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ONTOLOGY REPORT - ANNOTATIONS


Term:microtubule depolymerization
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Accession:GO:0007019 term browser browse the term
Definition:The removal of tubulin heterodimers from one or both ends of a microtubule.
Synonyms:exact_synonym: microtubule disassembly;   microtubule shortening
 narrow_synonym: microtubule catastrophe;   microtubule depolymerization during nuclear congression


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microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF18A kinesin family member 18A JBrowse link 2 32,244,073 32,331,392 RGD:14298760
G KIF18B kinesin family member 18B JBrowse link 12 18,426,828 18,448,214 RGD:14298760
G KIF24 kinesin family member 24 JBrowse link 10 32,454,615 32,552,763 RGD:14298760
G KIF2B kinesin family member 2B JBrowse link 12 30,161,677 30,163,731 RGD:14298760
G KIF2C kinesin family member 2C JBrowse link 6 166,556,765 166,577,904 RGD:14298760
G NCKAP5 NCK associated protein 5 JBrowse link 15 18,411,093 19,462,362 RGD:14298760
G NCKAP5L NCK associated protein 5 like JBrowse link 5 15,711,242 15,761,401 RGD:14298760
G SMN1 survival of motor neuron 1, telomeric JBrowse link 16 47,738,776 47,777,381 RGD:14298760
G STMN1 stathmin 1 JBrowse link 6 83,356,404 83,362,546 RGD:14298760
G STMN2 stathmin 2 JBrowse link 4 56,952,968 57,006,744 RGD:14298760
G STMN3 stathmin 3 JBrowse link 17 62,600,450 62,609,851 RGD:14298760
G STMN4 stathmin 4 JBrowse link 14 10,986,510 11,007,757 RGD:14298760
G STMND1 stathmin domain containing 1 JBrowse link 7 13,013,028 13,040,145 RGD:14298760
axonemal microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF19 kinesin family member 19 JBrowse link 12 6,775,695 6,803,066 RGD:14298760
mitotic spindle microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCSAP centriole, cilia and spindle associated protein JBrowse link 14 60,445,052 60,465,761 RGD:14298760
negative regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 2 116,913,354 116,985,303 RGD:14298760
G APC2 APC regulator of WNT signaling pathway 2 JBrowse link 2 77,005,706 77,034,583 RGD:14298760
G ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 JBrowse link 4 94,026,391 94,082,206 RGD:14298760
G BMERB1 bMERB domain containing 1 JBrowse link 3 7,248,806 7,387,523 RGD:14298760
G CAMSAP1 calmodulin regulated spectrin associated protein 1 RGD:14298760
G CAMSAP2 calmodulin regulated spectrin associated protein family member 2 JBrowse link 10 23,275,302 23,360,167 RGD:14298760
G CAMSAP3 calmodulin regulated spectrin associated protein family member 3 JBrowse link 2 71,531,607 71,547,413 RGD:14298760
G CIB1 calcium and integrin binding 1 JBrowse link 7 55,794,834 55,798,666 RGD:14298760
G CKAP2 cytoskeleton associated protein 2 JBrowse link 11 15,751,717 15,767,068 RGD:14298760
G CLASP1 cytoplasmic linker associated protein 1 JBrowse link 15 29,782,613 30,042,727 RGD:14298760
G FGF13 fibroblast growth factor 13 JBrowse link X 113,460,191 113,955,691 RGD:14298760
G GAS2L1 growth arrest specific 2 like 1 JBrowse link 14 46,449,767 46,455,278 RGD:14298760
G HDAC6 histone deacetylase 6 JBrowse link X 42,917,911 42,941,894 RGD:14298760
G HDGFL3 HDGF like 3 JBrowse link 7 51,730,898 51,818,666 RGD:14298760
G MAP6D1 MAP6 domain containing 1 JBrowse link 13 121,738,392 121,755,482 RGD:14298760
G MID1IP1 MID1 interacting protein 1 JBrowse link X 34,763,360 34,766,160 RGD:14298760
G NAV3 neuron navigator 3 JBrowse link 5 103,013,798 103,863,222 RGD:14298760
G SPEF1 sperm flagellar 1 JBrowse link 17 31,934,856 31,938,463 RGD:14298760
G STMN2 stathmin 2 JBrowse link 4 56,952,968 57,006,744 RGD:14298760
G TAOK1 TAO kinase 1 JBrowse link 12 45,597,067 45,750,117 RGD:14298760
G TTBK2 tau tubulin kinase 2 JBrowse link 1 128,489,676 128,640,094 RGD:14298760
plus-end specific microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF19 kinesin family member 19 JBrowse link 12 6,775,695 6,803,066 RGD:14298760
positive regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KATNB1 katanin regulatory subunit B1 JBrowse link 6 19,630,355 19,659,039 RGD:14298760
G SPAST spastin JBrowse link 3 107,439,810 107,508,915 RGD:14298760
G STMN2 stathmin 2 JBrowse link 4 56,952,968 57,006,744 RGD:14298760
regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAP1A microtubule associated protein 1A JBrowse link 1 127,916,639 127,936,952 RGD:14298760
G MAP1B microtubule associated protein 1B JBrowse link 16 48,403,338 48,501,453 RGD:14298760
G MAP1S microtubule associated protein 1S JBrowse link 2 60,003,116 60,043,133 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15257
    cellular process 13567
      cellular component organization 4540
        supramolecular fiber organization 520
          microtubule depolymerization 40
            astral microtubule depolymerization + 0
            cytoplasmic microtubule depolymerization + 1
            minus-end specific microtubule depolymerization 0
            mitotic spindle microtubule depolymerization 1
            negative regulation of microtubule depolymerization + 21
            plus-end specific microtubule depolymerization 1
            positive regulation of microtubule depolymerization 3
            regulation of microtubule depolymerization + 26
Path 2
Term Annotations click to browse term
  biological_process 15257
    cellular process 13567
      cellular component organization 4540
        organelle organization 2866
          cytoskeleton organization 1056
            microtubule cytoskeleton organization 470
              microtubule polymerization or depolymerization 88
                microtubule depolymerization 40
                  astral microtubule depolymerization + 0
                  cytoplasmic microtubule depolymerization + 1
                  minus-end specific microtubule depolymerization 0
                  mitotic spindle microtubule depolymerization 1
                  negative regulation of microtubule depolymerization + 21
                  plus-end specific microtubule depolymerization 1
                  positive regulation of microtubule depolymerization 3
                  regulation of microtubule depolymerization + 26
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.