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ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle contraction
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Accession:GO:0006939 term browser browse the term
Definition:A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.
Synonyms:exact_synonym: visceral muscle contraction


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smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin TAS RGD PMID:7624319 RGD:61542 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Bdkrb2 bradykinin receptor B2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:129,399,468...129,429,676
Ensembl chr 6:129,399,468...129,429,676
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO MGI:MGI:2389040|MGI:MGI:2674119 (MGI:MGI:3653822|PMID:16636102) RGD PMID:16636102 MGI:MGI:3653822 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 ISO MGI:MGI:1888740 (MGI:MGI:1888655|PMID:10944224) RGD PMID:10944224 MGI:MGI:1888655 NCBI chr17:63,990,599...64,463,222
Ensembl chr17:63,990,599...63,994,169
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:MGI:87892 (MGI:MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:MGI:2156010 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit ISO MGI:MGI:87891 (MGI:MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:MGI:2156010 NCBI chr 8:59,610,489...59,629,073
Ensembl chr 8:59,609,693...59,629,133
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO MGI:MGI:2182644 (MGI:MGI:3028710|PMID:14592808) RGD PMID:14592808 MGI:MGI:3028710 NCBI chr 6:29,975,863...29,987,252
Ensembl chr 6:29,977,797...29,987,451
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778
JBrowse link
G LOC103694905 5-hydroxytryptamine receptor 7 IEA GO_REF:0000002 InterPro GO_REF:0000002
G Myh11 myosin heavy chain 11 ISO MGI:MGI:2656492|MGI:MGI:3576856 (MGI:MGI:2655877|PMID:10854329), (MGI:MGI:3576700|PMID:11715025), (MGI:MGI:3615070|PMID:12562924) RGD PMID:10854329, PMID:11715025, PMID:12562924 MGI:MGI:2655877, MGI:MGI:3576700, MGI:MGI:3615070 NCBI chr10:764,421...859,184
Ensembl chr10:764,421...859,184
JBrowse link
G Mylk myosin light chain kinase ISO
IBA
(MGI:MGI:3820013|PMID:18586037)
PMID:21873635
RGD PMID:18586037, PMID:21873635 MGI:MGI:3820013, RGD:13792537 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
G Nmur1 neuromedin U receptor 1 ISO
IEA
(PMID:10899166)
GO_REF:0000107
RGD
Ensembl
PMID:10899166 GO_REF:0000107 NCBI chr 9:93,402,871...93,407,264
Ensembl chr 9:93,403,314...93,404,883
JBrowse link
G Pde4b phosphodiesterase 4B NOT ISO MGI:MGI:2181444 (MGI:MGI:2677650|PMID:14519662) RGD PMID:14519662 MGI:MGI:2677650 NCBI chr 5:121,759,236...122,136,814
Ensembl chr 5:121,952,977...122,136,814
JBrowse link
G Pde4d phosphodiesterase 4D ISO
IEA
MGI:MGI:2451168 (MGI:MGI:2677650|PMID:14519662)
GO_REF:0000107
RGD
Ensembl
PMID:14519662 GO_REF:0000107, MGI:MGI:2677650 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (MGI:MGI:4838733|PMID:20547763) RGD PMID:20547763 MGI:MGI:4838733 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link
artery smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21076237 RGD:5129195 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO MGI:MGI:3521669 (MGI:MGI:4867605|PMID:20852044) RGD PMID:20852044 MGI:MGI:4867605 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G IMP RGD PMID:18759855 RGD:2308879 NCBI chr10:82,129,071...82,197,828
Ensembl chr10:82,129,506...82,197,848
JBrowse link
G Cd38 CD38 molecule IMP RGD PMID:21431168 RGD:13506923 NCBI chr14:71,714,768...71,754,990
Ensembl chr14:71,715,269...71,754,672
JBrowse link
G Edn1 endothelin 1 ISO
IDA
(PMID:8982507) RGD PMID:8982507, PMID:7586220 RGD:8662314 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Edn2 endothelin 2 ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr 5:139,098,472...139,106,396
Ensembl chr 5:139,100,898...139,105,792
JBrowse link
G Edn3 endothelin 3 NOT ISO (PMID:8982507) RGD PMID:8982507 NCBI chr 3:172,856,730...172,879,276
Ensembl chr 3:172,856,733...172,880,450
JBrowse link
G Ednra endothelin receptor type A ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703
JBrowse link
G Grip2 glutamate receptor interacting protein 2 ISO MGI:MGI:3035933 (MGI:MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:MGI:5609934 NCBI chr 4:123,585,184...123,636,040
Ensembl chr 4:123,586,231...123,636,040
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:14752059 RGD:7257678 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Mkks McKusick-Kaufman syndrome ISO MGI:MGI:3526444 (MGI:MGI:4867605|PMID:20852044) RGD PMID:20852044 MGI:MGI:4867605 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta ISO
IEA
MGI:MGI:2179831 (MGI:MGI:4356406|PMID:19553501)
GO_REF:0000107
RGD
Ensembl
PMID:19553501 GO_REF:0000107, MGI:MGI:4356406 NCBI chr 1:191,829,547...191,883,991
Ensembl chr 1:191,829,555...191,884,298
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:19088082 RGD:10042965 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
esophagus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sulf1 sulfatase 1 ISO
IEA
ISS
UniProtKB:Q8CFG0 (MGI:MGI:3722747|PMID:17720696)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:17720696 GO_REF:0000024, GO_REF:0000104, MGI:MGI:3722747 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Sulf2 sulfatase 2 ISO UniProtKB:Q8K007 (MGI:MGI:3722747|PMID:17720696) RGD PMID:17720696 MGI:MGI:3722747 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr1d 5-hydroxytryptamine receptor 1D ISO (PMID:9186750) RGD PMID:9186750 NCBI chr 5:154,780,958...154,801,505
Ensembl chr 5:154,800,226...154,801,350
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B IEA
ISO
ISS
GO_REF:0000107
(PMID:7599919), (PMID:9186750)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:7599919, PMID:9186750 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:93,112,781...93,130,135
Ensembl chr 9:93,112,805...93,125,014
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:24170253, PMID:21873635 RGD:10043193, RGD:13792537 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Tacr2 tachykinin receptor 2 IMP RGD PMID:11275010 RGD:5147481 NCBI chr20:31,892,515...31,905,153
Ensembl chr20:31,892,515...31,905,153
JBrowse link
negative regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IMP RGD PMID:23647678 RGD:10412032 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:11991626 RGD:10003093 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
negative regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18306009 RGD:5129131 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO
IBA
IEA
MGI:MGI:88398|MGI:MGI:98496 (MGI:MGI:2672939|PMID:12925702)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12925702, PMID:21873635 GO_REF:0000107, MGI:MGI:2672939, RGD:13792537 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Calca calcitonin-related polypeptide alpha IMP
ISO
(MGI:MGI:1098356|PMID:9322931) RGD PMID:9322931, PMID:11230364 MGI:MGI:1098356, RGD:68890 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Calcrl calcitonin receptor like receptor IMP RGD PMID:17363466 RGD:1625357 NCBI chr 3:71,747,938...71,845,487
Ensembl chr 3:71,747,956...71,845,232
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 ISO MGI:MGI:3525059 (MGI:MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:MGI:3512693 NCBI chr 1:175,681,960...175,804,737
Ensembl chr 1:175,681,960...175,796,040
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:1934143 (MGI:MGI:3771783|PMID:17993584) RGD PMID:17993584 MGI:MGI:3771783 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO MGI:MGI:2181586 (MGI:MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:MGI:3512693 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:21051526 RGD:5135055 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
negative regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A IMP RGD PMID:17664026 RGD:6893570 NCBI chr 1:274,766,283...274,769,083
Ensembl chr 1:274,766,283...274,769,081
JBrowse link
G Adra2c adrenoceptor alpha 2C IMP RGD PMID:17664026 RGD:6893570 NCBI chr14:80,730,307...80,732,010
Ensembl chr14:80,730,307...80,732,010
JBrowse link
negative regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap42 Rho GTPase activating protein 42 ISO MGI:MGI:3871380 (MGI:MGI:5638847|PMID:24335996) RGD PMID:24335996 MGI:MGI:5638847 NCBI chr 8:7,210,999...7,446,215
Ensembl chr 8:7,213,822...7,426,611
JBrowse link
G Dock4 dedicator of cytokinesis 4 ISO (PMID:22158624) RGD PMID:22158624 NCBI chr 6:60,374,839...60,782,648
Ensembl chr 6:60,566,196...60,782,556
JBrowse link
G Dock5 dedicator of cytokinesis 5 ISO (PMID:22158624) RGD PMID:22158624 NCBI chr15:44,449,108...44,627,774
Ensembl chr15:44,453,308...44,627,765
JBrowse link
peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO MGI:MGI:2183545 (MGI:MGI:1313232|PMID:9788961) RGD PMID:9788961 MGI:MGI:1313232 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO
IEA
MGI:MGI:3699270 (MGI:MGI:3699022|PMID:17172448)
GO_REF:0000107
RGD
Ensembl
PMID:17172448 GO_REF:0000107, MGI:MGI:3699022 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Drd1 dopamine receptor D1 ISO
IEA
MGI:MGI:94924 (MGI:MGI:3050733|PMID:15272078)
GO_REF:0000107
RGD
Ensembl
PMID:15272078 GO_REF:0000107, MGI:MGI:3050733 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:MGI:2388386|MGI:MGI:99578 (MGI:MGI:3050733|PMID:15272078), (MGI:MGI:3617964|PMID:16525059) RGD PMID:15272078, PMID:16525059 MGI:MGI:3050733, MGI:MGI:3617964 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Gdnf glial cell derived neurotrophic factor IEA
ISO
ISS
GO_REF:0000107
MGI:MGI:2136846 (MGI:MGI:2157194|PMID:11774071), (MGI:MGI:81287|PMID:8657307)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8657307, PMID:11774071 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2157194, MGI:MGI:81287 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IMP RGD PMID:12919938 RGD:1642317 NCBI chr16:24,779,480...24,789,131
Ensembl chr16:24,779,477...24,788,740
JBrowse link
G P2rx2 purinergic receptor P2X 2 ISO
IEA
MGI:MGI:2687349 (MGI:MGI:3615722|PMID:12937291)
GO_REF:0000107
RGD
Ensembl
PMID:12937291 GO_REF:0000107, MGI:MGI:3615722 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G P2rx3 purinergic receptor P2X 3 ISO MGI:MGI:1934019 (MGI:MGI:3614934|PMID:12813150) RGD PMID:12813150 MGI:MGI:3614934 NCBI chr 3:72,403,992...72,447,801
Ensembl chr 3:72,403,993...72,447,801
JBrowse link
G Sstr2 somatostatin receptor 2 IMP RGD PMID:12504886 RGD:727490 NCBI chr10:102,136,283...102,143,449
Ensembl chr10:102,136,283...102,143,434
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
positive regulation of colon smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:17322067 RGD:12910822 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:24170253 RGD:10043193 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
positive regulation of gastro-intestinal system smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 RGD:12907565 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Spx spexin hormone ISO
IBA
ISS
(PMID:17284679)
PMID:21873635
RGD PMID:17284679, PMID:21873635, PMID:17284679 RGD:13792537, RGD:12907558 NCBI chr 4:176,629,597...176,635,698
Ensembl chr 4:176,629,800...176,641,008
JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19258489 RGD:2304084 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:14724155 RGD:9835340 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
positive regulation of pyloric antrum smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:9832052 RGD:12910753 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
positive regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336, PMID:21874246 RGD:12907565, RGD:12910732 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246, PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:7542218 RGD:12910748 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
positive regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI:MGI:1857117|MGI:MGI:2683027 (MGI:MGI:3794903|PMID:18340377) RGD PMID:18340377 MGI:MGI:3794903 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Adra1a adrenoceptor alpha 1A IMP
ISO
(MGI:MGI:4947862|PMID:21335239) RGD PMID:21335239, PMID:19041301 MGI:MGI:4947862, RGD:5688345 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 ISO (MGI:MGI:2672939|PMID:12925702) RGD PMID:12925702 MGI:MGI:2672939 NCBI chr17:63,990,599...64,463,222
Ensembl chr17:63,990,599...63,994,169
JBrowse link
G Cttn cortactin ISO UniProtKB:P07737 (PMID:24700464) RGD PMID:24700464 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Edn1 endothelin 1 IDA
ISO
IMP
(MGI:MGI:66444|PMID:8010105) RGD PMID:8010105, PMID:12396026, PMID:8893723 MGI:MGI:66444, RGD:1581797, RGD:8662282 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Edn2 endothelin 2 IDA
IEA
ISO
GO_REF:0000107
(MGI:MGI:65983|PMID:2768235)
Ensembl
RGD
PMID:2768235, PMID:12396026 GO_REF:0000107, MGI:MGI:65983, RGD:1581797 NCBI chr 5:139,098,472...139,106,396
Ensembl chr 5:139,100,898...139,105,792
JBrowse link
G F2r coagulation factor II (thrombin) receptor IDA RGD PMID:14699501 RGD:1582292 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G Itga2 integrin subunit alpha 2 IMP SMC-containing collagen lattice contraction RGD PMID:16263112 RGD:2307398 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Myocd myocardin ISO
IEA
(PMID:17215356)
GO_REF:0000107
RGD
Ensembl
PMID:17215356 GO_REF:0000107 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Nmu neuromedin U IMP
IBA
IDA
PMID:21873635
PMID:3178840
RGD
GO_Central
UniProt
PMID:16474416, PMID:21873635, PMID:3178840 RGD:1642122, RGD:13792537, RGD:13461757 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
G Npnt nephronectin ISO
IEA
(MGI:MGI:4947862|PMID:21335239)
GO_REF:0000107
RGD
Ensembl
PMID:21335239 GO_REF:0000107, MGI:MGI:4947862 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IMP neuropeptide Y- and peptide YY-induced contraction in ascending and descending colon RGD PMID:10422644 RGD:1642606 NCBI chr 2:181,528,949...181,538,145
Ensembl chr 2:181,530,832...181,531,978
JBrowse link
G Prok2 prokineticin 2 IEA
ISO
GO_REF:0000107
(PMID:11259612)
Ensembl
RGD
PMID:11259612 GO_REF:0000107 NCBI chr 4:132,157,556...132,171,244
Ensembl chr 4:132,157,556...132,171,153
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IMP RGD PMID:18480553 RGD:2300247 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:18480553 RGD:2300247 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:17379756 RGD:1642962 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Sphk1 sphingosine kinase 1 ISO
IEA
(PMID:12847068)
GO_REF:0000107
RGD
Ensembl
PMID:12847068 GO_REF:0000107 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
G Srf serum response factor ISO (PMID:17215356) RGD PMID:17215356 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tbxa2r thromboxane A2 receptor ISO (MGI:MGI:2672939|PMID:12925702) RGD PMID:12925702 MGI:MGI:2672939 NCBI chr 7:11,253,153...11,259,233
Ensembl chr 7:11,253,180...11,257,977
JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
positive regulation of stomach fundus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U IDA PMID:2055247 UniProt PMID:2055247 RGD:13461751 NCBI chr14:34,353,683...34,381,968
Ensembl chr14:34,354,503...34,381,828
JBrowse link
positive regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12742000 RGD:10047059 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:19634638, PMID:17664026 RGD:2313546, RGD:6893570 NCBI chr 3:119,805,941...119,809,987
Ensembl chr 3:119,805,941...119,809,987
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21427217)
Ensembl
UniProt
RGD
PMID:21427217 GO_REF:0000024, GO_REF:0000107 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase IMP RGD PMID:19208792 RGD:2316554 NCBI chr 5:147,750,976...147,779,627
Ensembl chr 5:147,750,973...147,761,983
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19164477 RGD:2303954 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:19164477 RGD:2303954 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Tacr1 tachykinin receptor 1 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Tacr2 tachykinin receptor 2 IDA RGD PMID:12390879 RGD:2305937 NCBI chr20:31,892,515...31,905,153
Ensembl chr20:31,892,515...31,905,153
JBrowse link
G Tacr3 tachykinin receptor 3 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 2:240,021,152...240,118,971
Ensembl chr 2:240,021,152...240,118,971
JBrowse link
positive regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor, muscarinic 3 IMP RGD PMID:8428203 RGD:2303387 NCBI chr17:63,990,599...64,463,222
Ensembl chr17:63,990,599...63,994,169
JBrowse link
G Rhoa ras homolog family member A ISO (MGI:MGI:5638847|PMID:24335996) RGD PMID:24335996 MGI:MGI:5638847 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:16873401 RGD:1625276 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO MGI:MGI:2451291 (MGI:MGI:3525892|PMID:14627611) RGD PMID:14627611 MGI:MGI:3525892 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Cav1 caveolin 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2180364 (MGI:MGI:3695200|PMID:16782699), (MGI:MGI:3707284|PMID:17098833)
Ensembl
RGD
PMID:16782699, PMID:17098833 GO_REF:0000107, MGI:MGI:3695200, MGI:MGI:3707284 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Chrm2 cholinergic receptor, muscarinic 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12185001, PMID:21873635 RGD:724728, RGD:13792537 NCBI chr 4:64,089,028...64,091,090
Ensembl chr 4:64,088,900...64,091,090
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO MGI:MGI:2155602 (MGI:MGI:1336857|PMID:10318955), (MGI:MGI:3607823|PMID:10771006) RGD PMID:10318955, PMID:10771006 MGI:MGI:1336857, MGI:MGI:3607823 NCBI chr 8:59,594,007...59,607,122
Ensembl chr 8:59,592,403...59,607,275
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit ISO MGI:MGI:2158716 (MGI:MGI:3607823|PMID:10771006) RGD PMID:10771006 MGI:MGI:3607823 NCBI chr 8:59,610,489...59,629,073
Ensembl chr 8:59,609,693...59,629,133
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IDA RGD PMID:12062723 RGD:1582498 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 ISO (MGI:MGI:5926671|PMID:28275141) RGD PMID:28275141 MGI:MGI:5926671 NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
JBrowse link
G P2rx1 purinergic receptor P2X 1 ISO MGI:MGI:2181608 (MGI:MGI:1351403|PMID:10638758), (MGI:MGI:3607802|PMID:11570704) RGD PMID:10638758, PMID:11570704 MGI:MGI:1351403, MGI:MGI:3607802 NCBI chr10:59,566,268...59,581,328
Ensembl chr10:59,566,223...59,581,325
JBrowse link
G Shc1 SHC adaptor protein 1 IMP RGD PMID:27270176 RGD:12792230 NCBI chr 2:188,745,503...188,757,066
Ensembl chr 2:188,745,503...188,757,066
JBrowse link
G Tnni3 troponin I3, cardiac type IMP RGD PMID:16236710 RGD:1580418 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd3 SET domain containing 3, actin histidine methyltransferase ISS
ISO
GO_REF:0000024
(MGI:MGI:6276231|PMID:30626964)
UniProt
RGD
PMID:30626964 GO_REF:0000024, MGI:MGI:6276231 NCBI chr 6:132,023,128...132,090,072
Ensembl chr 6:132,023,945...132,075,875
JBrowse link
G Tacr1 tachykinin receptor 1 ISO (MGI:MGI:5619483|PMID:15647454) RGD PMID:15647454 MGI:MGI:5619483 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Tacr2 tachykinin receptor 2 ISO (MGI:MGI:5619483|PMID:15647454) RGD PMID:15647454 MGI:MGI:5619483 NCBI chr20:31,892,515...31,905,153
Ensembl chr20:31,892,515...31,905,153
JBrowse link
regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:18054907 RGD:2313547 NCBI chr 3:119,805,941...119,809,987
Ensembl chr 3:119,805,941...119,809,987
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6282934|PMID:24805951)
UniProt
RGD
PMID:24805951 GO_REF:0000024, MGI:MGI:6282934 NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:63,990,599...64,463,222
Ensembl chr17:63,990,599...63,994,169
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP inhibition decreases both calcium-stimulated and unstimulated myogenic tone in middle cerebral arteries (p<0.001) RGD PMID:10198244 RGD:2293329 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G P2rx1 purinergic receptor P2X 1 ISO MGI:MGI:2181608 (MGI:MGI:3694186|PMID:16920810) RGD PMID:16920810 MGI:MGI:3694186 NCBI chr10:59,566,268...59,581,328
Ensembl chr10:59,566,223...59,581,325
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 ISO (MGI:MGI:5921050|PMID:26715683) RGD PMID:26715683 MGI:MGI:5921050 NCBI chr 5:100,924,621...100,983,412
Ensembl chr 5:100,924,622...100,977,902
JBrowse link
regulation of vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:31125290 RGD:14696717 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778
JBrowse link
relaxation of vascular associated smooth muscle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:19443947 RGD:2317917 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
G Adora2b adenosine A2B receptor ISO
IEA
MGI:MGI:3773754 (MGI:MGI:3794903|PMID:18340377)
GO_REF:0000107
RGD
Ensembl
PMID:18340377 GO_REF:0000107, MGI:MGI:3794903 NCBI chr10:48,569,563...48,586,366
Ensembl chr10:48,569,555...48,586,365
JBrowse link
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 ISO
IEA
MGI:MGI:3640802 (MGI:MGI:3640061|PMID:16614755)
GO_REF:0000107
RGD
Ensembl
PMID:16614755 GO_REF:0000107, MGI:MGI:3640061 NCBI chr 2:181,045,694...181,103,321
Ensembl chr 2:181,045,703...181,102,918
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 ISO MGI:MGI:3525059 (MGI:MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:MGI:3512693 NCBI chr 1:175,681,960...175,804,737
Ensembl chr 1:175,681,960...175,796,040
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO
IBA
MGI:MGI:3050114 (MGI:MGI:3695011|PMID:15867178)
PMID:21873635
(PMID:25139746)
RGD PMID:15867178, PMID:25139746, PMID:21873635 MGI:MGI:3695011, RGD:13792537 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO MGI:MGI:2181586 (MGI:MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:MGI:3512693 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Rgs2 regulator of G-protein signaling 2 ISO (MGI:MGI:2682081|PMID:14608379) RGD PMID:14608379 MGI:MGI:2682081 NCBI chr13:60,846,458...60,849,061
Ensembl chr13:60,846,308...60,849,094
JBrowse link
G Sod1 superoxide dismutase 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1857873 (MGI:MGI:2682495|PMID:14679182), (MGI:MGI:3625573|PMID:12433839)
UniProt
RGD
PMID:12433839, PMID:14679182 GO_REF:0000024, MGI:MGI:2682495, MGI:MGI:3625573 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 ISO (PMID:25139746) RGD PMID:25139746 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO MGI:MGI:2674119 (MGI:MGI:3699638|PMID:15132976) RGD PMID:15132976 MGI:MGI:3699638 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO
IEA
MGI:MGI:3053849 (MGI:MGI:3612609|PMID:15827347)
(PMID:11641143)
GO_REF:0000107
RGD
Ensembl
PMID:11641143, PMID:15827347 GO_REF:0000107, MGI:MGI:3612609 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO MGI:MGI:1934023 (MGI:MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:MGI:2385968 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:129,437,423...129,441,553
Ensembl chr 6:129,438,158...129,440,574
JBrowse link
G Pgr progesterone receptor ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
tonic smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk myosin light chain kinase ISO
IBA
(MGI:MGI:4452414|PMID:20018858)
PMID:21873635
RGD PMID:20018858, PMID:21873635 MGI:MGI:4452414, RGD:13792537 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
ureteric peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 ISO MGI:MGI:98495 (MGI:MGI:6284231|PMID:30478225) RGD PMID:30478225 MGI:MGI:6284231 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:98494 (MGI:MGI:6284231|PMID:30478225) RGD PMID:30478225 MGI:MGI:6284231 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 ISO (MGI:MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:MGI:3806378 NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975
JBrowse link
urinary bladder smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:3703409|PMID:16956963)
UniProt
RGD
PMID:16956963 GO_REF:0000024, MGI:MGI:3703409 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
G Bdkrb2 bradykinin receptor B2 ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:129,399,468...129,429,676
Ensembl chr 6:129,399,468...129,429,676
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:23274492 RGD:7257664 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:20969855 RGD:6480667 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778
JBrowse link
G P2rx2 purinergic receptor P2X 2 ISO
IEA
MGI:MGI:1097160|MGI:MGI:2687349 (MGI:MGI:3656422|PMID:15961431)
GO_REF:0000107
RGD
Ensembl
PMID:15961431 GO_REF:0000107, MGI:MGI:3656422 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G P2rx3 purinergic receptor P2X 3 ISO MGI:MGI:1934019|MGI:MGI:2665170 (MGI:MGI:1926735|PMID:11069181), (MGI:MGI:3656422|PMID:15961431) RGD PMID:11069181, PMID:15961431 MGI:MGI:1926735, MGI:MGI:3656422 NCBI chr 3:72,403,992...72,447,801
Ensembl chr 3:72,403,993...72,447,801
JBrowse link
G Pla2g6 phospholipase A2 group VI IMP RGD PMID:12750876 RGD:6482755 NCBI chr 7:120,519,479...120,559,716
Ensembl chr 7:120,519,467...120,559,347
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21367919 RGD:10043365 NCBI chr 5:3,783,247...3,836,485
Ensembl chr 5:3,783,247...3,836,485
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO MGI:MGI:1934023 (MGI:MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:MGI:2385968 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21401609 RGD:5129172 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle ISO
IEA
MGI:MGI:3665248 (MGI:MGI:3665239|PMID:11053242)
GO_REF:0000107
RGD
Ensembl
PMID:11053242 GO_REF:0000107, MGI:MGI:3665239 NCBI chr 1:252,537,614...252,550,394
Ensembl chr 1:252,537,615...252,550,394
JBrowse link
G Actg2 actin gamma 2, smooth muscle IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,215,160...115,239,746
Ensembl chr 4:115,215,060...115,239,723
JBrowse link
G Comp cartilage oligomeric matrix protein ISO
IEA
MGI:MGI:2180787 (MGI:MGI:5824640|PMID:27498005)
GO_REF:0000107
RGD
Ensembl
PMID:27498005 GO_REF:0000107, MGI:MGI:5824640 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 IMP RGD PMID:18348285 RGD:2314690 NCBI chr 2:244,258,550...244,370,983
Ensembl chr 2:244,258,550...244,370,983
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO (MGI:MGI:1927695|PMID:10967099) RGD PMID:10967099 MGI:MGI:1927695 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 ISO
IBA
(PMID:9422810)
PMID:21873635
RGD PMID:9422810, PMID:21873635 RGD:13792537 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Edn2 endothelin 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:8982507), (PMID:9422810)
Ensembl
RGD
PMID:8982507, PMID:9422810, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:139,098,472...139,106,396
Ensembl chr 5:139,100,898...139,105,792
JBrowse link
G Edn3 endothelin 3 ISO
IBA
(PMID:8982507)
PMID:21873635
RGD PMID:8982507, PMID:21873635 RGD:13792537 NCBI chr 3:172,856,730...172,879,276
Ensembl chr 3:172,856,733...172,880,450
JBrowse link
G Ednrb endothelin receptor type B ISO (PMID:8982507) RGD PMID:8982507 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      system process 3445
        muscle system process 459
          muscle contraction 334
            smooth muscle contraction 123
              colon smooth muscle contraction + 2
              gastro-intestinal system smooth muscle contraction + 14
              hindgut contraction + 3
              negative regulation of smooth muscle contraction + 23
              phasic smooth muscle contraction + 28
              positive regulation of smooth muscle contraction + 35
              regulation of smooth muscle contraction + 72
              small intestine smooth muscle contraction + 5
              tonic smooth muscle contraction + 15
              urinary tract smooth muscle contraction + 16
              uterine smooth muscle contraction + 13
              vascular associated smooth muscle contraction + 30
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.