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ONTOLOGY REPORT - ANNOTATIONS


Term:substrate-dependent cell migration
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Accession:GO:0006929 term browser browse the term
Definition:The orderly movement of a cell from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate.
Synonyms:exact_synonym: substrate-bound cell migration


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substrate-dependent cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A JBrowse link 20 7,484,550 7,636,498 RGD:1624291
G Cspg4 chondroitin sulfate proteoglycan 4 JBrowse link 8 61,532,465 61,567,510 RGD:1600115
RGD:1624291
G Epha8 Eph receptor A8 JBrowse link 5 155,293,731 155,321,016 RGD:1600115
RGD:1624291
G Fmnl1 formin-like 1 JBrowse link 10 91,253,757 91,281,422 RGD:1624291
G Itga11 integrin subunit alpha 11 JBrowse link 8 67,566,874 67,683,973 RGD:1624291
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:1624291
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
G Ston1 stonin 1 JBrowse link 6 12,332,465 12,379,783 RGD:1624291
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Robo1 roundabout guidance receptor 1 JBrowse link 11 9,079,291 10,146,302 RGD:1600115
RGD:1624291
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:1600115
RGD:1624291
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:2325172
negative regulation of cell adhesion involved in substrate-bound cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:1624291
RGD:1600115
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Ptprc protein tyrosine phosphatase, receptor type, C JBrowse link 13 55,061,561 55,174,150 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
positive regulation of fibronectin-dependent thymocyte migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
positive regulation of substrate-dependent cell migration, cell attachment to substrate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbln1 fibulin 1 JBrowse link 7 126,096,793 126,176,468 RGD:1624291
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1600115
RGD:1624291
G Stk4 serine/threonine kinase 4 JBrowse link 3 160,467,552 160,546,540 RGD:1624291
substrate-dependent cell migration, cell attachment to substrate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 13 35,622,472 35,673,449 RGD:1624291
G Spag6l sperm associated antigen 6-like JBrowse link 11 88,424,493 88,517,910 RGD:1624291
G Tnfrsf12a TNF receptor superfamily member 12A JBrowse link 10 12,995,904 12,997,930 RGD:1624291
substrate-dependent cell migration, cell contraction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link 4 176,806,098 176,928,540 RGD:728123
substrate-dependent cell migration, cell extension term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase JBrowse link 13 74,154,533 74,333,244 RGD:1624291
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:1624291
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1624291
RGD:1600115
G Nck1 NCK adaptor protein 1 JBrowse link 8 108,787,797 108,847,779 RGD:1624291
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
G Ntn1 netrin 1 JBrowse link 10 54,761,925 54,982,072 RGD:10054078
G P2ry12 purinergic receptor P2Y12 JBrowse link 2 149,440,807 149,482,592 RGD:1624291
RGD:1600115
G Shtn1 shootin 1 JBrowse link 1 280,129,228 280,233,873 RGD:10054078

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    locomotion 1912
      cell motility 1726
        cell migration 1551
          substrate-dependent cell migration 31
            extracellular matrix-dependent thymocyte migration + 1
            negative regulation of cell adhesion involved in substrate-bound cell migration + 4
            substrate-dependent cell migration, cell attachment to substrate + 6
            substrate-dependent cell migration, cell contraction 1
            substrate-dependent cell migration, cell extension 8
            substrate-dependent cerebral cortex tangential migration + 3
Path 2
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      movement of cell or subcellular component 2162
        cell motility 1726
          cell migration 1551
            substrate-dependent cell migration 31
              extracellular matrix-dependent thymocyte migration + 1
              negative regulation of cell adhesion involved in substrate-bound cell migration + 4
              substrate-dependent cell migration, cell attachment to substrate + 6
              substrate-dependent cell migration, cell contraction 1
              substrate-dependent cell migration, cell extension 8
              substrate-dependent cerebral cortex tangential migration + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.