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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell junction assembly
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Accession:GO:0007043 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a junction between cells.
Synonyms:exact_synonym: intercellular junction assembly
 xref: MIPS_funcat:42.06;   MIPS_funcat:42.06.04


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cell-cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07034767.1 RGD:13792537
G Arvcf ARVCF, delta catenin family member JBrowse link 11 86,736,125 86,793,795 RGD:13792537
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:13792537
G Cdh10 cadherin 10 JBrowse link 2 69,415,174 69,636,849 RGD:13792537
G Cdh11 cadherin 11 JBrowse link 19 2,391,181 2,551,245 RGD:13792537
G Cdh12 cadherin 12 JBrowse link 2 71,310,228 72,540,063 RGD:13792537
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:13792537
G Cdh15 cadherin 15 JBrowse link 19 55,669,661 55,689,986 RGD:13792537
G Cdh17 cadherin 17 JBrowse link 5 25,354,187 25,443,675 RGD:13792537
G Cdh18 cadherin 18 JBrowse link 2 73,651,408 74,693,342 RGD:13792537
G Cdh19 cadherin 19 JBrowse link 13 32,344,954 32,469,887 RGD:13792537
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:13792537
G Cdh24 cadherin 24 JBrowse link 15 33,277,845 33,287,546 RGD:13792537
G Cdh26 cadherin 26 JBrowse link 3 173,969,004 174,020,867 RGD:13792537
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:13792537
G Cdh4 cadherin 4 JBrowse link 3 175,220,520 175,283,144 RGD:13792537
G Cdh5 cadherin 5 JBrowse link 19 1,025,122 1,074,333 RGD:1624291
RGD:13792537
G Cdh6 cadherin 6 JBrowse link 2 63,100,723 63,246,618 RGD:13792537
G Cdh7 cadherin 7 JBrowse link 13 31,081,064 31,228,884 RGD:13792537
G Cdh8 cadherin 8 JBrowse link 19 6,031,654 6,431,502 RGD:13792537
G Cdh9 cadherin 9 JBrowse link 2 66,938,796 67,078,897 RGD:13792537
G Cldn5 claudin 5 JBrowse link 11 86,356,292 86,357,718 RGD:1624291
G Ctnnd1 catenin delta 1 JBrowse link 3 72,001,904 72,053,047 RGD:13792537
G Ctnnd2 catenin delta 2 JBrowse link 2 83,227,247 84,094,315 RGD:13792537
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:1624291
RGD:1600115
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:1624291
RGD:1600115
G Hdac7 histone deacetylase 7 JBrowse link 7 139,280,396 139,319,108 RGD:1624291
RGD:1600115
G Heg1 heart development protein with EGF-like domains 1 JBrowse link 11 70,234,248 70,322,966 RGD:1600115
G Lin7b lin-7 homolog B, crumbs cell polarity complex component JBrowse link 1 101,358,313 101,361,439 RGD:633233
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1600115
RGD:1624291
G Pard6b par-6 family cell polarity regulator beta JBrowse link 3 164,822,111 164,843,395 RGD:1600115
G Pkp1 plakophilin 1 JBrowse link 13 52,705,174 52,753,089 RGD:13792537
G Pkp3 plakophilin 3 JBrowse link 1 213,884,795 213,897,783 RGD:13792537
G Pkp4 plakophilin 4 JBrowse link 3 45,211,097 45,414,524 RGD:1624291
RGD:13792537
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:1624291
RGD:1600115
adherens junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin, beta JBrowse link 12 13,715,843 13,718,813 RGD:1600115
RGD:1624291
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link 2 206,224,015 206,274,910 RGD:1624291
RGD:1600115
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:1624291
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link 11 72,829,407 72,865,815 RGD:1624291
G Ramp2 receptor activity modifying protein 2 JBrowse link 10 89,166,170 89,168,962 RGD:1624291
RGD:1600115
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:1624291
RGD:1600115
G Tbcd tubulin folding cofactor D JBrowse link 10 110,643,693 110,800,493 RGD:13792537
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1624291
RGD:1600115
G Zfp703 zinc finger protein 703 JBrowse link 16 69,237,857 69,242,028 RGD:1624291
apical junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn19 claudin 19 JBrowse link 5 138,300,692 138,307,982 RGD:1624291
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:1624291
G Fbf1 Fas binding factor 1 JBrowse link 10 104,692,791 104,718,630 RGD:1624291
G Pkn2 protein kinase N2 JBrowse link 2 248,735,699 248,840,735 RGD:1600115
RGD:1624291
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Rhoc ras homolog family member C JBrowse link 2 207,271,692 207,278,010 RGD:1624291
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1600115
RGD:1624291
G Wdr1 WD repeat domain 1 JBrowse link 14 76,990,014 77,023,739 RGD:1624291
bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07024637.1 RGD:1600115
G Actn4 actinin alpha 4 JBrowse link 1 87,078,012 87,147,347 RGD:1624291
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:1624291
G Alox12b arachidonate 12-lipoxygenase, 12R type JBrowse link 10 55,744,646 55,756,524 RGD:1624291
G Aloxe3 arachidonate lipoxygenase 3 JBrowse link 10 55,711,996 55,735,915 RGD:1624291
G Arl2 ADP-ribosylation factor like GTPase 2 JBrowse link 1 221,504,150 221,516,191 RGD:1600115
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:1624291
G Cdh5 cadherin 5 JBrowse link 19 1,025,122 1,074,333 RGD:1624291
RGD:1600115
G Cgn cingulin JBrowse link 2 195,909,691 195,937,130 RGD:1624291
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:1624291
G Cldn3 claudin 3 JBrowse link 12 21,831,341 21,832,813 RGD:1624291
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1624291
RGD:1600115
G Ect2 epithelial cell transforming 2 JBrowse link 2 112,769,385 112,831,476 RGD:1624291
G Esam endothelial cell adhesion molecule JBrowse link 8 39,997,875 40,008,802 RGD:1624291
G Frmpd2 FERM and PDZ domain containing 2 JBrowse link 16 9,745,171 9,879,490 RGD:1624291
G Grhl2 grainyhead-like transcription factor 2 JBrowse link 7 76,058,623 76,197,360 RGD:1624291
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:2325293
G Marveld2 MARVEL domain containing 2 JBrowse link 2 30,612,746 30,634,308 RGD:1624291
G Marveld3 MARVEL domain containing 3 JBrowse link 19 41,710,076 41,724,923 RGD:1624291
G Micall2 MICAL-like 2 JBrowse link 12 16,988,013 17,016,794 RGD:1624291
RGD:1600115
G Mpp5 membrane palmitoylated protein 5 JBrowse link 6 101,923,675 102,029,705 RGD:1600115
G Mpp7 membrane palmitoylated protein 7 JBrowse link 17 60,057,077 60,250,303 RGD:1624291
G Mtdh metadherin JBrowse link 7 72,771,018 72,830,599 RGD:1359738
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:1624291
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link 11 72,829,407 72,865,815 RGD:1624291
G Pard3 par-3 family cell polarity regulator JBrowse link 19 60,017,746 60,580,628 RGD:8553352
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,145 RGD:1624291
RGD:1600115
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:1624291
G Pof1b POF1B, actin binding protein JBrowse link X 84,099,618 84,167,717 RGD:1624291
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:1600115
RGD:1624291
G Ramp2 receptor activity modifying protein 2 JBrowse link 10 89,166,170 89,168,962 RGD:1624291
RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G Tbcd tubulin folding cofactor D JBrowse link 10 110,643,693 110,800,493 RGD:13792537
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:1624291
G Wnt11 Wnt family member 11 JBrowse link 1 163,794,136 163,813,756 RGD:1624291
desmosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07034767.1 RGD:1600115
G Jup junction plakoglobin JBrowse link 10 88,280,517 88,307,451 RGD:1624291
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:1624291
G Pkp3 plakophilin 3 JBrowse link 1 213,884,795 213,897,783 RGD:1624291
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1624291
RGD:1600115
gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:2289808
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:8554661
G Gja5 gap junction protein, alpha 5 JBrowse link 2 199,162,745 199,184,942 RGD:1624291
G Gjb2 gap junction protein, beta 2 JBrowse link 15 37,377,313 37,394,494 RGD:1624291
G Gjb6 gap junction protein, beta 6 JBrowse link 15 37,400,888 37,411,656 RGD:1624291
G Gjc1 gap junction protein, gamma 1 JBrowse link 10 90,781,408 90,912,440 RGD:1624291
G Gjd3 gap junction protein, delta 3 JBrowse link 10 86,888,982 86,891,915 RGD:1624291
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:6784510
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:1600115
RGD:1624291
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1600115
RGD:1624291
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:1600115
RGD:1624291
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:11041641
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
negative regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1624291
RGD:1600115
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1624291
RGD:1600115
G Mir23a microRNA 23a JBrowse link 19 25,318,582 25,318,656 RGD:13592600
paranodal junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ank2 ankyrin 2 JBrowse link 2 231,224,643 231,522,655 RGD:1599119
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:1624291
RGD:1600115
G Cntnap1 contactin associated protein 1 JBrowse link 10 89,087,904 89,103,615 RGD:6483326
RGD:1624291
RGD:1600115
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 JBrowse link 9 117,314,935 117,666,408 RGD:1624291
G Gnpat glyceronephosphate O-acyltransferase JBrowse link 19 57,614,813 57,640,524 RGD:1624291
G Nfasc neurofascin JBrowse link 13 49,335,407 49,522,474 RGD:1624291
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Ugt8 UDP glycosyltransferase 8 JBrowse link 2 229,644,373 229,718,678 RGD:1624291
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:11341733
G Cldn3 claudin 3 JBrowse link 12 21,831,341 21,832,813 RGD:1624291
G Cldn5 claudin 5 JBrowse link 11 86,356,292 86,357,718 RGD:1624291
G Epha2 Eph receptor A2 JBrowse link 5 159,845,773 159,874,203 RGD:1624291
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:1624291
G Nphp1 nephrocystin 1 JBrowse link 3 120,316,048 120,370,089 RGD:1624291
RGD:1600115
G Nphp4 nephrocystin 4 JBrowse link 5 169,647,581 169,744,662 RGD:1624291
positive regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace2 angiotensin I converting enzyme 2 JBrowse link X 32,050,734 32,095,860 RGD:1624291
RGD:1600115
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1624291
RGD:1600115
regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F11r F11 receptor JBrowse link 13 89,826,272 89,850,151 RGD:1624291
RGD:1600115
G Fzd5 frizzled class receptor 5 JBrowse link 9 71,443,784 71,445,541 RGD:1624291
RGD:1600115
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6784505
G Gpbar1 G protein-coupled bile acid receptor 1 JBrowse link 9 81,555,914 81,560,931 RGD:1624291
G Myo1c myosin 1C JBrowse link 10 63,803,311 63,819,614 RGD:1624291
G Nedd4l NEDD4 like E3 ubiquitin protein ligase JBrowse link 18 60,392,376 60,719,720 RGD:1624291
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:6784505
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Prkch protein kinase C, eta JBrowse link 6 96,479,243 96,677,368 RGD:1624291
RGD:1600115
G Snai1 snail family transcriptional repressor 1 JBrowse link 3 164,274,710 164,279,199 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:1624291
slit diaphragm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 4 171,250,766 171,461,571 RGD:1624291
RGD:1600115
tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actg1 actin, gamma 1 JBrowse link 10 109,518,429 109,521,288 RGD:1624291
G Cldn11 claudin 11 JBrowse link 2 115,823,541 115,836,846 RGD:1624291
RGD:1600115
G Cldn5 claudin 5 JBrowse link 11 86,356,292 86,357,718 RGD:1600115
tricellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lsr lipolysis stimulated lipoprotein receptor JBrowse link 1 89,383,515 89,399,041 RGD:1624291
zonula adherens assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi2 abl-interactor 2 JBrowse link 9 67,234,612 67,284,504 RGD:1624291
G Dlg5 discs large MAGUK scaffold protein 5 JBrowse link 15 120,213 230,312 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19332
    cellular process 17237
      cellular component organization 6221
        cellular component assembly 2780
          cell junction assembly 230
            cell-cell junction assembly 129
              adherens junction assembly + 12
              apical junction assembly + 67
              desmosome assembly 5
              filtration diaphragm assembly + 1
              gap junction assembly + 14
              paranodal junction assembly 8
              tight junction assembly + 60
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.