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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell junction assembly
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Accession:GO:0007043 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a junction between cells.
Synonyms:exact_synonym: intercellular junction assembly
 xref: MIPS_funcat:42.06;   MIPS_funcat:42.06.04


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cell-cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arvcf armadillo repeat gene deleted in velocardiofacial syndrome JBrowse link 16 18,348,182 18,407,076 RGD:2290270
G Cdh1 cadherin 1 JBrowse link 8 106,603,350 106,670,247 RGD:2290270
G Cdh10 cadherin 10 JBrowse link 15 18,818,869 19,016,206 RGD:2290270
G Cdh11 cadherin 11 JBrowse link 8 102,632,095 102,785,493 RGD:2290270
G Cdh12 cadherin 12 JBrowse link 15 20,448,878 21,598,421 RGD:2290270
G Cdh13 cadherin 13 JBrowse link 8 118,140,017 119,324,929 RGD:2290270
G Cdh15 cadherin 15 JBrowse link 8 122,848,374 122,867,397 RGD:2290270
G Cdh17 cadherin 17 JBrowse link 4 11,758,157 11,817,905 RGD:2290270
G Cdh18 cadherin 18 JBrowse link 15 22,548,898 23,477,491 RGD:2290270
G Cdh19 cadherin 19, type 2 JBrowse link 1 110,888,002 110,977,601 RGD:2290270
G Cdh2 cadherin 2 JBrowse link 18 16,588,877 16,809,246 RGD:2290270
G Cdh23 cadherin 23 (otocadherin) JBrowse link 10 60,302,748 60,696,513 RGD:2290270
G Cdh24 cadherin-like 24 JBrowse link 14 54,631,231 54,642,067 RGD:2290270
G Cdh26 cadherin-like 26 JBrowse link 2 178,430,515 178,487,366 RGD:2290270
G Cdh3 cadherin 3 JBrowse link 8 106,510,852 106,556,911 RGD:2290270
G Cdh4 cadherin 4 JBrowse link 2 179,442,423 179,899,377 RGD:2290270
G Cdh5 cadherin 5 JBrowse link 8 104,101,613 104,144,504 RGD:2290270
G Cdh6 cadherin 6 JBrowse link 15 13,028,699 13,176,407 RGD:2290270
G Cdh7 cadherin 7, type 2 JBrowse link 1 109,982,237 110,145,272 RGD:2290270
G Cdh8 cadherin 8 JBrowse link 8 99,024,471 99,417,666 RGD:2290270
G Cdh9 cadherin 9 JBrowse link 15 16,728,550 16,857,138 RGD:2290270
G Cldn5 claudin 5 JBrowse link 16 18,776,847 18,778,262 RGD:2290270
G Ctnnd1 catenin (cadherin associated protein), delta 1 JBrowse link 2 84,587,096 84,658,977 RGD:2290270
G Ctnnd2 catenin (cadherin associated protein), delta 2 JBrowse link 15 30,172,534 31,029,344 RGD:2290270
G Flcn folliculin JBrowse link 11 59,791,408 59,810,039 RGD:2290270
G Fscn1 fascin actin-bundling protein 1 JBrowse link 5 142,960,355 142,973,189 RGD:2290270
G Hdac7 histone deacetylase 7 JBrowse link 15 97,792,661 97,844,502 RGD:2290270
G Heg1 heart development protein with EGF-like domains 1 JBrowse link 16 33,684,384 33,771,576 RGD:2290270
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 10 89,454,234 89,533,645 RGD:2290270
G Pard6b par-6 family cell polarity regulator beta JBrowse link 2 168,081,004 168,101,203 RGD:2290270
G Pkp1 plakophilin 1 JBrowse link 1 135,871,394 135,919,207 RGD:2290270
G Pkp2 plakophilin 2 JBrowse link 16 16,213,345 16,272,712 RGD:2290270
G Pkp3 plakophilin 3 JBrowse link 7 141,078,229 141,090,511 RGD:2290270
G Pkp4 plakophilin 4 JBrowse link 2 59,160,850 59,355,205 RGD:2290270
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 5 114,622,152 114,658,435 RGD:2290270
adherens junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link 3 103,739,815 103,791,894 RGD:2290270
G Jam3 junction adhesion molecule 3 JBrowse link 9 27,097,384 27,155,421 RGD:2290270
G Ramp2 receptor (calcitonin) activity modifying protein 2 JBrowse link 11 101,246,334 101,248,250 RGD:2290270
G Smad7 SMAD family member 7 JBrowse link 18 75,367,365 75,395,935 RGD:2290270
G Tbcd tubulin-specific chaperone d JBrowse link 11 121,451,991 121,617,170 RGD:2290270
G Vcl vinculin JBrowse link 14 20,929,383 21,033,676 RGD:2290270
G Zfp703 zinc finger protein 703 JBrowse link 8 26,977,336 26,981,462 RGD:2290270
apical junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn19 claudin 19 JBrowse link 4 119,255,441 119,262,438 RGD:2290270
G Ctnna1 catenin (cadherin associated protein), alpha 1 JBrowse link 18 35,118,902 35,254,776 RGD:2290270
G Fbf1 Fas (TNFRSF6) binding factor 1 JBrowse link 11 116,142,285 116,168,271 RGD:2290270
G Pkn2 protein kinase N2 JBrowse link 3 142,790,902 142,882,004 RGD:2290270
G Rhoa ras homolog family member A JBrowse link 9 108,306,160 108,337,943 RGD:2290270
G Rhoc ras homolog family member C JBrowse link 3 104,789,034 104,794,459 RGD:2290270
G Vcl vinculin JBrowse link 14 20,929,383 21,033,676 RGD:2290270
G Wdr1 WD repeat domain 1 JBrowse link 5 38,526,806 38,562,922 RGD:2290270
bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn4 actinin alpha 4 JBrowse link 7 28,893,248 28,962,351 RGD:2290270
G Afdn afadin, adherens junction formation factor JBrowse link 17 13,760,391 13,905,798 RGD:2290270
G Alox12b arachidonate 12-lipoxygenase, 12R type JBrowse link 11 69,157,072 69,169,791 RGD:2290270
G Aloxe3 arachidonate lipoxygenase 3 JBrowse link 11 69,125,417 69,149,115 RGD:2290270
G Cdh1 cadherin 1 JBrowse link 8 106,603,350 106,670,247 RGD:2290270
G Cgn cingulin JBrowse link 3 94,760,069 94,787,725 RGD:2290270
G Cldn1 claudin 1 JBrowse link 16 26,356,645 26,371,839 RGD:2290270
G Cldn3 claudin 3 JBrowse link 5 134,986,214 134,987,476 RGD:2290270
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 16 31,663,443 31,873,356 RGD:2290270
G Ect2 ect2 oncogene JBrowse link 3 27,097,222 27,154,253 RGD:2290270
G Esam endothelial cell-specific adhesion molecule JBrowse link 9 37,528,089 37,538,319 RGD:2290270
G Frmpd2 FERM and PDZ domain containing 2 JBrowse link 14 33,483,501 33,575,269 RGD:2290270
G Grhl2 grainyhead like transcription factor 2 JBrowse link 15 37,232,821 37,363,569 RGD:2290270
G Itgb1 integrin beta 1 (fibronectin receptor beta) JBrowse link 8 128,685,654 128,733,579 RGD:2290270
G Marveld2 MARVEL (membrane-associating) domain containing 2 JBrowse link 13 100,595,957 100,616,971 RGD:2290270
G Marveld3 MARVEL (membrane-associating) domain containing 3 JBrowse link 8 109,947,909 109,962,205 RGD:2290270
G Micall2 MICAL-like 2 JBrowse link 5 139,706,692 139,736,333 RGD:2290270
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:2290270
G Mpp7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) JBrowse link 18 7,347,962 7,626,889 RGD:2290270
G Ocln occludin JBrowse link 13 100,496,504 100,552,718 RGD:2290270
G Pard3 par-3 family cell polarity regulator JBrowse link 8 127,063,381 127,612,286 RGD:2290270
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 9 113,651,744 113,708,279 RGD:2290270
G Pecam1 platelet/endothelial cell adhesion molecule 1 JBrowse link 11 106,654,213 106,715,281 RGD:2290270
G Pof1b premature ovarian failure 1B JBrowse link X 112,638,427 112,698,711 RGD:2290270
G Rab13 RAB13, member RAS oncogene family JBrowse link 3 90,213,715 90,226,387 RGD:2290270
G Ramp2 receptor (calcitonin) activity modifying protein 2 JBrowse link 11 101,246,334 101,248,250 RGD:2290270
G Srf serum response factor JBrowse link 17 46,546,838 46,558,267 RGD:2290270
G Tbcd tubulin-specific chaperone d JBrowse link 11 121,451,991 121,617,170 RGD:2290270
G Wnt11 wingless-type MMTV integration site family, member 11 JBrowse link 7 98,835,084 98,854,747 RGD:2290270
desmosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jup junction plakoglobin JBrowse link 11 100,368,856 100,397,839 RGD:2290270
G Pkp2 plakophilin 2 JBrowse link 16 16,213,345 16,272,712 RGD:2290270
G Pkp3 plakophilin 3 JBrowse link 7 141,078,229 141,090,511 RGD:2290270
G Prkca protein kinase C, alpha JBrowse link 11 107,933,387 108,343,888 RGD:2290270
gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnna1 catenin (cadherin associated protein), alpha 1 JBrowse link 18 35,118,902 35,254,776 RGD:2290270
G Gja5 gap junction protein, alpha 5 JBrowse link 3 97,032,402 97,053,634 RGD:2290270
G Gjb2 gap junction protein, beta 2 JBrowse link 14 57,098,602 57,104,702 RGD:2290270
G Gjb6 gap junction protein, beta 6 JBrowse link 14 57,123,301 57,133,611 RGD:2290270
G Gjc1 gap junction protein, gamma 1 JBrowse link 11 102,799,477 102,819,686 RGD:2290270
G Gjd3 gap junction protein, delta 3 JBrowse link 11 98,979,947 98,983,020 RGD:2290270
G Pkp2 plakophilin 2 JBrowse link 16 16,213,345 16,272,712 RGD:2290270
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ikbkb inhibitor of kappaB kinase beta JBrowse link 8 22,659,205 22,706,589 RGD:2290270
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 10,064,401 10,182,251 RGD:2290270
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 12 16,894,978 16,988,274 RGD:2290270
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:2290270
negative regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 JBrowse link 11 105,967,948 105,989,964 RGD:2290270
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:2290270
paranodal junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd9 CD9 antigen JBrowse link 6 125,460,266 125,494,760 RGD:2290270
G Cntnap1 contactin associated protein-like 1 JBrowse link 11 101,174,617 101,190,724 RGD:2290270
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 JBrowse link 17 69,075,647 69,289,991 RGD:2290270
G Gnpat glyceronephosphate O-acyltransferase JBrowse link 8 124,863,033 124,890,057 RGD:2290270
G Nfasc neurofascin JBrowse link 1 132,564,690 132,741,848 RGD:2290270
G Pmp22 peripheral myelin protein 22 JBrowse link 11 63,128,982 63,159,547 RGD:2290270
G Ugt8a UDP galactosyltransferase 8A JBrowse link 3 125,865,272 125,938,682 RGD:2290270
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn1 claudin 1 JBrowse link 16 26,356,645 26,371,839 RGD:2290270
G Cldn3 claudin 3 JBrowse link 5 134,986,214 134,987,476 RGD:2290270
G Cldn5 claudin 5 JBrowse link 16 18,776,847 18,778,262 RGD:2290270
G Epha2 Eph receptor A2 JBrowse link 4 141,301,221 141,329,384 RGD:2290270
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) JBrowse link 2 127,740,732 127,788,913 RGD:2290270
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:2290270
positive regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 JBrowse link X 164,139,342 164,188,418 RGD:2290270
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:2290270
G Cav1 caveolin 1, caveolae protein JBrowse link 6 17,306,335 17,341,328 RGD:2290270
regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fzd5 frizzled class receptor 5 JBrowse link 1 64,730,558 64,737,750 RGD:2290270
G Gja1 gap junction protein, alpha 1 JBrowse link 10 56,377,300 56,390,419 RGD:2290270
G Gpbar1 G protein-coupled bile acid receptor 1 JBrowse link 1 74,278,600 74,279,589 RGD:2290270
G Myo1c myosin IC JBrowse link 11 75,650,519 75,674,643 RGD:2290270
G Nedd4l neural precursor cell expressed, developmentally down-regulated gene 4-like JBrowse link 18 64,884,480 65,217,826 RGD:2290270
G Pkp2 plakophilin 2 JBrowse link 16 16,213,345 16,272,712 RGD:2290270
G Prkaca protein kinase, cAMP dependent, catalytic, alpha JBrowse link 8 83,972,978 83,996,444 RGD:2290270
G Prkch protein kinase C, eta JBrowse link 12 73,584,796 73,778,185 RGD:2290270
G Snai1 snail family zinc finger 1 JBrowse link 2 167,538,195 167,542,814 RGD:2290270
G Snai2 snail family zinc finger 2 JBrowse link 16 14,705,852 14,709,395 RGD:2290270
slit diaphragm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 6 137,252,299 137,464,634 RGD:2290270
tricellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lsr lipolysis stimulated lipoprotein receptor JBrowse link 7 30,957,770 30,973,469 RGD:2290270
zonula adherens assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi2 abl-interactor 2 JBrowse link 1 60,405,768 60,481,945 RGD:2290270
G Dlg5 discs large MAGUK scaffold protein 5 JBrowse link 14 24,133,953 24,245,920 RGD:2290270

Term paths to the root
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Term Annotations click to browse term
  biological_process 23015
    cellular process 15767
      cellular component organization 6039
        cellular component assembly 2735
          cell junction assembly 211
            cell-cell junction assembly 115
              adherens junction assembly + 10
              apical junction assembly + 57
              desmosome assembly 4
              filtration diaphragm assembly + 1
              gap junction assembly + 12
              paranodal junction assembly 7
              tight junction assembly + 48
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.