860694 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G AC109737.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:70,828,894...70,830,344 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:5908515|PMID:26838550) RGD PMID:26838550 MGI:MGI:5908515 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Aif1 allograft inflammatory factor 1 ISO
ISS
(MGI:MGI:5315376|PMID:10934045)
GO_REF:0000024
RGD
UniProt
PMID:10934045 GO_REF:0000024, MGI:MGI:5315376 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448
JBrowse link
G Arhgap12 Rho GTPase activating protein 12 ISO (PMID:26465210) RGD PMID:26465210 NCBI chr17:54,280,815...54,394,716
Ensembl chr17:54,280,851...54,394,634
JBrowse link
G Arhgap25 Rho GTPase activating protein 25 ISO
IBA
(PMID:26465210)
PMID:21873635
RGD PMID:26465210, PMID:21873635 RGD:13792537 NCBI chr 4:119,249,682...119,327,822
Ensembl chr 4:119,249,682...119,327,822
JBrowse link
G Bin2 bridging integrator 2 ISO
IBA
(PMID:23285027)
PMID:21873635
RGD PMID:23285027, PMID:21873635 RGD:13792537 NCBI chr 7:142,273,832...142,304,731
Ensembl chr 7:142,273,833...142,300,382
JBrowse link
G Cdc42 cell division cycle 42 ISO
ISS
(PMID:26465210)
GO_REF:0000024
RGD
UniProt
PMID:26465210 GO_REF:0000024 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:MGI:2447864 (MGI:MGI:3663198|PMID:16522634) RGD PMID:16522634 MGI:MGI:3663198 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Dppa1 developmental pluripotency associated 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,693,219...31,712,924
Ensembl chr10:31,693,219...31,712,924
JBrowse link
G Elmo1 engulfment and cell motility 1 ISO UniProtKB:P46108|UniProtKB:Q14185 (PMID:11595183) RGD PMID:11595183 NCBI chr17:46,352,102...46,888,788
Ensembl chr17:46,353,330...46,794,845
JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig ISO MGI:MGI:1857165|MGI:MGI:2384004 (MGI:MGI:2177393|PMID:11901193), (MGI:MGI:2679189|PMID:11911823), (MGI:MGI:2683721|PMID:11237803) RGD PMID:11237803, PMID:11901193, PMID:11911823 MGI:MGI:2177393, MGI:MGI:2679189, MGI:MGI:2683721 NCBI chr13:89,601,894...89,606,326
Ensembl chr13:89,601,896...89,606,326
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia ISO MGI:MGI:2664927|MGI:MGI:2679238 (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823) RGD PMID:9551950, PMID:11911823, PMID:11911824 MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO MGI:MGI:1861924 (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481, PMID:9743367, PMID:9834201 MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481 MGI:MGI:82508 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Gsn gelsolin ISO (MGI:MGI:5619440|PMID:23325791) RGD PMID:23325791 MGI:MGI:5619440 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Gulp1 GULP PTB domain containing engulfment adaptor 1 ISO (PMID:11729193) RGD PMID:11729193 NCBI chr 9:51,263,484...51,538,066
Ensembl chr 9:51,263,622...51,538,072
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18414680, PMID:21873635 RGD:2316597, RGD:13792537 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379
JBrowse link
G IgG-2a gamma-2a immunoglobulin heavy chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igh-6 immunoglobulin heavy chain 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,092,131...138,093,643 JBrowse link
G Ighe immunoglobulin heavy constant epsilon IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 ISO
IBA
(MGI:MGI:2177393|PMID:11901193), (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823), (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481)
PMID:21873635
RGD PMID:8769481, PMID:9551950, PMID:9743367, PMID:9834201, PMID:11901193, PMID:11911823, PMID:11911824, PMID:21873635 MGI:MGI:2177393, MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189, MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508, RGD:13792537 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218
JBrowse link
G Ighm immunoglobulin heavy constant mu IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Igkc immunoglobulin kappa constant IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,388,378...88,391,524
Ensembl chr11:88,388,378...88,391,370
JBrowse link
G Itgam integrin subunit alpha M ISO (MGI:MGI:5319446|PMID:22438044), (MGI:MGI:5905548|PMID:20199584), (MGI:MGI:6189359|PMID:22632727) RGD PMID:20199584, PMID:22438044, PMID:22632727 MGI:MGI:5319446, MGI:MGI:5905548, MGI:MGI:6189359 NCBI chr 1:199,495,312...199,545,738
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Itgb2 integrin subunit beta 2 ISO (MGI:MGI:5905548|PMID:20199584) RGD PMID:20199584 MGI:MGI:5905548 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G LOC100359530 rCG21044-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,930,894...138,931,525 JBrowse link
G LOC100359684 mCG114411-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,406,777...140,407,357 JBrowse link
G LOC100359777 mCG12681-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,603,613...31,620,449
Ensembl chr10:31,603,613...31,620,443
JBrowse link
G LOC100360344 hypothetical protein LOC100360344 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,292,970...139,293,665 JBrowse link
G LOC100360436 hypothetical LOC100360436 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,345,463...139,346,007 JBrowse link
G LOC100360761 rCG64219-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,979,689...140,980,243 JBrowse link
G LOC100361105 Igh protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:141,146,691...141,147,268 JBrowse link
G LOC100361706 lambda-chain C1-region-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,094,822...86,096,399
Ensembl chr11:86,094,567...86,096,397
JBrowse link
G LOC100361945 mCG129376-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,486,687...139,487,301 JBrowse link
G LOC100365649 hypothetical LOC100365649 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,743,974...138,744,542 JBrowse link
G LOC100911906 uncharacterized LOC100911906 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,954,101...138,954,839 JBrowse link
G LOC362795 immunoglobulin G heavy chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,192,156...138,201,560 JBrowse link
G LOC689968 similar to kidney injury molecule 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,647,519...31,661,204
Ensembl chr10:31,647,898...31,661,344
JBrowse link
G LOC691815 Ig heavy chain V region PJ14-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,714,720...140,715,176 JBrowse link
G Marco macrophage receptor with collagenous structure IMP PMID:15987691 ARUK-UCL PMID:15987691 RGD:13432286 NCBI chr16:85,115,199...85,147,683
Ensembl chr16:85,115,201...85,135,859
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing ISO
IEA
(MGI:MGI:2681272|PMID:12000961)
GO_REF:0000107
RGD
Ensembl
PMID:12000961 GO_REF:0000107, MGI:MGI:2681272 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G Msr1 macrophage scavenger receptor 1 ISO UniProtKB:P01027|UniProtKB:P05555 (MGI:MGI:5319446|PMID:22438044) RGD PMID:22438044 MGI:MGI:5319446 NCBI chr16:56,817,714...56,900,025
Ensembl chr16:56,813,791...56,900,052
JBrowse link
G Myh9 myosin, heavy chain 9 ISO (MGI:MGI:5619440|PMID:23325791) RGD PMID:23325791 MGI:MGI:5619440 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:5315376|PMID:10934045) RGD PMID:10934045 MGI:MGI:5315376 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G RGD1564318 similar to immunoglobulin light chain variable region IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Sh3bp1 SH3-domain binding protein 1 ISO
ISS
(PMID:26465210)
GO_REF:0000024
RGD
UniProt
PMID:26465210 GO_REF:0000024 NCBI chr 7:120,125,747...120,138,148
Ensembl chr 7:120,125,633...120,138,196
JBrowse link
G Sirpa signal-regulatory protein alpha ISO
IEA
(MGI:MGI:2680858|PMID:14634079)
GO_REF:0000107
RGD
Ensembl
PMID:14634079 GO_REF:0000107, MGI:MGI:2680858 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,755,473...31,796,423
Ensembl chr10:31,755,510...31,790,263
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:3830759|PMID:19155473), (MGI:MGI:5606096|PMID:24990881) RGD PMID:19155473, PMID:24990881 MGI:MGI:3830759, MGI:MGI:5606096 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 ISO (MGI:MGI:3830759|PMID:19155473) RGD PMID:19155473 MGI:MGI:3830759 NCBI chr 9:14,668,691...14,707,122
Ensembl chr 9:14,685,900...14,706,557
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 IDA PMID:15133481 UniProt PMID:15133481 RGD:4892614 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
phagocytosis, recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034739.1 Ig lambda-2 chain C region IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:86,092,468...86,092,779 JBrowse link
G AABR07065640.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,506,718...138,507,294 JBrowse link
G AABR07065643.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,535,670...138,536,321 JBrowse link
G AABR07065645.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,549,564...138,550,576 JBrowse link
G AABR07065645.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,564,828...138,565,404 JBrowse link
G AABR07065651.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,735,742...138,736,203 JBrowse link
G AABR07065651.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,772,045...138,772,894 JBrowse link
G AABR07065651.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,764,502...138,764,901 JBrowse link
G AABR07065651.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,631,604...138,631,997 JBrowse link
G AABR07065651.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,679,089...138,679,665 JBrowse link
G AABR07065651.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,744,049...138,744,480 JBrowse link
G AABR07065651.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,639,759...138,640,187 JBrowse link
G AABR07065651.8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,685,363...138,685,656 JBrowse link
G AABR07065656.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,040,963...139,041,812 JBrowse link
G AABR07065656.10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,908,677...138,909,105 JBrowse link
G AABR07065656.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,948,007...138,948,583 JBrowse link
G AABR07065656.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,900,522...138,900,915 JBrowse link
G AABR07065656.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,004,388...139,004,983 JBrowse link
G AABR07065656.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,012,967...139,102,378 JBrowse link
G AABR07065656.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,033,420...139,033,819 JBrowse link
G AABR07065656.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,953,951...138,954,741 JBrowse link
G AABR07065656.8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,930,633...138,931,429 JBrowse link
G AABR07065656.9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,852,141...138,852,571 JBrowse link
G AABR07065673.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,158,334...139,158,765 JBrowse link
G AABR07065676.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,177,200...139,177,631 JBrowse link
G AABR07065680.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,209,936...139,210,367 JBrowse link
G AABR07065684.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,293,130...139,293,926 JBrowse link
G AABR07065688.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,345,486...139,345,914 JBrowse link
G AABR07065693.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,412,169...139,412,745 JBrowse link
G AABR07065693.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,428,999...139,429,783 JBrowse link
G AABR07065693.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,405,966...139,406,844 JBrowse link
G AABR07065699.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,560,028...139,560,489 JBrowse link
G AABR07065699.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,531,330...139,531,729 JBrowse link
G AABR07065699.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,551,751...139,552,182 JBrowse link
G AABR07065699.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,486,775...139,487,576 JBrowse link
G AABR07065699.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,523,337...139,524,186 JBrowse link
G AABR07065705.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,636,594...139,637,354 JBrowse link
G AABR07065705.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,746,888...139,747,737 JBrowse link
G AABR07065705.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,718,892...139,719,323 JBrowse link
G AABR07065705.6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,654,077...139,654,508 JBrowse link
G AABR07065714.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,783,839...139,911,839 JBrowse link
G AABR07065737.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,972,140...139,973,811 JBrowse link
G AABR07065740.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,997,178...139,997,537 JBrowse link
G AABR07065750.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,215,386...140,216,072 JBrowse link
G AABR07065750.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,101,861...140,102,325 JBrowse link
G AABR07065753.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,266,079...140,266,507 JBrowse link
G AABR07065768.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,485,452...140,485,913 JBrowse link
G AABR07065768.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,416,650...140,418,831 JBrowse link
G AABR07065768.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,406,876...140,407,307 JBrowse link
G AABR07065772.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,571,595...140,572,023 JBrowse link
G AABR07065772.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,641,757...140,642,221 JBrowse link
G AABR07065772.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,585,071...140,587,251 JBrowse link
G AABR07065773.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,714,676...140,715,174 JBrowse link
G AABR07065774.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,805,046...140,805,551 JBrowse link
G AABR07065776.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,833,610...140,834,159 JBrowse link
G AABR07065776.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,879,774...140,880,070 JBrowse link
G AABR07065778.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,979,710...140,980,193 JBrowse link
G AABR07065778.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,008,140...141,008,427 JBrowse link
G AABR07065778.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,062,124...141,062,581 JBrowse link
G AABR07065781.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,146,719...141,147,264 JBrowse link
G AABR07065782.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,198,248...141,198,565 JBrowse link
G AABR07065789.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,290,922...141,291,347 JBrowse link
G AABR07065789.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,364,359...141,365,198 JBrowse link
G AABR07065789.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,320,809...141,321,108 JBrowse link
G AABR07065790.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,383,872...141,384,305 JBrowse link
G AABR07065792.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,487,555...141,488,290 JBrowse link
G AABR07065792.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,472,292...141,472,746 JBrowse link
G AABR07065798.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,715,354...141,715,846 JBrowse link
G AABR07065802.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,831,336...141,831,632 JBrowse link
G AABR07065804.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,866,364...141,866,756 JBrowse link
G AABR07065808.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,957,036...141,957,537 JBrowse link
G AABR07065811.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,059,736...142,060,032 JBrowse link
G AABR07065812.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,251,680...142,251,976 JBrowse link
G AABR07065812.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,177,345...142,178,771 JBrowse link
G AABR07065813.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,299,568...142,299,996 JBrowse link
G AABR07065814.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,418,316...142,418,800 JBrowse link
G AABR07065814.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,352,806...142,353,308 JBrowse link
G AABR07065814.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,371,639...142,372,031 JBrowse link
G AABR07065814.4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,533,676...142,534,112 JBrowse link
G AABR07065814.5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,479,319...142,479,939 JBrowse link
G AABR07065814.7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,385,310...142,385,773 JBrowse link
G AABR07065815.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,584,754...142,585,188 JBrowse link
G AABR07065815.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,635,329...142,676,432 JBrowse link
G AABR07065821.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,791,766...142,880,382 JBrowse link
G AABR07065823.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,992,767...142,993,147 JBrowse link
G AABR07065823.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,932,678...142,933,110 JBrowse link
G AABR07065823.3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,903,147...142,903,440 JBrowse link
G AABR07065827.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,065,206...143,065,639 JBrowse link
G AABR07065834.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,130,685...143,131,118 JBrowse link
G AABR07065837.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,194,515...143,195,445 JBrowse link
G AABR07065839.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,206,479...143,206,772 JBrowse link
G AABR07065844.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,228,835...143,230,111 JBrowse link
G AABR07065877.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,536,737...143,537,030 JBrowse link
G AABR07065883.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,590,014...143,590,448 JBrowse link
G AABR07065886.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,701,600...143,702,033 JBrowse link
G AABR07065889.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,768,677...143,768,985 JBrowse link
G AC109737.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:70,828,894...70,830,344 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:4939876|PMID:21245295) RGD PMID:21245295 MGI:MGI:4939876 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Cd36 CD36 molecule ISO (MGI:MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Clec4m C-type lectin domain family 4 member M ISO (MGI:MGI:3027358|PMID:14707091) RGD PMID:14707091 MGI:MGI:3027358 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378
JBrowse link
G Clec7a C-type lectin domain containing 7A ISO
IBA
(PMID:11567029)
PMID:21873635
RGD PMID:11567029, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Colec12 collectin sub-family member 12 ISO
ISS
(PMID:11564734)
GO_REF:0000024
RGD
UniProt
PMID:11564734 GO_REF:0000024 NCBI chr18:867,048...1,054,047
Ensembl chr18:867,048...1,052,606
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia ISO MGI:MGI:2664927|MGI:MGI:2679238 (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823) RGD PMID:9551950, PMID:11911823, PMID:11911824 MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO MGI:MGI:1861924 (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481, PMID:9743367, PMID:9834201 MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G IgG-2a gamma-2a immunoglobulin heavy chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igh-6 immunoglobulin heavy chain 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,092,131...138,093,643 JBrowse link
G Ighe immunoglobulin heavy constant epsilon IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 ISO
IBA
(MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823), (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481)
PMID:21873635
RGD PMID:8769481, PMID:9551950, PMID:9743367, PMID:9834201, PMID:11911823, PMID:11911824, PMID:21873635 MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189, MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508, RGD:13792537 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218
JBrowse link
G Ighm immunoglobulin heavy constant mu IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Igkc immunoglobulin kappa constant IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,388,378...88,391,524
Ensembl chr11:88,388,378...88,391,370
JBrowse link
G LOC100359530 rCG21044-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,930,894...138,931,525 JBrowse link
G LOC100359684 mCG114411-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,406,777...140,407,357 JBrowse link
G LOC100360344 hypothetical protein LOC100360344 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,292,970...139,293,665 JBrowse link
G LOC100360436 hypothetical LOC100360436 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,345,463...139,346,007 JBrowse link
G LOC100360761 rCG64219-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,979,689...140,980,243 JBrowse link
G LOC100361105 Igh protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:141,146,691...141,147,268 JBrowse link
G LOC100361706 lambda-chain C1-region-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,094,822...86,096,399
Ensembl chr11:86,094,567...86,096,397
JBrowse link
G LOC100361945 mCG129376-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,486,687...139,487,301 JBrowse link
G LOC100365649 hypothetical LOC100365649 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,743,974...138,744,542 JBrowse link
G LOC100911906 uncharacterized LOC100911906 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,954,101...138,954,839 JBrowse link
G LOC362795 immunoglobulin G heavy chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,192,156...138,201,560 JBrowse link
G LOC691815 Ig heavy chain V region PJ14-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,714,720...140,715,176 JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing ISO
IEA
(MGI:MGI:2681272|PMID:12000961)
GO_REF:0000107
RGD
Ensembl
PMID:12000961 GO_REF:0000107, MGI:MGI:2681272 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G RGD1564318 similar to immunoglobulin light chain variable region IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Scarb1 scavenger receptor class B, member 1 IMP RGD PMID:12016218 RGD:1304245 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Sirpa signal-regulatory protein alpha ISO
IEA
(MGI:MGI:2680858|PMID:14634079)
GO_REF:0000107
RGD
Ensembl
PMID:14634079 GO_REF:0000107, MGI:MGI:2680858 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Tub TUB bipartite transcription factor ISO MGI:MGI:1861349 (MGI:MGI:4441109|PMID:19837063), (MGI:MGI:4867371|PMID:20978472) RGD PMID:19837063, PMID:20978472 MGI:MGI:4441109, MGI:MGI:4867371 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550
JBrowse link
G Tulp1 TUB like protein 1 ISO MGI:MGI:1859921 (MGI:MGI:4441109|PMID:19837063), (MGI:MGI:4867371|PMID:20978472) RGD PMID:19837063, PMID:20978472 MGI:MGI:4441109, MGI:MGI:4867371 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
phagolysosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A ISO (PMID:12132654) RGD PMID:12132654 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:2155422 (MGI:MGI:2662763|PMID:12743369) RGD PMID:12743369 MGI:MGI:2662763 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:MGI:3606250 (MGI:MGI:3699774|PMID:11544318) RGD PMID:11544318 MGI:MGI:3699774 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Srpx sushi-repeat-containing protein, X-linked ISO MGI:MGI:3706175 (MGI:MGI:3852261|PMID:19368996) RGD PMID:19368996 MGI:MGI:3852261 NCBI chr  X:14,146,618...14,220,756
Ensembl chr  X:14,150,038...14,220,662
JBrowse link
phagolysosome assembly involved in apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab14 RAB14, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:14,373,270...14,395,357
Ensembl chr 3:14,373,275...14,395,362
JBrowse link
phagosome-lysosome docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:MGI:5698740 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
phagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07037545.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:23,416,395...23,417,122 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:MGI:5698740 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ISO
IEA
(PMID:28779020)
(MGI:MGI:6103777|PMID:28779020)
GO_REF:0000107
RGD
Ensembl
PMID:28779020 GO_REF:0000107, MGI:MGI:6103777 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Pla2g5 phospholipase A2, group V ISS
ISO
GO_REF:0000024
(MGI:MGI:3841317|PMID:19342668)
UniProt
RGD
PMID:19342668 GO_REF:0000024, MGI:MGI:3841317 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
G Rab20 RAB20, member RAS oncogene family ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:83,358,116...83,382,326
Ensembl chr16:83,358,116...83,382,326
JBrowse link
G Rab34 RAB34, member RAS oncogene family ISO
IBA
ISS
(MGI:MGI:5467668|PMID:23197834)
PMID:21873635
GO_REF:0000024
(PMID:21255211)
RGD
UniProt
PMID:21255211, PMID:23197834, PMID:21873635 GO_REF:0000024, MGI:MGI:5467668, RGD:13792537 NCBI chr10:65,448,111...65,452,178
Ensembl chr10:65,448,950...65,452,177
JBrowse link
G Rab39a RAB39A, member RAS oncogene family ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:58,275,984...58,292,995
Ensembl chr 8:58,272,098...58,293,102
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO
IBA
ISS
(PMID:21255211)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21255211, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rab7b Rab7b, member RAS oncogene family IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:48,456,143...48,483,714
Ensembl chr13:48,455,923...48,482,138
JBrowse link
G Syt7 synaptotagmin 7 ISO
ISS
(MGI:MGI:3690533|PMID:16982801)
GO_REF:0000024
RGD
UniProt
PMID:16982801 GO_REF:0000024, MGI:MGI:3690533 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link
G Tmem175 transmembrane protein 175 ISO
ISS
(MGI:MGI:5693670|PMID:26317472)
GO_REF:0000024
RGD
UniProt
PMID:26317472 GO_REF:0000024, MGI:MGI:5693670 NCBI chr14:2,083,745...2,100,006
Ensembl chr14:2,083,712...2,100,005
JBrowse link
phagosome-lysosome fusion involved in apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spg11 SPG11 vesicle trafficking associated, spatacsin ISO MGI:MGI:4377985 (MGI:MGI:5749311|PMID:26284655) RGD PMID:26284655 MGI:MGI:5749311 NCBI chr 3:113,999,600...114,064,438
Ensembl chr 3:113,999,719...114,065,170
JBrowse link
positive regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2 complement C2 ISO (PMID:19302245) RGD PMID:19302245 NCBI chr20:4,542,340...4,561,152
Ensembl chr20:4,542,340...4,561,152
JBrowse link
G C3 complement C3 ISO
IEA
(PMID:19302245)
GO_REF:0000107
RGD
Ensembl
PMID:19302245 GO_REF:0000107 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G C4a complement C4A ISO UniProtKB:P0C0L5 (PMID:19302245) RGD PMID:19302245 NCBI chr20:2,651,599...2,678,183
Ensembl chr20:2,651,599...2,678,141
JBrowse link
G C4b complement C4B (Chido blood group) ISO UniProtKB:P0C0L4|UniProtKB:P0C0L5 (PMID:19302245) RGD PMID:19302245 NCBI chr20:4,302,344...4,316,752
Ensembl chr20:4,302,344...4,316,715
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO (MGI:MGI:4943793|PMID:20691665) RGD PMID:20691665 MGI:MGI:4943793 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Cd300lf Cd300 molecule-like family member F ISS
ISO
GO_REF:0000024
(MGI:MGI:5301804|PMID:21865548), (MGI:MGI:5819329|PMID:26768664)
UniProt
RGD
PMID:21865548, PMID:26768664 GO_REF:0000024, MGI:MGI:5301804, MGI:MGI:5819329 NCBI chr10:103,669,781...103,690,584
Ensembl chr10:103,670,028...103,687,425
JBrowse link
positive regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 ISO
ISS
(MGI:MGI:3662940|PMID:16908670)
GO_REF:0000024
RGD
Alzheimers_University_of_Toronto
PMID:16908670 GO_REF:0000024, MGI:MGI:3662940 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (PMID:24990881) RGD PMID:24990881 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ISO (MGI:MGI:6271154|PMID:25568335) RGD PMID:25568335 MGI:MGI:6271154 NCBI chr 7:26,256,179...26,306,128
Ensembl chr 7:26,256,459...26,306,126
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO UniProtKB:Q64455 (MGI:MGI:3774343|PMID:18249142) RGD PMID:18249142 MGI:MGI:3774343 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J ISO UniProtKB:P06800 (MGI:MGI:3774343|PMID:18249142) RGD PMID:18249142 MGI:MGI:3774343 NCBI chr 3:79,233,519...79,390,956
Ensembl chr 3:79,233,525...79,390,956
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IMP RGD PMID:18832707 RGD:9835043 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 IMP RGD PMID:18832707 RGD:9835043 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
positive regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo18a myosin XVIIIa ISO
IEA
(PMID:21123169)
GO_REF:0000107
(MGI:MGI:5810257|PMID:21123169)
RGD
Ensembl
PMID:21123169 GO_REF:0000107, MGI:MGI:5810257 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535
JBrowse link
G Pla2g5 phospholipase A2, group V ISS
ISO
GO_REF:0000024
(MGI:MGI:3841317|PMID:19342668)
UniProt
RGD
PMID:19342668 GO_REF:0000024, MGI:MGI:3841317 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
positive regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006142.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:223,214,132...223,263,133 JBrowse link
G AABR07006691.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:248,428,099...248,463,139 JBrowse link
G AABR07008876.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:77,084,222...77,112,499 JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISS
ISO
GO_REF:0000024
(MGI:MGI:5553241|PMID:20495215), (MGI:MGI:6271506|PMID:27472885)
Alzheimers_University_of_Toronto
RGD
PMID:20495215, PMID:27472885 GO_REF:0000024, MGI:MGI:5553241, MGI:MGI:6271506 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abr ABR activator of RhoGEF and GTPase ISO
IEA
MGI:MGI:88141 (MGI:MGI:3698699|PMID:17116687)
GO_REF:0000107
RGD
Ensembl
PMID:17116687 GO_REF:0000107, MGI:MGI:3698699 NCBI chr10:64,565,121...64,657,079
Ensembl chr10:64,567,268...64,657,089
JBrowse link
G Ahsg alpha-2-HS-glycoprotein ISO
ISS
(PMID:12725640)
GO_REF:0000024
RGD
UniProt
PMID:12725640 GO_REF:0000024 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Apoa1 apolipoprotein A1 ISS
ISO
GO_REF:0000024
(PMID:20495215)
UniProt
RGD
PMID:20495215 GO_REF:0000024 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISS
ISO
GO_REF:0000024
(PMID:20495215)
UniProt
RGD
PMID:20495215 GO_REF:0000024 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO MGI:MGI:107771 (MGI:MGI:3698699|PMID:17116687) RGD PMID:17116687 MGI:MGI:3698699 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G C3 complement C3 ISO MGI:MGI:1861799 (MGI:MGI:2177393|PMID:11901193) RGD PMID:11901193 MGI:MGI:2177393 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G Calr calreticulin ISO (MGI:MGI:3813433|PMID:17187072) RGD PMID:17187072 MGI:MGI:3813433 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Camk1d calcium/calmodulin-dependent protein kinase ID ISO (PMID:15840691) RGD PMID:15840691 NCBI chr17:76,532,611...76,938,956
Ensembl chr17:76,532,611...76,938,956
JBrowse link
G Cd36 CD36 molecule IMP RGD PMID:23238794 RGD:8696010 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd47 Cd47 molecule ISO
IBA
IEA
IMP
(MGI:MGI:2680858|PMID:14634079)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:14634079, PMID:21873635, PMID:23238794 GO_REF:0000107, MGI:MGI:2680858, RGD:13792537, RGD:8696010 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
G Clec4m C-type lectin domain family 4 member M ISO (MGI:MGI:3027358|PMID:14707091) RGD PMID:14707091 MGI:MGI:3027358 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378
JBrowse link
G Clec7a C-type lectin domain containing 7A ISO
IBA
(PMID:19358895)
PMID:21873635
RGD PMID:19358895, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Cyba cytochrome b-245 alpha chain ISO (PMID:22423966) RGD PMID:22423966 NCBI chr19:55,249,634...55,257,824
Ensembl chr19:55,249,616...55,257,876
JBrowse link
G Dnm2 dynamin 2 IMP RGD PMID:12802072 RGD:9685290 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Dock2 dedicator of cytokinesis 2 ISO (MGI:MGI:5291858|PMID:21892172) RGD PMID:21892172 MGI:MGI:5291858 NCBI chr10:19,181,512...19,603,171 JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig ISO
IBA
MGI:MGI:1857165|MGI:MGI:2384004 (MGI:MGI:2177393|PMID:11901193), (MGI:MGI:2679189|PMID:11911823), (MGI:MGI:2683721|PMID:11237803)
PMID:21873635
RGD PMID:11237803, PMID:11901193, PMID:11911823, PMID:21873635 MGI:MGI:2177393, MGI:MGI:2679189, MGI:MGI:2683721, RGD:13792537 NCBI chr13:89,601,894...89,606,326
Ensembl chr13:89,601,896...89,606,326
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia ISO MGI:MGI:2664927|MGI:MGI:2679238 (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823) RGD PMID:9551950, PMID:11911823, PMID:11911824 MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO MGI:MGI:1861924 (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481, PMID:9743367, PMID:9834201 MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481 MGI:MGI:82508 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fpr2 formyl peptide receptor 2 ISO (PMID:25505240) RGD PMID:25505240 NCBI chr 1:59,800,558...59,809,507
Ensembl chr 1:59,800,984...59,802,401
JBrowse link
G Gas6 growth arrest specific 6 ISO
ISS
(PMID:18395422)
GO_REF:0000024
RGD
UniProt
PMID:18395422 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Gata2 GATA binding protein 2 IDA PMID:12933836 UniProt PMID:12933836 RGD:632788 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IMP RGD PMID:9886410 RGD:10059405 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:4454469|PMID:20368278) RGD PMID:20368278 MGI:MGI:4454469 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 ISO (MGI:MGI:2177393|PMID:11901193), (MGI:MGI:2664488|PMID:11911824), (MGI:MGI:2679188|PMID:9551950), (MGI:MGI:2679189|PMID:11911823), (MGI:MGI:2683747|PMID:9834201), (MGI:MGI:2683749|PMID:9743367), (MGI:MGI:82508|PMID:8769481) RGD PMID:8769481, PMID:9551950, PMID:9743367, PMID:9834201, PMID:11901193, PMID:11911823, PMID:11911824 MGI:MGI:2177393, MGI:MGI:2664488, MGI:MGI:2679188, MGI:MGI:2679189, MGI:MGI:2683747, MGI:MGI:2683749, MGI:MGI:82508 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218
JBrowse link
G Il15 interleukin 15 ISS
ISO
GO_REF:0000024
(PMID:15123770)
UniProt
RGD
PMID:15123770 GO_REF:0000024 NCBI chr19:23,542,606...23,624,366
Ensembl chr19:23,542,889...23,554,594
JBrowse link
G Il15ra interleukin 15 receptor subunit alpha ISO (PMID:15123770) RGD PMID:15123770 NCBI chr17:70,451,861...70,481,838
Ensembl chr17:70,451,411...70,481,750
JBrowse link
G Il1b interleukin 1 beta ISO
IEA
(PMID:18201371)
GO_REF:0000107
RGD
Ensembl
PMID:18201371 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il2rb interleukin 2 receptor subunit beta ISS
ISO
IEA
GO_REF:0000024
(PMID:15123770)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15123770 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:119,701,338...119,716,238
Ensembl chr 7:119,701,251...119,716,238
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma ISO (PMID:15123770) RGD PMID:15123770 NCBI chr  X:71,165,378...71,169,078
Ensembl chr  X:71,162,585...71,169,865
JBrowse link
G Itgb2 integrin subunit beta 2 ISO (PMID:25453580) RGD PMID:25453580 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Lman2 lectin, mannose-binding 2 ISO (PMID:22016386)
(MGI:MGI:5574292|PMID:22016386)
RGD PMID:22016386 MGI:MGI:5574292 NCBI chr17:9,798,136...9,815,820
Ensembl chr17:9,797,907...9,816,139
JBrowse link
G LOC100909879 tyrosine-protein phosphatase non-receptor type substrate 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:87,418,425...87,419,918
Ensembl chr 2:87,418,517...87,419,861
JBrowse link
G LOC100909964 tyrosine-protein phosphatase non-receptor type substrate 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:27,643,286...27,676,536
Ensembl chr13:27,645,677...27,653,839
JBrowse link
G LOC100909977 leukocyte surface antigen CD47-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:54,137,648...54,201,948
Ensembl chr11:54,137,639...54,190,184
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:19299462 RGD:13800552 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Lyar Ly1 antibody reactive ISO
IEA
ISS
(MGI:MGI:6107438|PMID:25735755)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25735755 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6107438 NCBI chr14:77,308,211...77,321,931
Ensembl chr14:77,308,204...77,321,977
JBrowse link
G Mbl1 mannose binding lectin 1 ISO MGI:MGI:96924 (MGI:MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:MGI:3577322 NCBI chr16:18,736,154...18,742,193
Ensembl chr16:18,736,154...18,742,193
JBrowse link
G Mbl2 mannose binding lectin 2 ISO MGI:MGI:96923 (MGI:MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:MGI:3577322 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO
IDA
(PMID:18395422) RGD PMID:18395422, PMID:11592982 RGD:69668 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444
JBrowse link
G Mex3b mex-3 RNA binding family member B ISO MGI:MGI:5638674 (MGI:MGI:5585359|PMID:24803656) RGD PMID:24803656 MGI:MGI:5585359 NCBI chr 1:144,831,523...144,835,758
Ensembl chr 1:144,831,523...144,835,747
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing ISO
IEA
(MGI:MGI:2681272|PMID:12000961)
GO_REF:0000107
RGD
Ensembl
PMID:12000961 GO_REF:0000107, MGI:MGI:2681272 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:19117932 RGD:6902913 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:3529594 (MGI:MGI:3839525|PMID:19139201) RGD PMID:19139201 MGI:MGI:3839525 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Pla2g5 phospholipase A2, group V ISS
ISO
GO_REF:0000024
(MGI:MGI:3639848|PMID:16407308)
UniProt
RGD
PMID:16407308 GO_REF:0000024, MGI:MGI:3639848 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
G Pros1 protein S IDA RGD PMID:15949798 RGD:2300013 NCBI chr 7:1,206,648...1,288,140
Ensembl chr 7:1,206,648...1,288,134
JBrowse link
G Ptk2 protein tyrosine kinase 2 IMP RGD PMID:12912913 RGD:1299194 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:MGI:3037598|PMID:14726497) RGD PMID:14726497 MGI:MGI:3037598 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
G Pycard PYD and CARD domain containing ISO (MGI:MGI:5291858|PMID:21892172) RGD PMID:21892172 MGI:MGI:5291858 NCBI chr 1:199,438,029...199,439,062
Ensembl chr 1:199,437,832...199,439,210
JBrowse link
G Rab27a RAB27A, member RAS oncogene family ISO (PMID:24404184) RGD PMID:24404184 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221
JBrowse link
G Rap1gap Rap1 GTPase-activating protein ISO (MGI:MGI:5585359|PMID:24803656) RGD PMID:24803656 MGI:MGI:5585359 NCBI chr 5:156,008,868...156,074,350
Ensembl chr 5:156,026,911...156,074,395
JBrowse link
G Sftpa1 surfactant protein A1 IDA RGD PMID:15187139 RGD:4144050 NCBI chr16:18,716,019...18,719,404
Ensembl chr16:18,716,019...18,719,403
JBrowse link
G Sftpd surfactant protein D IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15591410, PMID:21873635 RGD:4144046, RGD:13792537 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Sirpa signal-regulatory protein alpha ISO
IBA
IEA
(MGI:MGI:2680858|PMID:14634079)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:14634079, PMID:21873635 GO_REF:0000107, MGI:MGI:2680858, RGD:13792537 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Sirpd signal-regulatory protein delta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:76,694,107...76,941,002
Ensembl chr 2:76,923,591...76,940,969
JBrowse link
G Slc11a1 solute carrier family 11 member 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2446573 (MGI:MGI:3807860|PMID:18456389), (MGI:MGI:3839054|PMID:18984740)
Ensembl
RGD
PMID:18456389, PMID:18984740 GO_REF:0000107, MGI:MGI:3807860, MGI:MGI:3839054 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Sod1 superoxide dismutase 1 ISO RNAcentral:URS0000021B51_10090 (MGI:MGI:6271924|PMID:25381879) RGD PMID:25381879 MGI:MGI:6271924 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:18201371) RGD PMID:18201371 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tub TUB bipartite transcription factor ISO
ISS
(PMID:19837063)
GO_REF:0000024
RGD
UniProt
PMID:19837063 GO_REF:0000024 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:19837063) RGD PMID:19837063 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
positive regulation of phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:23238794 RGD:8696010 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Ano6 anoctamin 6 ISO (MGI:MGI:5634870|PMID:25651887) RGD PMID:25651887 MGI:MGI:5634870 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ISO (MGI:MGI:6271154|PMID:25568335) RGD PMID:25568335 MGI:MGI:6271154 NCBI chr 7:26,256,179...26,306,128
Ensembl chr 7:26,256,459...26,306,126
JBrowse link
G C3 complement C3 IEA
ISO
GO_REF:0000107
UniProtKB:P05555 (MGI:MGI:5319446|PMID:22438044), (MGI:MGI:5905548|PMID:20199584), (MGI:MGI:6189359|PMID:22632727)
Ensembl
RGD
PMID:20199584, PMID:22438044, PMID:22632727 GO_REF:0000107, MGI:MGI:5319446, MGI:MGI:5905548, MGI:MGI:6189359 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G Cd36 CD36 molecule ISO MGI:MGI:2447190 (MGI:MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia IMP RGD PMID:19657115 RGD:9685698 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Gata2 GATA binding protein 2 IMP RGD PMID:12933836 RGD:632788 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:9284952 RGD:2307413 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Lbp lipopolysaccharide binding protein IDA RGD PMID:11104656 RGD:9685187 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Nckap1l NCK associated protein 1 like ISO
ISS
(MGI:MGI:3818191|PMID:19015308)
GO_REF:0000024
RGD
UniProt
PMID:19015308 GO_REF:0000024, MGI:MGI:3818191 NCBI chr 7:145,068,239...145,113,507
Ensembl chr 7:145,068,286...145,113,507
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:15940641 RGD:8553017 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Rab31 RAB31, member RAS oncogene family ISS
ISO
GO_REF:0000024
(MGI:MGI:6271154|PMID:25568335)
UniProt
RGD
PMID:25568335 GO_REF:0000024, MGI:MGI:6271154 NCBI chr 9:113,370,072...113,504,606
Ensembl chr 9:113,370,033...113,504,605
JBrowse link
G Stap1 signal transducing adaptor family member 1 ISO (MGI:MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:MGI:3831067 NCBI chr14:23,575,400...23,604,984
Ensembl chr14:23,576,085...23,604,834
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (PMID:28855300)
(MGI:MGI:6304666|PMID:25631124)
RGD PMID:25631124, PMID:28855300 MGI:MGI:6304666 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
recognition of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Fcnb ficolin B ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO MGI:MGI:2686850 (MGI:MGI:1855743|PMID:10811223), (MGI:MGI:2682078|PMID:14645847) RGD PMID:10811223, PMID:14645847 MGI:MGI:1855743, MGI:MGI:2682078 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
JBrowse link
G Megf10 multiple EGF-like domains 10 ISO (MGI:MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:MGI:4414741 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Pear1 platelet endothelial aggregation receptor 1 ISO (MGI:MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:MGI:4414741 NCBI chr 2:187,114,219...187,134,209
Ensembl chr 2:187,114,217...187,133,993
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
ISS
IDA
(PMID:9211901)
GO_REF:0000024
PMID:12016218
RGD
BHF-UCL
PMID:9211901, PMID:12016218 GO_REF:0000024, RGD:1304245 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase ISS
ISO
GO_REF:0000024
(MGI:MGI:5436199|PMID:22503541), (MGI:MGI:5508294|PMID:11278875)
UniProt
RGD
PMID:11278875, PMID:22503541 GO_REF:0000024, MGI:MGI:5436199, MGI:MGI:5508294 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2a Fc fragment of IgG receptor IIa IMP RGD PMID:22184119, PMID:16482158 RGD:11041001, RGD:2293335 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4bpa complement component 4 binding protein, alpha IEA
ISO
GO_REF:0000107
(PMID:22333221)
Ensembl
RGD
PMID:22333221 GO_REF:0000107 NCBI chr13:47,342,090...47,377,580
Ensembl chr13:47,342,079...47,377,703
JBrowse link
G C4bpb complement component 4 binding protein, beta IEA
ISO
GO_REF:0000107
(PMID:22333221)
Ensembl
RGD
PMID:22333221 GO_REF:0000107 NCBI chr13:47,387,173...47,398,115
Ensembl chr13:47,387,173...47,397,890
JBrowse link
regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO
ISS
(MGI:MGI:3640451|PMID:11672534)
GO_REF:0000024
RGD
UniProt
PMID:11672534 GO_REF:0000024, MGI:MGI:3640451 NCBI chr 5:151,172,189...151,199,746
Ensembl chr 5:151,172,206...151,199,745
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO
ISS
(PMID:11904303)
GO_REF:0000024
RGD
UniProt
PMID:11904303 GO_REF:0000024 NCBI chr 3:148,579,917...148,623,026
Ensembl chr 3:148,579,920...148,623,033
JBrowse link
G Itgav integrin subunit alpha V ISO (PMID:10570297) RGD PMID:10570297 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Olfm4 olfactomedin 4 NOT ISO (PMID:23922742) RGD PMID:23922742 NCBI chr15:62,384,263...62,429,450
Ensembl chr15:62,406,873...62,429,449
JBrowse link
G Pot1b protection of telomeres 1B IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Prkcg protein kinase C, gamma ISO (MGI:MGI:3037226|PMID:15006698) RGD PMID:15006698 MGI:MGI:3037226 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO (PMID:12100025) RGD PMID:12100025 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Scarb1 scavenger receptor class B, member 1 TAS
IDA
RGD PMID:10026214, PMID:12016218 RGD:1304217, RGD:1304245 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Sphk1 sphingosine kinase 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6158194|PMID:29662056)
UniProt
RGD
PMID:29662056 GO_REF:0000024, MGI:MGI:6158194 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
G Syk spleen associated tyrosine kinase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4414596|PMID:19797524)
Ensembl
UniProt
RGD
PMID:19797524 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4414596 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
G Syt7 synaptotagmin 7 ISO
ISS
(MGI:MGI:3690533|PMID:16982801)
GO_REF:0000024
RGD
UniProt
PMID:16982801 GO_REF:0000024, MGI:MGI:3690533 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      vesicle-mediated transport 1673
        phagocytosis 350
          apoptotic cell clearance + 52
          immune response-regulating cell surface receptor signaling pathway involved in phagocytosis + 10
          negative regulation of phagocytosis + 27
          opsonization + 9
          phagocytosis, engulfment + 180
          phagocytosis, recognition + 134
          phagolysosome assembly + 17
          positive regulation of phagocytosis + 85
          regulation of phagocytosis + 118
Path 2
Term Annotations click to browse term
  biological_process 20027
    localization 6496
      establishment of localization 4911
        transport 4759
          vesicle-mediated transport 1673
            phagocytosis 350
              apoptotic cell clearance + 52
              immune response-regulating cell surface receptor signaling pathway involved in phagocytosis + 10
              negative regulation of phagocytosis + 27
              opsonization + 9
              phagocytosis, engulfment + 180
              phagocytosis, recognition + 134
              phagolysosome assembly + 17
              positive regulation of phagocytosis + 85
              regulation of phagocytosis + 118
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.