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ONTOLOGY REPORT - ANNOTATIONS


Term:peroxisome organization
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Accession:GO:0007031 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.
Synonyms:exact_synonym: peroxisome organisation
 related_synonym: peroxisome organization and biogenesis;   peroxisome-assembly ATPase activity


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peroxisome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link 2 225,335,708 225,389,120 RGD:1624291
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 4 27,659,376 27,698,037 RGD:1624291
RGD:13792537
G Pex10 peroxisomal biogenesis factor 10 JBrowse link 5 172,469,978 172,475,144 RGD:1624291
G Pex11a peroxisomal biogenesis factor 11 alpha JBrowse link 1 141,474,189 141,481,270 RGD:1624291
RGD:1600115
G Pex11b peroxisomal biogenesis factor 11 beta JBrowse link 2 198,762,138 198,771,040 RGD:1624291
G Pex12 peroxisomal biogenesis factor 12 JBrowse link 10 70,512,785 70,516,494 RGD:729522
RGD:1624291
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:68287
RGD:1624291
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
RGD:13792537
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
G Pex2 peroxisomal biogenesis factor 2 JBrowse link 2 98,251,756 98,269,185 RGD:1624291
G Pex3 peroxisomal biogenesis factor 3 JBrowse link 1 7,685,209 7,726,238 RGD:633588
RGD:1624291
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:729462
RGD:13792537
RGD:1624291
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
G Plaat1 phospholipase A and acyltransferase 1 JBrowse link 11 75,125,951 75,145,868 RGD:1624291
G Plaat3 phospholipase A and acyltransferase 3 JBrowse link 1 222,844,238 222,877,180 RGD:1624291
RGD:1600115
G Scp2 sterol carrier protein 2 JBrowse link 5 127,647,934 127,735,703 RGD:1624291
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 13 75,153,074 75,216,941 RGD:1624291
G Tmem135 transmembrane protein 135 JBrowse link 1 152,886,496 153,096,225 RGD:8554008
ER-dependent peroxisome localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
ER-dependent peroxisome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
establishment of protein localization to peroxisome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
peroxisome fission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot8 acyl-CoA thioesterase 8 JBrowse link 3 161,260,837 161,272,495 RGD:1600115
RGD:1624291
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:1624291
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:1600115
RGD:1624291
G Fis1 fission, mitochondrial 1 JBrowse link 12 22,750,485 22,765,324 RGD:1600115
RGD:13792537
RGD:1624291
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:1624291
G Pex11a peroxisomal biogenesis factor 11 alpha JBrowse link 1 141,474,189 141,481,270 RGD:1624291
RGD:13792537
G Pex11b peroxisomal biogenesis factor 11 beta JBrowse link 2 198,762,138 198,771,040 RGD:1624291
RGD:13792537
G Pex11g peroxisomal biogenesis factor 11 gamma JBrowse link 12 2,000,426 2,007,516 RGD:1624291
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor JBrowse link 13 75,153,074 75,216,941 RGD:1624291
peroxisome membrane biogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex11a peroxisomal biogenesis factor 11 alpha JBrowse link 1 141,474,189 141,481,270 RGD:633614
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
G Pex3 peroxisomal biogenesis factor 3 JBrowse link 1 7,685,209 7,726,238 RGD:633588
protein import into peroxisome matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC108348326 peroxisome assembly protein 12 RGD:13792537
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1600115
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 4 27,659,376 27,698,037 RGD:1624291
RGD:13792537
G Pex10 peroxisomal biogenesis factor 10 JBrowse link 5 172,469,978 172,475,144 RGD:1624291
RGD:13792537
G Pex12 peroxisomal biogenesis factor 12 JBrowse link 10 70,512,785 70,516,494 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
G Pex2 peroxisomal biogenesis factor 2 JBrowse link 2 98,251,756 98,269,185 RGD:1624291
G Pex26 peroxisomal biogenesis factor 26 JBrowse link 4 153,747,715 153,760,446 RGD:1624291
RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:13792537
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
RGD:13792537
protein import into peroxisome matrix, docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690024 peroxisomal targeting signal 1 receptor-like JBrowse link 4 156,403,016 156,428,237 RGD:13792537
G Pex13 peroxisomal biogenesis factor 13 JBrowse link 14 108,394,299 108,411,994 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
RGD:13792537
G Pex5l peroxisomal biogenesis factor 5-like JBrowse link 2 119,330,330 119,405,809 RGD:13792537
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
protein import into peroxisome matrix, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:1624291
protein import into peroxisome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
RGD:13792537
G Pex26 peroxisomal biogenesis factor 26 JBrowse link 4 153,747,715 153,760,446 RGD:1600115
G Pex3 peroxisomal biogenesis factor 3 JBrowse link 1 7,685,209 7,726,238 RGD:1624291
RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:1624291
protein targeting to peroxisome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hacl1 2-hydroxyacyl-CoA lyase 1 JBrowse link 16 7,720,047 7,758,119 RGD:1624291
RGD:1600115
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1624291
RGD:13792537
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 4 27,659,376 27,698,037 RGD:1624291
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
G Pex19 peroxisomal biogenesis factor 19 JBrowse link 13 90,514,324 90,530,825 RGD:1624291
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:1624291
RGD:13792537
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
G Zfand6 zinc finger AN1-type containing 6 JBrowse link 1 146,745,850 146,823,762 RGD:1624291
RGD:13792537
RGD:1600115
regulation of peroxisome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:1624291
G Mavs mitochondrial antiviral signaling protein JBrowse link 3 123,776,147 123,790,572 RGD:1624291
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          organelle organization 4011
            peroxisome organization 36
              ER-dependent peroxisome organization 1
              glyoxysome organization 0
              peroxisome disassembly 0
              peroxisome fission 10
              peroxisome inheritance 0
              peroxisome membrane biogenesis 4
              positive regulation of peroxisome organization 0
              protein localization to peroxisome + 20
              regulation of peroxisome organization + 3
              vesicle fusion with peroxisome 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.