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ONTOLOGY REPORT - ANNOTATIONS


Term:germ cell development
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Accession:GO:0007281 term browser browse the term
Definition:The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
Synonyms:narrow_synonym: primordial germ cell development


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germ cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR1 activin A receptor type 1 JBrowse link 2B 44,994,175 45,133,490 RGD:9068941
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 85,417,229 85,444,722 RGD:9068941
G ANGPT2 angiopoietin 2 JBrowse link 8 718,367 782,534 RGD:9068941
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 45,955,926 45,962,870 RGD:9068941
G BCL2L1 BCL2 like 1 JBrowse link 20 27,955,688 28,015,950 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 34,542,132 34,549,286 RGD:9068941
G BMP8A bone morphogenetic protein 8a JBrowse link 1 38,776,557 38,815,210 RGD:9068941
G CXCL12 C-X-C motif chemokine ligand 12 JBrowse link 10 41,296,975 41,384,864 RGD:9068941
G CXCR4 C-X-C motif chemokine receptor 4 JBrowse link 2B 23,744,271 23,748,106 RGD:9068941
G DAZL deleted in azoospermia like JBrowse link 3 16,514,327 16,625,601 RGD:9068941
G DND1 DND microRNA-mediated repression inhibitor 1 JBrowse link 5 136,035,464 136,038,524 RGD:9068941
G DZIP1 DAZ interacting zinc finger protein 1 JBrowse link 13 76,757,062 76,820,627 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,542,946 31,560,894 RGD:9068941
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G FANCC FA complementation group C JBrowse link 9 66,201,581 66,418,229 RGD:9068941
G LIN28A lin-28 homolog A JBrowse link 1 25,674,751 25,693,684 RGD:9068941
G MAP7 microtubule associated protein 7 JBrowse link 6 134,102,927 134,312,296 RGD:9068941
G MOV10L1 Mov10 like RISC complex RNA helicase 1 JBrowse link 22 30,320,202 30,391,121 RGD:9068941
G MSH2 mutS homolog 2 JBrowse link 2A 47,524,468 47,602,376 RGD:9068941
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 9,871,700 10,028,704 RGD:9068941
G NANOS3 nanos C2HC-type zinc finger 3 JBrowse link 19 13,427,661 13,443,218 RGD:9068941
G PRDM1 PR/SET domain 1 JBrowse link 6 103,899,410 103,923,389 RGD:9068941
G PRDM14 PR/SET domain 14 JBrowse link 8 66,578,674 66,599,360 RGD:9068941
G PRSS42P serine protease 42, pseudogene JBrowse link 3 46,722,760 46,748,285 RGD:9068941
G RARA retinoic acid receptor alpha JBrowse link 17 16,932,485 16,980,958 RGD:9068941
G RNF2 ring finger protein 2 JBrowse link 1 160,568,438 160,626,783 RGD:9068941
G RPS6KB1 ribosomal protein S6 kinase B1 JBrowse link 17 53,958,807 54,014,752 RGD:9068941
G SMAD5 SMAD family member 5 JBrowse link 5 131,524,229 131,574,119 RGD:9068941
G TDRD1 tudor domain containing 1 JBrowse link 10 110,778,772 110,832,545 RGD:9068941
G TDRD6 tudor domain containing 6 JBrowse link 6 46,265,074 46,287,015 RGD:9068941
G TDRD7 tudor domain containing 7 JBrowse link 9 68,502,761 68,586,633 RGD:9068941
G TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 JBrowse link 10 116,142,127 116,165,631 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,349,807 32,398,494 RGD:9068941
G ZFX zinc finger protein X-linked JBrowse link X 16,745,872 16,813,486 RGD:9068941
acrosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACRBP acrosin binding protein JBrowse link 12 6,768,971 6,778,613 RGD:9068941
G AGFG1 ArfGAP with FG repeats 1 JBrowse link 2B 114,711,697 114,800,680 RGD:9068941
G CCDC136 coiled-coil domain containing 136 JBrowse link 7 120,743,177 120,774,401 RGD:9068941
G CHN2 chimerin 2 JBrowse link 7 29,840,194 30,157,363 RGD:9068941
G FABP9 fatty acid binding protein 9 JBrowse link 8 77,981,007 77,984,333 RGD:9068941
G KIAA0319L KIAA0319 like JBrowse link 1 34,701,571 34,825,628 RGD:9068941
G MFSD14A major facilitator superfamily domain containing 14A JBrowse link 1 102,696,558 102,741,630 RGD:9068941
G NECTIN2 nectin cell adhesion molecule 2 JBrowse link 19 41,794,037 41,837,047 RGD:9068941
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 JBrowse link 17 2,584,349 2,676,928 RGD:9068941
G PLA2G3 phospholipase A2 group III JBrowse link 22 12,158,589 12,164,441 RGD:9068941
G RFX2 regulatory factor X2 JBrowse link 19 5,013,823 5,132,451 RGD:9068941
G SEC23IP SEC23 interacting protein JBrowse link 10 116,460,187 116,510,830 RGD:9068941
G SPACA1 sperm acrosome associated 1 JBrowse link 6 85,925,861 85,944,492 RGD:9068941
G SPINK2 serine peptidase inhibitor Kazal type 2 JBrowse link 4 67,101,686 67,113,671 RGD:9068941
G TBC1D20 TBC1 domain family member 20 JBrowse link 20 644,646 670,860 RGD:9068941
G TBPL1 TATA-box binding protein like 1 JBrowse link 6 131,719,606 131,754,960 RGD:9068941
G TMF1 TATA element modulatory factor 1 JBrowse link 3 68,955,866 68,988,353 RGD:9068941
G TXNDC8 thioredoxin domain containing 8 JBrowse link 9 81,458,398 81,492,855 RGD:9068941
G ZPBP zona pellucida binding protein JBrowse link 7 50,576,485 50,735,411 RGD:9068941
G ZPBP2 zona pellucida binding protein 2 JBrowse link 17 17,410,278 17,420,458 RGD:9068941
egg coat formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZP3 zona pellucida glycoprotein 3 JBrowse link 7 67,574,932 67,592,757 RGD:9068941
intramanchette transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP131 centrosomal protein 131 JBrowse link 17 75,614,593 75,648,730 RGD:9068941
male germ-line stem cell asymmetric division term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ETV5 ETS variant transcription factor 5 JBrowse link 3 183,076,677 183,139,886 RGD:9068941
G ING2 inhibitor of growth family member 2 JBrowse link 4 175,683,040 175,689,646 RGD:9068941
G STRA8 stimulated by retinoic acid 8 JBrowse link 7 127,205,332 127,223,825 RGD:9068941
G ZBTB16 zinc finger and BTB domain containing 16 JBrowse link 11 108,938,414 109,133,819 RGD:9068941
mammalian oogenesis stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RPS6 ribosomal protein S6 JBrowse link 9 19,185,455 19,189,504 RGD:9068941
manchette assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP131 centrosomal protein 131 JBrowse link 17 75,614,593 75,648,730 RGD:9068941
G HOOK1 hook microtubule tethering protein 1 JBrowse link 1 59,072,565 59,134,191 RGD:9068941
G TTC26 tetratricopeptide repeat domain 26 JBrowse link 7 131,092,241 131,150,109 RGD:9068941
manchette disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RSPH6A radial spoke head 6 homolog A JBrowse link 19 42,805,151 42,824,725 RGD:9068941
meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDK1 cyclin dependent kinase 1 JBrowse link 10 57,314,692 57,331,261 RGD:9068941
G KIF20A kinesin family member 20A JBrowse link 5 133,557,456 133,566,089 RGD:9068941
negative regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCNB1 cyclin B1 JBrowse link 5 44,826,103 44,836,832 RGD:9068941
G CCNB2 cyclin B2 JBrowse link 15 38,075,106 38,095,699 RGD:9068941
G FZR1 fizzy and cell division cycle 20 related 1 JBrowse link 19 2,533,172 2,564,301 RGD:9068941
G GPR3 G protein-coupled receptor 3 JBrowse link 1 26,654,198 26,657,421 RGD:9068941
G GRB14 growth factor receptor bound protein 14 JBrowse link 2B 51,773,844 51,902,420 RGD:9068941
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 13,657,344 13,683,864 RGD:9068941
negative regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IGF1 insulin like growth factor 1 JBrowse link 12 99,986,887 100,066,773 RGD:9068941
negative regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GPR3 G protein-coupled receptor 3 JBrowse link 1 26,654,198 26,657,421 RGD:9068941
G NPPC natriuretic peptide C JBrowse link 2B 119,148,774 119,153,381 RGD:9068941
G NPR2 natriuretic peptide receptor 2 JBrowse link 9 35,642,534 35,660,210 RGD:9068941
G SHB SH2 domain containing adaptor protein B JBrowse link 9 37,768,566 37,921,897 RGD:9068941
G WEE2 WEE2 oocyte meiosis inhibiting kinase JBrowse link 7 133,635,359 133,663,153 RGD:9068941
negative regulation of sperm capacitation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PAEP progestagen associated endometrial protein JBrowse link 9 106,669,550 106,681,918 RGD:9068941
oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 56,481,212 56,679,012 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,104,940 41,145,934 RGD:9068941
G DMRT1 doublesex and mab-3 related transcription factor 1 JBrowse link 9 650,678 778,519 RGD:9068941
G EZHIP EZH inhibitory protein JBrowse link X 43,583,952 43,585,933 RGD:9068941
G INHBB inhibin subunit beta B JBrowse link 2B 7,278,944 7,284,632 RGD:9068941
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 12,725,114 12,744,974 RGD:9068941
G WNT4 Wnt family member 4 JBrowse link 1 21,310,228 21,335,985 RGD:9068941
G YBX2 Y-box binding protein 2 JBrowse link 17 7,319,186 7,325,594 RGD:9068941
G YTHDC2 YTH domain containing 2 JBrowse link 5 108,870,417 108,951,848 RGD:9068941
G ZFX zinc finger protein X-linked JBrowse link X 16,745,872 16,813,486 RGD:9068941
G ZGLP1 zinc finger GATA like protein 1 JBrowse link 19 9,855,211 9,860,326 RGD:9068941
G ZP3 zona pellucida glycoprotein 3 JBrowse link 7 67,574,932 67,592,757 RGD:9068941
oocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KMT2B lysine methyltransferase 2B JBrowse link 19 32,647,815 32,668,656 RGD:9068941
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 JBrowse link 12 68,963,423 69,110,107 RGD:9068941
G NPM2 nucleophosmin/nucleoplasmin 2 JBrowse link 8 21,268,873 21,281,684 RGD:9068941
G SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link 9 106,765,101 106,786,836 RGD:9068941
G SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 JBrowse link 13 17,379,900 17,426,758 RGD:9068941
oocyte growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GDF9 growth differentiation factor 9 JBrowse link 5 128,278,496 128,284,003 RGD:9068941
G KMT2D lysine methyltransferase 2D JBrowse link 12 39,689,463 39,731,904 RGD:9068941
oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 13,574,422 13,658,967 RGD:9068941
G CCNB1 cyclin B1 JBrowse link 5 44,826,103 44,836,832 RGD:9068941
G CDC25B cell division cycle 25B JBrowse link 20 3,877,255 3,883,458 RGD:9068941
G DAZL deleted in azoospermia like JBrowse link 3 16,514,327 16,625,601 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 19,433,989 19,485,804 RGD:9068941
G EREG epiregulin JBrowse link 4 49,806,505 49,827,961 RGD:9068941
G FBXO5 F-box protein 5 JBrowse link 6 150,793,020 150,806,008 RGD:9068941
G FOXO3 forkhead box O3 JBrowse link 6 106,360,519 106,485,676 RGD:9068941
G PABPC1L poly(A) binding protein cytoplasmic 1 like JBrowse link 20 41,240,430 41,270,036 RGD:9068941
G PDE3A phosphodiesterase 3A JBrowse link 12 20,380,213 20,690,540 RGD:9068941
G PTK2B protein tyrosine kinase 2 beta JBrowse link 8 26,580,855 26,729,378 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 4,948,100 4,956,492 RGD:9068941
G RPS6KA2 ribosomal protein S6 kinase A2 JBrowse link 6 164,373,829 164,829,195 RGD:9068941
G RXFP2 relaxin family peptide receptor 2 JBrowse link 13 12,998,696 13,062,548 RGD:9068941
G TUBB8 tubulin beta 8 class VIII JBrowse link 10 56,937 61,125 RGD:9068941
G TUT4 terminal uridylyl transferase 4 JBrowse link 1 51,684,408 51,815,059 RGD:9068941
G TUT7 terminal uridylyl transferase 7 JBrowse link 9 57,433,583 57,498,675 RGD:9068941
G WASHC5 WASH complex subunit 5 JBrowse link 8 121,710,118 121,777,977 RGD:9068941
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 1 28,007,592 28,041,179 RGD:9068941
oogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADRM1 adhesion regulating molecule 1 JBrowse link 20 58,667,601 58,673,566 RGD:9068941
G ASPM assembly factor for spindle microtubules JBrowse link 1 172,674,890 172,737,426 RGD:9068941
G C14H14orf39 chromosome 14 C14orf39 homolog JBrowse link 14 41,040,315 41,090,267 RGD:9068941
G DDX20 DEAD-box helicase 20 JBrowse link 1 114,402,492 114,432,217 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 19,433,989 19,485,804 RGD:9068941
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G FMN2 formin 2 JBrowse link 1 215,626,889 216,023,590 RGD:9068941
G HEXB hexosaminidase subunit beta JBrowse link 5 40,589,448 40,625,176 RGD:9068941
G HORMAD1 HORMA domain containing 1 JBrowse link 1 126,054,585 126,077,361 RGD:9068941
G IHO1 interactor of HORMAD1 1 JBrowse link 3 49,122,120 49,181,228 RGD:9068941
G KASH5 KASH domain containing 5 JBrowse link 19 46,402,586 46,432,002 RGD:9068941
G KMT2D lysine methyltransferase 2D JBrowse link 12 39,689,463 39,731,904 RGD:9068941
G LOC100970414 histone H3.3A JBrowse link 1 201,523,670 201,533,005 RGD:9068941
G LOC100988671 histone H3.3A JBrowse link 17 69,728,165 69,730,519 RGD:9068941
G MARF1 meiosis regulator and mRNA stability factor 1 RGD:9068941
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 63,412,462 63,465,258 RGD:9068941
G MDK midkine JBrowse link 11 46,339,365 46,342,388 RGD:9068941
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 22 22,592,508 22,692,370 RGD:9068941
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 6 75,500,343 75,769,319 RGD:9068941
G MLH1 mutL homolog 1 JBrowse link 3 36,899,828 36,957,076 RGD:9068941
G NANOS3 nanos C2HC-type zinc finger 3 JBrowse link 19 13,427,661 13,443,218 RGD:9068941
G PIWIL2 piwi like RNA-mediated gene silencing 2 JBrowse link 8 21,520,166 21,608,374 RGD:9068941
G PTN pleiotrophin JBrowse link 7 129,184,786 129,300,815 RGD:9068941
G SEBOX SEBOX homeobox JBrowse link 17 28,408,417 28,410,456 RGD:9068941
G SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link 9 106,765,101 106,786,836 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 53,669,128 53,684,328 RGD:9068941
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 33,667,614 33,727,126 RGD:9068941
G YBX2 Y-box binding protein 2 JBrowse link 17 7,319,186 7,325,594 RGD:9068941
ovarian cumulus expansion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMPR1B bone morphogenetic protein receptor type 1B JBrowse link 4 87,125,911 87,523,084 RGD:9068941
G EREG epiregulin JBrowse link 4 49,806,505 49,827,961 RGD:9068941
G GDF9 growth differentiation factor 9 JBrowse link 5 128,278,496 128,284,003 RGD:9068941
G KIF20A kinesin family member 20A JBrowse link 5 133,557,456 133,566,089 RGD:9068941
G PTX3 pentraxin 3 JBrowse link 3 154,485,470 154,492,293 RGD:9068941
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PLD6 phospholipase D family member 6 JBrowse link 17 34,084,634 34,091,470 RGD:9068941
G TDRD5 tudor domain containing 5 JBrowse link 1 155,080,083 155,171,734 RGD:9068941
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCR6 C-C motif chemokine receptor 6 JBrowse link 6 165,094,563 165,109,774 RGD:9068941
G DEFB1 defensin beta 1 JBrowse link 8 403,268 410,712 RGD:9068941
G IQCF1 IQ motif containing F1 JBrowse link 3 51,836,683 51,847,503 RGD:9068941
G RNASE9 ribonuclease A family member 9 (inactive) JBrowse link 14 1,421,047 1,425,872 RGD:9068941
positive regulation of male germ-line stem cell asymmetric division term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HOXC4 homeobox C4 JBrowse link 12 34,699,357 34,702,368 RGD:9068941
positive regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AURKA aurora kinase A JBrowse link 20 52,707,757 52,730,579 RGD:9068941
G CCNH cyclin H JBrowse link 5 27,958,859 27,995,815 RGD:9068941
G CDC20 cell division cycle 20 JBrowse link 1 42,660,338 42,664,618 RGD:9068941
G CDK1 cyclin dependent kinase 1 JBrowse link 10 57,314,692 57,331,261 RGD:9068941
G CDK2 cyclin dependent kinase 2 JBrowse link 12 32,940,225 32,946,236 RGD:9068941
G CDK7 cyclin dependent kinase 7 JBrowse link 5 44,723,268 44,765,711 RGD:9068941
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 15 62,949,264 63,053,994 RGD:9068941
G MASTL microtubule associated serine/threonine kinase like JBrowse link 10 27,264,475 27,296,085 RGD:9068941
G PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 3 48,665,421 48,774,111 RGD:9068941
positive regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDE3A phosphodiesterase 3A JBrowse link 12 20,380,213 20,690,540 RGD:9068941
G PDE5A phosphodiesterase 5A JBrowse link 4 111,682,772 111,817,234 RGD:9068941
positive regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AURKA aurora kinase A JBrowse link 20 52,707,757 52,730,579 RGD:9068941
G BNC1 basonuclin 1 JBrowse link 15 62,316,229 62,345,123 RGD:9068941
G GDF9 growth differentiation factor 9 JBrowse link 5 128,278,496 128,284,003 RGD:9068941
G SIRT2 sirtuin 2 JBrowse link 19 35,984,453 36,005,582 RGD:9068941
preantral ovarian follicle growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMH anti-Mullerian hormone JBrowse link 19 1,260,219 1,263,395 RGD:9068941
G GPR149 G protein-coupled receptor 149 JBrowse link 3 151,393,049 151,493,824 RGD:9068941
G ZNF830 zinc finger protein 830 JBrowse link 17 21,823,998 21,825,632 RGD:9068941
primary follicle stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EREG epiregulin JBrowse link 4 49,806,505 49,827,961 RGD:9068941
proacrosomal vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIAA0319L KIAA0319 like JBrowse link 1 34,701,571 34,825,628 RGD:9068941
G SOX30 SRY-box transcription factor 30 JBrowse link 5 153,022,109 153,067,734 RGD:9068941
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP5 A-kinase anchoring protein 5 JBrowse link 14 45,045,476 45,050,946 RGD:9068941
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 49,133,295 49,169,447 RGD:9068941
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 17 62,448,718 62,488,493 RGD:9068941
G PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 3 48,665,421 48,774,111 RGD:9068941
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 1 28,007,592 28,041,179 RGD:9068941
regulation of sperm capacitation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TCP11 t-complex 11 JBrowse link 6 34,680,570 34,703,230 RGD:9068941
sperm axoneme assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARMC2 armadillo repeat containing 2 JBrowse link 6 106,650,907 106,777,544 RGD:9068941
G BBS2 Bardet-Biedl syndrome 2 JBrowse link 16 36,756,699 36,807,652 RGD:9068941
G CEP131 centrosomal protein 131 JBrowse link 17 75,614,593 75,648,730 RGD:9068941
G CFAP157 cilia and flagella associated protein 157 JBrowse link 9 98,825,719 98,834,780 RGD:9068941
G CFAP43 cilia and flagella associated protein 43 JBrowse link 10 100,729,982 100,831,694 RGD:9068941
G CFAP44 cilia and flagella associated protein 44 JBrowse link 3 110,432,619 110,587,517 RGD:9068941
G CFAP65 cilia and flagella associated protein 65 JBrowse link 2B 106,260,872 106,299,594 RGD:9068941
G CFAP69 cilia and flagella associated protein 69 JBrowse link 7 82,254,266 82,353,873 RGD:9068941
G DNAH1 dynein axonemal heavy chain 1 JBrowse link 3 52,233,271 52,342,627 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 2B 73,019,091 73,112,974 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 1,893,102 2,017,771 RGD:9068941
G IQCG IQ motif containing G JBrowse link 3 195,316,220 195,396,328 RGD:9068941
G NEURL1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 10 100,093,614 100,192,485 RGD:9068941
G PLA2G3 phospholipase A2 group III JBrowse link 22 12,158,589 12,164,441 RGD:9068941
G SPAG16 sperm associated antigen 16 JBrowse link 2B 100,539,441 101,666,204 RGD:9068941
G SPEF2 sperm flagellar 2 JBrowse link 5 74,554,017 74,751,921 RGD:9068941
G TPGS1 tubulin polyglutamylase complex subunit 1 JBrowse link 19 614,279 625,715 RGD:9068941
G TTLL1 tubulin tyrosine ligase like 1 JBrowse link 22 23,924,628 23,973,282 RGD:9068941
G TTLL5 tubulin tyrosine ligase like 5 JBrowse link 14 56,216,214 56,513,718 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
sperm capacitation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link 15 67,780,453 67,891,454 RGD:9068941
G BSPH1 binder of sperm protein homolog 1 JBrowse link 19 44,907,826 44,933,116 RGD:9068941
G CATSPER3 cation channel sperm associated 3 JBrowse link 5 130,362,139 130,406,888 RGD:9068941
G CATSPER4 cation channel sperm associated 4 JBrowse link 1 25,451,655 25,464,069 RGD:9068941
G CATSPERD cation channel sperm associated auxiliary subunit delta JBrowse link 19 4,736,106 4,792,440 RGD:9068941
G CATSPERZ catsper channel auxiliary subunit zeta JBrowse link 11 59,657,237 59,661,838 RGD:9068941
G CFTR CF transmembrane conductance regulator JBrowse link 7 109,449,847 109,633,023 RGD:9068941
G DLD dihydrolipoamide dehydrogenase JBrowse link 7 99,872,020 99,901,884 RGD:9068941
G EFCAB9 EF-hand calcium binding domain 9 JBrowse link 5 167,545,205 167,554,563 RGD:9068941
G LOC100986165 semenogelin 2 JBrowse link 20 41,552,614 41,554,605 RGD:9068941
G PEBP1 phosphatidylethanolamine binding protein 1 JBrowse link 12 115,716,953 115,726,412 RGD:9068941
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 13,657,344 13,683,864 RGD:9068941
G ROPN1 rhophilin associated tail protein 1 JBrowse link 3 121,074,182 121,097,320 RGD:9068941
G ROPN1L rhophilin associated tail protein 1 like JBrowse link 5 10,757,032 10,795,787 RGD:9068941
G SEPTIN4 septin 4 JBrowse link 17 52,595,185 52,607,020 RGD:9068941
G SLC26A3 solute carrier family 26 member 3 JBrowse link 7 99,747,405 99,776,763 RGD:9068941
G SLC26A6 solute carrier family 26 member 6 JBrowse link 3 48,547,277 48,557,099 RGD:9068941
G SPINK1 serine peptidase inhibitor Kazal type 1 JBrowse link 5 143,273,137 143,287,745 RGD:9068941
sperm chromatin condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FSHR follicle stimulating hormone receptor JBrowse link 2A 49,088,450 49,287,688 RGD:9068941
G LOC100987154 testis-specific H1 histone JBrowse link 12 40,402,590 40,406,005 RGD:9068941
G SELENOF selenoprotein F JBrowse link 1 119,382,707 119,432,277 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 87,565,888 87,701,530 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
G TSSK6 testis specific serine kinase 6 JBrowse link 19 18,952,643 18,954,101 RGD:9068941
sperm individualization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SPEM1 spermatid maturation 1 JBrowse link 17 7,454,453 7,455,791 RGD:9068941
spermatid development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACRBP acrosin binding protein JBrowse link 12 6,768,971 6,778,613 RGD:9068941
G ADAD1 adenosine deaminase domain containing 1 JBrowse link 4 114,574,953 114,625,948 RGD:9068941
G ADRM1 adhesion regulating molecule 1 JBrowse link 20 58,667,601 58,673,566 RGD:9068941
G AFF4 AF4/FMR2 family member 4 JBrowse link 5 128,292,700 128,374,511 RGD:9068941
G ALMS1 ALMS1 centrosome and basal body associated protein JBrowse link 2A 73,438,657 73,671,313 RGD:9068941
G BBS4 Bardet-Biedl syndrome 4 JBrowse link 15 51,601,526 51,656,460 RGD:9068941
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 55,786,568 55,973,366 RGD:9068941
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 JBrowse link 12 18,733,149 18,734,224 RGD:9068941
G CCDC42 coiled-coil domain containing 42 JBrowse link 17 42,908,881 42,924,815 RGD:9068941
G CCDC63 coiled-coil domain containing 63 JBrowse link 12 108,417,758 108,477,163 RGD:9068941
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 14 1,182,025 1,205,471 RGD:9068941
G CDYL chromodomain Y like JBrowse link 6 4,607,088 4,790,742 RGD:9068941
G CELF1 CUGBP Elav-like family member 1 JBrowse link 11 47,415,600 47,515,254 RGD:9068941
G CEP131 centrosomal protein 131 JBrowse link 17 75,614,593 75,648,730 RGD:9068941
G CEP57 centrosomal protein 57 JBrowse link 11 90,795,277 90,838,166 RGD:9068941
G CIB1 calcium and integrin binding 1 JBrowse link 15 68,919,377 68,923,213 RGD:9068941
G DDIAS DNA damage induced apoptosis suppressor JBrowse link 11 77,967,057 77,999,829 RGD:9068941
G DDX25 DEAD-box helicase 25 JBrowse link 11 120,718,758 120,738,527 RGD:9068941
G DHH desert hedgehog signaling molecule JBrowse link 12 39,656,046 39,661,439 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 19,433,989 19,485,804 RGD:9068941
G DPY19L2 dpy-19 like 2 JBrowse link 12 25,275,612 25,379,087 RGD:9068941
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 JBrowse link 14 82,584,876 82,670,750 RGD:9068941
G DYNLL1 dynein light chain LC8-type 1 JBrowse link 12 118,078,401 118,080,822 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,542,946 31,560,894 RGD:9068941
G FANCG FA complementation group G JBrowse link 9 34,924,399 34,931,077 RGD:9068941
G FNDC3A fibronectin type III domain containing 3A JBrowse link 13 30,119,740 30,347,544 RGD:9068941
G FSHR follicle stimulating hormone receptor JBrowse link 2A 49,088,450 49,287,688 RGD:9068941
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 JBrowse link 7 143,546,728 143,599,258 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 19 32,479,559 32,491,959 RGD:9068941
G HOOK1 hook microtubule tethering protein 1 JBrowse link 1 59,072,565 59,134,191 RGD:9068941
G HSPA2 heat shock protein family A (Hsp70) member 2 JBrowse link 14 45,124,326 45,127,105 RGD:9068941
G ICA1L islet cell autoantigen 1 like JBrowse link 2B 90,034,205 90,105,600 RGD:9068941
G ING2 inhibitor of growth family member 2 JBrowse link 4 175,683,040 175,689,646 RGD:9068941
G INSL6 insulin like 6 JBrowse link 9 5,007,158 5,029,056 RGD:9068941
G IQCG IQ motif containing G JBrowse link 3 195,316,220 195,396,328 RGD:9068941
G JAM2 junctional adhesion molecule 2 JBrowse link 21 12,084,083 12,162,615 RGD:9068941
G JAM3 junctional adhesion molecule 3 JBrowse link 11 128,916,024 129,006,497 RGD:9068941
G KIT KIT proto-oncogene, receptor tyrosine kinase JBrowse link 4 69,199,543 69,282,323 RGD:9068941
G KLHL10 kelch like family member 10 JBrowse link 17 15,465,507 15,478,190 RGD:9068941
G LOC100988671 histone H3.3A JBrowse link 17 69,728,165 69,730,519 RGD:9068941
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 22 22,592,508 22,692,370 RGD:9068941
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 12,725,114 12,744,974 RGD:9068941
G MFSD14A major facilitator superfamily domain containing 14A JBrowse link 1 102,696,558 102,741,630 RGD:9068941
G MKKS McKusick-Kaufman syndrome JBrowse link 20 10,346,252 10,380,180 RGD:9068941
G NECTIN2 nectin cell adhesion molecule 2 JBrowse link 19 41,794,037 41,837,047 RGD:9068941
G NME5 NME/NM23 family member 5 JBrowse link 5 133,493,930 133,517,906 RGD:9068941
G NSUN2 NOP2/Sun RNA methyltransferase 2 JBrowse link 5 6,921,073 6,953,622 RGD:9068941
G NUP210L nucleoporin 210 like JBrowse link 1 129,349,468 129,510,688 RGD:9068941
G OCA2 OCA2 melanosomal transmembrane protein JBrowse link 15 1,811,728 2,192,018 RGD:9068941
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 9 99,577,891 99,623,581 RGD:9068941
G OSBP2 oxysterol binding protein 2 JBrowse link 22 11,719,017 11,933,841 RGD:9068941
G PACRG parkin coregulated JBrowse link 6 160,677,517 161,261,350 RGD:9068941
G PANK2 pantothenate kinase 2 JBrowse link 20 3,924,054 3,959,393 RGD:9068941
G PDILT protein disulfide isomerase like, testis expressed JBrowse link 16 17,908,332 17,953,992 RGD:9068941
G PEBP1 phosphatidylethanolamine binding protein 1 JBrowse link 12 115,716,953 115,726,412 RGD:9068941
G PITHD1 PITH domain containing 1 JBrowse link 1 22,970,081 22,979,841 RGD:9068941
G PIWIL1 piwi like RNA-mediated gene silencing 1 JBrowse link 12 127,951,178 127,986,173 RGD:9068941
G PLD6 phospholipase D family member 6 JBrowse link 17 34,084,634 34,091,470 RGD:9068941
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta JBrowse link 5 142,037,831 142,521,655 RGD:9068941
G PRKG1 protein kinase cGMP-dependent 1 JBrowse link 10 47,642,312 48,935,188 RGD:9068941
G PRM1 protamine 1 JBrowse link 16 10,222,779 10,223,289 RGD:9068941
G PRM2 protamine 2 JBrowse link 16 10,217,586 10,218,446 RGD:9068941
G PYGO1 pygopus family PHD finger 1 JBrowse link 15 34,509,787 34,556,686 RGD:9068941
G PYGO2 pygopus family PHD finger 2 JBrowse link 1 130,305,547 130,310,270 RGD:9068941
G QKI QKI, KH domain containing RNA binding JBrowse link 6 161,361,413 161,523,414 RGD:9068941
G RAN RAN, member RAS oncogene family JBrowse link 12 128,497,407 128,503,049 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 4,948,100 4,956,492 RGD:9068941
G RFX2 regulatory factor X2 JBrowse link 19 5,013,823 5,132,451 RGD:9068941
G RIMBP3C RIMS binding protein 3C JBrowse link 22 3,668,133 3,673,619 RGD:9068941
G RNF17 ring finger protein 17 JBrowse link 13 6,056,496 6,172,231 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 21 28,779,994 28,804,130 RGD:9068941
G SEC23IP SEC23 interacting protein JBrowse link 10 116,460,187 116,510,830 RGD:9068941
G SEPTIN4 septin 4 JBrowse link 17 52,595,185 52,607,020 RGD:9068941
G SIX5 SIX homeobox 5 JBrowse link 19 42,774,240 42,779,026 RGD:9068941
G SLIRP SRA stem-loop interacting RNA binding protein JBrowse link 14 58,262,126 58,271,829 RGD:9068941
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 9 1,818,004 1,997,652 RGD:9068941
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 19 10,515,216 10,616,155 RGD:9068941
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 17 16,633,982 16,660,502 RGD:9068941
G SOX30 SRY-box transcription factor 30 JBrowse link 5 153,022,109 153,067,734 RGD:9068941
G SPINK2 serine peptidase inhibitor Kazal type 2 JBrowse link 4 67,101,686 67,113,671 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 53,669,128 53,684,328 RGD:9068941
G STK11 serine/threonine kinase 11 RGD:9068941
G STRBP spermatid perinuclear RNA binding protein JBrowse link 9 94,249,017 94,395,796 RGD:9068941
G SUN5 Sad1 and UNC84 domain containing 5 JBrowse link 20 29,269,845 29,290,474 RGD:9068941
G TAF7L TATA-box binding protein associated factor 7 like JBrowse link X 90,471,354 90,496,618 RGD:9068941
G TARBP2 TARBP2 subunit of RISC loading complex JBrowse link 12 35,246,937 35,253,378 RGD:9068941
G TDRD5 tudor domain containing 5 JBrowse link 1 155,080,083 155,171,734 RGD:9068941
G TMF1 TATA element modulatory factor 1 JBrowse link 3 68,955,866 68,988,353 RGD:9068941
G TNK2 tyrosine kinase non receptor 2 JBrowse link 3 193,254,017 193,302,863 RGD:9068941
G TNP1 transition protein 1 JBrowse link 2B 104,122,748 104,123,349 RGD:9068941
G TOPAZ1 testis and ovary specific PAZ domain containing 1 JBrowse link 3 44,131,729 44,221,846 RGD:9068941
G TSSK1B testis specific serine kinase 1B JBrowse link 5 108,790,115 108,794,426 RGD:9068941
G TSSK2 testis specific serine kinase 2 JBrowse link 22 1,885,099 1,887,139 RGD:9068941
G TSSK4 testis specific serine kinase 4 JBrowse link 14 4,980,178 4,984,291 RGD:9068941
G TTC21A tetratricopeptide repeat domain 21A JBrowse link 3 39,003,730 39,035,183 RGD:9068941
G TTC26 tetratricopeptide repeat domain 26 JBrowse link 7 131,092,241 131,150,109 RGD:9068941
G UBE2J1 ubiquitin conjugating enzyme E2 J1 JBrowse link 6 87,196,938 87,223,414 RGD:9068941
G YBX2 Y-box binding protein 2 JBrowse link 17 7,319,186 7,325,594 RGD:9068941
G YTHDC2 YTH domain containing 2 JBrowse link 5 108,870,417 108,951,848 RGD:9068941
G ZFP42 ZFP42 zinc finger protein JBrowse link 4 180,152,673 180,162,899 RGD:9068941
G ZMYND15 zinc finger MYND-type containing 15 JBrowse link 17 4,795,541 4,801,947 RGD:9068941
spermatid nucleus differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGFG1 ArfGAP with FG repeats 1 JBrowse link 2B 114,711,697 114,800,680 RGD:9068941
G GOPC golgi associated PDZ and coiled-coil motif containing JBrowse link 6 115,368,682 115,411,140 RGD:9068941
G HMGB2 high mobility group box 2 JBrowse link 4 165,559,848 165,562,625 RGD:9068941
G MFSD14A major facilitator superfamily domain containing 14A JBrowse link 1 102,696,558 102,741,630 RGD:9068941
G NECTIN2 nectin cell adhesion molecule 2 JBrowse link 19 41,794,037 41,837,047 RGD:9068941
G PYGO1 pygopus family PHD finger 1 JBrowse link 15 34,509,787 34,556,686 RGD:9068941
G PYGO2 pygopus family PHD finger 2 JBrowse link 1 130,305,547 130,310,270 RGD:9068941
G TBPL1 TATA-box binding protein like 1 JBrowse link 6 131,719,606 131,754,960 RGD:9068941
G TMF1 TATA element modulatory factor 1 JBrowse link 3 68,955,866 68,988,353 RGD:9068941
spermatid nucleus elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DMRTC2 DMRT like family C2 JBrowse link 19 38,735,791 38,741,017 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 1,893,102 2,017,771 RGD:9068941
G KDM3A lysine demethylase 3A JBrowse link 2A 86,497,531 86,548,772 RGD:9068941
G LOC100987154 testis-specific H1 histone JBrowse link 12 40,402,590 40,406,005 RGD:9068941
G TNP1 transition protein 1 JBrowse link 2B 104,122,748 104,123,349 RGD:9068941
spermatogenesis, exchange of chromosomal proteins term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHD5 chromodomain helicase DNA binding protein 5 JBrowse link 1 4,867,636 4,947,401 RGD:9068941
G FSHR follicle stimulating hormone receptor JBrowse link 2A 49,088,450 49,287,688 RGD:9068941
G LOC100979289 histone H2B type 1-A JBrowse link 6 25,561,518 25,562,817 RGD:9068941
G PIWIL1 piwi like RNA-mediated gene silencing 1 JBrowse link 12 127,951,178 127,986,173 RGD:9068941
G PSME4 proteasome activator subunit 4 JBrowse link 2A 54,007,224 54,113,557 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
G TNP1 transition protein 1 JBrowse link 2B 104,122,748 104,123,349 RGD:9068941
G TNP2 transition protein 2 JBrowse link 16 10,209,801 10,211,466 RGD:9068941
vitelline membrane formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IHH Indian hedgehog signaling molecule JBrowse link 2B 106,312,472 106,319,124 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12490
    cellular process 11599
      cellular process involved in reproduction in multicellular organism 397
        germ cell development 288
          cystoblast division + 0
          germ-line cyst formation + 0
          germ-line stem cell division + 5
          oocyte development + 62
          oogenesis + 98
          spermatid development + 169
Path 2
Term Annotations click to browse term
  biological_process 12490
    reproduction 1464
      reproductive process 1463
        multi-organism reproductive process 992
          sexual reproduction 791
            gamete generation 643
              germ cell development 288
                cystoblast division + 0
                germ-line cyst formation + 0
                germ-line stem cell division + 5
                oocyte development + 62
                oogenesis + 98
                spermatid development + 169
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.