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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to DNA damage stimulus
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Accession:GO:0006974 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
Synonyms:exact_synonym: DNA damage response;   cellular DNA damage response;   response to genotoxic stress
 broad_synonym: response to DNA damage stimulus
 alt_id: GO:0034984


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cellular response to DNA damage stimulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AATF apoptosis antagonizing transcription factor JBrowse link 17 36,948,954 37,056,871 RGD:2290271
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 9 130,713,881 130,887,675 RGD:2290271
G AC008575.1 novel protein RGD:2290271
G AC087632.2 novel protein RGD:2290271
G ACER2 alkaline ceramidase 2 JBrowse link 9 19,408,927 19,455,173 RGD:2290271
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:2290271
G AKTIP AKT interacting protein JBrowse link 16 53,491,040 53,504,411 RGD:2290271
G ALKBH7 alkB homolog 7 JBrowse link 19 6,372,794 6,375,250 RGD:2290271
G ALKBH8 alkB homolog 8, tRNA methyltransferase JBrowse link 11 107,502,726 107,565,737 RGD:2290271
G APBB1 amyloid beta precursor protein binding family B member 1 JBrowse link 11 6,395,124 6,419,453 RGD:2290271
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:2290271
G APLF aprataxin and PNKP like factor JBrowse link 2 68,467,585 68,580,162 RGD:2290271
G APTX aprataxin JBrowse link 9 32,883,872 33,025,120 RGD:2290271
G ARMT1 acidic residue methyltransferase 1 JBrowse link 6 151,452,258 151,470,101 RGD:2290271
G ASH2L ASH2 like, histone lysine methyltransferase complex subunit JBrowse link 8 38,104,965 38,140,080 RGD:2290271
G ATF2 activating transcription factor 2 JBrowse link 2 175,072,250 175,168,206 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G ATMIN ATM interactor JBrowse link 16 81,035,842 81,047,350 RGD:2290271
G ATR ATR serine/threonine kinase JBrowse link 3 142,449,235 142,578,793 RGD:2290271
G BABAM2 BRISC and BRCA1 A complex member 2 JBrowse link 2 27,888,709 28,338,901 RGD:2290271
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2 214,725,645 214,809,683 RGD:2290271
G BATF basic leucine zipper ATF-like transcription factor JBrowse link 14 75,522,469 75,546,992 RGD:2290271
G BAZ1B bromodomain adjacent to zinc finger domain 1B JBrowse link 7 73,440,406 73,522,293 RGD:2290271
G BBC3 BCL2 binding component 3 JBrowse link 19 47,220,822 47,232,998 RGD:2290271
G BCCIP BRCA2 and CDKN1A interacting protein JBrowse link 10 125,823,546 125,853,695 RGD:2290271
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:2290271
G BCL3 BCL3 transcription coactivator JBrowse link 19 44,742,620 44,760,044 RGD:2290271
G BCL6 BCL6 transcription repressor JBrowse link 3 187,721,377 187,745,472 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 JBrowse link 4 13,568,738 13,627,725 RGD:2290271
G BPHL biphenyl hydrolase like JBrowse link 6 3,118,376 3,153,599 RGD:2290271
G BRAT1 BRCA1 associated ATM activator 1 JBrowse link 7 2,537,810 2,555,753 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRD4 bromodomain containing 4 JBrowse link 19 15,236,836 15,332,539 RGD:2290271
G BRSK1 BR serine/threonine kinase 1 JBrowse link 19 55,283,997 55,312,562 RGD:2290271
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 203,305,519 203,309,602 RGD:2290271
G C9orf116 chromosome 9 open reading frame 116 JBrowse link 9 135,495,181 135,499,869 RGD:2290271
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:2290271
G CASP9 caspase 9 JBrowse link 1 15,491,401 15,524,912 RGD:2290271
G CBL Cbl proto-oncogene JBrowse link 11 119,206,339 119,308,149 RGD:2290271
G CBX1 chromobox 1 JBrowse link 17 48,070,059 48,101,478 RGD:2290271
G CBX3 chromobox 3 JBrowse link 7 26,201,443 26,213,607 RGD:2290271
G CBX5 chromobox 5 JBrowse link 12 54,230,942 54,280,122 RGD:2290271
G CCAR2 cell cycle and apoptosis regulator 2 JBrowse link 8 22,604,740 22,621,514 RGD:2290271
G CCDC13 coiled-coil domain containing 13 JBrowse link 3 42,704,118 42,773,253 RGD:2290271
G CCND1 cyclin D1 JBrowse link 11 69,641,156 69,654,474 RGD:2290271
G CCNK cyclin K JBrowse link 14 99,481,409 99,512,440 RGD:2290271
G CDK3 cyclin dependent kinase 3 JBrowse link 17 76,000,906 76,005,999 RGD:2290271
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 6 36,676,463 36,687,332 RGD:2290271
G CDKN2AIP CDKN2A interacting protein JBrowse link 4 183,444,636 183,449,064 RGD:2290271
G CENPS centromere protein S JBrowse link 1 10,430,433 10,442,808 RGD:2290271
G CENPS-CORT CENPS-CORT readthrough JBrowse link 1 10,430,433 10,452,153 RGD:2290271
G CGAS cyclic GMP-AMP synthase JBrowse link 6 73,423,711 73,452,297 RGD:2290271
G CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6 JBrowse link 3 126,704,240 126,960,420 RGD:2290271
G CHD1L chromodomain helicase DNA binding protein 1 like JBrowse link 1 147,172,747 147,295,766 RGD:2290271
G CHD2 chromodomain helicase DNA binding protein 2 JBrowse link 15 92,900,324 93,027,996 RGD:2290271
G CHEK1 checkpoint kinase 1 JBrowse link 11 125,624,910 125,676,256 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G CIB1 calcium and integrin binding 1 JBrowse link 15 90,229,975 90,265,759 RGD:2290271
G CTC1 CST telomere replication complex component 1 JBrowse link 17 8,224,815 8,248,079 RGD:2290271
G CTLA4 cytotoxic T-lymphocyte associated protein 4 JBrowse link 2 203,867,771 203,873,965 RGD:2290271
G CUL4A cullin 4A JBrowse link 13 113,208,193 113,267,108 RGD:2290271
G CUL4B cullin 4B JBrowse link X 120,523,858 120,575,829 RGD:2290271
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 61,299,451 61,333,105 RGD:2290271
G DDIT3 DNA damage inducible transcript 3 JBrowse link 12 57,516,588 57,520,517 RGD:2290271
G DDX11 DEAD/H-box helicase 11 JBrowse link 12 31,073,860 31,104,799 RGD:2290271
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 212,035,553 212,105,013 RGD:2290271
G DTX3L deltex E3 ubiquitin ligase 3L JBrowse link 3 122,564,338 122,575,203 RGD:2290271
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 12 67,648,745 67,665,406 RGD:2290271
G EGLN3 egl-9 family hypoxia inducible factor 3 JBrowse link 14 33,924,227 33,951,074 RGD:2290271
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 5 60,866,454 60,945,078 RGD:2290271
G ETAA1 ETAA1 activator of ATR kinase JBrowse link 2 67,397,317 67,412,089 RGD:2290271
G FAAP20 FA core complex associated protein 20 JBrowse link 1 2,184,457 2,212,720 RGD:2290271
G FANCF FA complementation group F JBrowse link 11 22,622,533 22,625,823 RGD:2290271
G FANCG FA complementation group G JBrowse link 9 35,073,839 35,079,942 RGD:2290271
G FANCL FA complementation group L JBrowse link 2 58,159,243 58,241,681 RGD:2290271
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,889,572 5,937,595 RGD:2290271
G FBXO31 F-box protein 31 JBrowse link 16 87,326,987 87,392,121 RGD:2290271
G FBXO45 F-box protein 45 JBrowse link 3 196,568,660 196,589,059 RGD:2290271
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:2290271
G FH fumarate hydratase JBrowse link 1 241,497,603 241,519,755 RGD:2290271
G FMN2 formin 2 JBrowse link 1 240,091,883 240,475,187 RGD:2290271
G FMR1 FMRP translational regulator 1 JBrowse link X 147,911,919 147,951,127 RGD:2290271
G FOXO1 forkhead box O1 JBrowse link 13 40,555,667 40,666,641 RGD:2290271
G FOXP1 forkhead box P1 JBrowse link 3 70,952,817 71,583,989 RGD:2290271
G GNL1 G protein nucleolar 1 (putative) JBrowse link 6 30,541,377 30,557,594 RGD:2290271
G H2AX H2A.X variant histone JBrowse link 11 119,093,874 119,095,465 RGD:2290271
G HELB DNA helicase B JBrowse link 12 66,302,493 66,343,643 RGD:2290271
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 15 28,111,040 28,322,179 RGD:2290271
G HIC1 HIC ZBTB transcriptional repressor 1 JBrowse link 17 2,055,103 2,063,241 RGD:2290271
G HMCES 5-hydroxymethylcytosine binding, ES cell specific JBrowse link 3 129,278,832 129,306,186 RGD:2290271
G HPF1 histone PARylation factor 1 JBrowse link 4 169,729,470 169,757,944 RGD:2290271
G HROB homologous recombination factor with OB-fold JBrowse link 17 44,141,930 44,162,477 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 154,541,238 154,565,046 RGD:2290271
G IMMP2L inner mitochondrial membrane peptidase subunit 2 JBrowse link 7 110,662,644 111,562,531 RGD:2290271
G INIP INTS3 and NABP interacting protein JBrowse link 9 112,683,926 112,718,117 RGD:2290271
G INTS3 integrator complex subunit 3 JBrowse link 1 153,728,050 153,774,808 RGD:2290271
G IRF3 interferon regulatory factor 3 JBrowse link 19 49,659,569 49,665,875 RGD:2290271
G IRF7 interferon regulatory factor 7 JBrowse link 11 612,555 615,999 RGD:2290271
G KIN Kin17 DNA and RNA binding protein JBrowse link 10 7,750,962 7,787,993 RGD:2290271
G LYN LYN proto-oncogene, Src family tyrosine kinase JBrowse link 8 55,876,041 56,014,169 RGD:2290271
G MACROD1 mono-ADP ribosylhydrolase 1 JBrowse link 11 63,998,554 64,166,652 RGD:2290271
G MACROD2 mono-ADP ribosylhydrolase 2 JBrowse link 20 13,995,516 16,053,197 RGD:2290271
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:2290271
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 8 143,716,305 143,722,458 RGD:2290271
G MAPKAPK2 MAPK activated protein kinase 2 JBrowse link 1 206,684,905 206,734,283 RGD:2290271
G MASTL microtubule associated serine/threonine kinase like JBrowse link 10 27,154,479 27,187,953 RGD:2290271
G MCM10 minichromosome maintenance 10 replication initiation factor JBrowse link 10 13,161,558 13,211,110 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G MCM8 minichromosome maintenance 8 homologous recombination repair factor JBrowse link 20 5,950,652 6,000,941 RGD:2290271
G MCM9 minichromosome maintenance 9 homologous recombination repair factor JBrowse link 6 118,813,455 118,935,159 RGD:2290271
G MCTS1 MCTS1 re-initiation and release factor JBrowse link X 120,604,101 120,621,159 RGD:2290271
G MEN1 menin 1 JBrowse link 11 64,803,514 64,811,294 RGD:2290271
G METTL3 methyltransferase like 3 JBrowse link 14 21,498,138 21,511,340 RGD:2290271
G MICA MHC class I polypeptide-related sequence A JBrowse link 6 31,400,711 31,415,315 RGD:2290271
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component JBrowse link 10 97,458,324 97,498,794 RGD:2290271
G MNDA myeloid cell nuclear differentiation antigen JBrowse link 1 158,831,351 158,849,502 RGD:2290271
G MORC2 MORC family CW-type zinc finger 2 JBrowse link 22 30,925,130 30,968,774 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G MRNIP MRN complex interacting protein JBrowse link 5 179,837,276 179,858,817 RGD:2290271
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:2290271
G NABP1 nucleic acid binding protein 1 JBrowse link 2 191,678,072 191,690,667 RGD:2290271
G NABP2 nucleic acid binding protein 2 JBrowse link 12 56,222,012 56,229,858 RGD:2290271
G NCOA6 nuclear receptor coactivator 6 JBrowse link 20 34,714,774 34,825,651 RGD:2290271
G NEK4 NIMA related kinase 4 JBrowse link 3 52,708,444 52,770,949 RGD:2290271
G NFATC2 nuclear factor of activated T cells 2 JBrowse link 20 51,386,963 51,562,857 RGD:2290271
G NIPBL NIPBL cohesin loading factor JBrowse link 5 36,876,769 37,066,413 RGD:2290271
G NOP53 NOP53 ribosome biogenesis factor JBrowse link 19 47,745,546 47,757,058 RGD:2290271
G NPAS2 neuronal PAS domain protein 2 JBrowse link 2 100,820,139 100,996,829 RGD:2290271
G NUAK1 NUAK family kinase 1 JBrowse link 12 106,063,347 106,140,033 RGD:2290271
G NUPR2 nuclear protein 2, transcriptional regulator JBrowse link 7 56,114,681 56,116,417 RGD:2290271
G OARD1 O-acyl-ADP-ribose deacylase 1 JBrowse link 6 41,064,772 41,097,787 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 11 63,985,853 63,998,420 RGD:2290271
G PAK1 p21 (RAC1) activated kinase 1 JBrowse link 11 77,322,017 77,514,957 RGD:2290271
G PARG poly(ADP-ribose) glycohydrolase JBrowse link 10 49,818,274 49,942,027 RGD:2290271
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:2290271
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 13 24,420,930 24,512,993 RGD:2290271
G PAXX PAXX non-homologous end joining factor JBrowse link 9 136,992,422 136,993,976 RGD:2290271
G PCLAF PCNA clamp associated factor JBrowse link 15 64,364,304 64,387,687 RGD:2290271
G PHF1 PHD finger protein 1 JBrowse link 6 33,410,751 33,416,443 RGD:2290271
G PIDD1 p53-induced death domain protein 1 JBrowse link 11 799,179 809,867 RGD:2290271
G PLK3 polo like kinase 3 JBrowse link 1 44,799,952 44,805,995 RGD:2290271
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 JBrowse link 18 59,899,996 59,904,305 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLE3 DNA polymerase epsilon 3, accessory subunit JBrowse link 9 113,407,235 113,410,749 RGD:2290271
G POLK DNA polymerase kappa JBrowse link 5 75,511,308 75,605,820 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PPP1R15A protein phosphatase 1 regulatory subunit 15A JBrowse link 19 48,872,392 48,876,062 RGD:2290271
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 47,773,111 47,960,136 RGD:2290271
G PSEN1 presenilin 1 JBrowse link 14 73,136,436 73,223,691 RGD:2290271
G PSME4 proteasome activator subunit 4 JBrowse link 2 53,864,069 53,970,993 RGD:2290271
G RAD1 RAD1 checkpoint DNA exonuclease JBrowse link 5 34,905,260 34,915,504 RGD:2290271
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 5 69,369,297 69,414,801 RGD:2290271
G RAD18 RAD18 E3 ubiquitin protein ligase JBrowse link 3 8,877,075 8,969,249 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G RAD9A RAD9 checkpoint clamp component A JBrowse link 11 67,391,976 67,398,412 RGD:2290271
G RASSF1 Ras association domain family member 1 JBrowse link 3 50,329,786 50,340,936 RGD:2290271
G RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit JBrowse link 1 205,086,142 205,122,015 RGD:2290271
G RBBP6 RB binding protein 6, ubiquitin ligase JBrowse link 16 24,539,566 24,572,863 RGD:2290271
G RBM24 RNA binding motif protein 24 JBrowse link 6 17,281,361 17,293,875 RGD:2290271
G RFWD3 ring finger and WD repeat domain 3 JBrowse link 16 74,621,396 74,666,892 RGD:2290271
G RIF1 replication timing regulatory factor 1 JBrowse link 2 151,409,902 151,534,200 RGD:2290271
G RNF168 ring finger protein 168 JBrowse link 3 196,468,783 196,503,768 RGD:2290271
G RNF169 ring finger protein 169 JBrowse link 11 74,748,849 74,842,413 RGD:2290271
G RNF8 ring finger protein 8 JBrowse link 6 37,353,983 37,394,734 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPS3 ribosomal protein S3 JBrowse link 11 75,399,491 75,422,302 RGD:2290271
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 20 36,889,773 36,951,708 RGD:2290271
G SETD7 SET domain containing 7, histone lysine methyltransferase JBrowse link 4 139,495,934 139,556,769 RGD:2290271
G SETX senataxin JBrowse link 9 132,261,356 132,356,726 RGD:2290271
G SGK1 serum/glucocorticoid regulated kinase 1 JBrowse link 6 134,169,246 134,318,112 RGD:2290271
G SHPRH SNF2 histone linker PHD RING helicase JBrowse link 6 145,857,838 145,964,358 RGD:2290271
G SIRT1 sirtuin 1 JBrowse link 10 67,884,656 67,918,390 RGD:2290271
G SIRT4 sirtuin 4 JBrowse link 12 120,290,639 120,313,242 RGD:2290271
G SIRT7 sirtuin 7 JBrowse link 17 81,911,939 81,918,176 RGD:2290271
G SLF1 SMC5-SMC6 complex localization factor 1 JBrowse link 5 94,613,476 94,714,918 RGD:2290271
G SLF2 SMC5-SMC6 complex localization factor 2 JBrowse link 10 100,909,416 100,965,134 RGD:2290271
G SLFN11 schlafen family member 11 JBrowse link 17 35,350,305 35,373,914 RGD:2290271
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 JBrowse link 2 216,412,484 216,483,053 RGD:2290271
G SMC5 structural maintenance of chromosomes 5 JBrowse link 9 70,258,962 70,354,873 RGD:2290271
G SMC6 structural maintenance of chromosomes 6 JBrowse link 2 17,663,812 17,753,833 RGD:2290271
G SPATA18 spermatogenesis associated 18 JBrowse link 4 52,051,304 52,097,299 RGD:2290271
G SPDYA speedy/RINGO cell cycle regulator family member A JBrowse link 2 28,810,834 28,850,610 RGD:2290271
G SPIDR scaffold protein involved in DNA repair JBrowse link 8 47,260,878 47,736,306 RGD:2290271
G SPRTN SprT-like N-terminal domain JBrowse link 1 231,337,980 231,355,023 RGD:2290271
G STK11 serine/threonine kinase 11 JBrowse link 19 1,205,778 1,228,431 RGD:2290271
G STXBP4 syntaxin binding protein 4 JBrowse link 17 54,968,728 55,173,632 RGD:2290271
G SUSD6 sushi domain containing 6 JBrowse link 14 69,611,596 69,715,144 RGD:2290271
G SUV39H1 suppressor of variegation 3-9 homolog 1 JBrowse link X 48,695,554 48,709,016 RGD:2290271
G TAF1 TATA-box binding protein associated factor 1 JBrowse link X 71,366,220 71,530,525 RGD:2290271
G TAF9 TATA-box binding protein associated factor 9 JBrowse link 5 69,364,743 69,370,013 RGD:2290271
G TANK TRAF family member associated NFKB activator JBrowse link 2 161,136,955 161,236,230 RGD:2290271
G TAOK1 TAO kinase 1 JBrowse link 17 29,390,925 29,551,904 RGD:2290271
G TAOK2 TAO kinase 2 JBrowse link 16 29,973,868 29,992,261 RGD:2290271
G TAOK3 TAO kinase 3 JBrowse link 12 118,149,801 118,372,950 RGD:2290271
G TFDP3 transcription factor Dp family member 3 JBrowse link X 133,216,662 133,218,354 RGD:2290271
G TIGAR TP53 induced glycolysis regulatory phosphatase JBrowse link 12 4,321,213 4,360,028 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:2290271
G TIPIN TIMELESS interacting protein JBrowse link 15 66,334,974 66,387,273 RGD:2290271
G TLK1 tousled like kinase 1 JBrowse link 2 170,990,823 171,231,293 RGD:2290271
G TLK2 tousled like kinase 2 JBrowse link 17 62,470,908 62,615,481 RGD:2290271
G TOP2A DNA topoisomerase II alpha JBrowse link 17 40,388,525 40,417,902 RGD:2290271
G TOPBP1 DNA topoisomerase II binding protein 1 JBrowse link 3 133,600,238 133,661,968 RGD:2290271
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 9 32,540,544 32,552,628 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
G TP53BP1 tumor protein p53 binding protein 1 JBrowse link 15 43,403,061 43,510,640 RGD:2290271
G TP63 tumor protein p63 JBrowse link 3 189,596,746 189,897,279 RGD:2290271
G TP73 tumor protein p73 JBrowse link 1 3,652,516 3,736,201 RGD:2290271
G TRAF6 TNF receptor associated factor 6 JBrowse link 11 36,483,769 36,510,313 RGD:2290271
G TRIP12 thyroid hormone receptor interactor 12 JBrowse link 2 229,763,837 229,923,234 RGD:2290271
G UBA1 ubiquitin like modifier activating enzyme 1 JBrowse link X 47,190,847 47,215,128 RGD:2290271
G UBA6 ubiquitin like modifier activating enzyme 6 JBrowse link 4 67,612,652 67,701,155 RGD:2290271
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 134,371,569 134,392,108 RGD:2290271
G UBE2E2 ubiquitin conjugating enzyme E2 E2 JBrowse link 3 23,203,007 23,591,925 RGD:2290271
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 202,331,657 202,341,966 RGD:2290271
G UBQLN4 ubiquilin 4 JBrowse link 1 156,033,129 156,053,798 RGD:2290271
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 8 102,252,273 102,412,700 RGD:2290271
G USP10 ubiquitin specific peptidase 10 JBrowse link 16 84,699,977 84,779,922 RGD:2290271
G USP16 ubiquitin specific peptidase 16 JBrowse link 21 29,024,617 29,054,488 RGD:2290271
G USP28 ubiquitin specific peptidase 28 JBrowse link 11 113,797,875 113,875,572 RGD:2290271
G USP47 ubiquitin specific peptidase 47 JBrowse link 11 11,841,972 11,961,887 RGD:2290271
G VAV3 vav guanine nucleotide exchange factor 3 JBrowse link 1 107,571,161 107,965,180 RGD:2290271
G VCP valosin containing protein JBrowse link 9 35,056,064 35,072,668 RGD:2290271
G WAC WW domain containing adaptor with coiled-coil JBrowse link 10 28,532,772 28,623,112 RGD:2290271
G WDHD1 WD repeat and HMG-box DNA binding protein 1 JBrowse link 14 54,938,949 55,027,106 RGD:2290271
G WDR4 WD repeat domain 4 JBrowse link 21 42,843,075 42,891,695 RGD:2290271
G WDR76 WD repeat domain 76 JBrowse link 15 43,826,977 43,868,419 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G XIAP X-linked inhibitor of apoptosis JBrowse link X 123,859,708 123,913,972 RGD:2290271
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 103,697,611 103,715,486 RGD:2290271
G XRCC5 X-ray repair cross complementing 5 JBrowse link 2 216,109,348 216,206,293 RGD:2290271
G YAP1 Yes1 associated transcriptional regulator JBrowse link 11 102,109,957 102,233,424 RGD:2290271
G YY1 YY1 transcription factor JBrowse link 14 100,239,144 100,282,788 RGD:2290271
G ZBTB1 zinc finger and BTB domain containing 1 JBrowse link 14 64,504,574 64,533,693 RGD:2290271
G ZBTB18 zinc finger and BTB domain containing 18 JBrowse link 1 244,048,939 244,057,476 RGD:2290271
G ZBTB3 zinc finger and BTB domain containing 3 JBrowse link 11 62,750,963 62,754,160 RGD:2290271
G ZBTB38 zinc finger and BTB domain containing 38 JBrowse link 3 141,324,186 141,449,792 RGD:2290271
G ZBTB4 zinc finger and BTB domain containing 4 JBrowse link 17 7,459,366 7,484,249 RGD:2290271
G ZBTB40 zinc finger and BTB domain containing 40 JBrowse link 1 22,428,838 22,531,157 RGD:2290271
G ZBTB42 zinc finger and BTB domain containing 42 JBrowse link 14 104,800,554 104,804,712 RGD:2290271
G ZBTB47 zinc finger and BTB domain containing 47 JBrowse link 3 42,653,697 42,667,580 RGD:2290271
G ZBTB5 zinc finger and BTB domain containing 5 JBrowse link 9 37,438,102 37,465,450 RGD:2290271
G ZBTB7A zinc finger and BTB domain containing 7A JBrowse link 19 4,043,303 4,066,899 RGD:2290271
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 37,474,518 37,484,377 RGD:2290271
G ZDHHC16 zinc finger DHHC-type palmitoyltransferase 16 JBrowse link 10 97,446,131 97,457,370 RGD:2290271
G ZMAT3 zinc finger matrin-type 3 JBrowse link 3 179,017,223 179,072,513 RGD:2290271
G ZNF385A zinc finger protein 385A JBrowse link 12 54,369,134 54,391,610 RGD:2290271
G ZNF652 zinc finger protein 652 JBrowse link 17 49,289,206 49,362,473 RGD:2290271
G ZNF771 zinc finger protein 771 JBrowse link 16 30,407,414 30,419,414 RGD:2290271
G ZRANB3 zinc finger RANBP2-type containing 3 JBrowse link 2 135,164,218 135,531,218 RGD:2290271
base-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AL451136.1 novel protein RGD:2290271
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 14 20,455,226 20,457,767 RGD:2290271
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 JBrowse link X 55,000,363 55,009,057 RGD:2290271
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G DNTT DNA nucleotidylexotransferase JBrowse link 10 96,304,434 96,338,564 RGD:2290271
G ERCC6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 10 49,454,470 49,539,538 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G HMGA1 high mobility group AT-hook 1 JBrowse link 6 34,236,873 34,246,231 RGD:2290271
G HMGA2 high mobility group AT-hook 2 JBrowse link 12 65,824,460 65,966,291 RGD:2290271
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 53,532,096 53,686,723 RGD:2290271
G L34079.1 novel protein RGD:2290271
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
G MPG N-methylpurine DNA glycosylase JBrowse link 16 77,019 85,851 RGD:2290271
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:2290271
G NEIL1 nei like DNA glycosylase 1 JBrowse link 15 75,346,638 75,357,115 RGD:2290271
G NEIL2 nei like DNA glycosylase 2 JBrowse link 8 11,769,710 11,787,345 RGD:2290271
G NEIL3 nei like DNA glycosylase 3 JBrowse link 4 177,309,871 177,362,936 RGD:2290271
G NTHL1 nth like DNA glycosylase 1 JBrowse link 16 2,039,820 2,047,834 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
G PARP2 poly(ADP-ribose) polymerase 2 JBrowse link 14 20,343,041 20,357,904 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
G POLM DNA polymerase mu JBrowse link 7 44,072,062 44,082,540 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PRMT6 protein arginine methyltransferase 6 JBrowse link 1 107,056,674 107,059,294 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G SIRT6 sirtuin 6 JBrowse link 19 4,174,109 4,182,563 RGD:2290271
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 JBrowse link 12 54,121,274 54,188,994 RGD:2290271
G TDG thymine DNA glycosylase JBrowse link 12 103,965,804 103,988,878 RGD:2290271
G UNG uracil DNA glycosylase JBrowse link 12 109,097,597 109,110,992 RGD:2290271
G USP47 ubiquitin specific peptidase 47 JBrowse link 11 11,841,972 11,961,887 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G XPA XPA, DNA damage recognition and repair factor JBrowse link 9 97,654,398 97,697,409 RGD:2290271
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 43,543,311 43,575,527 RGD:2290271
base-excision repair, AP site formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NTHL1 nth like DNA glycosylase 1 JBrowse link 16 2,039,820 2,047,834 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
G TDG thymine DNA glycosylase JBrowse link 12 103,965,804 103,988,878 RGD:2290271
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G UNG uracil DNA glycosylase JBrowse link 12 109,097,597 109,110,992 RGD:2290271
base-excision repair, base-free sugar-phosphate removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 14 20,455,226 20,457,767 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
base-excision repair, DNA ligation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 43,543,311 43,575,527 RGD:2290271
base-excision repair, gap-filling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLG DNA polymerase gamma, catalytic subunit JBrowse link 15 89,316,320 89,334,824 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
depurination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MPG N-methylpurine DNA glycosylase JBrowse link 16 77,019 85,851 RGD:2290271
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
depyrimidination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MBD4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link 3 129,430,944 129,440,179 RGD:2290271
G NEIL1 nei like DNA glycosylase 1 JBrowse link 15 75,346,638 75,357,115 RGD:2290271
G NEIL2 nei like DNA glycosylase 2 JBrowse link 8 11,769,710 11,787,345 RGD:2290271
G NTHL1 nth like DNA glycosylase 1 JBrowse link 16 2,039,820 2,047,834 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 JBrowse link 12 54,121,274 54,188,994 RGD:2290271
G TDG thymine DNA glycosylase JBrowse link 12 103,965,804 103,988,878 RGD:2290271
G UNG uracil DNA glycosylase JBrowse link 12 109,097,597 109,110,992 RGD:2290271
detection of DNA damage stimulus involved in DNA damage checkpoint term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TREX1 three prime repair exonuclease 1 JBrowse link 3 48,465,830 48,467,645 RGD:2290271
DNA damage checkpoint term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G ATR ATR serine/threonine kinase JBrowse link 3 142,449,235 142,578,793 RGD:2290271
G ATRIP ATR interacting protein JBrowse link 3 48,446,710 48,467,645 RGD:2290271
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G CEP63 centrosomal protein 63 JBrowse link 3 134,485,724 134,783,169 RGD:2290271
G CHEK1 checkpoint kinase 1 JBrowse link 11 125,624,910 125,676,256 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G CLOCK clock circadian regulator JBrowse link 4 55,427,901 55,547,138 RGD:2290271
G CLSPN claspin JBrowse link 1 35,720,213 35,769,985 RGD:2290271
G DONSON DNA replication fork stabilization factor DONSON JBrowse link 21 33,577,551 33,588,684 RGD:2290271
G DOT1L DOT1 like histone lysine methyltransferase JBrowse link 19 2,163,933 2,232,578 RGD:2290271
G E2F1 E2F transcription factor 1 JBrowse link 20 33,675,477 33,686,385 RGD:2290271
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 15 39,934,115 40,035,591 RGD:2290271
G ERCC6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 10 49,454,470 49,539,538 RGD:2290271
G FBXO6 F-box protein 6 JBrowse link 1 11,664,200 11,674,354 RGD:2290271
G H2AX H2A.X variant histone JBrowse link 11 119,093,874 119,095,465 RGD:2290271
G HINFP histone H4 transcription factor JBrowse link 11 119,121,523 119,136,059 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G INTS7 integrator complex subunit 7 JBrowse link 1 211,940,328 212,035,660 RGD:2290271
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 JBrowse link 2 173,075,435 173,268,015 RGD:2290271
G MAPK14 mitogen-activated protein kinase 14 JBrowse link 6 36,027,677 36,122,964 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G PEA15 proliferation and apoptosis adaptor protein 15 JBrowse link 1 160,205,384 160,215,376 RGD:2290271
G PTPN11 protein tyrosine phosphatase non-receptor type 11 JBrowse link 12 112,418,915 112,509,918 RGD:2290271
G RAD1 RAD1 checkpoint DNA exonuclease JBrowse link 5 34,905,260 34,915,504 RGD:2290271
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 5 69,369,297 69,414,801 RGD:2290271
G RAD9A RAD9 checkpoint clamp component A JBrowse link 11 67,391,976 67,398,412 RGD:2290271
G RAD9B RAD9 checkpoint clamp component B JBrowse link 12 110,501,651 110,534,632 RGD:2290271
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 JBrowse link 12 2,876,265 2,889,525 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G TIPRL TOR signaling pathway regulator JBrowse link 1 168,178,962 168,202,109 RGD:2290271
G TP53BP1 tumor protein p53 binding protein 1 JBrowse link 15 43,403,061 43,510,640 RGD:2290271
G USP28 ubiquitin specific peptidase 28 JBrowse link 11 113,797,875 113,875,572 RGD:2290271
DNA damage induced protein phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 9 130,713,881 130,887,675 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G CHEK1 checkpoint kinase 1 JBrowse link 11 125,624,910 125,676,256 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G CRY1 cryptochrome circadian regulator 1 JBrowse link 12 106,991,364 107,093,872 RGD:2290271
G MAP2K6 mitogen-activated protein kinase kinase 6 JBrowse link 17 69,414,697 69,553,865 RGD:2290271
G MAPK12 mitogen-activated protein kinase 12 JBrowse link 22 50,252,901 50,261,810 RGD:2290271
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:2290271
DNA damage response, detection of DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CFAP410 cilia and flagella associated protein 410 JBrowse link 21 44,328,944 44,339,417 RGD:2290271
G CUL4A cullin 4A JBrowse link 13 113,208,193 113,267,108 RGD:2290271
G CUL4B cullin 4B JBrowse link X 120,523,858 120,575,829 RGD:2290271
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 61,299,451 61,333,105 RGD:2290271
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 212,035,553 212,105,013 RGD:2290271
G HMGA2 high mobility group AT-hook 2 JBrowse link 12 65,824,460 65,966,291 RGD:2290271
G MRPS11 mitochondrial ribosomal protein S11 JBrowse link 15 88,467,708 88,480,776 RGD:2290271
G MRPS26 mitochondrial ribosomal protein S26 JBrowse link 20 3,046,052 3,048,250 RGD:2290271
G MRPS35 mitochondrial ribosomal protein S35 JBrowse link 12 27,710,773 27,756,304 RGD:2290271
G MRPS9 mitochondrial ribosomal protein S9 JBrowse link 2 105,037,469 105,099,960 RGD:2290271
G NEK1 NIMA related kinase 1 JBrowse link 4 169,392,809 169,612,629 RGD:2290271
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 49,861,204 49,867,576 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLD2 DNA polymerase delta 2, accessory subunit JBrowse link 7 44,114,680 44,123,668 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 11 67,350,765 67,353,596 RGD:2290271
G RAD18 RAD18 E3 ubiquitin protein ligase JBrowse link 3 8,877,075 8,969,249 RGD:2290271
G RBX1 ring-box 1 JBrowse link 22 40,951,378 40,973,309 RGD:2290271
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G RPS27A ribosomal protein S27a JBrowse link 2 55,231,903 55,235,853 RGD:2290271
G RPS3 ribosomal protein S3 JBrowse link 11 75,399,491 75,422,302 RGD:2290271
G SOX4 SRY-box transcription factor 4 JBrowse link 6 21,593,751 21,598,619 RGD:2290271
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 JBrowse link 19 18,563,766 18,577,550 RGD:2290271
G UBB ubiquitin B JBrowse link 17 16,380,793 16,382,745 RGD:2290271
G UBC ubiquitin C JBrowse link 12 124,911,646 124,914,650 RGD:2290271
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 134,371,569 134,392,108 RGD:2290271
G USP1 ubiquitin specific peptidase 1 JBrowse link 1 62,436,304 62,451,804 RGD:2290271
G WDR48 WD repeat domain 48 JBrowse link 3 39,052,002 39,096,671 RGD:2290271
DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACER2 alkaline ceramidase 2 JBrowse link 9 19,408,927 19,455,173 RGD:2290271
G ATRX ATRX chromatin remodeler JBrowse link X 77,504,878 77,786,235 RGD:2290271
G BATF basic leucine zipper ATF-like transcription factor JBrowse link 14 75,522,469 75,546,992 RGD:2290271
G BCL3 BCL3 transcription coactivator JBrowse link 19 44,742,620 44,760,044 RGD:2290271
G E2F7 E2F transcription factor 7 JBrowse link 12 77,021,251 77,065,580 RGD:2290271
G FOXO3 forkhead box O3 JBrowse link 6 108,559,825 108,684,774 RGD:2290271
G MDM4 MDM4 regulator of p53 JBrowse link 1 204,516,377 204,558,120 RGD:2290271
G MIF macrophage migration inhibitory factor JBrowse link 22 23,894,383 23,895,223 RGD:2290271
G MYO6 myosin VI JBrowse link 6 75,749,203 75,919,537 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G NDRG1 N-myc downstream regulated 1 JBrowse link 8 133,237,175 133,297,252 RGD:2290271
G PAXIP1 PAX interacting protein 1 JBrowse link 7 154,943,690 155,003,419 RGD:2290271
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D JBrowse link 17 60,600,187 60,666,280 RGD:2290271
G SESN2 sestrin 2 JBrowse link 1 28,259,452 28,282,491 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 JBrowse link 12 120,443,964 120,446,384 RGD:2290271
G USP10 ubiquitin specific peptidase 10 JBrowse link 16 84,699,977 84,779,922 RGD:2290271
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARID3A AT-rich interaction domain 3A JBrowse link 19 925,733 975,939 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G AURKA aurora kinase A JBrowse link 20 56,369,389 56,392,337 RGD:2290271
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:2290271
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 203,305,519 203,309,602 RGD:2290271
G CARM1 coactivator associated arginine methyltransferase 1 JBrowse link 19 10,871,553 10,923,078 RGD:2290271
G CASP2 caspase 2 JBrowse link 7 143,288,351 143,307,696 RGD:2290271
G CCNB1 cyclin B1 JBrowse link 5 69,167,010 69,178,245 RGD:2290271
G CDC25C cell division cycle 25C JBrowse link 5 138,285,265 138,338,355 RGD:2290271
G CDK1 cyclin dependent kinase 1 JBrowse link 10 60,778,331 60,794,852 RGD:2290271
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:2290271
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 6 36,676,463 36,687,332 RGD:2290271
G CDKN1B cyclin dependent kinase inhibitor 1B JBrowse link 12 12,717,368 12,722,369 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G CNOT1 CCR4-NOT transcription complex subunit 1 JBrowse link 16 58,519,951 58,629,826 RGD:2290271
G CNOT10 CCR4-NOT transcription complex subunit 10 JBrowse link 3 32,685,188 32,773,875 RGD:2290271
G CNOT11 CCR4-NOT transcription complex subunit 11 JBrowse link 2 101,252,886 101,270,316 RGD:2290271
G CNOT2 CCR4-NOT transcription complex subunit 2 JBrowse link 12 70,242,993 70,355,257 RGD:2290271
G CNOT3 CCR4-NOT transcription complex subunit 3 JBrowse link 19 54,137,689 54,155,690 RGD:2290271
G CNOT4 CCR4-NOT transcription complex subunit 4 JBrowse link 7 135,361,795 135,510,127 RGD:2290271
G CNOT6 CCR4-NOT transcription complex subunit 6 JBrowse link 5 180,494,373 180,578,358 RGD:2290271
G CNOT6L CCR4-NOT transcription complex subunit 6 like JBrowse link 4 77,713,387 77,820,269 RGD:2290271
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 8 17,221,981 17,246,909 RGD:2290271
G CNOT8 CCR4-NOT transcription complex subunit 8 JBrowse link 5 154,857,952 154,876,792 RGD:2290271
G CNOT9 CCR4-NOT transcription complex subunit 9 JBrowse link 2 218,568,578 218,597,080 RGD:2290271
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain JBrowse link 12 93,677,342 93,894,840 RGD:2290271
G E2F1 E2F transcription factor 1 JBrowse link 20 33,675,477 33,686,385 RGD:2290271
G E2F4 E2F transcription factor 4 JBrowse link 16 67,192,155 67,198,918 RGD:2290271
G E2F7 E2F transcription factor 7 JBrowse link 12 77,021,251 77,065,580 RGD:2290271
G E2F8 E2F transcription factor 8 JBrowse link 11 19,224,063 19,241,655 RGD:2290271
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:2290271
G GADD45A growth arrest and DNA damage inducible alpha JBrowse link 1 67,685,201 67,688,334 RGD:2290271
G GML glycosylphosphatidylinositol anchored molecule like JBrowse link 8 142,834,801 142,846,851 RGD:2290271
G GTSE1 G2 and S-phase expressed 1 JBrowse link 22 46,295,143 46,333,699 RGD:2290271
G MDM2 MDM2 proto-oncogene JBrowse link 12 68,808,149 68,850,686 RGD:2290271
G MDM4 MDM4 regulator of p53 JBrowse link 1 204,516,377 204,558,120 RGD:2290271
G MUC1 mucin 1, cell surface associated JBrowse link 1 155,185,824 155,192,915 RGD:2290271
G PCBP4 poly(rC) binding protein 4 JBrowse link 3 51,957,454 51,967,466 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G PIDD1 p53-induced death domain protein 1 JBrowse link 11 799,179 809,867 RGD:2290271
G PLAGL1 PLAG1 like zinc finger 1 JBrowse link 6 143,940,300 144,064,599 RGD:2290271
G PLK2 polo like kinase 2 JBrowse link 5 58,453,982 58,460,139 RGD:2290271
G PLK3 polo like kinase 3 JBrowse link 1 44,799,952 44,805,995 RGD:2290271
G PML PML nuclear body scaffold JBrowse link 15 73,994,673 74,047,827 RGD:2290271
G PPP2R5C protein phosphatase 2 regulatory subunit B'gamma JBrowse link 14 101,760,573 101,927,992 RGD:2290271
G PRMT1 protein arginine methyltransferase 1 JBrowse link 19 49,676,166 49,688,450 RGD:2290271
G RBL2 RB transcriptional corepressor like 2 JBrowse link 16 53,434,471 53,491,648 RGD:2290271
G RBM38 RNA binding motif protein 38 JBrowse link 20 57,391,396 57,409,333 RGD:2290271
G RGCC regulator of cell cycle JBrowse link 13 41,457,411 41,470,876 RGD:2290271
G RPL26 ribosomal protein L26 JBrowse link 17 8,377,516 8,383,193 RGD:2290271
G SFN stratifin JBrowse link 1 26,863,149 26,864,456 RGD:2290271
G SOX4 SRY-box transcription factor 4 JBrowse link 6 21,593,751 21,598,619 RGD:2290271
G TFDP1 transcription factor Dp-1 JBrowse link 13 113,584,688 113,641,473 RGD:2290271
G TFDP2 transcription factor Dp-2 JBrowse link 3 141,944,428 142,149,544 RGD:2290271
G TNKS1BP1 tankyrase 1 binding protein 1 JBrowse link 11 57,299,631 57,324,952 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 JBrowse link 12 120,443,964 120,446,384 RGD:2290271
G ZNF385A zinc finger protein 385A JBrowse link 12 54,369,134 54,391,610 RGD:2290271
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,508 32,400,268 RGD:2290271
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 6 36,676,463 36,687,332 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G FOXM1 forkhead box M1 JBrowse link 12 2,857,680 2,877,174 RGD:2290271
G HIPK2 homeodomain interacting protein kinase 2 JBrowse link 7 139,561,570 139,777,998 RGD:2290271
G ING4 inhibitor of growth family member 4 JBrowse link 12 6,650,301 6,663,143 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G MUC1 mucin 1, cell surface associated JBrowse link 1 155,185,824 155,192,915 RGD:2290271
G RBM38 RNA binding motif protein 38 JBrowse link 20 57,391,396 57,409,333 RGD:2290271
G RPS27L ribosomal protein S27 like JBrowse link 15 63,148,249 63,157,477 RGD:2290271
G RPS6KA6 ribosomal protein S6 kinase A6 JBrowse link X 84,058,346 84,188,199 RGD:2290271
G SP100 SP100 nuclear antigen JBrowse link 2 230,416,156 230,545,606 RGD:2290271
G TFAP4 transcription factor AP-4 JBrowse link 16 4,257,186 4,273,023 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
DNA damage response, signal transduction resulting in transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAD2L2 mitotic arrest deficient 2 like 2 JBrowse link 1 11,674,480 11,691,621 RGD:2290271
DNA dealkylation involved in DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 14 77,672,404 77,708,038 RGD:2290271
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase JBrowse link 12 109,088,188 109,093,631 RGD:2290271
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase JBrowse link 11 43,880,831 43,920,274 RGD:2290271
G ALKBH5 alkB homolog 5, RNA demethylase JBrowse link 17 18,183,828 18,209,954 RGD:2290271
G ASCC1 activating signal cointegrator 1 complex subunit 1 JBrowse link 10 72,096,032 72,218,777 RGD:2290271
G ASCC2 activating signal cointegrator 1 complex subunit 2 JBrowse link 22 29,788,608 29,838,282 RGD:2290271
G ASCC3 activating signal cointegrator 1 complex subunit 3 JBrowse link 6 100,508,194 100,884,455 RGD:2290271
G FTO FTO alpha-ketoglutarate dependent dioxygenase JBrowse link 16 53,703,963 54,121,941 RGD:2290271
G MGMT O-6-methylguanine-DNA methyltransferase JBrowse link 10 129,467,241 129,770,983 RGD:2290271
G MPG N-methylpurine DNA glycosylase JBrowse link 16 77,019 85,851 RGD:2290271
DNA double-strand break processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2 214,725,645 214,809,683 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 68,414,064 68,472,521 RGD:2290271
G EXD2 exonuclease 3'-5' domain containing 2 JBrowse link 14 69,191,477 69,244,020 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RBBP8 RB binding protein 8, endonuclease JBrowse link 18 22,914,121 23,026,486 RGD:2290271
G SETMAR SET domain and mariner transposase fusion gene JBrowse link 3 4,303,304 4,320,649 RGD:2290271
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 JBrowse link 4 94,207,608 94,291,292 RGD:2290271
G UBE2N ubiquitin conjugating enzyme E2 N JBrowse link 12 93,405,684 93,442,336 RGD:2290271
G UBE2V2 ubiquitin conjugating enzyme E2 V2 JBrowse link 8 47,997,527 48,064,708 RGD:2290271
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G RBBP8 RB binding protein 8, endonuclease JBrowse link 18 22,914,121 23,026,486 RGD:2290271
G RNF138 ring finger protein 138 JBrowse link 18 32,091,858 32,131,561 RGD:2290271
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 16 30,193,843 30,197,566 RGD:2290271
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit JBrowse link 16 29,454,501 29,458,224 RGD:2290271
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 3,579,653 3,611,639 RGD:2290271
DNA ligation involved in DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HMGB1 high mobility group box 1 JBrowse link 13 30,456,704 30,617,597 RGD:2290271
G HMGB2 high mobility group box 2 JBrowse link 4 173,331,376 173,334,358 RGD:2290271
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:2290271
G PAXX PAXX non-homologous end joining factor JBrowse link 9 136,992,422 136,993,976 RGD:2290271
G XRCC4 X-ray repair cross complementing 4 JBrowse link 5 83,077,409 83,370,333 RGD:2290271
DNA recombinase assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 38,509,154 38,570,286 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G SWI5 SWI5 homologous recombination repair protein JBrowse link 9 128,275,364 128,288,990 RGD:2290271
DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC004223.3 RAD51L3-RFFL readthrough RGD:2290271
G AC116366.3 novel protein RGD:2290271
G ACTL6A actin like 6A JBrowse link 3 179,562,880 179,588,407 RGD:2290271
G ACTR8 actin related protein 8 JBrowse link 3 53,858,992 53,882,160 RGD:2290271
G ADPRS ADP-ribosylserine hydrolase JBrowse link 1 36,088,885 36,093,932 RGD:2290271
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 14 77,672,404 77,708,038 RGD:2290271
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase JBrowse link 11 43,880,831 43,920,274 RGD:2290271
G ANKLE1 ankyrin repeat and LEM domain containing 1 JBrowse link 19 17,281,901 17,287,646 RGD:2290271
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 14 20,455,226 20,457,767 RGD:2290271
G ASF1A anti-silencing function 1A histone chaperone JBrowse link 6 118,894,152 118,909,171 RGD:2290271
G ASTE1 asteroid homolog 1 JBrowse link 3 131,013,873 131,026,854 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G ATR ATR serine/threonine kinase JBrowse link 3 142,449,235 142,578,793 RGD:2290271
G ATRIP ATR interacting protein JBrowse link 3 48,446,710 48,467,645 RGD:2290271
G ATRX ATRX chromatin remodeler JBrowse link X 77,504,878 77,786,235 RGD:2290271
G BACH1 BTB domain and CNC homolog 1 JBrowse link 21 29,298,922 29,361,896 RGD:2290271
G BCCIP BRCA2 and CDKN1A interacting protein JBrowse link 10 125,823,546 125,853,695 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 JBrowse link 4 13,568,738 13,627,725 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 155,071,403 155,126,766 RGD:2290271
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 203,305,519 203,309,602 RGD:2290271
G CDC14B cell division cycle 14B JBrowse link 9 96,492,743 96,619,843 RGD:2290271
G CDC5L cell division cycle 5 like JBrowse link 6 44,387,706 44,450,425 RGD:2290271
G CDK1 cyclin dependent kinase 1 JBrowse link 10 60,778,331 60,794,852 RGD:2290271
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:2290271
G CDK9 cyclin dependent kinase 9 JBrowse link 9 127,786,034 127,790,792 RGD:2290271
G CENPS centromere protein S JBrowse link 1 10,430,433 10,442,808 RGD:2290271
G CENPS-CORT CENPS-CORT readthrough JBrowse link 1 10,430,433 10,452,153 RGD:2290271
G CENPX centromere protein X JBrowse link 17 82,018,703 82,022,930 RGD:2290271
G CEP164 centrosomal protein 164 JBrowse link 11 117,316,346 117,413,266 RGD:2290271
G CGAS cyclic GMP-AMP synthase JBrowse link 6 73,423,711 73,452,297 RGD:2290271
G CHAF1A chromatin assembly factor 1 subunit A JBrowse link 19 4,402,596 4,448,322 RGD:2290271
G CHAF1B chromatin assembly factor 1 subunit B JBrowse link 21 36,380,145 36,419,015 RGD:2290271
G CHD1L chromodomain helicase DNA binding protein 1 like JBrowse link 1 147,172,747 147,295,766 RGD:2290271
G CHEK1 checkpoint kinase 1 JBrowse link 11 125,624,910 125,676,256 RGD:2290271
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 20 63,343,223 63,375,471 RGD:2290271
G CINP cyclin dependent kinase 2 interacting protein JBrowse link 14 102,348,282 102,362,916 RGD:2290271
G CLSPN claspin JBrowse link 1 35,720,213 35,769,985 RGD:2290271
G CSNK1E casein kinase 1 epsilon JBrowse link 22 38,290,691 38,318,084 RGD:2290271
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 61,299,451 61,333,105 RGD:2290271
G DDB2 damage specific DNA binding protein 2 JBrowse link 11 47,214,942 47,239,218 RGD:2290271
G DDX11 DEAD/H-box helicase 11 JBrowse link 12 31,073,860 31,104,799 RGD:2290271
G DMAP1 DNA methyltransferase 1 associated protein 1 JBrowse link 1 44,213,471 44,220,673 RGD:2290271
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 38,509,154 38,570,286 RGD:2290271
G DOT1L DOT1 like histone lysine methyltransferase JBrowse link 19 2,163,933 2,232,578 RGD:2290271
G EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 JBrowse link 7 36,153,252 36,301,538 RGD:2290271
G EID3 EP300 interacting inhibitor of differentiation 3 JBrowse link 12 104,303,739 104,305,205 RGD:2290271
G EME1 essential meiotic structure-specific endonuclease 1 JBrowse link 17 50,373,220 50,381,483 RGD:2290271
G EME2 essential meiotic structure-specific endonuclease subunit 2 JBrowse link 16 1,773,222 1,776,714 RGD:2290271
G EMSY EMSY transcriptional repressor, BRCA2 interacting JBrowse link 11 76,444,928 76,553,031 RGD:2290271
G ENDOV endonuclease V JBrowse link 17 80,415,117 80,438,086 RGD:2290271
G EPC2 enhancer of polycomb homolog 2 JBrowse link 2 148,644,751 148,788,491 RGD:2290271
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 45,407,334 45,451,547 RGD:2290271
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit JBrowse link 2 127,257,290 127,294,166 RGD:2290271
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 13,920,137 13,952,348 RGD:2290271
G ERCC6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 10 49,454,470 49,539,538 RGD:2290271
G ETAA1 ETAA1 activator of ATR kinase JBrowse link 2 67,397,317 67,412,089 RGD:2290271
G EXO1 exonuclease 1 JBrowse link 1 241,847,967 241,889,939 RGD:2290271
G EYA2 EYA transcriptional coactivator and phosphatase 2 JBrowse link 20 46,894,624 47,188,844 RGD:2290271
G EYA4 EYA transcriptional coactivator and phosphatase 4 JBrowse link 6 133,240,340 133,532,128 RGD:2290271
G FAN1 FANCD2 and FANCI associated nuclease 1 JBrowse link 15 30,903,852 30,943,108 RGD:2290271
G FANCA FA complementation group A JBrowse link 16 89,737,549 89,816,647 RGD:2290271
G FANCC FA complementation group C JBrowse link 9 95,099,054 95,317,730 RGD:2290271
G FANCD2 FA complementation group D2 JBrowse link 3 10,026,437 10,101,932 RGD:2290271
G FANCG FA complementation group G JBrowse link 9 35,073,839 35,079,942 RGD:2290271
G FANCI FA complementation group I JBrowse link 15 89,243,973 89,317,259 RGD:2290271
G FANCL FA complementation group L JBrowse link 2 58,159,243 58,241,681 RGD:2290271
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,889,572 5,937,595 RGD:2290271
G FBXO6 F-box protein 6 JBrowse link 1 11,664,200 11,674,354 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G FH fumarate hydratase JBrowse link 1 241,497,603 241,519,755 RGD:2290271
G FOXM1 forkhead box M1 JBrowse link 12 2,857,680 2,877,174 RGD:2290271
G FZR1 fizzy and cell division cycle 20 related 1 JBrowse link 19 3,506,263 3,538,334 RGD:2290271
G GADD45A growth arrest and DNA damage inducible alpha JBrowse link 1 67,685,201 67,688,334 RGD:2290271
G GEN1 GEN1 Holliday junction 5' flap endonuclease JBrowse link 2 17,753,687 17,788,946 RGD:2290271
G GTF2H1 general transcription factor IIH subunit 1 JBrowse link 11 18,322,269 18,367,045 RGD:2290271
G GTF2H3 general transcription factor IIH subunit 3 JBrowse link 12 123,633,739 123,662,604 RGD:2290271
G GTF2H4 general transcription factor IIH subunit 4 JBrowse link 6 30,908,207 30,914,106 RGD:2290271
G HDAC10 histone deacetylase 10 JBrowse link 22 50,245,183 50,251,265 RGD:2290271
G HELB DNA helicase B JBrowse link 12 66,302,493 66,343,643 RGD:2290271
G HINFP histone H4 transcription factor JBrowse link 11 119,121,523 119,136,059 RGD:2290271
G HSF1 heat shock transcription factor 1 JBrowse link 8 144,291,603 144,314,720 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G IGHMBP2 immunoglobulin mu DNA binding protein 2 JBrowse link 11 68,903,855 68,940,601 RGD:2290271
G INIP INTS3 and NABP interacting protein JBrowse link 9 112,683,926 112,718,117 RGD:2290271
G INO80 INO80 complex ATPase subunit JBrowse link 15 40,978,880 41,117,778 RGD:2290271
G INO80B INO80 complex subunit B JBrowse link 2 74,455,087 74,457,944 RGD:2290271
G INO80C INO80 complex subunit C JBrowse link 18 35,468,333 35,497,960 RGD:2290271
G INO80D INO80 complex subunit D JBrowse link 2 205,993,721 206,086,174 RGD:2290271
G INO80E INO80 complex subunit E JBrowse link 16 29,995,690 30,005,791 RGD:2290271
G INTS3 integrator complex subunit 3 JBrowse link 1 153,728,050 153,774,808 RGD:2290271
G JMY junction mediating and regulatory protein, p53 cofactor JBrowse link 5 79,236,131 79,327,215 RGD:2290271
G KAT7 lysine acetyltransferase 7 JBrowse link 17 49,788,681 49,835,026 RGD:2290271
G KIF22 kinesin family member 22 JBrowse link 16 29,790,734 29,805,543 RGD:2290271
G KIN Kin17 DNA and RNA binding protein JBrowse link 10 7,750,962 7,787,993 RGD:2290271
G KMT5B lysine methyltransferase 5B JBrowse link 11 68,154,863 68,213,899 RGD:2290271
G KMT5C lysine methyltransferase 5C JBrowse link 19 55,339,876 55,348,121 RGD:2290271
G LIG1 DNA ligase 1 JBrowse link 19 48,115,445 48,170,603 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G MBD4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link 3 129,430,944 129,440,179 RGD:2290271
G MCRS1 microspherule protein 1 JBrowse link 12 49,558,294 49,568,233 RGD:2290271
G MEN1 menin 1 JBrowse link 11 64,803,514 64,811,294 RGD:2290271
G MGMT O-6-methylguanine-DNA methyltransferase JBrowse link 10 129,467,241 129,770,983 RGD:2290271
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component JBrowse link 10 97,458,324 97,498,794 RGD:2290271
G MNAT1 MNAT1 component of CDK activating kinase JBrowse link 14 60,734,735 60,969,965 RGD:2290271
G MORF4L2 mortality factor 4 like 2 JBrowse link X 103,675,498 103,688,158 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G MRNIP MRN complex interacting protein JBrowse link 5 179,837,276 179,858,817 RGD:2290271
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:2290271
G MSH3 mutS homolog 3 JBrowse link 5 80,654,652 80,876,815 RGD:2290271
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:2290271
G MUS81 MUS81 structure-specific endonuclease subunit JBrowse link 11 65,860,244 65,867,653 RGD:2290271
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:2290271
G NABP1 nucleic acid binding protein 1 JBrowse link 2 191,678,072 191,690,667 RGD:2290271
G NABP2 nucleic acid binding protein 2 JBrowse link 12 56,222,012 56,229,858 RGD:2290271
G NFRKB nuclear factor related to kappaB binding protein JBrowse link 11 129,863,636 129,895,596 RGD:2290271
G NONO non-POU domain containing octamer binding JBrowse link X 71,283,192 71,301,168 RGD:2290271
G NOP53 NOP53 ribosome biogenesis factor JBrowse link 19 47,745,546 47,757,058 RGD:2290271
G NPM1 nucleophosmin 1 JBrowse link 5 171,387,116 171,410,884 RGD:2290271
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component JBrowse link 16 27,224,994 27,268,772 RGD:2290271
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link 15 29,264,989 29,269,822 RGD:2290271
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component JBrowse link 10 121,957,088 121,975,228 RGD:2290271
G NUDT1 nudix hydrolase 1 JBrowse link 7 2,242,222 2,251,145 RGD:2290271
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2290271
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 11 63,985,853 63,998,420 RGD:2290271
G PAGR1 PAXIP1 associated glutamate rich protein 1 JBrowse link 16 29,816,152 29,822,489 RGD:2290271
G PARK7 Parkinsonism associated deglycase JBrowse link 1 7,961,654 7,985,505 RGD:2290271
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:2290271
G PARP2 poly(ADP-ribose) polymerase 2 JBrowse link 14 20,343,041 20,357,904 RGD:2290271
G PARP3 poly(ADP-ribose) polymerase family member 3 JBrowse link 3 51,942,290 51,948,867 RGD:2290271
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 13 24,420,930 24,512,993 RGD:2290271
G PARPBP PARP1 binding protein JBrowse link 12 102,120,171 102,197,520 RGD:2290271
G PDS5A PDS5 cohesin associated factor A JBrowse link 4 39,822,863 39,977,956 RGD:2290271
G PDS5B PDS5 cohesin associated factor B JBrowse link 13 32,586,432 32,778,019 RGD:2290271
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 15 64,815,632 64,827,173 RGD:2290271
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 49,861,204 49,867,576 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLE2 DNA polymerase epsilon 2, accessory subunit JBrowse link 14 49,643,552 49,688,417 RGD:2290271
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 17 64,477,785 64,497,054 RGD:2290271
G POLH DNA polymerase eta JBrowse link 6 43,576,147 43,620,523 RGD:2290271
G POLI DNA polymerase iota JBrowse link 18 54,269,479 54,321,266 RGD:2290271
G POLK DNA polymerase kappa JBrowse link 5 75,511,308 75,605,820 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
G POLM DNA polymerase mu JBrowse link 7 44,072,062 44,082,540 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PPP5C protein phosphatase 5 catalytic subunit JBrowse link 19 46,347,069 46,390,975 RGD:2290271
G PRPF19 pre-mRNA processing factor 19 JBrowse link 11 60,890,547 60,906,585 RGD:2290271
G PSME4 proteasome activator subunit 4 JBrowse link 2 53,864,069 53,970,993 RGD:2290271
G PTTG1 PTTG1 regulator of sister chromatid separation, securin JBrowse link 5 160,421,855 160,428,744 RGD:2290271
G PWWP3A PWWP domain containing 3A, DNA repair factor JBrowse link 19 1,354,959 1,378,429 RGD:2290271
G RAD1 RAD1 checkpoint DNA exonuclease JBrowse link 5 34,905,260 34,915,504 RGD:2290271
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 5 69,369,297 69,414,801 RGD:2290271
G RAD18 RAD18 E3 ubiquitin protein ligase JBrowse link 3 8,877,075 8,969,249 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RAD51AP1 RAD51 associated protein 1 JBrowse link 12 4,538,890 4,560,047 RGD:2290271
G RAD51B RAD51 paralog B JBrowse link 14 67,819,779 68,683,118 RGD:2290271
G RAD51C RAD51 paralog C JBrowse link 17 58,692,140 58,735,611 RGD:2290271
G RAD51D RAD51 paralog D JBrowse link 17 35,092,221 35,119,869 RGD:2290271
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G RAD54L RAD54 like JBrowse link 1 46,247,688 46,278,477 RGD:2290271
G RAD9A RAD9 checkpoint clamp component A JBrowse link 11 67,391,976 67,398,412 RGD:2290271
G RAD9B RAD9 checkpoint clamp component B JBrowse link 12 110,501,651 110,534,632 RGD:2290271
G RBBP8 RB binding protein 8, endonuclease JBrowse link 18 22,914,121 23,026,486 RGD:2290271
G RBM17 RNA binding motif protein 17 JBrowse link 10 6,089,034 6,117,459 RGD:2290271
G RECQL RecQ like helicase JBrowse link 12 21,468,910 21,501,669 RGD:2290271
G RECQL4 RecQ like helicase 4 JBrowse link 8 144,511,288 144,517,833 RGD:2290271
G RECQL5 RecQ like helicase 5 JBrowse link 17 75,626,845 75,667,202 RGD:2290271
G REV1 REV1 DNA directed polymerase JBrowse link 2 99,400,477 99,490,123 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RMI2 RecQ mediated genome instability 2 JBrowse link 16 11,345,438 11,351,763 RGD:2290271
G RNF113A ring finger protein 113A JBrowse link X 119,870,475 119,871,733 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G RPAIN RPA interacting protein JBrowse link 17 5,419,641 5,433,020 RGD:2290271
G RPS3 ribosomal protein S3 JBrowse link 11 75,399,491 75,422,302 RGD:2290271
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B JBrowse link 8 102,204,501 102,238,961 RGD:2290271
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 20 63,657,810 63,696,253 RGD:2290271
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) JBrowse link 20 63,657,810 63,698,698 RGD:2290271
G RUVBL1 RuvB like AAA ATPase 1 JBrowse link 3 128,064,611 128,153,914 RGD:2290271
G RUVBL2 RuvB like AAA ATPase 2 JBrowse link 19 48,993,448 49,015,995 RGD:2290271
G SHLD1 shieldin complex subunit 1 JBrowse link 20 5,750,286 5,864,407 RGD:2290271
G SHLD2 shieldin complex subunit 2 JBrowse link 10 87,094,478 87,191,468 RGD:2290271
G SHLD3 shieldin complex subunit 3 JBrowse link 5 65,625,027 65,630,928 RGD:2290271
G SHPRH SNF2 histone linker PHD RING helicase JBrowse link 6 145,857,838 145,964,358 RGD:2290271
G SIRT7 sirtuin 7 JBrowse link 17 81,911,939 81,918,176 RGD:2290271
G SLF1 SMC5-SMC6 complex localization factor 1 JBrowse link 5 94,613,476 94,714,918 RGD:2290271
G SLF2 SMC5-SMC6 complex localization factor 2 JBrowse link 10 100,909,416 100,965,134 RGD:2290271
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 16 30,193,843 30,197,566 RGD:2290271
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit JBrowse link 16 29,454,501 29,458,224 RGD:2290271
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 3,579,653 3,611,639 RGD:2290271
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 JBrowse link 2 216,412,484 216,483,053 RGD:2290271
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 22 23,786,966 23,838,009 RGD:2290271
G SMC1A structural maintenance of chromosomes 1A JBrowse link X 53,374,149 53,422,728 RGD:2290271
G SMC3 structural maintenance of chromosomes 3 JBrowse link 10 110,567,695 110,606,048 RGD:2290271
G SMC6 structural maintenance of chromosomes 6 JBrowse link 2 17,663,812 17,753,833 RGD:2290271
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase JBrowse link 16 18,804,858 18,926,428 RGD:2290271
G SSRP1 structure specific recognition protein 1 JBrowse link 11 57,325,986 57,335,892 RGD:2290271
G STN1 STN1 subunit of CST complex JBrowse link 10 103,877,569 103,918,184 RGD:2290271
G STUB1 STIP1 homology and U-box containing protein 1 JBrowse link 16 680,410 682,801 RGD:2290271
G SUMO1 small ubiquitin like modifier 1 JBrowse link 2 202,206,171 202,238,597 RGD:2290271
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit JBrowse link 14 21,351,472 21,384,019 RGD:2290271
G TAOK1 TAO kinase 1 JBrowse link 17 29,390,925 29,551,904 RGD:2290271
G TAOK3 TAO kinase 3 JBrowse link 12 118,149,801 118,372,950 RGD:2290271
G TDG thymine DNA glycosylase JBrowse link 12 103,965,804 103,988,878 RGD:2290271
G TDP1 tyrosyl-DNA phosphodiesterase 1 JBrowse link 14 89,954,923 90,044,768 RGD:2290271
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 8 30,831,544 30,913,008 RGD:2290271
G TFPT TCF3 fusion partner JBrowse link 19 54,107,013 54,115,675 RGD:2290271
G TICRR TOPBP1 interacting checkpoint and replication regulator JBrowse link 15 89,575,469 89,628,023 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:2290271
G TOPBP1 DNA topoisomerase II binding protein 1 JBrowse link 3 133,600,238 133,661,968 RGD:2290271
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough JBrowse link 22 38,290,691 38,398,915 RGD:2290271
G TREX1 three prime repair exonuclease 1 JBrowse link 3 48,465,830 48,467,645 RGD:2290271
G TREX2 three prime repair exonuclease 2 JBrowse link X 153,444,720 153,446,487 RGD:2290271
G TRIM28 tripartite motif containing 28 JBrowse link 19 58,544,064 58,550,722 RGD:2290271
G TRIP12 thyroid hormone receptor interactor 12 JBrowse link 2 229,763,837 229,923,234 RGD:2290271
G TRRAP transformation/transcription domain associated protein JBrowse link 7 98,878,490 99,013,243 RGD:2290271
G TTC5 tetratricopeptide repeat domain 5 JBrowse link 14 20,286,227 20,305,951 RGD:2290271
G UBE2A ubiquitin conjugating enzyme E2 A JBrowse link X 119,574,563 119,584,423 RGD:2290271
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 134,371,569 134,392,108 RGD:2290271
G UBE2D3 ubiquitin conjugating enzyme E2 D3 JBrowse link 4 102,794,383 102,868,893 RGD:2290271
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 202,331,657 202,341,966 RGD:2290271
G UBE2U ubiquitin conjugating enzyme E2 U JBrowse link 1 64,202,802 64,267,381 RGD:2290271
G UBE2W ubiquitin conjugating enzyme E2 W JBrowse link 8 73,780,096 73,878,862 RGD:2290271
G UBQLN4 ubiquilin 4 JBrowse link 1 156,033,129 156,053,798 RGD:2290271
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 8 102,252,273 102,412,700 RGD:2290271
G UCHL5 ubiquitin C-terminal hydrolase L5 JBrowse link 1 193,012,254 193,060,140 RGD:2290271
G UHRF1 ubiquitin like with PHD and ring finger domains 1 JBrowse link 19 4,903,080 4,962,154 RGD:2290271
G UNG uracil DNA glycosylase JBrowse link 12 109,097,597 109,110,992 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271
G USP28 ubiquitin specific peptidase 28 JBrowse link 11 113,797,875 113,875,572 RGD:2290271
G USP3 ubiquitin specific peptidase 3 JBrowse link 15 63,504,511 63,594,640 RGD:2290271
G USP45 ubiquitin specific peptidase 45 JBrowse link 6 99,432,306 99,515,770 RGD:2290271
G USP51 ubiquitin specific peptidase 51 JBrowse link X 55,484,524 55,489,875 RGD:2290271
G UVRAG UV radiation resistance associated JBrowse link 11 75,815,189 76,144,232 RGD:2290271
G VCP valosin containing protein JBrowse link 9 35,056,064 35,072,668 RGD:2290271
G WDHD1 WD repeat and HMG-box DNA binding protein 1 JBrowse link 14 54,938,949 55,027,106 RGD:2290271
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 17 7,686,071 7,703,502 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G XPA XPA, DNA damage recognition and repair factor JBrowse link 9 97,654,398 97,697,409 RGD:2290271
G XPC XPC complex subunit, DNA damage recognition and repair factor JBrowse link 3 14,145,145 14,178,672 RGD:2290271
G XRCC2 X-ray repair cross complementing 2 JBrowse link 7 152,644,776 152,676,141 RGD:2290271
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 103,697,611 103,715,486 RGD:2290271
G ZBTB1 zinc finger and BTB domain containing 1 JBrowse link 14 64,504,574 64,533,693 RGD:2290271
G ZMPSTE24 zinc metallopeptidase STE24 JBrowse link 1 40,258,078 40,294,180 RGD:2290271
G ZRANB3 zinc finger RANBP2-type containing 3 JBrowse link 2 135,164,218 135,531,218 RGD:2290271
DNA replication proofreading term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
DNA synthesis involved in DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP003419.1 novel protein RGD:2290271
G CDKN2D cyclin dependent kinase inhibitor 2D JBrowse link 19 10,566,460 10,568,979 RGD:2290271
G HROB homologous recombination factor with OB-fold JBrowse link 17 44,141,930 44,162,477 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 11 67,350,765 67,353,596 RGD:2290271
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:2290271
G POLH DNA polymerase eta JBrowse link 6 43,576,147 43,620,523 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G SIRT1 sirtuin 1 JBrowse link 10 67,884,656 67,918,390 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G WRNIP1 WRN helicase interacting protein 1 JBrowse link 6 2,765,341 2,786,952 RGD:2290271
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:2290271
G TREX1 three prime repair exonuclease 1 JBrowse link 3 48,465,830 48,467,645 RGD:2290271
double-strand break repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit JBrowse link 4 83,459,517 83,485,137 RGD:2290271
G ACTR5 actin related protein 5 JBrowse link 20 38,748,460 38,772,520 RGD:2290271
G ACTR8 actin related protein 8 JBrowse link 3 53,858,992 53,882,160 RGD:2290271
G APBB1 amyloid beta precursor protein binding family B member 1 JBrowse link 11 6,395,124 6,419,453 RGD:2290271
G APLF aprataxin and PNKP like factor JBrowse link 2 68,467,585 68,580,162 RGD:2290271
G APTX aprataxin JBrowse link 9 32,883,872 33,025,120 RGD:2290271
G BABAM1 BRISC and BRCA1 A complex member 1 JBrowse link 19 17,267,376 17,279,353 RGD:2290271
G BABAM2 BRISC and BRCA1 A complex member 2 JBrowse link 2 27,888,709 28,338,901 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,508 32,400,268 RGD:2290271
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 155,071,403 155,126,766 RGD:2290271
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G CDCA5 cell division cycle associated 5 JBrowse link 11 65,061,009 65,084,129 RGD:2290271
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2290271
G CIB1 calcium and integrin binding 1 JBrowse link 15 90,229,975 90,265,759 RGD:2290271
G DDX1 DEAD-box helicase 1 JBrowse link 2 15,591,868 15,631,101 RGD:2290271
G DTX3L deltex E3 ubiquitin ligase 3L JBrowse link 3 122,564,338 122,575,203 RGD:2290271
G EME1 essential meiotic structure-specific endonuclease 1 JBrowse link 17 50,373,220 50,381,483 RGD:2290271
G EME2 essential meiotic structure-specific endonuclease subunit 2 JBrowse link 16 1,773,222 1,776,714 RGD:2290271
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 JBrowse link 8 27,771,949 27,812,430 RGD:2290271
G EXD2 exonuclease 3'-5' domain containing 2 JBrowse link 14 69,191,477 69,244,020 RGD:2290271
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 8 71,197,433 71,548,104 RGD:2290271
G EYA3 EYA transcriptional coactivator and phosphatase 3 JBrowse link 1 27,970,344 28,088,671 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G GGN gametogenetin JBrowse link 19 38,384,267 38,388,603 RGD:2290271
G H2AX H2A.X variant histone JBrowse link 11 119,093,874 119,095,465 RGD:2290271
G INO80 INO80 complex ATPase subunit JBrowse link 15 40,978,880 41,117,778 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:2290271
G MAD2L2 mitotic arrest deficient 2 like 2 JBrowse link 1 11,674,480 11,691,621 RGD:2290271
G MARF1 meiosis regulator and mRNA stability factor 1 JBrowse link 16 15,594,387 15,643,166 RGD:2290271
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 44,656,417 44,677,086 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:2290271
G MTA1 metastasis associated 1 JBrowse link 14 105,419,827 105,470,729 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G NHEJ1 non-homologous end joining factor 1 JBrowse link 2 219,069,357 219,160,815 RGD:2290271
G NIPBL NIPBL cohesin loading factor JBrowse link 5 36,876,769 37,066,413 RGD:2290271
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:2290271
G PARP2 poly(ADP-ribose) polymerase 2 JBrowse link 14 20,343,041 20,357,904 RGD:2290271
G PARP3 poly(ADP-ribose) polymerase family member 3 JBrowse link 3 51,942,290 51,948,867 RGD:2290271
G PARP9 poly(ADP-ribose) polymerase family member 9 JBrowse link 3 122,527,924 122,564,784 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 47,773,111 47,960,136 RGD:2290271
G RAD21 RAD21 cohesin complex component JBrowse link 8 116,845,934 116,874,776 RGD:2290271
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,226,040 1,255,876 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G REC8 REC8 meiotic recombination protein JBrowse link 14 24,171,931 24,180,408 RGD:2290271
G RNF168 ring finger protein 168 JBrowse link 3 196,468,783 196,503,768 RGD:2290271
G RNF8 ring finger protein 8 JBrowse link 6 37,353,983 37,394,734 RGD:2290271
G SETX senataxin JBrowse link 9 132,261,356 132,356,726 RGD:2290271
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 JBrowse link 18 2,655,726 2,805,017 RGD:2290271
G TDP1 tyrosyl-DNA phosphodiesterase 1 JBrowse link 14 89,954,923 90,044,768 RGD:2290271
G TDP2 tyrosyl-DNA phosphodiesterase 2 JBrowse link 6 24,649,979 24,666,899 RGD:2290271
G TENT4A terminal nucleotidyltransferase 4A JBrowse link 5 6,713,432 6,757,045 RGD:2290271
G TNKS1BP1 tankyrase 1 binding protein 1 JBrowse link 11 57,299,631 57,324,952 RGD:2290271
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290271
G TRIP13 thyroid hormone receptor interactor 13 JBrowse link 5 892,884 919,348 RGD:2290271
G UIMC1 ubiquitin interaction motif containing 1 JBrowse link 5 176,905,005 177,022,640 RGD:2290271
G VCP valosin containing protein JBrowse link 9 35,056,064 35,072,668 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G XRCC4 X-ray repair cross complementing 4 JBrowse link 5 83,077,409 83,370,333 RGD:2290271
G XRCC5 X-ray repair cross complementing 5 JBrowse link 2 216,109,348 216,206,293 RGD:2290271
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G FANCD2 FA complementation group D2 JBrowse link 3 10,026,437 10,101,932 RGD:2290271
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 66,870,757 66,926,436 RGD:2290271
G PRDM9 PR/SET domain 9 JBrowse link 5 23,507,155 23,528,093 RGD:2290271
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 57,329,757 57,343,993 RGD:2290271
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HMCES 5-hydroxymethylcytosine binding, ES cell specific JBrowse link 3 129,278,832 129,306,186 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 47,773,111 47,960,136 RGD:2290271
double-strand break repair via break-induced replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDC45 cell division cycle 45 JBrowse link 22 19,479,294 19,520,612 RGD:2290271
G CDC7 cell division cycle 7 JBrowse link 1 91,498,968 91,525,764 RGD:2290271
G GINS2 GINS complex subunit 2 JBrowse link 16 85,676,198 85,688,954 RGD:2290271
G GINS4 GINS complex subunit 4 JBrowse link 8 41,529,205 41,545,030 RGD:2290271
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:2290271
G MCM3 minichromosome maintenance complex component 3 JBrowse link 6 52,264,015 52,284,742 RGD:2290271
G MCM4 minichromosome maintenance complex component 4 JBrowse link 8 47,960,941 47,978,160 RGD:2290271
G MCM5 minichromosome maintenance complex component 5 JBrowse link 22 35,400,133 35,454,942 RGD:2290271
G MCM6 minichromosome maintenance complex component 6 JBrowse link 2 135,839,626 135,876,443 RGD:2290271
G MCM7 minichromosome maintenance complex component 7 JBrowse link 7 100,092,728 100,101,397 RGD:2290271
G MUS81 MUS81 structure-specific endonuclease subunit JBrowse link 11 65,860,244 65,867,653 RGD:2290271
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 10 49,454,470 49,539,538 RGD:2290271
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 5 60,866,454 60,945,078 RGD:2290271
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:2290271
G UVRAG UV radiation resistance associated JBrowse link 11 75,815,189 76,144,232 RGD:2290271
G XRCC6 X-ray repair cross complementing 6 JBrowse link 22 41,621,163 41,664,048 RGD:2290271
G ZBTB7A zinc finger and BTB domain containing 7A JBrowse link 19 4,043,303 4,066,899 RGD:2290271
double-strand break repair via homologous recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP5S1 adaptor related protein complex 5 subunit sigma 1 JBrowse link 20 3,820,524 3,828,838 RGD:2290271
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 JBrowse link 7 4,775,623 4,794,397 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G AUNIP aurora kinase A and ninein interacting protein JBrowse link 1 25,831,913 25,859,458 RGD:2290271
G BLM BLM RecQ like helicase JBrowse link 15 90,717,346 90,816,166 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,508 32,400,268 RGD:2290271
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 13,920,137 13,952,348 RGD:2290271
G EXD2 exonuclease 3'-5' domain containing 2 JBrowse link 14 69,191,477 69,244,020 RGD:2290271
G FAN1 FANCD2 and FANCI associated nuclease 1 JBrowse link 15 30,903,852 30,943,108 RGD:2290271
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,889,572 5,937,595 RGD:2290271
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:2290271
G GEN1 GEN1 Holliday junction 5' flap endonuclease JBrowse link 2 17,753,687 17,788,946 RGD:2290271
G H2AX H2A.X variant histone JBrowse link 11 119,093,874 119,095,465 RGD:2290271
G HELQ helicase, POLQ like JBrowse link 4 83,407,343 83,455,883 RGD:2290271
G HUS1 HUS1 checkpoint clamp component JBrowse link 7 47,962,980 47,979,619 RGD:2290271
G HUS1B HUS1 checkpoint clamp component B JBrowse link 6 655,939 656,964 RGD:2290271
G INO80 INO80 complex ATPase subunit JBrowse link 15 40,978,880 41,117,778 RGD:2290271
G KASH5 KASH domain containing 5 JBrowse link 19 49,388,218 49,418,002 RGD:2290271
G KDM4D lysine demethylase 4D JBrowse link 11 94,973,709 94,999,519 RGD:2290271
G LIG3 DNA ligase 3 JBrowse link 17 34,980,498 35,009,743 RGD:2290271
G MCM8 minichromosome maintenance 8 homologous recombination repair factor JBrowse link 20 5,950,652 6,000,941 RGD:2290271
G MCM9 minichromosome maintenance 9 homologous recombination repair factor JBrowse link 6 118,813,455 118,935,159 RGD:2290271
G MEIOB meiosis specific with OB-fold JBrowse link 16 1,833,986 1,872,164 RGD:2290271
G MMS22L MMS22 like, DNA repair protein JBrowse link 6 97,142,161 97,283,437 RGD:2290271
G MORF4L1 mortality factor 4 like 1 JBrowse link 15 78,872,781 78,898,139 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G NABP1 nucleic acid binding protein 1 JBrowse link 2 191,678,072 191,690,667 RGD:2290271
G NABP2 nucleic acid binding protein 2 JBrowse link 12 56,222,012 56,229,858 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component JBrowse link 16 27,224,994 27,268,772 RGD:2290271
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 8 125,091,779 125,367,125 RGD:2290271
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 JBrowse link 1 205,712,822 205,750,220 RGD:2290271
G PALB2 partner and localizer of BRCA2 JBrowse link 16 23,603,162 23,641,337 RGD:2290271
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
G POLN DNA polymerase nu JBrowse link 4 2,071,918 2,242,121 RGD:2290271
G POLQ DNA polymerase theta JBrowse link 3 121,431,431 121,545,988 RGD:2290271
G PSMD14 proteasome 26S subunit, non-ATPase 14 JBrowse link 2 161,308,425 161,411,717 RGD:2290271
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,226,040 1,255,876 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
G RAD51AP1 RAD51 associated protein 1 JBrowse link 12 4,538,890 4,560,047 RGD:2290271
G RAD51AP2 RAD51 associated protein 2 JBrowse link 2 17,510,579 17,538,329 RGD:2290271
G RAD51B RAD51 paralog B JBrowse link 14 67,819,779 68,683,118 RGD:2290271
G RAD51C RAD51 paralog C JBrowse link 17 58,692,140 58,735,611 RGD:2290271
G RAD51D RAD51 paralog D JBrowse link 17 35,092,221 35,119,869 RGD:2290271
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:2290271
G RBBP8 RB binding protein 8, endonuclease JBrowse link 18 22,914,121 23,026,486 RGD:2290271
G REC8 REC8 meiotic recombination protein JBrowse link 14 24,171,931 24,180,408 RGD:2290271
G RECQL RecQ like helicase JBrowse link 12 21,468,910 21,501,669 RGD:2290271
G RECQL4 RecQ like helicase 4 JBrowse link 8 144,511,288 144,517,833 RGD:2290271
G RECQL5 RecQ like helicase 5 JBrowse link 17 75,626,845 75,667,202 RGD:2290271
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit JBrowse link 6 111,299,031 111,483,715 RGD:2290271
G RFWD3 ring finger and WD repeat domain 3 JBrowse link 16 74,621,396 74,666,892 RGD:2290271
G RMI1 RecQ mediated genome instability 1 JBrowse link 9 83,980,359 84,004,074 RGD:2290271
G RNF138 ring finger protein 138 JBrowse link 18 32,091,858 32,131,561 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3 replication protein A3 JBrowse link 7 7,636,518 7,718,607 RGD:2290271
G RPA4 replication protein A4 JBrowse link X 96,883,908 96,885,467 RGD:2290271
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 20 36,889,773 36,951,708 RGD:2290271
G SEM1 SEM1 26S proteasome complex subunit JBrowse link 7 96,481,626 96,709,891 RGD:2290271
G SFPQ splicing factor proline and glutamine rich JBrowse link 1 35,176,378 35,193,174 RGD:2290271
G SFR1 SWI5 dependent homologous recombination repair protein 1 JBrowse link 10 104,122,058 104,126,385 RGD:2290271
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 16 30,193,843 30,197,566 RGD:2290271
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit JBrowse link 16 29,454,501 29,458,224 RGD:2290271
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 3,579,653 3,611,639 RGD:2290271
G SMC5 structural maintenance of chromosomes 5 JBrowse link 9 70,258,962 70,354,873 RGD:2290271
G SPIDR scaffold protein involved in DNA repair JBrowse link 8 47,260,878 47,736,306 RGD:2290271
G STN1 STN1 subunit of CST complex JBrowse link 10 103,877,569 103,918,184 RGD:2290271
G SWI5 SWI5 homologous recombination repair protein JBrowse link 9 128,275,364 128,288,990 RGD:2290271
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 JBrowse link 19 11,374,666 11,376,169 RGD:2290271
G TONSL tonsoku like, DNA repair protein JBrowse link 8 144,428,775 144,444,488 RGD:2290271
G UBE2N ubiquitin conjugating enzyme E2 N JBrowse link 12 93,405,684 93,442,336 RGD:2290271
G WDR48 WD repeat domain 48 JBrowse link 3 39,052,002 39,096,671 RGD:2290271
G WRN WRN RecQ like helicase JBrowse link 8 31,033,749 31,176,138 RGD:2290271
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 43,543,311 43,575,527 RGD:2290271
G XRCC2 X-ray repair cross complementing 2 JBrowse link 7 152,644,776 152,676,141 RGD:2290271
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 103,697,611 103,715,486 RGD:2290271
G YY1 YY1 transcription factor JBrowse link 14 100,239,144 100,282,788 RGD:2290271
G ZFYVE26 zinc finger FYVE-type containing 26 JBrowse link 14 67,728,892 67,817,293 RGD:2290271
G ZSWIM7 zinc finger SWIM-type containing 7 JBrowse link 17 15,976,560 15,999,704 RGD:2290271
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit JBrowse link 4 83,459,517 83,485,137 RGD:2290271
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G ATP23 ATP23 metallopeptidase and ATP synthase assembly factor homolog JBrowse link 12 57,941,567 57,959,148 RGD:2290271
G BABAM1 BRISC and BRCA1 A complex member 1 JBrowse link 19 17,267,376 17,279,353 RGD:2290271
G BABAM2 BRISC and BRCA1 A complex member 2 JBrowse link 2 27,888,709 28,338,901 RGD:2290271
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2 214,725,645 214,809,683 RGD:2290271
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:2290271
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 155,071,403 155,126,766 RGD:2290271
G CYREN cell cycle regulator of NHEJ JBrowse link 7 135,092,303 135,170,826 RGD:2290271
G DCLRE1A DNA cross-link repair 1A JBrowse link 10 113,834,725 113,854,394 RGD:2290271
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 113,904,619 113,914,086 RGD:2290271
G DCLRE1C DNA cross-link repair 1C JBrowse link 10 14,897,359 14,954,432 RGD:2290271
G DNTT DNA nucleotidylexotransferase JBrowse link 10 96,304,434 96,338,564 RGD:2290271
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 45,407,334 45,451,547 RGD:2290271
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 13,920,137 13,952,348 RGD:2290271
G H2AX H2A.X variant histone JBrowse link 11 119,093,874 119,095,465 RGD:2290271
G H3-4 H3.4 histone JBrowse link 1 228,424,845 228,425,360 RGD:2290271
G H4-16 H4 histone 16 JBrowse link 12 14,770,720 14,771,131 RGD:2290271
G H4C1 H4 clustered histone 1 JBrowse link 6 26,021,649 26,022,050 RGD:2290271
G H4C11 H4 clustered histone 11 JBrowse link 6 27,824,092 27,824,480 RGD:2290271
G H4C12 H4 clustered histone 12 JBrowse link 6 27,831,174 27,831,560 RGD:2290271
G H4C13 H4 clustered histone 13 JBrowse link 6 27,873,148 27,873,534 RGD:2290271
G H4C14 H4 clustered histone 14 JBrowse link 1 149,832,657 149,833,052 RGD:2290271
G H4C15 H4 clustered histone 15 JBrowse link 1
1
149,860,764
149,853,262
149,861,159
149,860,683
RGD:2290271
G H4C2 H4 clustered histone 2 JBrowse link 6 26,026,896 26,027,283 RGD:2290271
G H4C3 H4 clustered histone 3 JBrowse link 6 26,103,933 26,104,337 RGD:2290271
G H4C4 H4 clustered histone 4 JBrowse link 6 26,188,710 26,189,112 RGD:2290271
G H4C5 H4 clustered histone 5 JBrowse link 6 26,204,610 26,205,021 RGD:2290271
G H4C6 H4 clustered histone 6 JBrowse link 6 26,240,393 26,240,793 RGD:2290271
G H4C8 H4 clustered histone 8 JBrowse link 6 26,285,126 26,285,534 RGD:2290271
G H4C9 H4 clustered histone 9 JBrowse link 6 27,139,282 27,139,678 RGD:2290271
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 15 28,111,040 28,322,179 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G KDM2A lysine demethylase 2A JBrowse link 11 67,119,263 67,258,082 RGD:2290271
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:2290271
G MDC1 mediator of DNA damage checkpoint 1 JBrowse link 6 30,699,807 30,717,988 RGD:2290271
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G NBN nibrin JBrowse link 8 89,933,331 89,984,724 RGD:2290271
G NHEJ1 non-homologous end joining factor 1 JBrowse link 2 219,069,357 219,160,815 RGD:2290271
G NSD2 nuclear receptor binding SET domain protein 2 JBrowse link 4 1,871,393 1,982,207 RGD:2290271
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 8 125,091,779 125,367,125 RGD:2290271
G PAXIP1 PAX interacting protein 1 JBrowse link 7 154,943,690 155,003,419 RGD:2290271
G PAXX PAXX non-homologous end joining factor JBrowse link 9 136,992,422 136,993,976 RGD:2290271
G PIAS4 protein inhibitor of activated STAT 4 JBrowse link 19 4,007,736 4,039,386 RGD:2290271
G POLA1 DNA polymerase alpha 1, catalytic subunit JBrowse link X 24,693,877 24,996,986 RGD:2290271
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:2290271
G POLL DNA polymerase lambda JBrowse link 10 101,578,882 101,588,319 RGD:2290271
G POLM DNA polymerase mu JBrowse link 7 44,072,062 44,082,540 RGD:2290271
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 47,773,111 47,960,136 RGD:2290271
G PRPF19 pre-mRNA processing factor 19 JBrowse link 11 60,890,547 60,906,585 RGD:2290271
G PSMD14 proteasome 26S subunit, non-ATPase 14 JBrowse link 2 161,308,425 161,411,717 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RIF1 replication timing regulatory factor 1 JBrowse link 2 151,409,902 151,534,200 RGD:2290271
G RNF168 ring finger protein 168 JBrowse link 3 196,468,783 196,503,768 RGD:2290271
G RNF8 ring finger protein 8 JBrowse link 6 37,353,983 37,394,734 RGD:2290271
G SETMAR SET domain and mariner transposase fusion gene JBrowse link 3 4,303,304 4,320,649 RGD:2290271
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 JBrowse link 2 216,412,484 216,483,053 RGD:2290271
G SMC5 structural maintenance of chromosomes 5 JBrowse link 9 70,258,962 70,354,873 RGD:2290271
G SUMO1 small ubiquitin like modifier 1 JBrowse link 2 202,206,171 202,238,597 RGD:2290271
G TP53BP1 tumor protein p53 binding protein 1 JBrowse link 15 43,403,061 43,510,640 RGD:2290271
G UBE2N ubiquitin conjugating enzyme E2 N JBrowse link 12 93,405,684 93,442,336 RGD:2290271
G UBE2V2 ubiquitin conjugating enzyme E2 V2 JBrowse link 8 47,997,527 48,064,708 RGD:2290271
G UIMC1 ubiquitin interaction motif containing 1 JBrowse link 5 176,905,005 177,022,640 RGD:2290271
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 43,543,311 43,575,527 RGD:2290271
G XRCC4 X-ray repair cross complementing 4 JBrowse link 5 83,077,409 83,370,333 RGD:2290271
G XRCC5 X-ray repair cross complementing 5 JBrowse link 2 216,109,348 216,206,293 RGD:2290271
G XRCC6 X-ray repair cross complementing 6 JBrowse link 22 41,621,163 41,664,048 RGD:2290271
double-strand break repair via single-strand annealing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD52 RAD52 homolog, DNA repair protein JBrowse link 12 911,028 991,195 RGD:2290271
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FANCM FA complementation group M JBrowse link 14 45,135,930 45,200,890 RGD:2290271
G RAD54L RAD54 like JBrowse link 1 46,247,688 46,278,477 RGD:2290271
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 103,697,611 103,715,486 RGD:2290271
error-free postreplication DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G UBE2V2 ubiquitin conjugating enzyme E2 V2 JBrowse link 8 47,997,527 48,064,708 RGD:2290271
error-free translesion synthesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NPLOC4 NPL4 homolog, ubiquitin recognition factor JBrowse link 17 81,556,885 81,637,148 RGD:2290271
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2290271
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:2290271
G POLDIP2 DNA polymerase delta interacting protein 2 JBrowse link 17 28,346,628 28,357,589 RGD:2290271
G POLH DNA polymerase eta JBrowse link 6 43,576,147 43,620,523 RGD:2290271
G RCHY1 ring finger and CHY zinc finger domain containing 1 JBrowse link 4 75,479,037 75,515,057 RGD:2290271
G REV1 REV1 DNA directed polymerase JBrowse link 2 99,400,477 99,490,123 RGD:2290271
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:2290271
G RFC2 replication factor C subunit 2 JBrowse link 7 74,231,502 74,254,458 RGD:2290271
G RFC3 replication factor C subunit 3 JBrowse link 13 33,818,069 33,973,946 RGD:2290271
G RFC4 replication factor C subunit 4 JBrowse link 3 186,789,892 186,806,695 RGD:2290271
G RFC5 replication factor C subunit 5 JBrowse link 12 118,016,661 118,033,564 RGD:2290271
G RPA1 replication protein A1 JBrowse link 17 1,830,005 1,900,082 RGD:2290271
G RPA2 replication protein A2 JBrowse link 1 27,891,524 27,914,797 RGD:2290271
G RPA3