Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear pore organization
go back to main search page
Accession:GO:0006999 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear pore.
Synonyms:exact_synonym: nuclear pore organisation
 related_synonym: nuclear pore complex organization and biogenesis;   nuclear pore organization and biogenesis


show annotations for term's descendants           Sort by:
 
nuclear pore organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc1 NDC1 transmembrane nucleoporin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:126,976,636...127,022,941
Ensembl chr 5:126,976,456...127,022,939
JBrowse link
G Nup133 nucleoporin 133 ISO (PMID:15146057) RGD PMID:15146057 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Nup205 nucleoporin 205 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:62,703,779...62,773,931
Ensembl chr 4:62,703,779...62,773,923
JBrowse link
G Nup35 nucleoporin 35 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:67,866,784...67,896,828
Ensembl chr 3:67,870,111...67,896,153
JBrowse link
G Nup54 nucleoporin 54 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,123,434...17,141,832
Ensembl chr14:17,123,360...17,141,767
JBrowse link
G Pom121 POM121 transmembrane nucleoporin IDA RGD PMID:8335683 RGD:729484 NCBI chr12:24,316,575...24,341,943
Ensembl chr12:24,324,590...24,341,938
JBrowse link
G Seh1l SEH1-like nucleoporin ISO (PMID:15146057) RGD PMID:15146057 NCBI chr18:63,545,150...63,568,101 JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT ISO
ISS
(PMID:15229283)
GO_REF:0000024
(PMID:11952838)
RGD
UniProt
PMID:11952838, PMID:15229283 GO_REF:0000024 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link
nuclear pore complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT hook containing transcription factor 1 ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:98,023,528...98,079,138
Ensembl chr13:98,023,430...98,078,946
JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin IEA
ISO
GO_REF:0000107
(PMID:16600873)
Ensembl
RGD
PMID:16600873 GO_REF:0000107 NCBI chr 5:126,976,636...127,022,941
Ensembl chr 5:126,976,456...127,022,939
JBrowse link
G Nup107 nucleoporin 107 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15229283)
Ensembl
UniProt
RGD
PMID:15229283 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:60,781,724...60,825,225
Ensembl chr 7:60,781,729...60,825,242
JBrowse link
G Nup153 nucleoporin 153 IEA
ISO
ISS
GO_REF:0000107
(PMID:12802065), (PMID:15229283)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12802065, PMID:15229283 GO_REF:0000024, GO_REF:0000107 NCBI chr17:18,358,712...18,411,368
Ensembl chr17:18,358,712...18,411,368
JBrowse link
G Nup205 nucleoporin 205 ISO (PMID:15229283) RGD PMID:15229283 NCBI chr 4:62,703,779...62,773,931
Ensembl chr 4:62,703,779...62,773,923
JBrowse link
G Nup93 nucleoporin 93 ISS
ISO
GO_REF:0000024
(PMID:15229283), (PMID:26878725)
UniProt
RGD
PMID:15229283, PMID:26878725 GO_REF:0000024 NCBI chr19:11,159,769...11,263,980
Ensembl chr19:11,159,774...11,263,980
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO
ISS
(PMID:15229283)
GO_REF:0000024
RGD
UniProt
PMID:15229283 GO_REF:0000024 NCBI chr 1:167,213,866...167,308,851
Ensembl chr 1:167,213,866...167,308,851
JBrowse link
G Rtn4 reticulon 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:26906412)
Ensembl
UniProt
RGD
PMID:26906412 GO_REF:0000024, GO_REF:0000107 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G Tmem170a transmembrane protein 170A ISO (PMID:26906412) RGD PMID:26906412 NCBI chr19:44,090,418...44,101,365
Ensembl chr19:44,088,612...44,101,365
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT IMP
ISO
PMID:11839768
(PMID:12802065)
RGD PMID:12802065, PMID:11839768 RGD:8553300 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      cellular component organization or biogenesis 6765
        cellular component organization 6509
          protein-containing complex subunit organization 1808
            nuclear pore organization 15
              nuclear pore complex assembly + 10
Path 2
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      cellular component organization or biogenesis 6765
        cellular component organization 6509
          organelle organization 4072
            nucleus organization 128
              nuclear pore organization 15
                nuclear pore complex assembly + 10
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.