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ONTOLOGY REPORT - ANNOTATIONS


Term:SMAD protein complex assembly
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Accession:GO:0007183 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.
Synonyms:narrow_synonym: SMAD protein heteromerization


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SMAD protein complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid2 EP300 interacting inhibitor of differentiation 2 ISO (PMID:14612439) RGD PMID:14612439 NCBI chr 1:85,515,610...85,517,516
Ensembl chr 1:85,516,653...85,517,360
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISO (PMID:16720724) RGD PMID:16720724 NCBI chr 3:147,042,944...147,062,725
Ensembl chr 3:147,042,944...147,062,724
JBrowse link
G Smad1 SMAD family member 1 ISO
IEA
(PMID:9111321)
GO_REF:0000107
RGD
Ensembl
PMID:9111321 GO_REF:0000107 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad2 SMAD family member 2 ISO (PMID:9111321) RGD PMID:9111321 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 IPI
ISO
(PMID:10823886), (PMID:9111321) RGD PMID:9111321, PMID:10823886, PMID:16959941 RGD:1599906 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad4 SMAD family member 4 ISO
IEA
(PMID:10823886)
GO_REF:0000107
RGD
Ensembl
PMID:10823886 GO_REF:0000107 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:17438144)
GO_REF:0000024
RGD
UniProt
PMID:17438144 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
negative regulation of SMAD protein complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 ISO
IBA
(PMID:24627487)
PMID:21873635
RGD PMID:24627487, PMID:21873635 RGD:13792537 NCBI chr18:63,717,423...64,045,224
Ensembl chr18:63,882,610...64,044,023
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 ISO
IBA
(PMID:20129061)
PMID:21873635
RGD PMID:20129061, PMID:21873635 RGD:13792537 NCBI chr 3:171,295,630...171,342,662
Ensembl chr 3:171,294,856...171,342,646
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent, 1A IEA
ISO
GO_REF:0000107
(PMID:16751101)
Ensembl
RGD
PMID:16751101 GO_REF:0000107 NCBI chr 6:94,433,658...94,484,979
Ensembl chr 6:94,429,068...94,484,351
JBrowse link
G Smad6 SMAD family member 6 ISO (PMID:9436979) RGD PMID:9436979 NCBI chr 8:68,897,746...68,967,221
Ensembl chr 8:68,898,296...68,966,108
JBrowse link
G Tbx20 T-box transcription factor 20 ISO (MGI:MGI:4943647|PMID:19661464) RGD PMID:19661464 MGI:MGI:4943647 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
regulation of SMAD protein complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 IMP RGD PMID:22073128 RGD:8554355 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    signaling 7588
      signal transduction 7015
        cell surface receptor signaling pathway 2782
          enzyme linked receptor protein signaling pathway 963
            transmembrane receptor protein serine/threonine kinase signaling pathway 383
              SMAD protein complex assembly 13
                negative regulation of SMAD protein complex assembly 5
                regulation of SMAD protein complex assembly + 6
Path 2
Term Annotations click to browse term
  biological_process 20014
    biological regulation 13759
      regulation of biological process 13071
        regulation of cellular process 12560
          signal transduction 7015
            cell surface receptor signaling pathway 2782
              enzyme linked receptor protein signaling pathway 963
                transmembrane receptor protein serine/threonine kinase signaling pathway 383
                  SMAD protein complex assembly 13
                    negative regulation of SMAD protein complex assembly 5
                    regulation of SMAD protein complex assembly + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.